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Consumption of rice (Oryza sativa L.) is one of the major pathways for heavy metal bioaccumulation in humans over time. Understanding the molecular responses of rice to heavy metal contamination in agriculture is useful for eco-toxicological assessment of cadmium (Cd) and its interaction with zinc (Zn). In certain crops, the impacts of Cd stress or Zn nutrition on the biophysical chemistry and gene expression have been widely investigated, but their molecular interactions at transcriptomic level, particularly in rice roots, are still elusive. Here, hydroponic investigations were carried out with two rice genotypes (Yinni-801 and Heizhan-43), varying in Cd contents in plant tissues to determine their transcriptomic responses upon Cd 15 (15 µM) and Cd 15 +Zn 50 (50 µM) treatments. High throughput RNA-sequencing analysis confirmed that 496 and 2407 DEGs were significantly affected by Cd 15 and Cd 15 +Zn 50 , respectively, among which 1016 DEGs were commonly induced in both genotypes. Multitude of DEGs fell under the category of protein kinases, such as calmodulin (CaM) and calcineurin B-like protein-interacting protein kinases (CBL), indicating a dynamic shift in hormonal signal transduction and Ca 2+ involvement with the onset of treatments. Both genotypes expressed a mutual regulation of transcription factors (TFs) such as WRKY, MYB, NAM, AP2, bHLH and ZFP families under both treatments, whereas genes econding ABC transporters (ABCs), high affinity K + transporters (HAKs) and Glutathione-S-transferases (GSTs), were highly up-regulated under Cd 15 +Zn 50 in both genotypes. Zinc addition triggered more signaling cascades and detoxification related genes in regulation of immunity along with the suppression of Cd-induced DEGs and restriction of Cd uptake. Conclusively, the effective integration of breeding techniques with candidate genes identified in this study as well as economically and technologically viable methods, such as Zn nutrient management, could pave the way for selecting cultivars with promising agronomic qualities and reduced Cd for sustainable rice production., (Copyright © 2021. Published by Elsevier Inc.)

Understanding the physiological and molecular response of crop genotypes could be useful in eco-toxicological evaluation with cadmium (Cd) and could be a strategy to solve heavy metal contamination in agriculture. This study corroborates unique patterns of Cd accumulation and molecular mechanisms adopted by plants to acquire Cd tolerance and counteractive effects of zinc (Zn) against Cd toxicity. Two rice (Oryza sativa) genotypes (Heizhan 43 and Yinni 801) differing in cadmium tolerance and its accumulation in plant tissues were investigated hydroponically using two Cd levels [Cd 10 (10 μM L -1 ) and Cd 15 (15 μM L -1 )] and two Zn levels [Zn 25 (25 μM L -2 ) and Zn 50 (50 μM L -1 )] and their combinations. Cadmium toxicity rendered substantial reduction in plant height, biomass, chlorophyll contents and photosynthesis as compared to the control plants after 15 days of treatment. Supplementation of Zn evidently ameliorated Cd toxicity by minimizing the reduction in plant growth, chlorophyll contents and photosynthetic attributes (Pn, gs, Ci, and Tr). Comparatively, lower accumulation of Cd in Yinni 801 under combined treatments revealed a preferential uptake of Zn in this genotype. A cross-talk among Cd, Zn, Fe, Ca and K correlated with fluctuating gs, Ci and Tr. Both genotypes also differed in morphological alterations of cell membrane, chloroplasts and appearance of enlarged plastoglobuli along with distorted mitochondria. An increased ascorbate peroxidase activity in roots of Yinni 801 presented a defensive strategy. Relative expression of Cd and Zn ion transporter genes also confirmed the genotypic background of phenotypic divergence. The OsLCT1 and OsHMA2 expression was significant in Heizhan 43, indicating possible translocation of Cd from shoot to grains contrary to Yinni 801, which accumulated Cd in shoot and showed stunted growth. Zn supplementation promises tolerance to Cd in Yinni 801 by differential expression of putative genes for Cd translocation with minimum ultrastructural modifications by maintaining physiological functions in contrast to Heizhan 43., (Copyright © 2019 Elsevier Inc. All rights reserved.)

Impact of different biochars supplemented (10% w/w) to promote vermicomposting of sewage sludge (SS) and kitchen waste (KW) mixture (SS + KW, 70:30) was studied on the growth, reproduction and survival of earthworms, and ultimately the quality of vermicompost. Four types of biochar used as secondary material for preincubation (16 days) and vermicomposting (30 days) were: pine tree biochar (PTB), poplar plant biochar (PPB), wetland plant biochar (WPB) and yard waste biochar (YWB). Preincubation and vermicomposting of biomass mixture were undertaken in 60 L and 2 L capacity round-shaped bioreactors, respectively. Samples of biomass undergoing degradation were drawn after every 2 days during preincubation and with 5 days interval during vermicomposting to analyze them for plant nutrients and heavy metals contents. Amendment of vermicompost substrate (SS + KW) with biochars; PTB, PPB, WPB and YWB increased the reproduction rate of earthworms (Eisenia fetida) by 44.6, 53.9, 29.3 and 38.8%, respectively as compared to control (no biochar, NB). There has been significant reduction in total content of Cd (0.2-5.1%), Cr (7.3-10.8%), Cu (3.1-7.4%), Mn (3.2-8.4%), Pb (9.0-45.9%) and Zn (1.1-5.7%) by the application of different biochars as compared to NB after vermicomposting. The SEM/EDS images also reflected reduced concentration of these heavy metals in the final vermicompost as compared to initial mixtures. Progressively, biochar amendments increased the concentration of all macronutrients, viz., TN (15.8-31.0%), TP (8.6-9.9%), TK (2.8-17.3%), Ca (4.1-9.9%) and Mg (0.8-12.2%); while, reduced the pH (1.9-2.3%), content of Na (6.6-22.3%), TOC (6.6-15.4%), OM (5.0-8.2%) and C:N ratio (2.6-18.9%). Earthworm body accumulation factor (BAF) of heavy metals was: Cd > Zn > Pb > Cu > Mn > Cr at the termination stage of experiment. In conclusion, amending the SS + KW mixture with 10% (w/w) PPB for vermicomposting rendered higher count of cocoons, growth rate and reproduction rate of earthworms, which ultimately produce nutrients-rich vermicompost lower in heavy metals., (Copyright © 2019 Elsevier B.V. All rights reserved.)

Magnetotactic bacteria provide an interesting example for the biosynthesis of magnetic (Fe 3 O 4 or Fe 3 S 4 ) nanoparticles, synthesized through a process known as biologically controlled mineralization, resulting in complex monodispersed, and nanostructures with unique magnetic properties. In this work, we report a novel aerobic bacterial strain isolated from sludge of an oil refinery. Microscopic and staining analysis revealed that it was a gram positive rod with the capability to thrive in a medium (9K) supplemented, with Fe 2+ ions at an acidic pH (~3.2). The magnetic behaviour of these cells was tested by their alignment towards a permanent magnet, and later on confirmed by magnetometry analysis. The X-ray diffraction studies proved the cellular biosynthesis of magnetite nanoparticles inside the bacteria. This novel, bio-nano-magnet, could pave the way for green synthesis of magnetic nanoparticles to be used in industrial and medical applications such as MRI, magnetic hyperthermia and ferrofluids., (Copyright © 2017 Elsevier B.V. All rights reserved.)

This study appraised cadmium (Cd) toxicity stress in wetland plant Juncus effusus, and explored its potential for Cd phytoextraction through chelators (citric acid and EDTA). Cadmium altered morphological and physiological attributes of J. effusus as reflected by growth retardation. Citric acid in the presence of 100 μM Cd significantly countered Cd toxicity by improving plant growth. Elevated Cd concentrations reduced translocation factor that was increased under application of both chelators. Citric acid enhanced Cd accumulation, while EDTA reduced its uptake. Cadmium induced oxidative stress modified the antioxidative enzyme activity. Both levels of citric acid (2.5 and 5.0 mM) and lower EDTA concentration (2.5 mM) helped plants to overcome oxidative stress by enhancing their antioxidative enzyme activities. Cadmium damaged the root cells through cytoplasmic shrinkage and metal deposition. Citric acid restored structure and shape of root cells and eliminated plasmolysis; whereas, EDTA exhibited no positive effect on it. Shoot cells remained unaffected under Cd treatment alone or with citric acid except for chloroplast swelling. Only EDTA promoted starch accumulation in chloroplast reflecting its negative impact on cellular structure. It concludes that Cd and EDTA induce structural and morphological damage in J. effusus; while, citric acid ameliorates Cd toxicity stress., (Copyright © 2010 Elsevier B.V. All rights reserved.)

Accelerated eutrophication and nutrient loads in the lakes are of major concern for human health and environment. This study was undertaken for modeling the non-point source pollution of Taihu lake basin in eastern China. The SWAT model having an interface in ArcView GIS was employed. Model sensitive parameters related to hydrology and water quality were obtained by sensitivity analysis, and then calibrated and validated by comparing model predictions with field data. The GIS showed good potential for parameterization of hill-slopes, channels, and representative slope profiles for SWAT model simulations. In a monthly and daily time step, the model's Nash-Sutcliffe coefficient (E) and the coefficient of determination (R(2)) indicated that values of simulated runoff, NH(4)(+)-N and total phosphorus were acceptably closer to the measured data. Surface water parameters especially CN, Soil-AWC and ESCO were the most sensitive and had more recognition in the model. It is concluded that runoff carrying N and P nutrients from chemical fertilizer inputs in agricultural areas is the major contributor to NPSP in the lake basin. So, decrease in excessive use of N and P fertilizers and their synergism with organic manures is recommended that would significantly reduce nutrient pollution in the lake ecosystem.

Chelate-assisted phytoextraction by high biomass producing plant species enhances the removal of heavy metals from polluted environments. In this regard, Juncus effusus a wetland plant has great potential. This study evaluated the effects of elevated levels of manganese (Mn) on the vegetative growth, Mn uptake and antioxidant enzymes in J. effusus. We also studied the role of citric acid and EDTA on improving metal accumulation, plant growth and Mn toxicity stress alleviation. Three-week-old plantlets of J. effusus were subjected to various treatments in the hydroponics as: Mn (50, 100 and 500 microM) alone, Mn (500 microM) + citric acid (5 mM), and Mn (500 microM) + EDTA (5 mM). After 2 weeks of treatment, higher Mn concentrations significantly reduced the plant biomass and height. Both citric acid and EDTA restored the plant height as it was reduced at the highest Mn level. Only the citric acid (but not EDTA) was able to recover the plant biomass weight, which was also obvious from the microscopic visualization of mesophyll cells. There was a concentration dependent increase in Mn uptake in J. effusus plants, and relatively more deposition in roots compared to aerial parts. Although both EDTA and citric acid caused significant increase in Mn accumulation; however, the Mn translocation was enhanced markedly by EDTA. Elevated levels of Mn augmented the oxidative stress, which was evident from changes in the activities of antioxidative enzymes in plant shoots. Raised levels of lipid peroxidation and variable changes in the activities of antioxidant enzymes were recorded under Mn stress. Electron microscopic images revealed several modifications in the plants at cellular and sub-cellular level due to the oxidative damage induced by Mn. Changes in cell shape and size, chloroplast swelling, increased number of plastoglobuli and disruption of thylakoid were noticed. However, these plants showed a high degree of tolerance against Mn toxicity stress, and it removed substantial amounts of Mn from the media. The EDTA best enhanced the Mn uptake and translocation, while citric acid best recovered the plant growth.

A bacterial strain QZ2 was isolated from sludge of anoxic sulfide-oxidizing (ASO) reactor. Based on 16S rDNA sequence analysis and morphology, the isolate was identified as Ochrobactrum sp. QZ2. The strain was facultative chemolithotroph, able of using sulfide to reduce nitrite anaerobically. It produced either elemental sulfur or sulfate as the product of sulfide oxidation, depending on the initial sulfide and nitrite concentrations. The optimum growth pH and temperature for Ochrobactrum sp. QZ2 were found as 6.5-7.0 and 30 degrees C, respectively. The specific growth rate (micro) was found as 0.06 h(-1) with a doubling time of 19.75h; the growth seemed more sensitive to highly alkaline pH. Ochrobactrum sp. QZ2 catalyzed sulfide oxidation to sulfate was more sensitive to sulfide compared with nitrite as indicated by IC(50) values for sulfide and nitrite utilization implying that isolate was relatively more tolerant to nitrite. The comparison of physiology of Ochrobactrum sp. QZ2 with those of other known sulfide-oxidizing bacteria suggested that the present isolate resembled to Ochrobactrum anthropi in its denitrification ability.