Manole, Andreea, Wong, Thomas, Rhee, Amanda, Novak, Sammy, Chin, Shao-Ming, Tsimring, Katya, Paucar, Andres, Williams, April, Newmeyer, Traci Fang, Schafer, Simon T., Rosh, Idan, Kaushik, Susmita, Hoffman, Rene, Chen, Songjie, Wang, Guangwen, Snyder, Michael, Cuervo, Ana Maria, Andrade, Leo, Manor, Uri, and Lee, Kevin
Biallelic mutations in the gene that encodes the enzyme N-glycanase 1 (NGLY1) cause a rare disease with multi-symptomatic features including developmental delay, intellectual disability, neuropathy, and seizures. NGLY1's activity in human neural cells is currently not well understood. To understand how NGLY1 gene loss leads to the specific phenotypes of NGLY1 deficiency, we employed direct conversion of NGLY1 patient-derived induced pluripotent stem cells (iPSCs) to functional cortical neurons. Transcriptomic, proteomic, and functional studies of iPSC-derived neurons lacking NGLY1 function revealed several major cellular processes that were altered, including protein aggregate-clearing functionality, mitochondrial homeostasis, and synaptic dysfunctions. These phenotypes were rescued by introduction of a functional NGLY1 gene and were observed in iPSC-derived mature neurons but not astrocytes. Finally, laser capture microscopy followed by mass spectrometry provided detailed characterization of the composition of protein aggregates specific to NGLY1-deficient neurons. Future studies will harness this knowledge for therapeutic development. [Display omitted] • NGLY1 neurons develop ProteoStat-positive aggregates that can be partially rescued • Profiling protein aggregates unveils links to other neurodegenerative diseases • NGLY1 phenotypes appear to be predominantly observed in neurons Manole et al. employ cutting-edge techniques including laser capture microscopy to scrutinize the protein aggregates accumulating in NGLY1-deficient neurons. Their study unveils a significant enrichment of specific proteins associated with neurodegenerative diseases, providing novel insights into the pathological mechanisms underlying NGLY1 deficiency and shedding light on potential therapeutic targets. [ABSTRACT FROM AUTHOR]