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Abstract: The identification of North Atlantic redfish has been controversial and remains a difficult task due to overlapping of meristic and morphological characters. Here we used nine microsatellite loci to assess the level of genetic differentiation among these species and assess the resolution power of these microsatellite loci for individual assignment-based analyses. Conventional analyses as well as individual Bayesian assignment methods clearly separated the four species of North Atlantic redfish as well as the giant form of Sebastes marinus and the so-called “oceanic” and “deep-sea” types of Sebastes mentella. Locus-by-locus analyses revealed that only five microsatellite loci out of nine used could discriminate the concerned species. The advantage of the Bayesian methods relies in the individual information retrieved. It therefore gave additional information on the interrelationship among species. Indeed, we provide evidence of potential hybridization among species as well as individual misclassification based on morphological identification. We provide a powerful tool to discriminate North Atlantic redfish species, which might be useful for legal issues such as poaching, unintentional harvesting and control label. [Copyright &y& Elsevier]

Genomics provides effective tools to characterize biodiversity, but the full implementation of genomic techniques in practical conservation is still limited. We review some of the main approaches in biodiversity genomics available to conservationists and genomicists. High-quality, long-read sequencing and bioinformatic technologies facilitate genome sequencing and assembly for any species. We summarize how reference genomes, in conjunction with population genomic data, can contribute to biodiversity monitoring, conservation, and restoration efforts. Over the past decade, many initiatives to generate reference genomes spanning the tree of life have emerged worldwide. We call for increased integration of reference genomes and population genomics data into interdisciplinary conservation efforts to fully unlock the potential of genomics in safeguarding global biodiversity. The availability of public genomic resources can greatly assist biodiversity assessment, conservation, and restoration efforts by providing evidence for scientifically informed management decisions. Here we survey the main approaches and applications in biodiversity and conservation genomics, considering practical factors, such as cost, time, prerequisite skills, and current shortcomings of applications. Most approaches perform best in combination with reference genomes from the target species or closely related species. We review case studies to illustrate how reference genomes can facilitate biodiversity research and conservation across the tree of life. We conclude that the time is ripe to view reference genomes as fundamental resources and to integrate their use as a best practice in conservation genomics. [ABSTRACT FROM AUTHOR]

Progress in genome sequencing now enables the large-scale generation of reference genomes. Various international initiatives aim to generate reference genomes representing global biodiversity. These genomes provide unique insights into genomic diversity and architecture, thereby enabling comprehensive analyses of population and functional genomics, and are expected to revolutionize conservation genomics. [ABSTRACT FROM AUTHOR]

Homing and site fidelity of Atlantic wolffish Anarhichas lupus was studied at the main spawning ground and four different feeding grounds in Icelandic waters. A total of 883 fish were tagged with T-bar anchor tags, whereof 349 fish also received an internally implanted data storage tag (DST). The DSTs data revealed consistent year-to-year migrations between spawning grounds and feeding grounds. Arrival time at the main spawning ground was similar for males and females, but males departed two months later, suggesting that peak of hatching of larvae was in late February. Homing was estimated to be 93% for the main spawning ground and 87% for feeding grounds. Fish tagged at the main spawning ground did not exclusively migrate to one feeding ground during the feeding season, and fish tagged at each feeding ground migrated to more than one potential spawning ground. Fish tagged at the southeast feeding ground appear to be isolated from the other areas investigated. Atlantic wolffish in Icelandic waters is currently managed as one single stock, hence the single stock management approach might need to be reconsidered. [ABSTRACT FROM AUTHOR]

Biological data were retrieved from 3694 female Atlantic wolffish Anarhichas lupus collected in Icelandic waters at four locations during the breeding season using a long–term study spanning from 2002 to 2013. The main objective was to investigate reproduction investment and timing. In the main spawning ground, little temporal differences were observed. In contrast, the peak of the spawning season was different among spawning grounds, suggesting spatial differences in the timing of reproduction. The size of females A. lupus was related to the spawning time with the larger fish spawning earlier than smaller ones. In addition, no significant pattern was found between temperature and spawning time. Except at its main spawning area where spawning begins in late September, spawning usually began in late August or beginning of September and was completed in early November. [ABSTRACT FROM AUTHOR]

• Logbook data were analyzed to assess the migration route and timing of capelin. • Centre of gravity of weekly catches over 26 years showed spatio-temporal differences. • Logbook data can assist in assessing migration route and timing of small pelagic fish. Migration routes of exploited marine resources are often investigated using tracking methods such as satellite tags or Data Storage Tags (DSTs). However, this type of research crucially depends on the tagging and recapture effort, and is often unfeasible for small migratory pelagic fish such as capelin because of size constraints. We investigated the spawning migration route of capelin along the shelf break from the north and east of Iceland to spawning grounds located south and west of Iceland using catch data. Fishing vessels usually follow the front of the capelin migration as soon as it appears in fishable concentrations at the beginning of the year. This provides a good opportunity to assess the reliability of the catch data to assess the migration path of this species. The results show that capelin fishery starts in the first week of January along the Icelandic shelf and gradually moves towards the southern area in a clockwise manner, which is reflected in the fleet behavior. In addition, by analyzing catches for two different time periods encompassing more than two decades, we were able to detect slight changes in the timing and route of the capelin migration. We argue that in the case of small migratory pelagic fish, logbook data could be used to assess migration route and timing and its changes over time. [ABSTRACT FROM AUTHOR]