1. Comparative effects of diet and carcinogen on microRNA expression in the stem cell niche of the mouse colonic crypt
- Author
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Eun Joo Kim, Jason Knight, Jennifer S. Goldsby, Laurie A. Davidson, Ivan Ivanov, Robert S. Chapkin, Beyian Zhou, Manasvi S. Shah, Roger S. Zoh, and Evelyn S. Callaway
- Subjects
0301 basic medicine ,Colon ,Cellular differentiation ,Colon stem cells ,Butyrate ,Biology ,Bioinformatics ,Chemoprevention ,Article ,Lgr5 ,03 medical and health sciences ,Mice ,Transcription Factor 4 ,Intestinal mucosa ,microRNA ,Fatty Acids, Omega-3 ,Animals ,Humans ,Stem Cell Niche ,Molecular Biology ,Carcinogen ,LGR5 ,MicroRNA ,Protective Factors ,HCT116 Cells ,Colon cancer ,Cyclic Nucleotide Phosphodiesterases, Type 4 ,Diet ,Gene Expression Regulation, Neoplastic ,MicroRNAs ,030104 developmental biology ,Focal Adhesion Kinase 2 ,Colonic Neoplasms ,Cancer research ,Carcinogens ,Molecular Medicine ,Stem cell ,Adult stem cell - Abstract
There is mounting evidence that noncoding microRNAs (miRNA) are modulated by select chemoprotective dietary agents. For example, recently we demonstrated that the unique combination of dietary fish oil (containing n-3 fatty acids) plus pectin (fermented to butyrate in the colon) (FPA) up-regulates a subset of putative tumor suppressor miRNAs in intestinal mucosa, and down-regulates their predicted target genes following carcinogen exposure as compared to control (corn oil plus cellulose (CCA)) diet. To further elucidate the biological effects of diet and carcinogen modulated miR's in the colon, we verified that miR-26b and miR-203 directly target PDE4B and TCF4, respectively. Since perturbations in adult stem cell dynamics are generally believed to represent an early step in colon tumorigenesis and to better understand how the colonic stem cell population responds to environmental factors such as diet and carcinogen, we additionally determined the effects of the chemoprotective FPA diet on miRNAs and mRNAs in colonic stem cells obtained from Lgr5-EGFP-IRES-creER(T2) knock-in mice. Following global miRNA profiling, 26 miRNAs (P
- Published
- 2016
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