14 results on '"Jonathan Lopez"'
Search Results
2. Cracking the homologous recombination deficiency code: how to identify responders to PARP inhibitors
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Lola Paulet, Alexis Trecourt, Alexandra Leary, Julien Peron, Françoise Descotes, Mojgan Devouassoux-Shisheboran, Karen Leroy, Benoit You, and Jonathan Lopez
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Ovarian Neoplasms ,Cancer Research ,DNA Repair ,Oncology ,Humans ,Female ,Carcinoma, Ovarian Epithelial ,Poly(ADP-ribose) Polymerase Inhibitors ,Homologous Recombination - Abstract
DNA double-strand breaks are the most critical DNA damage to cells, and their repair is tightly regulated to maintain cellular integrity. Some cancers exhibit homologous recombination deficiency (HRD), a faithful double-strand break repair system, making them more sensitive to poly (ADP ribose) polymerase inhibitors (PARPi). PARPi have shown substantial efficacy in BRCA-mutated ovarian cancer for several years, and their indication has gradually been extended to other tumour locations such as breast, prostate and pancreas. More recently, PARPi were demonstrated to be effective in cancers with an HRD phenotype beyond BRCA mutations. Today, a major challenge is developing tests capable of detecting the HRD phenotype of cancers (HRD tests) and predicting sensitivity to PARPi to select patients likely to benefit from this therapy. This review provides a synthesis of the existing HRD tests, divided into three main approaches to detect HRD: the investigation of the HRD causes, the study of its consequences and the evaluation of the HR activity itself.
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- 2022
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3. Carcinome papillaire de la thyroïde à cellules en clous de tapissier
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Jonathan Lopez, M. Decaussin-Petrucci, Vanessa Da Cruz, and Jean Christophe Lifante
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0301 basic medicine ,business.industry ,Thyroid ,Distant metastasis ,Pathology and Forensic Medicine ,Thyroid carcinoma ,BRAF V600E ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Mutation (genetic algorithm) ,Cell polarity ,Cancer research ,Medicine ,business ,Pathological ,Lymph node - Abstract
We report the case of a hobnail variant of papillary thyroid carcinoma revealed by a cervical mass in a 67 years-old patient. This new entity in the 2017 WHO classification is rare. Histopathological diagnosis is based on four main criteria, present in≥30% of tumor cells: a discohesive tumor, micropapillary structures and loss of cell polarity and hobnail cells. This tumor expresses markers of thyroid differentiation. The most widely described molecular alteration is BRAF V600E mutation associated with other alterations, especially p53 mutations. This reflects the agressivness of this variant. It is important to recognize the hobnail variant of papillary thyroid carcinoma and to specify it in the pathological report because of its more pejorative prognosis, with local invasion, lymph node and distant metastasis, and deacreased survival. No specific management is recommended, but a close follow up seems necessary.
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- 2021
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4. Transcriptomic and immunohistochemical approaches identify HLA-G as a predictive biomarker of gestational choriocarcinoma resistance to monochemotherapy
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Fabienne Allias, Benoit You, Touria Hajri, Mojgan Devouassoux-Shisheboran, François Mallet, François Golfier, Jérôme Massardier, Sophie Patrier, Jonathan Lopez, Pierre-Adrien Bolze, Physiopathologie de l'immunodépression associée aux réponses inflammatoires systémiques - EA 7426 (PI3), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon, Centre Hospitalier Lyon Sud [CHU - HCL] (CHLS), Hospices Civils de Lyon (HCL), BIOMERIEUX, Université de Lyon, Centre de Recherche en Cancérologie de Lyon (UNICANCER/CRCL), Centre Léon Bérard [Lyon]-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Département de Pathologie [CHU Rouen], CHU Rouen, Normandie Université (NU)-Normandie Université (NU)-Université de Rouen Normandie (UNIROUEN), Normandie Université (NU), Service de gynécologie obstétrique, Hôpital Femme Mère Enfant [CHU - HCL] (HFME), Hospices Civils de Lyon (HCL)-Hospices Civils de Lyon (HCL), and CCSD, Accord Elsevier
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0301 basic medicine ,[SDV]Life Sciences [q-bio] ,HLA-G ,Gestational choriocarcinoma ,Malignant transformation ,0302 clinical medicine ,Pregnancy ,Antineoplastic Combined Chemotherapy Protocols ,Choriocarcinoma ,reproductive and urinary physiology ,Etoposide ,Gestational trophoblastic neoplasia ,Obstetrics and Gynecology ,Hydatidiform Mole ,Middle Aged ,Immunohistochemistry ,female genital diseases and pregnancy complications ,3. Good health ,[SDV] Life Sciences [q-bio] ,Oncology ,030220 oncology & carcinogenesis ,Uterine Neoplasms ,embryonic structures ,Female ,Chemoresistance ,medicine.drug ,Adult ,Vincristine ,Cyclophosphamide ,Antineoplastic Agents ,Young Adult ,03 medical and health sciences ,Predictive Value of Tests ,Biomarkers, Tumor ,medicine ,Humans ,HLA-G Antigens ,business.industry ,Hydatidiform moles ,medicine.disease ,Methotrexate ,030104 developmental biology ,Drug Resistance, Neoplasm ,Cancer research ,Transcriptome ,business - Abstract
International audience; Objective: Using a transcriptional approach on tissue samples, we sought to identify predictive biomarkers of post molar malignant transformation, and of choriocarcinoma chemosensitivity to mono- (methotrexate or actinomycin D) or polychemotherapy [EMA(Etoposide, Methotrexate, Actinomycin D)-CO(Cyclophosphamide, Vincristine) and EMA-EP(Etoposide, Cisplatine)] regimens.Methods: We studied the expression of a 760-gene panel (PanCancer Pathway) related to oncogenesis and immune tolerance in tissue samples of complete hydatidiform moles and gestational choriocarcinoma.Results: We did not identify any differentially expressed gene between moles with post molar malignant transformation in choriocarcinoma (n = 14) and moles with remission (n = 20). In monochemoresistant choriocarcinoma (n = 34), four genes (HLA-G, COL27A1, IL1R2 and GLI3) had a significantly reduced expression and one (THEM4) had an increased expression [FDR (false discovery rate) adjusted p-value ≤ 0.05] when compared to monochemosensitive choriocarcinoma (n = 9). The proportion of trophoblast cells and the intensity of immunohistochemical HLA-G expression were reduced in monochemoresistant choriocarcinoma (p < 0.05). In polychemoresistant choriocarcinoma (n = 20) we did not identify differentially expressed genes with an FDR adjusted p-value ≤ 0.05 when compared to polychemosensitive choriocarcinoma (n = 15). Gene pathway analysis revealed a predicted activation of IFN ᵞ in monochemoresistant choriocarcinoma and inhibited IL2 and TNF in polychemoresistant choriocarcinoma. The main biological functions predicted to be altered in chemoresistant choriocarcinoma were related to immunological homeostasis and leukopoiesis.Conclusion: HLA-G is a strong candidate gene to predict choriocarcinoma resistance to monochemotherapy and that further studies are required to implement its routine quantification in the decision process for the management of gestational choriocarcinoma.
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- 2020
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5. And follow-up in the center of reference of neurological diseases in the Colombian Caribbean (February 2015 to June 2017)
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López, Sandra Jurado, primary, Montaño, Juan, additional, Bedoya, Jaime Osorio, additional, Camargo, Luis Barranco, additional, Caraballo, Carmen Zabala, additional, Garcia, Jonathan Lopez, additional, Cardona, Giancarlos Conde, additional, Tamara, Edgard Castillo, additional, Zambrano, Martin Torres, additional, Agámez, Eduardo Usta, additional, and Clason, Enrique Ramos, additional
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- 2021
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6. Carcinome papillaire thyroïdien variante solide/trabéculaire avec mutation DICER1 chez une enfant de 11 ans
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Françoise Descotes, Lucie Ravella, Jonathan Lopez, Myriam Decaussin-Petrucci, Jean-Christophe Lifante, and Catherine David
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0301 basic medicine ,Pathology ,medicine.medical_specialty ,endocrine system diseases ,business.industry ,Thyroid ,medicine.disease ,Germline ,Pathology and Forensic Medicine ,Thyroid carcinoma ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Germline mutation ,Poorly Differentiated Thyroid Carcinoma ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Medicine ,Differential diagnosis ,business ,Thyroid cancer ,DICER1 Syndrome - Abstract
We report the case of an 11-year-old patient diagnosed with a solid variant of papillary thyroid carcinoma. Papillary thyroid carcinoma (PTC) is the most common thyroid cancer, representing 80-90% of all newly diagnosed thyroid cancers. Among the many variants described, solid/trabecular variant of papillary thyroid carcinoma is a rare entity and account for 3% of thyroid cancers. It is more common in children and young adults, and it is seen in higher proportion in post radiation papillary thyroid carcinoma cases. Histologically, solid variant papillary carcinoma is characterized by a predominantly solid, trabecular or insular growth pattern, and the presence of cytological features typical of PTC. Its main differential diagnosis is poorly differentiated thyroid carcinoma. It has a less favorable prognosis than the classical papillary type, with a higher risk of distant metastasis, extrathyroidal extension and lympho-vascular invasion. It is associated with a slightly lower long-term survival in adult cases, but not in children. The management of solid variant PTC includes surgery, associated or not with postoperative radioiodine ablation, according to the aggressiveness criteria. Our patient had a DICER1 somatic mutation. Carriers of germline DICER1 mutations are predisposed to a rare cancer syndrome, the DICER1 syndrome, with a higher risk of numerous tumors and infrequently differentiated thyroid carcinomas.
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- 2018
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7. And follow-up in the center of reference of neurological diseases in the Colombian Caribbean (February 2015 to June 2017)
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Enrique Ramos Clason, Luis Barranco Camargo, Martín Torres Zambrano, Giancarlos Conde Cardona, Jaime Osorio Bedoya, Jonathan Lopez Garcia, Sandra Jurado López, Carmen Zabala Caraballo, Juan Montaño, Edgard Castillo Tamara, and Eduardo Usta Agámez
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medicine.medical_specialty ,Neurology ,business.industry ,General surgery ,Medicine ,Center (algebra and category theory) ,Neurology (clinical) ,business - Published
- 2021
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8. Malignant Vasovagal Syncope
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Jonathan Lopez and Gayana Grigoryan
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medicine.medical_specialty ,business.industry ,Internal medicine ,Emergency Medicine ,medicine ,Cardiology ,business ,medicine.disease ,Vasovagal syncope - Published
- 2018
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9. 3102 – A SYNTHETIC LETHALITY APPROACH TO ERADICATE AML VIA SYNERGISTIC ACTIVATION OF PRO-APOPTOTIC P53 BY MDM2 AND BET INHIBITORS
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Sha Li, Anne-Louise Latif, Ashley Newcombe, Kathryn Gilrory, Neil Robertson, Darren Finlay, Xue Lei, Helen Stewart, Karina Barbosa, John Cole, Maria Terradas Terradas, Loveena Rishi, Lynn McGarry, Claire McKeeve, Claire Reid, William Clark, Joana Campos, Kristina Kirschner, Jonathan Lopez, Jun-Ichi Sakamaki, Jennifer Morton, Kevin Ryan, Stephen Tait, Sheela Abraham, Tessa Holyoake, Brian Higgins, Xu Huang, Mhairi Copland, Tim Chevassut, Ani Deshpande, Karen Keeshan, and Peter Adams
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Cancer Research ,Genetics ,Cell Biology ,Hematology ,Molecular Biology - Published
- 2020
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10. Lie algebras and cohomology of congruence subgroups for
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Jonathan Lopez
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Combinatorics ,Algebra and Number Theory ,Group (mathematics) ,Lie algebra ,Special linear group ,Congruence (manifolds) ,Commutative ring ,Abelian group ,Cohomology ,Mathematics ,Congruence subgroup - Abstract
Let R be a commutative ring that is free of rank k as an abelian group, p a prime, and S L n ( R ) the special linear group. We show that the Lie algebra associated to the filtration of S L n ( R ) by p -congruence subgroups is isomorphic to the tensor product s l n ( R ⊗ Z Z / p ) ⊗ F p t F p [ t ] , the Lie algebra of polynomials with zero constant term and coefficients n × n traceless matrices with entries polynomials in k variables over F p . We also use the underlying group structure to obtain several homological results. For example, we compute the first homology group of the level p -congruence subgroup for n ≥ 3 . We show that the cohomology groups of the level p r -congruence subgroup are not finitely generated for n = 2 and R = Z [ t ] . Finally, we show that for n = 2 and R = Z [ i ] (the Gaussian integers) the second cohomology group of the level p r -congruence subgroup has dimension at least two as an F p -vector space.
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- 2014
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11. New approach for measurement of non-SHBG-bound testosterone in human plasma
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Jonathan Lopez, Véronique Raverot, Michel Pugeat, Henri Déchaud, and C. Grenot
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Male ,Ammonium sulfate ,Globulin ,medicine.drug_class ,Radioimmunoassay ,Monoclonal antibody ,Biochemistry ,Analytical Chemistry ,Magnetics ,chemistry.chemical_compound ,Sex Hormone-Binding Globulin ,polycyclic compounds ,medicine ,Humans ,Environmental Chemistry ,Testosterone ,Peptide-mass fingerprint ,reproductive and urinary physiology ,Spectroscopy ,Ammonium sulfate precipitation ,Chromatography ,biology ,medicine.diagnostic_test ,Albumin ,Antibodies, Monoclonal ,chemistry ,Ammonium Sulfate ,Immunoassay ,biology.protein ,Female ,Antibodies, Immobilized ,hormones, hormone substitutes, and hormone antagonists ,Protein Binding - Abstract
Testosterone (T) circulates in the blood tightly bound to sex hormone-binding globulin (SHBG) and weakly to albumin. Measuring protein unbound T (free) or non-SHBG-bound T rather than total T has been recommended for the evaluation of androgen disorders in humans. Ammonium sulfate precipitation has been widely used to separate [SHBG-T] complex from free and albumin-bound T. To achieve more specificity in this separation, we used monoclonal anti-SHBG antibody and developed a suitable and convenient immunoassay for measuring non-SHBG-bound T. Magnetic beads were covalently coupled to a monoclonal anti-SHBG antibody to capture [SHBG-T] complex from plasma samples. Magnetic separation was then performed to allow measurement of non-SHBG-bound T in the supernatant by direct radioimmunoassay. When 300 microL of plasma samples were incubated at room temperature with 10 microL of anti-SHBG beads, residual SHBG concentration was undetectable in the supernatant. The specificity of proteins retained on anti-SHBG beads was further demonstrated by peptide mass fingerprint on a MALDI-TOF analyzer. The non-specific adsorption of T on beads was low (5%), and dissociation of T from SHBG-T complex was less than 5% after 180 min of incubation. The plasma concentrations of non-SHBG-bound T using anti-SHBG beads were highly correlated to those obtained using ammonium sulfate precipitation. We conclude that SHBG immunocapture is a highly specific and useful tool for an experimental direct measurement of plasma non-SHBG-bound T. This methodology is also convenient and appropriate for routine and automated assay.
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- 2010
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12. Mutation profiling of thyroid liquid-based fine needle aspirations improves diagnostic accuracy
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Jonathan Lopez, J.C. Lifante, Marie-Laure Denier, Françoise Descotes, Myriam Decaussin-Petrucci, Véronique Lapras, and Lauriane Depaepe
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Thyroid nodules ,Neuroblastoma RAS viral oncogene homolog ,Pathology ,medicine.medical_specialty ,Suspicious for Malignancy ,medicine.diagnostic_test ,business.industry ,Thyroid ,medicine.disease ,Pathology and Forensic Medicine ,medicine.anatomical_structure ,Fine-needle aspiration ,Mutation (genetic algorithm) ,medicine ,Cancer research ,Atypia ,HRAS ,skin and connective tissue diseases ,business ,neoplasms - Abstract
Fine needle aspiration (FNA) is widely recognized as a reliable diagnostic method to evaluate thyroid nodules. Recently use of molecular biomarkers was proposed to improve pathologic accuracy. We evaluated feasibility and performance of molecular analysis in liquid-based FNA (LB-FNA) with indeterminate cytology. Mutation profiling of NRAS, HRAS and BRAF was performed on residual material from LB-FNA of 215 cases including 83 atypia of undetermined significance (AUS), 72 follicular neoplasms (FN), 46 suspicious for malignancy (SM), and 14 malignant (M). Forty-eight (22%) cases were mutated. Twenty-four cases presented a RAS mutation (19 NRAS and 5 HRAS) (11 AUS, 6 FN, and 7 SM) and 24 were carrying a BRAF mutation (1FN, 11 SM, and 12M). Surgical samples were available for 38 cases: 3 AUS, 14 FN, 13 SM and 8M. In the AUS category, 1 was a papillary carcinoma (PC) with NRAS mutation and 2 were benign (1 with NRAS mutation). In the FN category, 3 were malignant (1 with BRAF and 1 with HRAS mutation) and 11 benign (1 with HRAS and 1 with NRAS mutation). In the SM group, 10 were PC (3 with NRAS mutation and 5 with BRAF mutation) and 3 benign (no mutation). In the M group, all were PC with BRAF mutation. In conclusion, mutation profiling of BRAF and RAS can be successfully performed on residual material of thyroid LB-FNA and could improve the diagnostic accuracy of FNA.
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- 2014
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13. The Eyes Have It! The Significance of Unilateral Ptosis
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Paul G. Fisher and Jonathan Lopez
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medicine.medical_specialty ,Horner Syndrome ,business.industry ,MEDLINE ,Surgery ,Pediatrics, Perinatology and Child Health ,Blepharoptosis ,Humans ,Medicine ,Female ,Child ,business ,Spinal Cord Injuries ,Unilateral ptosis - Published
- 2012
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14. 74: Development of a novel membrane-active peptide with apoptosis-inducing activity and potent anticancer effect
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Jérôme Kucharczak, Lucie Sancey, Jesús Salgado, Jean-Luc Coll, Aouacheria Abdel, Juan Garcia Valero, Abdel Aouacheri, Jonathan Lopez, and Yannis Guillemin
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chemistry.chemical_classification ,Cancer Research ,Membrane ,Oncology ,chemistry ,Apoptosis ,Radiology, Nuclear Medicine and imaging ,Peptide ,Hematology ,General Medicine ,Cell biology - Published
- 2010
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