1. Chromatin accessibility governs the differential response of cancer and T cells to arginine starvation
- Author
-
Paresh Vyas, Uzi Gileadi, Vincenzo Cerundolo, Giorgio Napolitani, Lars Rønn Olsen, I-Jun Lau, Thomas A. Milne, Nicholas T. Crump, Hashem Koohy, Zhanru Yu, Benedikt M. Kessler, Erica Ballabio, Ji-Li Chen, John Walsby-Tickle, Mariolina Salio, Andreas V. Hadjinicolaou, Lynn Quek, Mike Bogetofte Barnkob, James S. O. McCullagh, Meng Xia, Laura Godfrey, Mashiko Setshedi, and Stephen Taylor
- Subjects
0301 basic medicine ,Arginine ,H3K27me3 ,T-Lymphocytes ,T cell ,immunometabolism ,cancer metabolism ,Nutritional stress ,arginine ,ASS1 ,Article ,General Biochemistry, Genetics and Molecular Biology ,Chromatin remodeling ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,SDG 3 - Good Health and Well-being ,Metabolic regulation ,Neoplasms ,Histone methylation ,medicine ,Animals ,Humans ,ATF4 ,Immune Evasion ,Immunometabolism ,immunosuppression ,Chemistry ,Cancer metabolism ,Chromatin ,Cell biology ,Arginase ,030104 developmental biology ,medicine.anatomical_structure ,nutritional stress ,Cancer cell ,metabolic regulation ,T cell chromatin ,Immunosuppression ,030217 neurology & neurosurgery - Abstract
Summary Depleting the microenvironment of important nutrients such as arginine is a key strategy for immune evasion by cancer cells. Many tumors overexpress arginase, but it is unclear how these cancers, but not T cells, tolerate arginine depletion. In this study, we show that tumor cells synthesize arginine from citrulline by upregulating argininosuccinate synthetase 1 (ASS1). Under arginine starvation, ASS1 transcription is induced by ATF4 and CEBPβ binding to an enhancer within ASS1. T cells cannot induce ASS1, despite the presence of active ATF4 and CEBPβ, as the gene is repressed. Arginine starvation drives global chromatin compaction and repressive histone methylation, which disrupts ATF4/CEBPβ binding and target gene transcription. We find that T cell activation is impaired in arginine-depleted conditions, with significant metabolic perturbation linked to incomplete chromatin remodeling and misregulation of key genes. Our results highlight a T cell behavior mediated by nutritional stress, exploited by cancer cells to enable pathological immune evasion., Graphical abstract, Highlights • Arginine starvation induces ASS1 expression in some cancers but not in T cells • ATF4 binds an internal ASS1 enhancer to drive expression in cancer but not T cells • T cell activation is disrupted by arginine starvation, with a loss of reprogramming • Arginine starvation compacts chromatin in T cells, disrupting ATF4 binding, Arginine depletion by many tumors generates an immunosuppressive microenvironment. Crump et al. show that cancer cells can tolerate this by inducing ATF4-dependent upregulation of ASS1, allowing de novo arginine synthesis. T cells are unable to synthesize arginine as ASS1 is repressed, disrupting T cell function and the chromatin remodeling associated with activation.
- Published
- 2021
- Full Text
- View/download PDF