Search

Predicting oral bioavailability (Foral) is of importance for estimating systemic exposure of orally administered drugs. Physiologically-based pharmacokinetic (PBPK) modelling and simulation have been applied extensively in biopharmaceutics recently. The Oral Biopharmaceutical Tools (OrBiTo) project (Innovative Medicines Initiative) aims to develop and improve upon biopharmaceutical tools, including PBPK absorption models. A large-scale evaluation of PBPK models may be considered the first step. Here we characterise the OrBiTo active pharmaceutical ingredient (API) database for use in a large-scale simulation study.The OrBiTo database comprised 83 APIs and 1475 study arms. The database displayed a median logP of 3.60 (2.40–4.58), human blood-to-plasma ratio of 0.62 (0.57–0.71), and fraction unbound in plasma of 0.05 (0.01–0.17). The database mainly consisted of basic compounds (48.19%) and Biopharmaceutics Classification System class II compounds (55.81%). Median human intravenous clearance was 16.9 L/h (interquartile range: 11.6–43.6 L/h; n = 23), volume of distribution was 80.8 L (54.5–239 L; n = 23). The majority of oral formulations were immediate release (IR: 87.6%). Human Foral displayed a median of 0.415 (0.203–0.724; n = 22) for IR formulations.The OrBiTo database was found to be largely representative of previously published datasets. 43 of the APIs were found to satisfy the minimum inclusion criteria for the simulation exercise, and many of these have significant gaps of other key parameters, which could potentially impact the interpretability of the simulation outcome. However, the OrBiTo simulation exercise represents a unique opportunity to perform a large-scale evaluation of the PBPK approach to predicting oral biopharmaceutics.

Filoviridae currently includes five official and one proposed genera. Genus Ebolavirus includes five established and one proposed ebolavirus species for Bombali virus (BOMV), Bundibugyo virus (BDBV), Ebola virus (EBOV), Reston virus (RESTV), Sudan virus (SUDV) and Tai Forest virus (TAFV), and genus Marburgvirus includes a single species for Marburg virus (MARV) and Ravn virus (RAVV). Ebola virus (EBOV) has emerged as a significant public health concern since the 2013-2016 Ebola Virus Disease outbreak in Western Africa. Currently, there are no therapeutics approved and the need for Ebola-specific therapeutics remains a gap. In search for anti-Ebola therapies we tested the idea of using inhibitory properties of peptides corresponding to the C-terminal heptad-repeat (HR2) domains of class I fusion proteins against EBOV infection. The fusion protein GP2 of EBOV belongs to class I, suggesting that a similar strategy to HIV may be applied to inhibit EBOV infection. The serum half-life of peptides was expanded by cholesterol conjugation to allow daily dosing. The peptides were further constrained to stabilize a helical structure to increase the potency of inhibition. The EC50s of lead peptides were in low micromolar range, as determined by a high-content imaging test of EBOV-infected cells. Lead peptides were tested in an EBOV lethal mouse model and efficacy of the peptides were determined following twice-daily administration of peptides for 9 days. The most potent peptide was able to protect mice from lethal challenge of mouse-adapted Ebola virus. These data show that engineered peptides coupled with cholesterol can inhibit viral production, protect mice against lethal EBOV infection, and may be used to build novel therapeutics against EBOV.

The ability to extrapolate dosage performance from in vitro to in vivo situations has an important role in early drug development. In parallel, the Beagle dog has come to represent a useful animal model for extrapolation to humans especially when drugs formulated for humans are to be tested. In this article, the pentagastrin-induced Beagle dog model was validated internally to show that in the colony the dogs were generally responsive to known doses of pentagastrin that produces effects similar to gastrin in the stomach, i.e., increasing gastric acid production and lowering gastric pH. The effect was observed with a short time course, maximum pH lowering was observed between 0.5 and 1h with return to baseline at 2-4h. The dog stomach pH is a better representative of the human fasted stomach with this pretreatment. The ultimate goal was to use these animals in a food effect studies to predict the behavior of formulations in humans. The results for 4 compounds were provided in the dog and a clear relationship between the effect of food in the dog and the effect of food in humans was observed. While the directionality (positive or negative) of the effect could be adequately predicted, the extent of the effect could not be predicted for all the tested formulations of the 4 compounds. The data will be used to generate a database of known compounds from which a correlation can be drawn to make future predictions using the pentagastrin dog model.

To improve the Grid infrastructure's efficiency, the co-reservation of distributed resources is often required. Therefore, Grid applications need to move large amounts of data between these resources within deterministic time frames. In most cases it is possible to specify the volume and the deadline in advance. This paper proposes an approach for data-movement management and bandwidth reservation in Grid, which provides a high acceptance probability of flows in the network while maintaining efficient network-resource utilization. To achieve this, our proposal combines explicit admission control and high-speed transport protocols to enable an opportunistic sharing of the capacity by flows having heterogeneous bandwidth and delay requirements. We formulate the problem and discuss several objective functions. Then we present different heuristics and evaluate them according to the request's acceptance rate and the network's utilization metrics. Our simulations include all the communication and computation overheads which are involved in such data transfers.

Grids generally rely on a complex interconnection of Internet Protocol (IP) domains that offer heterogeneous services and unpredictable performance characteristics, particularly at the local area network/wide area network boundary. The total lack of end-to-end resource control in IP networks is responsible for performance problems that may affect the whole Grid environment. An end-to-end service differentiation architecture that controls heterogeneous communication performance is thus needed. We propose the Equivalent Differentiated Services (EDS) architecture, based on a layer-4 service differentiation solution exploiting a new layer-3 relative DiffServ model. In this paper, we present the EDS packet forwarding principles, the router mechanisms and two adaptive packet marking algorithms. As a proof of concept, we have implemented the EDS architecture in Linux and performed experiments on a transoceanic testbed.

While active networks provide new solutions for the deployment of dynamic services in the network, exposing network processing resources, logistical networking focuses on exposing storage resources inside networks, optimizing the global scheduling of data transport, data storage and computation. In this paper, we show how active and logistical environments working together can improve grid middleware, and provide new and innovative high-level services for grid applications. We have experimented with this approach by combining the Internet Backplane Protocol suite with the Tamanoir Active Node environment. Our target architecture is the French e-Toile Grid infrastructure based on a high performance backbone (Vraiment Tres Haut Debit, VTHD).

This paper presents an overview of the high performance Grid networking activities in the DataGRID project. We examine the main issues raised at network level by the design and the development of a large-scale Grid Testbed. We present the application requirement studies, the underlying network infrastructure and the initial network monitoring architecture that is under development in the context of the project.

A high-performance liquid chromatographic method with solid-phase extraction was developed for the assay of the enantiomers of a novel 20,21-dinoreburnamenine derivative (RU 49041) in rat plasma and brain using a chiral stationary phase (Nucleosil Chiral 2) and ultraviolet detection. The limit of detection was 10 ng/ml (or ng/g) in both tissues and the intra-assay precision was satisfactory (plasma, ca. 5%; brain, ca. 1%). The pharmacokinetic profiles of the two enantiomers were determined following oral administration of the racemate (10 mg/kg). The results show that their pharmacokinetics are very different: whereas both enantiomers appear in the brain, only the 3α,16β-enantiomer is detected in plasma.