1. In silico analyses of the effects of a point mutation and a pharmacological chaperone on the thermal fluctuation of phenylalanine hydroxylase
- Author
-
Izumi Nakagome, Shin-ichiro Ozawa, Noriyuki Yamaotsu, Daichi Hayakawa, Shuichi Hirono, and Tomoki Yoshida
- Subjects
0301 basic medicine ,Protein Folding ,Phenylalanine hydroxylase ,In silico ,education ,Mutant ,Biophysics ,Pyrimidinones ,Molecular Dynamics Simulation ,Crystallography, X-Ray ,medicine.disease_cause ,behavioral disciplines and activities ,Biochemistry ,03 medical and health sciences ,Catalytic Domain ,medicine ,Point Mutation ,chemistry.chemical_classification ,Mutation ,Binding Sites ,biology ,Point mutation ,Organic Chemistry ,Temperature ,Phenylalanine Hydroxylase ,Pharmacological chaperone ,030104 developmental biology ,Enzyme ,chemistry ,biology.protein ,Phenylalanine metabolism ,medicine.drug - Abstract
Phenylketonuria (PKU) is an inborn error of phenylalanine metabolism due to mutations in phenylalanine hydroxylase (PAH). Recently, small compounds, known as pharmacological chaperones (PhCs), have been identified that restore the enzymatic activity of mutant PAHs. Understanding the mechanism of the reduction in enzymatic activity due to a point mutation in PAH and its restoration by PhC binding is important for the design of more effective PhC drugs. Thermal fluctuations of an enzyme can alter its activity. Here, molecular dynamics simulation show the thermal fluctuation of PAH is increased by introduction of the A313T mutation. Moreover, a simulation using the A313T-PhC complex model was also performed. Thermal fluctuation of the mutant was found to be reduced upon PhC binding, which contributes to restoring its enzymatic activity.
- Published
- 2017
- Full Text
- View/download PDF