Search

The metagenomic data presented in this article are related to the published research of "A Placebo-controlled doubleblinded test of the biodiversity hypothesis of immunemediated diseases: Environmental microbial diversity elicits changes in cytokines and increase in T regulatory cells in young children"This database contains 16S ribosomal RNA (rRNA) metagenomics of sandbox sand and skin and gut microbiota of children in the intervention and placebo daycares. In inter-vention daycares, children aged 3-5 years were exposed to playground sand enriched with microbially diverse soil. In placebo daycares, children were exposed to visually similar as in intervention daycares, but microbially poor sand col-ored with peat. Sand, skin and gut metagenomics were an-alyzed at baseline and after 14 and 28 days of interven-tion by high throughput sequencing of bacterial 16S rRNA gene on the Illumina MiSeq platform. This dataset shows how skin bacterial community composition, including classes Gammaproteobacteria and Bacilli, changed, and how the rel-ative abundance of over 30 bacterial genera shifted on the skin of children in the intervention treatment, while no shifts occurred in the placebo group.(c) 2023 The Author(s). Published by Elsevier Inc. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/)

It is often stated that plants remove air pollutants from the urban atmosphere with their large leaf area, thus providing benefits − i.e. ecosystem services − for citizens. However, empirical evidence showing that local-scale air quality is uniformly improved by urban forests is scarce. We studied the influence of conifer-dominated peri-urban forests on the springtime levels of NO2 and particle pollution at different distances from roads, using passive samplers and high time resolution particle counters in a northern climate in Finland. Passive samplers provided average values over a one month period, while active particle counters provided real time measurements of air pollution to mimic human inhalation frequency. NO2 concentrations were slightly higher in forests than in adjacent open areas, while passive particle measurements showed the opposite trend. Active particle monitoring campaigns showed no systematic forest effect for PM2.5, but larger particles were reduced in the forest, corroborating the passive sampling result. Attenuation rates of the mean values of the studied pollutants did not differ between the forest and open habitats. However, high time resolution particle data revealed a distance effect that was apparent only in the forest transect: peak events at the forest edge were higher, while peaks furthest from the road were lower compared to the open transect. Furthermore, the magnitude of PM2.5 peak events was distinctly higher at forest edge than equivalent distance in the open area. Vegetation characteristics, such as canopy cover and tree density, did not explain differences in pollutant levels in majority of cases. Our results imply that evergreen-dominated forests near roads can slightly worsen local air quality regarding NO2 and PM2.5 in northern climates, but that coarser particle pollution can be reduced by such forest vegetation. It seems that the potential of roadside vegetation to mitigate air pollution is largely determined by the vegetation effects on airflow.

The present study addresses toxicological properties of metal contaminated soils, using glassworks sites in south-easternl Sweden as study objects. Soil from five selected glassworks sites as well as from nearby reference areas were analysed for total and water-soluble metal concentrations and general geochemical parameters. A battery of biotests was then applied to assess the toxicity of the glassworks soil environments: a test of phytotoxicity with garden cress (Lepidium sativum); the BioTox(TM) test for toxicity to bacteria using Vibrio fischeri; and analyses of abundancies and biomass of nematodes and enchytraeids. The glassworks-and reference areas were comparable with respect to pH and the content of organic matter and nutrients (C, N, P), but total metal concentrations (Pb, As, Ba, Cd and Zn) were significantly higher at the former sites. Higher metal concentrations in the water-soluble fraction were also observed, even though these concentrations were low compared to the total ones. Nevertheless, toxicity of the glassworks soils was not detected by the two ex situ tests; inhibition of light emission by V. fischeri could not be seen, nor was an effect seen on the growth of L. sativum. A decrease in enchytraeid and nematode abundance and biomass was, however, observed for the landfill soils as compared to reference soils, implying in situ toxicity to soil-inhabiting organisms. The confirmation of in situ bioavailability and negative effects motivates additional studies of the risk posed to humans of the glassworks villages. (C) 2017 Published by Elsevier B.V.

A substantial percentage of manure nitrogen (N) can be lost as gaseous ammonia (NH3) during storage and field spreading. Lowering slurry pH is a simple and accepted method for preserving its N. Efficiency of slow pyrolysis liquid (PL) produced from birch (Betula sp.) as an acidifying agent, and its ability to reduce NH3 emissions following surface application of cattle slurry, was studied in a field experiment. Untreated slurry (US) and slurries acidified with PL and sulfuric acid (SA) were applied to the second harvest of a grass ley. Immediate NH3 emissions, grass biomass, N-yield and possible toxic impacts on soil nematodes and enchytraeids were examined. Furthermore, the effects on soil respiration, nitrogen dynamics and seed germination were studied in subsequent laboratory experiments. In the field, over one third of the water-extractable ammonium-N (NH4-N) applied was lost through NH3 volatilization from US. SA and PL acidified slurries reduced NH3-N emission rate equally from 3.4 to

Production of organic fertilizers from poultry manure may compromise availability of phosphorus (P) to plants. This study examined the effects of granulation, feather meal addition, and pyrolysis on bioavailability of P in broiler manure in a pot experiment with ryegrass and assessed whether P availability is enhanced by inoculating arbuscular mycorrhizal fungi (AMF) into soil. Granulated broiler manure gave similar plant yield and P uptake to superphosphate. Feather meal addition had a minor negative effect on P availability, whereas pyrolysis lowered the fertilization effect of broiler manure. The yield-based mineral-P equivalences were 120%, 85% and 75% during the first harvest, and 100%, 75% and 45% during one growing season for granulated unamended, granulated amended with feather meal and pyrolyzed broiler manure. Soil inoculation with AMF did not enhance P availability. Granulated poultry manure is suitable as a P fertilizer for annual crops with comparable bioavailability to mineral fertilizer P, whereas pyrolyzed poultry manure is suitable as a slow-release or storage P fertilizer in slightly acidic soils. Knowledge on P bioavailability in organic fertilizers produced with different technologies can be used for optimizing fertilization, minimizing build-up of soil P and its adverse environmental effects. (C) 2021 The Author(s). Published by Elsevier B.V.

The predicted increase in the number of urban flood events can result in substantial monetary losses to society. These costs may be alleviated by preserving ecosystem services, such as urban runoff management. We studied the monetary value of this ecosystem service by applying the replacement cost method in six catchments with varying land-use intensities in two cities in Finland. The economic analysis was based on metric data of urban runoff generation, provided by automatic monitoring stations in the catchments. A hydrological model was applied to estimate evaporation from impervious surfaces, and to simulate runoff in the catchments. Our results suggest that leaving green space unconstructed results in significant monetary savings. The cost of managing runoff correlated with land-use intensity. The ecosystem service value (ESV) was generally higher in catchments with high land-use intensity, low proportion of green space, and high costs of runoff management. Depending on the degree of imperviousness, the ESV ranged from 90,000–270,000 € ha−1. Further, our results suggest that estimates of runoff generation and evaporation are key hydrological factors for assessing ESV. Our study demonstrates how the combination of field data and hydrological and monetary analyses can support regional planning in cold climates.

Trees and other vegetation absorb and capture air pollutants, leading to the common perception that they, and trees in particular, can improve air quality in cities and provide an important ecosystem service for urban inhabitants. Yet, there has been a lack of empirical evidence showing this at the local scale with different plant configurations and climatic regions. We studied the impact of urban park and forest vegetation on the levels of nitrogen dioxide (NO2) and ground-level ozone (O3) while controlling for temperature during early summer (May) using passive samplers in Baltimore, USA. Concentrations of O3 were significantly lower in tree-covered habitats than in adjacent open habitats, but concentrations of NO2 did not differ significantly between tree-covered and open habitats. Higher temperatures resulted in higher pollutant concentrations and NO2 and O3 concentration were negatively correlated with each other. Our results suggest that the role of trees in reducing NO2 concentrations in urban parks and forests in the Mid-Atlantic USA is minor, but that the presence of tree-cover can result in lower O3 levels compared to similar open areas. Our results further suggest that actions aiming at local air pollution mitigation should consider local variability in vegetation, climate, micro-climate, and traffic conditions.

Within the context of enhancing sustainable and livable urban environments, one aim is to establish multifunctional green infrastructure (GI). We argue that in order to successfully plan and manage the development of GI, an inclusive and future-oriented stance concerning the needs and expectations of urbanites is required. By using green roofs as an example, the aim of this paper was to offer insights into how people envisage novel GI in urban environments and to reveal the scope of meanings and values people attach to these kinds of green infrastructure. We present results based on 149 stories collected with the method of empathy-based stories. Respondents were asked to use their imagination to produce mental images of not-yet-existing green roofs in different urban situations. Our results reflect a rich set of dimensions of green roofs that the respondents vividly imagined. Green roofs may contribute to the livability of urban areas in multiple ways, such as strengthening social cohesion, providing space for everyday renewal and restoration, offering interesting sceneries and multisensory experiences, softening the hard cityscape, showing ephemeral events and making experiences of "height" possible, as well as increasing the "contact with nature" experiences for residents, e.g. through biodiverse nature in the middle of built environments. Furthermore, the need for local, customized solutions that offer different benefits and experiences was expressed. Using both qualitative and quantitative analyses, we idealized four green roof meta-types for understanding the diverse expectations people may have for green roofs in urban area: Urban farm, Oasis, Urban hill and Meadow. Based on our results we suggest that comprehensive experiences and needs of people should be taken into account when designing urban green roofs or urban green in general not only, e.g. visual pleasure. Also, site- and user-specific solutions should be considered instead of generally applied ones. Our results offer tools for, e.g. urban planners to understand the value of diverse green roof solutions to the user. (C) 2016 The Authors. Published by Elsevier Ltd.

While the potential of plants to uptake polycyclic aromatic hydrocarbons (PAHs) is widely acknowledged, empirical evidence of the effects of this process on local atmospheric PAH concentrations and human health is tenuous. We measured gaseous PAH concentrations using passive samplers in urban tree-covered areas and adjacent open, treeless areas in a near-road environment in Finland to gain information on the ability of urban vegetation to improve air quality. The ability of urban, mostly deciduous, vegetation to affect PAHs was season dependent: during summer, concentrations were significantly higher in tree-covered areas, while in the fall, concentrations in open areas exceeded those in tree-covered areas. During winter, concentrations in tree-covered areas were either lower or did not differ from those in open areas. Results of this study imply that the commonly believed notion that trees unequivocally improve air quality does not apply to PAHs studied here.

Transformation of soils by urbanization is known to pose drastic effects on the physical, chemical and ecological characteristics of urban soils, which are likely to hamper the important ecosystem services produced by belowground biota. The use of plants in improving/restoring soils is a well established practice in various disturbed ecosystems, but the knowledge of the ability of primary producers to modify urban soils is virtually lacking. To explore the effects of aboveground plant manipulation on belowground biota and soil processes we established a field experiment using four plant species (Lotus corniculatus, Holcus lanatus, Picea abies and Calluna vulgaris) of three functional traits according to their litter quality. The 2.5-year long study applying pan lysimeters to collect water leachates from the rhizospheres was conducted at two urban sites with differing soil characteristics. Plant species producing labile litter (legume Lotus and grass Holcus) produced a higher bacterial energy channel biomass in comparison to plants (Calluna and Picea) producing recalcitrant litter. The bacterial-dominating energy channel under Lotus plots leached higher amount of inorganic nitrogen than the plots with Calluna and Picea, which had relatively higher proportion of fungal biomass in the soil. However, when the leaching loss was compared to the potentially leachable soil inorganic nitrogen, the most species-diverse mixed communities, albeit increasing the bacterial biomass, showed a highest capacity for conserving nitrogen in the soil. Our study demonstrates the great potential of plant species/functional types to modify the urban belowground communities and consequently, the nutrient dynamics of disturbed urban soils.

This study aimed at examining whether plant species of varying resource quality give rise to a fungal- or bacterial-based energy channel in the plants' rhizosphere, when planted in soil, in which the plant species naturally occur. In an 18-month large-scale laboratory mesocosm experiment, two plant species (Holcus lanatus and Lotus corniculatus) producing labile litter and two plant species (Picea abies and Calluna vulgaris) producing recalcitrant litter were placed in the same mesocosm. This allowed the decomposer biota (microbes, protozoa, nematodes, collembolans, and enchytraeid worms) to freely choose their preferred plant rhizosphere. Because a fungal-based energy channel is in theory regarded to retain nutrients better in the soil than a bacterial-based energy channel, water was collected underneath the plant species and analyzed for its nutrient (N and P) content. In general, the number of soil biota groups responding significantly to the plant treatment increased with time. Soil microbes were the first group to react, but the ability of the plants to boost a clearly fungal- or bacterial-based energy channel was generally weak. However, at the end of the study, a higher fungal-to-bacterial biomass ratio was found beneath Calluna than beneath the other plant treatments. Of the secondary consumers, nematodes were the most responsive group, with total number and especially plant parasites being more abundant beneath Lotus than beneath Picea and Calluna indicating a root-based energy channel to persist under the legume. Protozoa, enchytraeid worms and collembolans responded weakly and inconsistently to plant treatment. Liberation of plant-available nutrients was plant-dependent. Towards the end of the study, less nitrate and phosphate leached through the Picea soils than through the control, which indicates a more effective nutrient retention to take place under this plant species. We found that plant species can, in a relatively short time, modify the composition of the soil decomposer community. However, no consistent evidence for the plant-soil systems developing to separated detritus energy channels emerged, we found a clearly separated root energy channel under the legume L. corniculatus.