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Cancer is a major killer of human health and predictions for the carcinogenicity of chemicals are of great importance. In this article, predictive models for the carcinogenicity of organic compounds using QSAR methods for rats and mice were developed based on the data from CPDB. The models was developed based on the data of specific target site liver and classified according to sex of rats and mice. Meanwhile, models were also classified according to whether there is a ring in the molecular structure in order to reduce the diversity of molecular structure. Therefore, eight local models were developed in the final. Taking into account the complexity of carcinogenesis and in order to obtain as much information, DRAGON descriptors were selected as the variables used to develop models. Fitting ability, robustness and predictive power of the models were assessed according to the OECD principles. The external predictive coefficients for validation sets of each model were in the range of 0.711-0.906, and for the whole data in each model were all greater than 0.8, which represents that all models have good predictivity. In order to study the mechanism of carcinogenesis, standardized regression coefficients were calculated for all predictor variables. In addition, the effect of animal sex on carcinogenesis was compared and a trend that female showed stronger tolerance for cancerogen than male in both species was appeared., (Copyright © 2015 Elsevier Ltd. All rights reserved.)

The degradation of polycyclic aromatic hydrocarbons (PAHs) in the atmosphere can lead to toxic derivatives which contribute to the carcinogenic potential of particulate organic matter. This paper aimed to investigate the mechanism of the OH-initiated oxidation degradation of benzo[α]pyrene (BaP), a cancer risk indicator. High-accuracy molecular orbital calculations were carried out, and all of the possible degradation pathways were discussed. The theoretical results were compared with the available experimental observation. The possible secondary reactions were also investigated. The rate constants of the crucial elementary steps were evaluated by using the Rice-Ramsperger-Kassel-Marcus (RRKM) theory. The dominant degradation products involve benzo[α]pyren-ol, nitro-benzo[α]pyrene, benzo[α]pyrene-7,10-dione as well as several ring-opened products such as alkyl substituted benzanthraldehyde et al. In particular, water plays an important role in the degradation pathways leading to the formation of nitro-benzo[α]pyrene. This work provides a comprehensive investigation of the OH-initiated degradation of BaP and should help to clarify its potential risk., (Copyright © 2014 Elsevier Ltd. All rights reserved.)

OH radical-initiated atmospheric oxidation of ethyl acrylate (ethyl 2-propenoate, EA) has been investigated by performing density functional theory (DFT) calculations. Optimizations of the reactants, intermediates, transition states and products were carried out at the MPWB1K/6-31+G(d,p) level. Single-point energy calculations were performed at the MPWB1K/6-311+G(3df,2p) level of theory. The detailed oxidation mechanism was presented and discussed. The results show that the OH addition is more energetically favorable than the H abstraction. Rice-Ramsperger-Kassel-Marcus (RRKM) theory was used to predict the rate constants over the possible atmospheric temperature range of 180-370 K. The Arrhenius expression adequately describes the total rate constant: k(EA+OH)=(1.71×10(-12))exp(805.42/T)cm(3) molecule(-1) s(-1). At 298 K, the atmospheric lifetime of ethyl acrylate determined by OH radicals is about 16.2h. In order to find out the effect of alkyl substitution on the reaction activity, rate constants for the reactions of methyl acrylate, methyl methacrylate and butyl acrylate with OH radicals were also discussed. Calculation results show that the reaction activity may increase with the increased electron-donating substitution for electrophilic addition reaction., (Copyright © 2014 Elsevier Ltd. All rights reserved.)

The hydroxylation reactions of ethyl vinyl ether (EVE) in the present of O2 and NO are analyzed by using MPWB1K/6-311++G(3df,2p)//MPWB1K/6-31+G(d,p) level of theory. According to the calculated thermodynamic data, the detailed reaction mechanisms of EVE and OH are proposed. All of the ten possible reaction pathways are discussed. The major products of the title reaction are ethyl formate and formaldehyde, which is in accordance with experimental detection. The rate constants of the primary reactions over the temperature of 250-400K and the pressure range of 100-2000Torr are computed by employing MESMER program. At 298K and 760Torr, OH-addition channels are predominate and the total rate constant is ktot=4.53×10(-11)cm(3)molecule(-1)s(-1). The Arrhenius equation is obtained as ktot=6.27×10(-12)exp(611.5/T), according to the rate constants given at different temperatures. Finally, the atmospheric half life of EVE with respect to OH is estimated to be 2.13h., (Copyright © 2014 Elsevier Ltd. All rights reserved.)

The atmospheric degradation reactions of the two isomers of methomyl (MTL) initiated by OH radical in the presence of O2, NO and H2O have been investigated by density functional theory (DFT). The calculations were all carried out at MPWB1K level. The geometrical parameters and vibrational frequencies of stationary points were calculated with 6-31+G (d, p) basis sets. Single-point energy calculations were performed with 6-311+G (3df, 2p) basis sets. Profiles of the potential energy surface were constructed and all possible channels involved in the reactions were discussed. The rate constants of main elementary reactions were calculated over a temperature range of 200-400 K and mostly fitted to Arrhenius formulas. The atmospheric lifetimes of reaction species were discussed for the first time, which can be applied to the study on model simulation and management of hazardous materials., (Copyright © 2014 Elsevier Ltd. All rights reserved.)

The atmospheric OH-initiated degradation mechanisms of dimethy phthalate (DMP) are analyzed at the MPWB1K/6-311++G(3df,2p)//MPWB1K/6-31+G(d,p) level of theory. The principal products detected experimentally are confirmed by this study while several major intermediates are reported for the first time. Additionally, the pathway scheme of hydroxylation reaction of DMP is proposed. The results about initial steps indicate that hydroxyl radical is most likely to be added to the ortho-carbon atom among additional reactions, while H atoms in methyl group are the most favorable to be abstracted by the OH radical. The rate constants of the elementary reactions over the temperature of 200-400 K were deduced using RRKM theory. The overall rate constant of the title reaction is 1.18×10(-12) cm(3) molecule(-1) s(-1) at 298 K and 760 Torr while H abstraction reactions predominate. According to the rate constants given at different temperatures, the Arrhenius equation is fitted. The atmospheric half life of DMP with respect to OH is estimated to be 6.8 days., (Copyright © 2013 Elsevier Ltd. All rights reserved.)

2,4,5-Tribromophenol (2,4,5-TBP) and 3,4-dibromophenol (3,4-DBP) have the minimum number of Br atoms needed to form 2,3,7,8-PBDD/Fs, which are the most toxic among all 210 PBDD/F isomers. A mechanistic understanding of the formation of PBDD/Fs is a prerequisite for minimizing their emissions. In this paper, the homogeneous gas-phase formation of PBDD/Fs from 2,4,5-TBP and 3,4-DBP as precursors was investigated theoretically by using the density functional theory (DFT) method. The mathematical model to predict the formation of PBDD/Fs places a high demand on accurate kinetic parameters. So, the rate constants of key elementary steps involved in the formation of PBDD/Fs were calculated by using canonical variational transition-state (CVT) theory with small curvature tunneling (SCT) contribution over a wide temperature range of 600-1200K. The pre-exponential factors and the activation energies are also reported. This might be the first to investigate the formation of 2,3,7,8-PBDD/Fs. The present study shows that the formation of PBDDs dominates over the formation of PBDFs. The meta bromine facilitates the dimerization of bromophenoxy radicals (BPRs), whereas the para and ortho bromines suppress the dimerization of BPRs., (Copyright © 2013 Elsevier Ltd. All rights reserved.)

The bromophenoxy radicals (BPRs) are key intermediate species involved in the formation of polybrominated dibenzo-p-dioxin/dibenzofurans (PBDD/Fs). In this work, the formation of BPRs from the complete series reactions of 19 bromophenol (BP) congeners with H and OH radicals were investigated theoretically by using the density functional theory (DFT) method and the direct dynamics method. The geometries and frequencies of the reactants, transition states, and products were calculated at the MPWB1K/6-31+G(d,p) level, and the energetic parameters were further refined by the MPWB1K/6-311+G(3df,2p) method. The rate constants were evaluated by the canonical variational transition-state (CVT) theory with the small curvature tunneling (SCT) contribution over a wide temperature range of 600-1200K. The present study indicates that the reactivity of the O-H bonds in BPs as well as the formation potential of BPRs from BPs is strongly related to the bromine substitution pattern. The obtained results can be used for future estimates of PBDD/F emissions quantity based on the well estimated PCDD/F inventory., (Copyright © 2013. Published by Elsevier Ltd.)