1. Reconstitution of Chromatin by Stepwise Salt Dialysis.
- Author
-
Cruz-Becerra, Grisel and Kadonaga, James T
- Subjects
Biochemistry and Cell Biology ,Biological Sciences ,Genetics ,Rare Diseases ,Underpinning research ,1.1 Normal biological development and functioning ,Generic health relevance ,Core histones ,DNA ,Chromatin ,Chromatin reconstitution ,Salt dialysis ,Micrococcal nuclease ,Biological sciences ,Biomedical and clinical sciences - Abstract
Chromatin, rather than plain DNA, is the natural substrate of the molecular machines that mediate DNA-directed processes in the nucleus. Chromatin can be reconstituted in vitro by using different methodologies. The salt dialysis method yields chromatin that consists of purified histones and DNA. This biochemically pure chromatin is well-suited for a wide range of applications. Here, we describe simple and straightforward protocols for the reconstitution of chromatin by stepwise salt dialysis and the analysis of the chromatin by the micrococcal nuclease (MNase) digestion assay. Chromatin that is reconstituted with this method can be used for efficient homology-directed repair (HDR)-mediated gene edited with the CRISPR-Cas9 system as well as for biochemical studies of chromatin dynamics and function.
- Published
- 2021