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Additional file 8. Supplement tables (Table S1, Table S2 and Table S3).

Additional file 8: Table S4. The AS events and their gene distribution predicted from Illumina data.

Additional file 2: Table S2. The determination of maternal expression of mitochondrial gene in the two reciprocal cross hybrids.

Additional file 1: Table S1. The summary of 45S rDNA in the two reciprocal cross hybrids.

Additional file 2: Figure S1. Variable sequence types (including haplotypes and recombinant clusters) in different Hox genes in these species. Figure S2. Variable sequence types (including haplotypes and recombinant clusters) in different Hox genes in these species. Figure S3. Variable sequence types (including haplotypes and recombinant clusters) in HoxB5b in these species.

Several chimeras verified in genome DNA level. (DOCX 235 kb)

Several growth-related genes showed BSB-ELD in the two types of hybrids. (DOCX 15 kb)

Table S1. Summary of the annotated information of the testis transcriptome. Table S2. Bases counts distributed among the eight orthologs. Table S3. Special primers used for the verification of several genes (DOCX 18 kb)

The pathway information in three species. (DOCX 30 kb)

The basic information of gene silencing and novel genes in triploid offspring. (DOCX 19 kb)

Comparison of the measurable traits among the hybrid offspring and their parents. (DOCX 20 kb)

Basic information of the categories of â No changeâ in growth genes as comparison of the triploid hybrids with its parents. (DOCX 17 kb)

The peak figures of the PCR products sequencing. A, The sequencing peak figures of the PCR products amplified from genomic and cDNA of 18S rRNA gene in BSB and TC. B, The sequencing peak figures of the PCR products amplified from genomic and cDNA of 18S rRNA gene in F1 hybrids of BSB × TC. C, The sequencing peak figures of the PCR products amplified from genomic and cDNA of 18S rRNA gene in F2 hybrids of BSB × TC. Only the SNP site and 2 upstream and downstream nucleotides are showed. Note: For every pattern of each kind of fish, one sample was used to present. (PPT 275 kb)