1. Metagenomic insights into diazotrophic communities across Arctic glacier forefields
- Author
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Maisie V Nash, Liane G. Benning, Torben Nielsen, Gilda Varliero, Gary L A Barker, Thomas Turpin-Jelfs, Martyn Tranter, Alexandre M. Anesio, Patricia Sánchez-Baracaldo, and Emiley A. Eloe-Fadrosh
- Subjects
0301 basic medicine ,nitrogen fixation, metagenomics, forefield, Arctic, diversity, diazotrophs ,Firmicutes ,Nitrogen ,030106 microbiology ,Cyanobacteria ,Applied Microbiology and Biotechnology ,Microbiology ,Medical and Health Sciences ,diversity ,03 medical and health sciences ,Soil ,Arctic ,Nitrogenase ,Ice Cover ,diazotrophs ,Nitrogen cycle ,forefield ,Betaproteobacteria ,Polaromonas ,Soil Microbiology ,Phylogeny ,Alphaproteobacteria ,2. Zero hunger ,Nitrogen fixation, Metagenomics, Forefield, Arctic, Diversity, Diazotrophs ,metagenomics ,Ecology ,biology ,Arctic Regions ,15. Life on land ,Biological Sciences ,biology.organism_classification ,Carbon ,030104 developmental biology ,nitrogen fixation ,Nitrogen fixation ,Diazotroph ,Soil microbiology ,Environmental Sciences ,Research Article - Abstract
Microbial nitrogen fixation is crucial for building labile nitrogen stocks and facilitating higher plant colonisation in oligotrophic glacier forefield soils. Here, the diazotrophic bacterial community structure across four Arctic glacier forefields was investigated using metagenomic analysis. In total, 70 soil metagenomes were used for taxonomic interpretation based on 185 nitrogenase (nif) sequences, extracted from assembled contigs. The low number of recovered genes highlights the need for deeper sequencing in some diverse samples, to uncover the complete microbial populations. A key group of forefield diazotrophs, found throughout the forefields, was identified using a nifH phylogeny, associated with nifH Cluster I and III. Sequences related most closely to groups including Alphaproteobacteria, Betaproteobacteria, Cyanobacteria and Firmicutes. Using multiple nif genes in a Last Common Ancestor analysis revealed a diverse range of diazotrophs across the forefields. Key organisms identified across the forefields included Nostoc, Geobacter, Polaromonas and Frankia. Nitrogen fixers that are symbiotic with plants were also identified, through the presence of root associated diazotrophs, which fix nitrogen in return for reduced carbon. Additional nitrogen fixers identified in forefield soils were metabolically diverse, including fermentative and sulphur cycling bacteria, halophiles and anaerobes., Diverse communities of nitrogen fixing bacteria are identified across Arctic glacier forefields, revealed using community genomic sequencing. more...
- Published
- 2018
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