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In the past ten years, the number of newly added labor forces in China has continued to grow. At the same time, with the increase in the number of university candidates, the number of university employments is also increasing. Due to employment pressure from society and alumni, the government promotes innovation and entrepreneurship and promotes innovative slogans through entrepreneurship. Universities have become the people who are concerned about this slogan. As an important tool for solving large-scale computer problems, scientific computing is increasingly used in various fields of science and engineering. With the development of high-performance computing technology, various parallel computers have appeared and are widely used. This article uses a scientific computing system to conduct research on innovation and entrepreneurship. The entire scientific computing system is a typical three-tier architecture, and the small service program is responsible for analyzing the scientific computing request in the request and generating related calculation expressions. Get the comprehensive evaluation level of innovation and entrepreneurship risk: excellent score is 3.45, good score is 2.56, general score is 1.68, and difference is 0.68. [ABSTRACT FROM AUTHOR]