1. Universal, colorimetric microRNA detection strategy based on target-catalyzed toehold-mediated strand displacement reaction
- Author
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Chang Yeol Lee, Hansol Kim, Ki Soo Park, Yeonkyung Park, Hyun Gyu Park, and Shinyoung Kang
- Subjects
0301 basic medicine ,Materials science ,High selectivity ,Deoxyribozyme ,Bioengineering ,010402 general chemistry ,01 natural sciences ,Signal ,Catalysis ,03 medical and health sciences ,chemistry.chemical_compound ,microRNA ,Humans ,General Materials Science ,Electrical and Electronic Engineering ,Mechanical Engineering ,General Chemistry ,0104 chemical sciences ,MicroRNAs ,030104 developmental biology ,chemistry ,Mechanics of Materials ,Biophysics ,Feasibility Studies ,Colorimetry ,Signal transduction ,Signal amplification ,DNA - Abstract
In this work, we developed a novel, label-free, and enzyme-free strategy for the colorimetric detection of microRNA (miRNA), which relies on a target-catalyzed toehold-mediated strand displacement (TMSD) reaction. The system employs a detection probe that specifically binds to the target miRNA and sequentially releases a catalyst strand (CS) intended to trigger the subsequent TMSD reaction. Thus, the presence of target miRNA releases the CS that mediates the formation of an active G-quadruplex DNAzyme which is initially caged and inactivated by a blocker strand. In addition, a fuel strand that is supplemented for the recycling of the CS promotes another TMSD reaction, consequently generating a large number of active G-quadruplex DNAzymes. As a result, a distinct colorimetric signal is produced by the ABTS oxidation promoted by the peroxidase mimicking activity of the released G-quadruplex DNAzymes. Based on this novel strategy, we successfully detected miR-141, a promising biomarker for human prostate cancer, with high selectivity. The diagnostic capability of this system was also demonstrated by reliably determining target miR-141 in human serum, showing its great potential towards real clinical applications. Importantly, the proposed approach is composed of separate target recognition and signal transduction modules. Thus, it could be extended to analyze different target miRNAs by simply redesigning the detection probe while keeping the same signal transduction module as a universal signal amplification unit, which was successfully demonstrated by analyzing another target miRNA, let-7d.
- Published
- 2018
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