1. Epigenetic Silencing of PTEN and Epi-Transcriptional Silencing of MDM2 Underlied Progression to Secondary Acute Myeloid Leukemia in Myelodysplastic Syndrome Treated with Hypomethylating Agents.
- Author
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Lee, Paul, Yim, Rita, Miu, Kai-Kei, Fung, Sin-Hang, Liao, Jason Jinyue, Wang, Zhangting, Li, Jun, Yung, Yammy, Chu, Hiu-Tung, Yip, Pui-Kwan, Lee, Emily, Tse, Eric, Kwong, Yok-Lam, and Gill, Harinder
- Subjects
MYELODYSPLASTIC syndromes ,ACUTE myeloid leukemia ,ALTERNATIVE RNA splicing ,EPIGENETICS ,CELL lines ,EPIGENOMICS - Abstract
In myelodysplastic syndrome (MDS), resistance to hypomethylating agents (HMA) portends a poor prognosis, underscoring the importance of understanding the molecular mechanisms leading to HMA-resistance. In this study, P39 and Kasumi-1 cells and their azacitidine-resistant and decitabine-resistant sublines were evaluated comparatively with transcriptomic and methylomic analyses. Expression profiling and genome-wide methylation microarray showed downregulation of PTEN associated with DNA hypermethylation in P39 cell lines resistant to azacitidine and decitabine. This pattern of PTEN dysregulation was also confirmed in a cohort of patients failing treatment with HMA. DNA hypomethylation of MDM2 was detected with downregulation of MDM2 in HMA resistant cell lines. Long-read sequencing revealed significant RNA hypomethylation of MDM2 resulting in alternative splicing and production of a truncated MDM2 transcript in azacitidine-resistant P39 cells. The expression of this MDM2 truncated transcript was also significantly increased in HMA-resistant patients compared with HMA-responsive patients. In conclusion, epigenetic and epi-transcriptomic dysregulation of PTEN and MDM2 were associated with resistance to hypomethylating agents. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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