1. Systematic Bioinformatic Analyses of Nutrigenomic Modifications by Polyphenols Associated with Cardiometabolic Health in Humans-Evidence from Targeted Nutrigenomic Studies
- Author
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Verica Milošević, Tatjana Ruskovska, Karla Fabiola Corral-Jara, Vladimir Ajdžanović, Marko Miler, Egeria Scoditti, Milkica Janeva, Irena Krga, Francisca Isabel Bravo, Christine Morand, David Vauzour, Georgia-Eirini Deligiannidou, Christos Kontogiorgis, Manuel Suárez, Jaroslav Havlik, E. Kistanova, Dragan Milenkovic, Marika Massaro, Anna Arola-Arnal, Irena Budić-Leto, Marika Massaro, Anna Arola-Arnal, EGERIA SCODITTI, Georgia -Eirini Deligiannidou, Christos Kontogiorgis, Irena Krga, Francisca Isabel Bravo, Dragan Milenkovic, Tatjana Ruskovska, Elena K Kistanova, Marko Miler, Dr David Vauzour, Georgia-Eirini Deligiannidou, Manuel Suarez Recio, Jaroslav Havlík, University Goce Delcev (UGD), Institute for Adriatic Crops and Karst Reclamation, Unité de Nutrition Humaine (UNH), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Clermont Auvergne (UCA), Institute for Biological Research Sinisa Stankovic [Belgrade] (IBISS), University of Belgrade [Belgrade], Universitat Rovira i Virgili, Democritus University of Thrace (DUTH), Czech University of Life Sciences Prague (CZU), Bulgarian Academy of Sciences (BAS), Institute of Clinical Physiology (IFC), National Research Council [Italy] (CNR), University of East Anglia [Norwich] (UEA), University of California [Davis] (UC Davis), and University of California (UC)
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0301 basic medicine ,Male ,Messenger ,systematic literature search ,Cardiovascular ,0302 clinical medicine ,2.1 Biological and endogenous factors ,TX341-641 ,Nutritional Physiological Phenomena ,Aetiology ,Metabolic Syndrome ,education.field_of_study ,Nutrition and Dietetics ,food and beverages ,nutrigenomics ,integrative bioinformatics ,polyphenols ,cardiometabolic health ,human ,Middle Aged ,Nutrigenomics ,Female ,Signal transduction ,Biotechnology ,Signal Transduction ,Adult ,Population ,030209 endocrinology & metabolism ,Computational biology ,Biology ,Protective Agents ,Real-Time Polymerase Chain Reaction ,Article ,03 medical and health sciences ,Food Sciences ,Clinical Research ,microRNA ,Complementary and Integrative Health ,Genetics ,Humans ,RNA, Messenger ,education ,Transcription factor ,Gene ,Nutrition ,Integrative bioinformatics ,Nutrition. Foods and food supply ,Cardiometabolic Risk Factors ,Computational Biology ,MicroRNAs ,030104 developmental biology ,Good Health and Well Being ,RNA ,Generic health relevance ,[SDV.AEN]Life Sciences [q-bio]/Food and Nutrition ,Function (biology) ,Food Science - Abstract
International audience; Cardiometabolic disorders are among the leading causes of mortality in the human population. Dietary polyphenols exert beneficial effects on cardiometabolic health in humans. Molecular mechanisms, however, are not completely understood. Aiming to conduct in-depth integrative bioinformatic analyses to elucidate molecular mechanisms underlying the protective effects of polyphenols on cardiometabolic health, we first conducted a systematic literature search to identify human intervention studies with polyphenols that demonstrate improvement of cardiometabolic risk factors in parallel with significant nutrigenomic effects. Applying the predefined inclusion criteria, we identified 58 differentially expressed genes at mRNA level and 5 miRNAs, analyzed in peripheral blood cells with RT-PCR methods. Subsequent integrative bioinformatic analyses demonstrated that polyphenols modulate genes that are mainly involved in the processes such as inflammation, lipid metabolism, and endothelial function. We also identified 37 transcription factors that are involved in the regulation of polyphenol modulated genes, including RELA/NFKB1, STAT1, JUN, or SIRT1. Integrative bioinformatic analysis of mRNA and miRNA-target pathways demonstrated several common enriched pathways that include MAPK signaling pathway, TNF signaling pathway, PI3K-Akt signaling pathway, focal adhesion, or PPAR signaling pathway. These bioinformatic analyses represent a valuable source of information for the identification of molecular mechanisms underlying the beneficial health effects of polyphenols and potential target genes for future nutrigenetic studies.
- Published
- 2021
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