143 results on '"Sayed, Ahmed. M."'
Search Results
2. Unveiling the Antiviral Efficacy of Forskolin: A Multifaceted In Vitro and In Silico Approach.
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Amen, Yhiya, Selim, Mohamed A, Suef, Reda A., Sayed, Ahmed M., and Othman, Ahmed
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FORSKOLIN ,ANTIVIRAL agents ,HYDROGEN bonding interactions ,VIRUS diseases ,VIRAL hepatitis ,HEPATITIS A virus ,HEPATITIS viruses - Abstract
Coleus forskohlii (Willd.) Briq. is a medicinal herb of the Lamiaceae family. It is native to India and widely present in the tropical and sub-tropical regions of Egypt, China, Ethiopia, and Pakistan. The roots of C. forskohlii are edible, rich with pharmaceutically bioactive compounds, and traditionally reported to treat a variety of diseases, including inflammation, respiratory disorders, obesity, and viral ailments. Notably, the emergence of viral diseases is expected to quickly spread; consequently, these data impose a need for various approaches to develop broad active therapeutics for utilization in the management of future viral infectious outbreaks. In this study, the naturally occurring labdane diterpenoid derivative, Forskolin, was obtained from Coleus forskohlii. Additionally, we evaluated the antiviral potential of Forskolin towards three viruses, namely the herpes simplex viruses 1 and 2 (HSV-1 and HSV-2), hepatitis A virus (HAV), and coxsackievirus B4 (COX-B4). We observed that Forskolin displayed antiviral activity against HAV, COX-B4, HSV-1, and HSV-2 with IC
50 values of 62.9, 73.1, 99.0, and 106.0 μg/mL, respectively. Furthermore, we explored the Forskolin's potential antiviral target using PharmMapper, a pharmacophore-based virtual screening platform. Forskolin's modeled structure was analyzed to identify potential protein targets linked to its antiviral activity, with results ranked based on Fit scores. Cathepsin L (PDB ID: 3BC3) emerged as a top-scoring hit, prompting further exploration through molecular docking and MD simulations. Our analysis revealed that Forskolin's binding mode within Cathepsin L's active site, characterized by stable hydrogen bonding and hydrophobic interactions, mirrors that of a co-crystallized inhibitor. These findings, supported by consistent RMSD profiles and similar binding free energies, suggest Forskolin's potential in inhibiting Cathepsin L, highlighting its promise as an antiviral agent. [ABSTRACT FROM AUTHOR]- Published
- 2024
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3. Qualitative Aspects of a Fractional-Order Integro-Differential Equation with a Quadratic Functional Integro-Differential Constraint.
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El-Sayed, Ahmed M. A., Alhamali, Antisar A. A., Hamdallah, Eman M. A., and Ebead, Hanaa R.
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FUNCTIONAL equations , *QUADRATIC equations , *INTEGRO-differential equations - Abstract
This manuscript investigates a constrained problem of an arbitrary (fractional) order quadratic functional integro-differential equation with a quadratic functional integro-differential constraint. We demonstrate that there is at least one solution x ∈ C [ 0 , T ] to the problem. Moreover, we outline the necessary demands for the solution's uniqueness. In addition, the continuous dependence of the solution and the Hyers–Ulam stability of the problem are analyzed. In order to illustrate our results, we provide some particular cases and instances. [ABSTRACT FROM AUTHOR]
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- 2023
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4. An Investigation of a Nonlinear Delay Functional Equation with a Quadratic Functional Integral Constraint.
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El-Sayed, Ahmed M. A., Ba-Ali, Malak M. S., and Hamdallah, Eman M. A.
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FUNCTIONAL equations , *INTEGRAL equations , *QUADRATIC equations , *NONLINEAR equations , *INTEGRALS , *DELAY differential equations , *NONLINEAR functional analysis - Abstract
This research paper focuses on investigating the solvability of a constrained problem involving a nonlinear delay functional equation subject to a quadratic functional integral constraint, in two significant cases: firstly, the existence of nondecreasing solutions in a bounded interval L 1 [ 0 , T ] and, secondly, the existence of nonincreasing solutions in unbounded interval L 1 (R +) . Moreover, the paper explores various qualitative properties associated with these solutions for the given problem. To establish the validity of our claims, we employ the De Blasi measure of noncompactness (MNC) technique as a basic tool for our proofs. In the first case, we provide sufficient conditions for the uniqueness of the solution ψ ∈ L 1 [ 0 , T ] and rigorously demonstrate its continuous dependence on some parameters. Additionally, we establish the equivalence between the constrained problem and an implicit hybrid functional integral equation (IHFIE). Furthermore, we delve into the study of Hyers–Ulam stability. In the second case, we examine both the asymptotic stability and continuous dependence of the solution ψ ∈ L 1 (R +) on some parameters. Finally, some examples are provided to verify our investigation. [ABSTRACT FROM AUTHOR]
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- 2023
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5. Development and Evaluation of a Self-Nanoemulsifying Drug Delivery System for Sinapic Acid with Improved Antiviral Efficacy against SARS-CoV-2.
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Alhadrami, Hani A., El-Din, Ahmed S.G. Srag, Hassan, Hossam M., Sayed, Ahmed M., Alhadrami, Albaraa H., Rateb, Mostafa E., and Naguib, Demiana M.
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DRUG delivery systems ,ANTIVIRAL agents ,SARS-CoV-2 ,MOLECULAR dynamics - Abstract
This study aimed to develop a self-nanoemulsifying drug delivery system (SNE) for sinapic acid (SA) to improve its solubility and antiviral activity. Optimal components for the SA-SNE formulation were selected, including Labrafil as the oil, Cremophor EL as the surfactant, and Transcutol as the co-surfactant. The formulation was optimized using surface response design, and the optimized SA-SNE formulation exhibited a small globule size of 83.6 nm, high solubility up to 127.1 ± 3.3, and a 100% transmittance. In vitro release studies demonstrated rapid and high SA release from the formulation. Pharmacokinetic analysis showed improved bioavailability by 2.43 times, and the optimized SA-SNE formulation exhibited potent antiviral activity against SARS-CoV-2. The developed SA-SNE formulation can enhance SA's therapeutic efficacy by improving its solubility, bioavailability, and antiviral activity. Further in silico, modeling, and Gaussian accelerated molecular dynamics (GaMD)-based studies revealed that SA could interact with and inhibit the viral main protease (M
pro ). This research contributes to developing effective drug delivery systems for poorly soluble drugs like SA, opening new possibilities for their application via nebulization in SARS-CoV-2 therapy. [ABSTRACT FROM AUTHOR]- Published
- 2023
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6. Norlobaridone Inhibits Quorum Sensing-Dependent Biofilm Formation and Some Virulence Factors in Pseudomonas aeruginosa by Disrupting Its Transcriptional Activator Protein LasR Dimerization.
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Soltane, Raya, Alasiri, Ahlam, Taha, Mostafa N., Abd El-Aleam, Rehab H., Alghamdi, Kawthar Saad, Ghareeb, Mosad A., Keshek, Doaa El-Ghareeb, Cardoso, Susana M., and Sayed, Ahmed M.
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PSEUDOMONAS aeruginosa ,QUATERNARY structure ,BIOFILMS ,QUORUM sensing ,DIMERIZATION ,MOLECULAR dynamics - Abstract
In the present study, norlobaridone (NBD) was isolated from Parmotrema and then evaluated as a new potent quorum sensing (QS) inhibitor against Pseudomonas aeruginosa biofilm development. This phenolic natural product was found to reduce P. aeruginosa biofilm formation (64.6% inhibition) and its related virulence factors, such as pyocyanin and rhamnolipids (% inhibition = 61.1% and 55%, respectively). In vitro assays inhibitory effects against a number of known LuxR-type receptors revealed that NBD was able to specifically block P. aeruginosa's LasR in a dose-dependent manner. Further molecular studies (e.g., sedimentation velocity and thermal shift assays) demonstrated that NBD destabilized LasR upon binding and damaged its functional quaternary structure (i.e., the functional dimeric form). The use of modelling and molecular dynamics (MD) simulations also allowed us to further understand its interaction with LasR, and how this can disrupt its dimeric form. Finally, our findings show that NBD is a powerful and specific LasR antagonist that should be widely employed as a chemical probe in QS of P. aeruginosa, providing new insights into LasR antagonism processes. The new discoveries shed light on the mysterious world of LuxR-type QS in this key opportunistic pathogen. [ABSTRACT FROM AUTHOR]
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- 2023
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7. An Outlook on Hybrid Fractional Modeling of a Heat Controller with Multi-Valued Feedback Control.
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Al-Issa, Shorouk M., El-Sayed, Ahmed M. A., and Hashem, Hind H. G.
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INTEGRAL representations , *CAPUTO fractional derivatives , *BOUNDARY value problems , *THERMOSTAT - Abstract
In this study, we extend the investigations of fractional-order models of thermostats and guarantee the solvability of hybrid Caputo fractional models for heat controllers, satisfying some nonlocal hybrid multi-valued conditions with multi-valued feedback control, which involves the Chandrasekhar kernel, by using hybrid Dhage's fixed point theorem. A part of this study is dedicated to transforming this problem into an equivalent integral representation and then proving some existence results to achieve our aims. Furthermore, the continuous dependence of the unique solution on the control variable and on the set of selections will be discussed. Moreover, we provide an illustration to support our results. [ABSTRACT FROM AUTHOR]
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- 2023
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8. Asymptotic Stability and Dependency of a Class of Hybrid Functional Integral Equations.
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El-Sayed, Ahmed M. A., Ba-Ali, Malak M. S., and Hamdallah, Eman M. A.
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FUNCTIONAL equations , *INTEGRAL equations - Abstract
Here, we discuss the solvability of a class of hybrid functional integral equations by applying Darbo's fixed point theorem and the technique of the measure of noncompactness (MNC). This study has been located in space BC (R +) . Furthermore, we prove the asymptotic stability of the solution of our problem on R +. We introduce the idea of asymptotic dependency of the solutions on some parameters for that class. Moreover, general discussion, examples, and remarks are demonstrated. [ABSTRACT FROM AUTHOR]
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- 2023
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9. Analysis of a Fractional-Order Quadratic Functional Integro-Differential Equation with Nonlocal Fractional-Order Integro-Differential Condition.
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El-Sayed, Ahmed M. A., Alhamali, Antisar A. A., and Hamdallah, Eman M. A.
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INTEGRO-differential equations , *FUNCTIONAL equations , *CAPUTO fractional derivatives , *CONTINUOUS functions - Abstract
Here, we center on the solvability of a fractional-order quadratic functional integro-differential equation with a nonlocal fractional-order integro-differential condition in the class of continuous functions. The maximal and minimal solutions will be discussed. The continuous dependence of the solutions on a few parameters will be examined. Finally, the problems of conjugate orders and integer orders, and some other problems and remarks will be discussed and presented. [ABSTRACT FROM AUTHOR]
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- 2023
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10. New Aspects on the Solvability of a Multidimensional Functional Integral Equation with Multivalued Feedback Control.
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El-Sayed, Ahmed M. A., Hashem, Hind H. G., and Al-Issa, Shorouk M.
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INTEGRAL equations , *FUNCTIONAL equations - Abstract
The current study demonstrates the existence of solutions to a multidimensional functional integral equation with multivalued feedback. We seek solutions for the multidimensional functional problem that is defined, continuous, and bounded on the semi-infinite interval. Our proof is based on the technique associated with measures of noncompactness by a given modulus of continuity in the space in B C (R +). Also, some sufficient conditions are investigated to demonstrate the asymptotic stability of the solutions to that multidimensional functional equation. Additionally, we give an example and some particular cases to illustrate our outcomes. [ABSTRACT FROM AUTHOR]
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- 2023
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11. SARS-CoV-2 Post Vaccinated Adverse Effects and Efficacy in the Egyptian Population
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Elgendy, Marwa O., El-Gendy, Ahmed O., Alzarea, Abdulaziz Ibrahim, Mahmoud, Sarah, Alqahtani, Saad S., Fahmy, Alzhraa M., El-Seedi, Hesham, Sayed, Ahmed M., Alatawi, Ahmed D., Abdelrahim, Mohamed E. A., Alanazi, Abdullah S., Elgendy, Marwa O., El-Gendy, Ahmed O., Alzarea, Abdulaziz Ibrahim, Mahmoud, Sarah, Alqahtani, Saad S., Fahmy, Alzhraa M., El-Seedi, Hesham, Sayed, Ahmed M., Alatawi, Ahmed D., Abdelrahim, Mohamed E. A., and Alanazi, Abdullah S.
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Vaccines are the solution to overcome SARS-CoV-2. This study aimed to determine the post-Sinopharm vaccine safety-profile and immunity through antibody titers. Data were collected using a structured questionnaire from Egyptian participants who received two doses of Sinopharm vaccine. Data were divided into three parts, the first and second parts were to detect participants' post-first and second dose symptoms and practices, and the third for the results of IgG anti spike protein antibodies test and laboratory tests. Pain, redness, swelling at the injection site, headache, fatigue, and lethargy were the most common post-vaccine symptoms for both first and second doses. Most of the participants felt mild or no symptoms after vaccination. The symptoms started mostly during the first day post-vaccination and lasted for no more than two days. Forty-nine percent of the participants resulted in positive antibodies tests on day 18 post-vaccination. The average antibody level for vaccinated participants with past SARS-CoV-2 infection was much higher than that for non-past infected participants. These vaccines' administration methods need to be reevaluated by changing the dose, dose interval, adding a third dose, or mixing it with other vaccines with different techniques to improve their protection rates. Further studies are required to validate this finding.
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- 2022
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12. Investigating Asymptotic Stability for Hybrid Cubic Integral Inclusion with Fractal Feedback Control on the Real Half-Axis.
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Hashem, Hind H. G., El-Sayed, Ahmed M. A., and Al-Issa, Shorouk M.
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INTEGRALS , *CONTINUITY - Abstract
In this paper, we discuss the existence of solutions for a hybrid cubic delayed integral inclusion with fractal feedback control. We are seeking solutions for these hybrid cubic delayed integral inclusions that are defined, continuous, and bounded on the semi-infinite interval. Our proof is based on the technique associated with measures of noncompactness by a given modulus of continuity in the space in B C (R +). In addition, some sufficient conditions are investigated to demonstrate the asymptotic stability of the solutions of that integral inclusion. Finally, some cases analyzed are in the presence and absence of the control variable, and two examples are provided in order to indicate the validity of the assumptions. [ABSTRACT FROM AUTHOR]
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- 2023
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13. Targeting SIRT1/FoxO3a/Nrf2 and PI3K/AKT Pathways with Rebamipide Attenuates Acetic Acid-Induced Colitis in Rats.
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Abdel-Fattah, Maha M., Hassanein, Emad H. M., Sayed, Ahmed M., Alsufyani, Shuruq E., El-Sheikh, Azza A. K., Arab, Hany H., and Mohamed, Wafaa R.
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PI3K/AKT pathway ,COLITIS ,ULCERATIVE colitis ,DUODENAL ulcers ,INFLAMMATORY bowel diseases ,GENE expression - Abstract
Rebamipide is a quinolone derivative that has been commonly used for the treatment of gastric and duodenal ulcers. However, the molecular mechanisms of rebamipide against acetic acid-evoked colitis have not been adequately examined. Hence, the current study aimed to investigate the ameliorative effect of rebamipide in a rat model of acetic acid-evoked ulcerative colitis and the linked mechanisms pertaining to SIRT1/FoxO3a/Nrf2 and PI3K/AKT pathways. Herein, colitis was induced by the intrarectal administration of 3% acetic acid solution in saline (v/v) while rebamipide was administered by oral gavage (100 mg/kg/day) for seven days before the colonic insult. The colonic injury was examined by macroscopical and microscopical examination. The current findings demonstrated that rebamipide significantly improved the colonic injury by lowering the colonic disease activity index and macroscopic mucosal injury score. Moreover, it mitigated the histopathological aberrations and microscopical damage score. The favorable outcomes of rebamipide were driven by combating inflammation evidenced by dampening the colonic expression of NF-κBp65 and the pro-inflammatory markers CRP, TNF-α, and IL-6. In the same context, rebamipide curtailed the colonic pro-inflammatory PI3K/AKT pathway as seen by downregulating the immunostaining of PI3K and p-AKT(Ser473) signals. In tandem, rebamipide combated the colonic pro-oxidant events and augmented the antioxidant milieu by significantly diminishing the colonic TBARS and replenishing GSH, SOD, GST, GPx, and CAT. In the same regard, rebamipide stimulated the colonic upstream SIRT1/FoxO3a/Nrf2 axis by upregulating the expression of SIRT1, FoxO3a, and Nrf2, alongside downregulating Keap-1 gene expression. These antioxidant actions were accompanied by upregulation of the protein expression of the cytoprotective signal PPAR-γ in the colons of rats. In conclusion, the present findings suggest that the promising ameliorative features of rebamipide against experimental colitis were driven by combating the colonic inflammatory and oxidative responses. In perspective, augmentation of colonic SIRT1/FoxO3a/Nrf2 and inhibition of PI3K/AKT pathways were engaged in the observed favorable outcomes. [ABSTRACT FROM AUTHOR]
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- 2023
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14. Analytical Contribution to a Cubic Functional Integral Equation with Feedback Control on the Real Half Axis.
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El-Sayed, Ahmed M. A., Hashem, Hind H. G., and Al-Issa, Shorouk M.
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FUNCTIONAL equations , *INTEGRAL equations , *NEUROPLASTICITY , *BIOLOGICAL systems , *CONTINUOUS functions , *SYNTHETIC biology - Abstract
Synthetic biology involves trying to create new approaches using design-based approaches. A controller is a biological system intended to regulate the performance of other biological processes. The design of such controllers can be based on the results of control theory, including strategies. Integrated feedback control is central to regulation, sensory adaptation, and long-term effects. In this work, we present a study of a cubic functional integral equation with a general and new constraint that may help in investigating some real problems. We discuss the existence of solutions for an equation that involves a control variable in the class of bounded continuous functions BC (R +) , by applying the technique of measure of noncompactness on R + . Furthermore, we establish sufficient conditions for the continuous dependence of the state function on the control variable. Finally, some remarks and discussion are presented to demonstrate our results. [ABSTRACT FROM AUTHOR]
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- 2023
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15. Treatment of a Coupled System for Quadratic Functional Integral Equation on the Real Half-Line via Measure of Noncompactness.
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El-Sayed, Ahmed M. A., Omar, Yasmin M. Y., Hashem, Hind H. G., and Al-Issa, Shorouk M.
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INTEGRAL equations ,MATHEMATICAL bounds ,CONTINUOUS functions ,STABILITY theory ,PROBLEM solving - Abstract
This article is devoted to the solvability and the asymptotic stability of a coupled system of a functional integral equation on the real half-axis. Our consideration is located in the space of bounded continuous functions on R + (B C (R +)). The main tool applied in this work is the technique associated with measures of noncompactness in B C (R +) by a given modulus of continuity. Next, we formulate and prove a sufficient condition for the solvability of that coupled system. We, additionally, provide an example and some particular cases to demonstrate the effectiveness and value of our results. [ABSTRACT FROM AUTHOR]
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- 2023
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16. Blackberry-Loaded AgNPs Attenuate Hepatic Ischemia/Reperfusion Injury via PI3K/Akt/mTOR Pathway.
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Fathi, Ahmed M., Waz, Shaimaa, Alaaeldin, Eman, Toni, Nisreen D. M., El-Sheikh, Azza A. K., Sayed, Ahmed M., Abdelmohsen, Usama Ramadan, and Nazmy, Maiiada H.
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ANTHOCYANINS ,REPERFUSION injury ,MOLECULAR dynamics ,ISCHEMIA ,OXIDATIVE stress ,LIVER surgery - Abstract
Liver ischemia-reperfusion injury (IRI) is a pathophysiological insult that often occurs during liver surgery. Blackberry leaves are known for their anti-inflammatory and antioxidant activities. Aims: To achieve site-specific delivery of blackberry leaves extract (BBE) loaded AgNPs to the hepatocyte in IRI and to verify possible molecular mechanisms. Methods: IRI was induced in male Wister rats. Liver injury, hepatic histology, oxidative stress markers, hepatic expression of apoptosis-related proteins were evaluated. Non-targeted metabolomics for chemical characterization of blackberry leaves extract was performed. Key findings: Pre-treatment with BBE protected against the deterioration caused by I/R, depicted by a significant improvement of liver functions and structure, as well as reduction of oxidative stress with a concomitant increase in antioxidants. Additionally, BBE promoted phosphorylation of antiapoptotic proteins; PI3K, Akt and mTOR, while apoptotic proteins; Bax, Casp-9 and cleaved Casp-3 expressions were decreased. LC-HRMS-based metabolomics identified a range of metabolites, mainly flavonoids and anthocyanins. Upon comprehensive virtual screening and molecular dynamics simulation, the major annotated anthocyanins, cyanidin and pelargonidin glucosides, were suggested to act as PLA2 inhibitors. Significance: BBE can ameliorate hepatic IRI augmented by BBE-AgNPs nano-formulation via suppressing, oxidative stress and apoptosis as well as stimulation of PI3K/Akt/mTOR signaling pathway. [ABSTRACT FROM AUTHOR]
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- 2023
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17. Experimental Analysis of Channel Steel Member under Tension Load with Damage in the Unconnected Legs.
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Sayed, Ahmed M., Alanazi, Hani, Abadel, Aref A., Alharbi, Yousef R., and Shamsudin, Mohd F.
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TENSION loads , *STEEL analysis , *AXIAL loads , *STRESS concentration - Abstract
Damage occurring to steel element structures is highly possible due to tearing ruptures, corrosion, or the adoption of sudden loads. The damage has a great effect on their capacity to bear load and the corresponding elongation, as well as the distribution of the stresses in the cross-section of the element. Therefore, in the present research, experimental tests were carried out on 15 specimens of channel steel elements with different damage ratios in the unconnected legs and at different locations along the element's length. Through the test, the load and the corresponding elongation values were obtained for the control and damaged specimens. From the study of the different variables, it was demonstrated that the damage location does not significantly affect the load capacity, with a maximum difference of 1.9%. With the presence of the damage in only one leg at a ratio of less than or equal to 40%, the prediction of the value of the loss in the load is within the safe limit. However, if this ratio increases, there is a defect in calculating the loss in the load as it is greater than the effect of the damage. If there is any damage in the two legs of the channel together, the prediction of the loss of load is within the safe limit, where the loss is less than the effect of the damage ratio. We propose a model that can predict the capacitance of the axial load of steel channel elements through identifying the ratio of damage in the unconnected leg. [ABSTRACT FROM AUTHOR]
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- 2023
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18. Identification of Potential Leishmania N-Myristoyltransferase Inhibitors from Withania somnifera (L.) Dunal: A Molecular Docking and Molecular Dynamics Investigation.
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Orabi, Mohamed A. A., Alshahrani, Mohammed Merae, Sayed, Ahmed M., Abouelela, Mohamed E., Shaaban, Khaled A., and Abdel-Sattar, El-Shaymaa
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MOLECULAR docking ,MOLECULAR dynamics ,WITHANIA somnifera ,LEISHMANIA ,ANTIPROTOZOAL agents - Abstract
Leishmaniasis is a group of infectious diseases caused by Leishmania protozoa. The ineffectiveness, high toxicity, and/or parasite resistance of the currently available antileishmanial drugs has created an urgent need for safe and effective leishmaniasis treatment. Currently, the molecular-docking technique is used to predict the proper conformations of small-molecule ligands and the strength of the contact between a protein and a ligand, and the majority of research for the development of new drugs is centered on this type of prediction. Leishmania N-myristoyltransferase (NMT) has been shown to be a reliable therapeutic target for investigating new anti-leishmanial molecules through this kind of virtual screening. Natural products provide an incredible source of affordable chemical scaffolds that serve in the development of effective drugs. Withania somnifera leaves, roots, and fruits have been shown to contain withanolide and other phytomolecules that are efficient anti-protozoal agents against Malaria, Trypanosoma, and Leishmania spp. Through a review of previously reported compounds from W. somnifera-afforded 35 alkaloid, phenolic, and steroid compounds and 132 withanolides/derivatives, typical of the Withania genus. These compounds were subjected to molecular docking screening and molecular dynamics against L. major NMT. Calycopteretin-3-rutinoside and withanoside IX showed the highest affinity and binding stability to L. major NMT, implying that these compounds could be used as antileishmanial drugs and/or as a scaffold for the design of related parasite NMT inhibitors with markedly enhanced binding affinity. [ABSTRACT FROM AUTHOR]
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- 2023
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19. Screening and Molecular Docking of Bioactive Metabolites of the Red Sea Sponge Callyspongia siphonella as Potential Antimicrobial Agents.
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Musa, Arafa, Abdelgawad, Mohamed A., Shaker, Mohamed E., El-Ghorab, Ahmed H., Parambi, Della Grace Thomas, Hamed, Ahmed A., Sayed, Ahmed M., Hassan, Hossam M., and Aboseada, Mahmoud A.
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MOLECULAR docking ,SPONGES (Invertebrates) ,ANTI-infective agents ,METABOLITES ,DICHLOROMETHANE ,ANTIBACTERIAL agents - Abstract
Marine sponges create a wide range of bioactive secondary metabolites, as documented throughout the year. Several bioactive secondary metabolites were isolated from different members of Callyspongia siphonella species. This study aimed for isolation and structural elucidation of major metabolites in order to investigate their diverse bioactivities such as antimicrobial and anti-biofilm activities. Afterwards, a molecular docking study was conducted, searching for the possible mechanistic pathway of the most bioactive metabolites. Extraction, fractionation, and metabolomics analysis of different fractions was performed in order to obtain complete chemical profile. Moreover, in vitro assessment of different bioactivities was performed, using recent techniques. Additionally, purification, structural elucidation of high features using recent chromatographic and spectroscopic techniques was established. Finally, AutoDock Vina software was used for the Pharmacophore-based docking-based analysis. As a result, DCM (dichloromethane) fraction exerted the best antibacterial activity using disc diffusion method; particularly against S. aureus with an inhibition zone of 6.6 mm. Compound 11 displayed a considerable activity against both MRSA (Methicillin-resistant Staphyllococcus aureus) and Staphyllococcus aureus with inhibition ratios of 50.37 and 60.90%, respectively. Concerning anti-biofilm activity, compounds 1 and 2 displayed powerful activity with inhibition ratios ranging from 39.37% to 70.98%. Pharmacophore-based docking-based analysis suggested elongation factor G (EF-G) to be a probable target for compound 11 (siphonellinol C) that showed the best in vitro antibacterial activity, offering unexplored potential for new drugs and treatment candidates. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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20. Development on a Fractional Hybrid Differential Inclusion with a Nonlinear Nonlocal Fractional-Order Integral Inclusion.
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El-Sayed, Ahmed M. A., El-Salam, Sheren A. Abd, and Hashem, Hind H. G.
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FRACTIONAL integrals , *INTEGRALS - Abstract
In this article, we consider a Riemann–Liouville fractional-order nonlinear hybrid delay differential inclusion with a nonlinear set-valued nonlocal integral condition of fractional order. We prove some existence and uniqueness results in C (I , R). We also study the continuous dependence of the solutions on the two sets of selections of the two set-valued functions, considered in our problem, and on some other parameters. Finally, to validate our results, we present an example and some particular cases. [ABSTRACT FROM AUTHOR]
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- 2022
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21. A Comprehensive In Silico Study of New Metabolites from Heteroxenia fuscescens with SARS-CoV-2 Inhibitory Activity.
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Abdelkarem, Fahd M., Nafady, Alaa M., Allam, Ahmed E., Mostafa, Mahmoud A. H., Al Haidari, Rwaida A., Hassan, Heba Ali, Zaki, Magdi E. A., Assaf, Hamdy K., Kamel, Mohamed R., Zidan, Sabry A. H., Sayed, Ahmed M., and Shimizu, Kuniyoshi
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ALCYONACEA ,METABOLITES ,SARS-CoV-2 ,SARS-CoV-2 Omicron variant ,VIRAL proteins ,ANGIOTENSIN I - Abstract
Chemical investigation of the total extract of the Egyptian soft coral Heteroxenia fuscescens, led to the isolation of eight compounds, including two new metabolites, sesquiterpene fusceterpene A (1) and a sterol fuscesterol A (4), along with six known compounds. The structures of 1–8 were elucidated via intensive studies of their 1D, 2D-NMR, and HR-MS analyses, as well as a comparison of their spectral data with those mentioned in the literature. Subsequent comprehensive in-silico-based investigations against almost all viral proteins, including those of the new variants, e.g., Omicron, revealed the most probable target for these isolated compounds, which was found to be M
pro . Additionally, the dynamic modes of interaction of the putatively active compounds were highlighted, depending on 50-ns-long MDS. In conclusion, the structural information provided in the current investigation highlights the antiviral potential of H. fuscescens metabolites with 3β,5α,6β-trihydroxy steroids with different nuclei against SARS-CoV-2, including newly widespread variants. [ABSTRACT FROM AUTHOR]- Published
- 2022
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22. The Potential of Corchorus olitorius Seeds Buccal Films for Treatment of Recurrent Minor Aphthous Ulcerations in Human Volunteers.
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Shady, Nourhan Hisham, Altemani, Abdullah H., Altemani, Faisal H., Maher, Sherif A., Elrehany, Mahmoud A., Saber, Entesar Ali, Badawi, Ahmed M., El-Mordy, Fatma Mohamed Abd, Mohamed, Nada M., Abourehab, Mohammed A. S., Sayed, Ahmed M., Abdelmohsen, Usama Ramadan, and Mohamad, Soad A.
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WOUND healing ,CANKER sores ,SEEDS ,VOLUNTEERS ,SEED yield ,DRUG target - Abstract
Aphthous ulcers are very common disorders among different age groups and are very noxious and painful. The incidence of aphthous ulcer recurrence is very high and it may even last for a maximum of 6 days and usually, patients cannot stand its pain. This study aims to prepare a buccoadhesive fast dissolving film containing Corchorus olitorius seed extract to treat recurrent minor aphthous ulceration (RMAU) in addition to clinical experiments on human volunteers. An excision wound model was used to assess the in vivo wound healing potential of Corchorus olitorius L. seed extract, with a focus on wound healing molecular targets such as TGF-, TNF-, and IL-1. In addition, metabolomic profiling using HR-LCMS for the crude extract of Corchorus olitorius seeds was explored. Moreover, molecular docking experiments were performed to elucidate the binding confirmation of the isolated compounds with three molecular targets (TNF-α, IL-1β, and GSK3). Additionally, the in vitro antioxidant potential of C. olitorius seed extract using both H
2 O2 and superoxide radical scavenging activity was examined. Clinical experiments on human volunteers revealed the efficiency of the prepared C. olitorius seeds buccal fast dissolving film (CoBFDF) in relieving pain and wound healing of RMAU. Moreover, the wound healing results revealed that C. olitorius seed extract enhanced wound closure rates (p ≤ 0.001), elevated TGF-β levels and significantly downregulated TNF-α and IL-1β in comparison to the Mebo-treated group. The phenotypical results were supported by biochemical and histopathological findings, while metabolomic profiling using HR-LCMS for the crude extract of Corchorus olitorius seeds yielded a total of 21 compounds belonging to diverse chemical classes. Finally, this study highlights the potential of C. olitorius seed extract in wound repair uncovering the most probable mechanisms of action using in silico analysis. [ABSTRACT FROM AUTHOR]- Published
- 2022
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23. Cecropin a Improves the Antibacterial Activity of Hen Egg White Lysozyme against Challenging Salmonella enterica Serovars.
- Author
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Alhadrami, Hani A., Sayed, Ahmed M., Hassan, Hossam M., Rateb, Mostafa E., and Abdelkader, Karim
- Subjects
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EGG whites , *LYSOZYMES , *ANTIBACTERIAL agents , *PEPTIDES , *FOOD preservatives , *GRAM-negative bacteria , *SALMONELLA enterica , *SALMONELLA - Abstract
The prevalence of multidrug-resistant Salmonella enterica among animal- and plant-derived food products threatens global healthcare and economic sectors. Hen egg white lysozyme is widely exploited as a food preservative against Gram-positive pathogens. Nevertheless, its limited penetration of the outer membrane renders it ineffective against Gram-negative bacteria. Herein, we present a safe and effective approach to facilitate HEWL access to peptidoglycan layers using cecropin A. In silico analysis of cecropin A peptide revealed an amphipathic α-helical peptide with potential outer membrane permeabilizing activity through its interaction with both hydrophobic and ionic stabilizing forces. Evaluation of HEWL/cecropin A combination showed a cecropin A dose-dependent bacterial count reduction up to 4.16 and 3.18 ± 0.26 log units against Salmonella enterica ATCC 35664 at the logarithmic and stationary growth phases, respectively. Moreover, the combination displayed antibacterial activity of 2.1 ± 0.31 and ~1 log-unit reductions against Salmonella enterica serovars Kentucky, Typhimurium, and Enteritidis, respectively, whereas Hato and Shangani were found irresponsive. The cytotoxicity assay revealed compatibility of cecropin A with oral epithelial cells. These observations suggest HEWL/cecropin A combination as an effective and safe alternative to lysozyme against Salmonella enterica. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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24. ¹H-NMR Metabolic Profiling, Antioxidant Activity, and Docking Study of Common Medicinal Plant-Derived Honey.
- Author
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Montaser, Maha, Ali, Asmaa T., Sayed, Ahmed M., Abdelmohsen, Usama Ramadan, Zidan, Ehab W., Orfali, Raha, Rateb, Mostafa E., Zaki, Mohamed A., Hassan, Hossam M., Mohammed, Rabab, and Hifnawy, Mohamed S.
- Subjects
ORIGANUM ,METABOLITES ,CAFFEIC acid ,HONEY ,ANTIOXIDANTS ,MULTIVARIATE analysis - Abstract
The purpose of this investigation was to determine ¹H-NMR profiling and antioxidant activity of the most common types of honey, namely, citrus honey (HC1) (Morcott tangerine L. and Jaffa orange L.), marjoram honey (HM1) (Origanum majorana L.), and clover honey (HT1) (Trifolium alexandrinum L.), compared to their secondary metabolites (HC2, HM2, HT2, respectively). By using a ¹H-NMR-based metabolomic technique, PCA, and PLS-DA multivariate analysis, we found that HC2, HM2, HC1, and HM1 were clustered together. However, HT1 and HT2 were quite far from these and each other. This indicated that HC1, HM1, HC2, and HM2 have similar chemical compositions, while HT1 and HT2 were unique in their chemical profiles. Antioxidation potentials were determined colorimetrically for scavenging activities against DPPH, ABTS, ORAC, 5-LOX, and metal chelating activity in all honey extract samples and their secondary metabolites. Our results revealed that HC2 and HM2 possessed more antioxidant activities than HT2 in vitro. HC2 demonstrated the highest antioxidant effect in all assays, followed by HM2 (DPPH assay: IC
50 2.91, 10.7 μg/mL; ABTS assay: 431.2, 210.24 at 50 ug/mL Trolox equivalent; ORAC assay: 259.5, 234.8 at 50 ug/mL Trolox equivalent; 5-LOX screening assay/IC50 : 2.293, 6.136 ug/mL; and metal chelating activity at 50 ug/mL: 73.34526%, 63.75881% inhibition). We suggest that the presence of some secondary metabolites in HC and HM, such as hesperetin, linalool, and caffeic acid, increased the antioxidant activity in citrus and marjoram compared to clover honey. [ABSTRACT FROM AUTHOR]- Published
- 2022
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25. Network Pharmacological Analysis of the Red Sea Sponge Hyrtios erectus Extract to Reveal Anticancer Efficacy of Corresponding Loaded Niosomes.
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Abou-Taleb, Heba A., Sayed, Ahmed M., Refaat, Hesham, Alsenani, Faisal, Alaaeldin, Eman, Mokhtar, Fatma A., Abdelmohsen, Usama Ramadan, and Shady, Nourhan Hisham
- Abstract
In this study, the LC-HRMS-assisted chemical profiling of Hyrtios erectus sponge led to the annotation of eleven major compounds (1–11). H. erectus-derived crude extract (HE) was tested in vitro for its antiproliferative activity against three human cancer cell lines, Hep-G2 (human liver cancer cell line), MCF-7 (breast cancer cell line), and Caco-2 (colon cancer cell line), before and after encapsulation within niosomes. Hyrtios erectus extract showed moderate in vitro antiproliferative activities towards the studied cell lines with IC
50 values 18.5 ± 0.08, 15.2 ± 0.11, and 13.4 ± 0.12, respectively. The formulated extract-containing niosomes (size 142.3 ± 10.3 nm, PDI 0.279, and zeta potential 22.8 ± 1.6) increased the in vitro antiproliferative activity of the entrapped extract significantly (IC50 8.5 ± 0.04, 4.1 ± 0.07, and 3.4 ± 0.05, respectively). A subsequent computational chemical study was performed to build a sponge–metabolite–targets–cancer diseases network, by focusing on targets that possess anticancer activity toward the three cancer types: breast, colon, and liver. Pubchem, BindingDB, and DisGenet databases were used to build the network. Shinygo and KEGG databases in addition to FunRich software were used for gene ontology and functional analysis. The computational analysis linked the metabolites to 200 genes among which 147 genes related to cancer and only 64 genes are intersected in the three cancer types. The study proved that the co-occurrence of compounds 1, 2, 3, 7, 8, and 10 are the most probable compounds possessing cytotoxic activity due to large number of connections to the intersected cytotoxic genes with edges range from 9-14. The targets possess the anticancer effect through Pathways in cancer, Endocrine resistance and Proteoglycans in cancer as mentioned by KEGG and ShinyGo 7.1 databases. This study introduces niosomes as a promising strategy to promote the cytotoxic potential of H. erectus extract. [ABSTRACT FROM AUTHOR]- Published
- 2022
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26. Anti-Inflammatory and Antioxidant Properties of Malapterurus electricus Skin Fish Methanolic Extract in Arthritic Rats: Therapeutic and Protective Effects.
- Author
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Elmaidomy, Abeer H., Mohamed, Esraa M., Aly, Hanan F., Younis, Eman A., Shams, Shams Gamal Eldin, Altemani, Faisal H., Alzubaidi, Mubarak A., Almaghrabi, Mohammed, Harbi, Adnan Al, Alsenani, Faisal, Sayed, Ahmed M., and Abdelmohsen, Usama Ramadan
- Abstract
The protective and therapeutic anti-inflammatory and antioxidant potency of Malapterurus electricus (F. Malapteruridae) skin fish methanolic extract (FE) (300 mg/kg.b.wt/day for 7 days, orally) was tested in monosodium urate(MSU)-induced arthritic Wistar albino male rats' joints. Serum uric acid, TNF-α, IL-1β, NF-B, MDA, GSH, catalase, SOD, and glutathione reductase levels were all measured. According to the findings, FE significantly reduced uric acid levels and ankle swelling in both protective and therapeutic groups. Furthermore, it has anti-inflammatory effects by downregulating inflammatory cytokines, primarily through decreased oxidative stress and increased antioxidant status. All the aforementioned lesions were significantly improved in protected and treated rats with FE, according to histopathological findings. iNOS immunostaining revealed that protected and treated arthritic rats with FE had weak positive immune-reactive cells. Phytochemical analysis revealed that FE was high in fatty and amino acids. The most abundant compounds were vaccenic (24.52%), 9-octadecenoic (11.66%), palmitic (34.66%), stearic acids (14.63%), glycine (0.813 mg/100 mg), and alanine (1.645 mg/100 mg). Extensive molecular modelling and dynamics simulation experiments revealed that compound 4 has the potential to target and inhibit COX isoforms with a higher affinity for COX-2. As a result, we contend that FE could be a promising protective and therapeutic option for arthritis, aiding in the prevention and progression of this chronic inflammatory disease. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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27. New Halogenated Compounds from Halimeda macroloba Seaweed with Potential Inhibitory Activity against Malaria.
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Elmaidomy, Abeer H., Zahran, Eman Maher, Soltane, Raya, Alasiri, Ahlam, Saber, Hani, Ngwa, Che Julius, Pradel, Gabriele, Alsenani, Faisal, Sayed, Ahmed M., and Abdelmohsen, Usama Ramadan
- Subjects
MALARIA ,MARINE algae ,PLASMODIUM ,ANTIMALARIALS ,PLASMODIUM falciparum ,COMMUNICABLE diseases ,LEAD compounds - Abstract
Malaria is one of the most important infectious diseases worldwide. The causative of the most severe forms of malaria, Plasmodium falciparum, has developed resistances against all the available antimalarial drugs. In the present study, the phytochemical investigation of the green seaweed Halimeda macroloba has afforded two new compounds 1–2, along with 4 known ones 3–6. The structures of the compounds had been confirmed using 1& 2D-NMR and HRESIMS analyses. Extensive machine-learning-supported virtual-screening suggested cytochrome-C enzyme as a potential target for compound 2. Docking, absolute-binding-free-energy (ΔG
binding ) and molecular-dynamics-simulation (MDS) of compound 2 revealed the strong binding interaction of this compound with cytochrome-C. In vitro testing for crude extract and isolated compounds revealed the potential in vitro inhibitory activity of both extract and compound 2 against P. falciparum. The crude extract was able to inhibit the parasite growth with an IC50 value of 1.8 ± 0.35 µg/mL. Compound 2 also showed good inhibitory activity with an IC50 value of 3.2 ± 0.23 µg/mL. Meanwhile, compound 6 showed moderate inhibitory activity with an IC50 value of 19.3 ± 0.51 µg/mL. Accordingly, the scaffold of compound 2 can be considered as a good lead compound for the future development of new antimalarial agents. [ABSTRACT FROM AUTHOR]- Published
- 2022
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28. The Wound-Healing Potential of Olea europaea L. Cv. Arbequina Leaves Extract: An Integrated In Vitro, In Silico, and In Vivo Investigation.
- Author
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Al-Warhi, Tarfah, Elmaidomy, Abeer H., Maher, Sherif A., Abu-Baih, Dalia H., Selim, Samy, Albqmi, Mha, Al-Sanea, Mohammad M., Alnusaire, Taghreed S., Ghoneim, Mohammed M., Mostafa, Ehab M., Hussein, Shaimaa, El-Damasy, Ashraf K., Saber, Entesar Ali, Elrehany, Mahmoud A., Sayed, Ahmed M., Othman, Eman M., El-Sherbiny, Mohamed, and Abdelmohsen, Usama Ramadan
- Subjects
OLIVE ,WOUND healing ,MOLECULAR dynamics ,MATRIX metalloproteinases - Abstract
Olea europaea L. Cv. Arbequina (OEA) (Oleaceae) is an olive variety species that has received little attention. Besides our previous work for the chemical profiling of OEA leaves using LC–HRESIMS, an additional 23 compounds are identified. An excision wound model is used to measure wound healing action. Wounds are provided with OEA (2% w/v) or MEBO
® cream (marketed treatment). The wound closure rate related to vehicle-treated wounds is significantly increased by OEA. Comparing to vehicle wound tissues, significant levels of TGF-β in OEA and MEBO® (p < 0.05) are displayed by gene expression patterns, with the most significant levels in OEA-treated wounds. Proinflammatory TNF-α and IL-1β levels are substantially reduced in OEA-treated wounds. The capability of several lignan-related compounds to interact with MMP-1 is revealed by extensive in silico investigation of the major OEA compounds (i.e., inverse docking, molecular dynamics simulation, and ΔG calculation), and their role in the wound-healing process is also characterized. The potential of OEA as a potent MMP-1 inhibitor is shown in subsequent in vitro testing (IC50 = 88.0 ± 0.1 nM). In conclusion, OEA is introduced as an interesting therapeutic candidate that can effectively manage wound healing because of its anti-inflammatory and antioxidant properties. [ABSTRACT FROM AUTHOR]- Published
- 2022
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29. Solvability of a State–Dependence Functional Integro-Differential Inclusion with Delay Nonlocal Condition.
- Author
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Hassan, Taher S., Gamal Ahmed, Reda, El-Sayed, Ahmed M. A., El-Nabulsi, Rami Ahmad, Moaaz, Osama, and Mesmouli, Mouataz Billah
- Subjects
INTEGRO-differential equations ,DIFFERENTIAL equations ,DIFFERENTIAL inclusions ,MATHEMATICAL models ,INTEGRAL operators - Abstract
There is great focus on phenomena that depend on their past history or their past state. The mathematical models of these phenomena can be described by differential equations of a self-referred type. This paper is devoted to studying the solvability of a state-dependent integro-differential inclusion. The existence and uniqueness of solutions to a state-dependent functional integro-differential inclusion with delay nonlocal condition is studied. We, moreover, conclude the existence of solutions to the problem with the integral condition and the infinite-point boundary one. Some properties of the solutions are given. Finally, two examples illustrating the main result are presented. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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30. LC/MS Profiling and Gold Nanoparticle Formulation of Major Metabolites from Origanum majorana as Antibacterial and Antioxidant Potentialities.
- Author
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El-Ghorab, Ahmed H., Behery, Fathy A., Abdelgawad, Mohamed A., Alsohaimi, Ibrahim Hotan, Musa, Arafa, Mostafa, Ehab M., Altaleb, Hamud A., Althobaiti, Ibrahim O., Hamza, Mohamed, Elkomy, Mohammed H., Hamed, Ahmed A., Sayed, Ahmed M., Hassan, Hossam M., and Aboseada, Mahmoud A.
- Subjects
PHYTOCHEMICALS ,HESPERIDIN ,ORIGANUM ,ELECTROSPRAY ionization mass spectrometry ,DITERPENES ,GOLD nanoparticles ,METABOLITES ,CAFFEIC acid - Abstract
Origanum majoranum L. is a Lamiaceae medicinal plant with culinary and ethnomedical applications. Its biological and phytochemical profiles have been extensively researched. Accordingly, this study aimed to investigate the chemical composition and the antibacterial and antioxidant properties of O. majoranum high features, as well as to search for techniques for activity optimization. A metabolomics study of the crude extract of O. majoranum using liquid chromatography-high-resolution electrospray ionization mass spectrometry (LC ± HR ± ESI ± MS) was conducted. Five fractions (petroleum ether, dichloromethane, ethyl acetate, n-butanol, and aqueous) were derived from the total extract of the aerial parts. Different chromatographic methods and NMR analysis were utilized to purify and identify the isolated phenolics (high features). Moreover, the antimicrobial, antibiofilm, and antioxidant activity of phenolics were performed. Results showed that metabolomic profiling of the crude extract of O. majoranum aerial parts revealed the presence of a variety of phytochemicals, predominantly phenolics, resulting in the isolation and identification of seven high-feature compounds comprising two phenolic acids, rosmarinic and caffeic acids, one phenolic diterpene, 7-methoxyepirosmanol, in addition to four flavonoids, quercetin, hesperitin, hesperidin, and luteolin. On the other hand, 7-methoxyepirosmanol (OM
1 ) displayed the most antimicrobial and antioxidant potential. Such a phenolic principal activity improvement seems to be established after loading on gold nanoparticles. [ABSTRACT FROM AUTHOR]- Published
- 2022
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31. Wound Healing and Antioxidant Capabilities of Zizyphus mauritiana Fruits: In-Vitro, In-Vivo, and Molecular Modeling Study.
- Author
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Shady, Nourhan Hisham, Soltane, Raya, Maher, Sherif A., Saber, Entesar Ali, Elrehany, Mahmoud A., Mostafa, Yaser A., Sayed, Ahmed M., and Abdelmohsen, Usama Ramadan
- Subjects
ZIZIPHUS ,TOPICAL drug administration ,MOLECULAR docking ,FRUIT ,WOUND healing ,COLLAGEN ,PROTEIN expression - Abstract
LC-HRMS-assisted chemical profiling of Zizyphus mauritiana fruit extract (ZFE) led to the dereplication of 28 metabolites. Furthermore, wound healing activity of ZFE in 24 adult male New Zealand Dutch strain albino rabbits was investigated in-vivo supported by histopathological investigation. Additionally, the molecular mechanism was studied through different in-vitro investigations as well as, studying both relative gene expression and relative protein expression patterns. Moreover, the antioxidant activity of ZFE extract was examined using two in-vitro assays including hydrogen peroxide and superoxide radical scavenging activities that showed promising antioxidant potential. Topical application of the extract on excision wounds showed a significant increase in the wound healing rate (p < 0.001) in comparison to the untreated and MEBO
® -treated groups, enhancing TGF-β1, VEGF, Type I collagen expression, and suppressing inflammatory markers (TNF-α and IL-1β). Moreover, an in silico molecular docking against TNFα, TGFBR1, and IL-1β showed that some of the molecules identified in ZFE can bind to the three wound-healing related protein actives sites. Additionally, PASS computational calculation of antioxidant activity revealed potential activity of three phenolic compounds (Pa score > 0.5). Consequently, ZFE may be a potential alternative medication helping wound healing owing to its antioxidant and anti-inflammatory activities. [ABSTRACT FROM AUTHOR]- Published
- 2022
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32. On the De Blasi Measure of Noncompactness and Solvability of a Delay Quadratic Functional Integro-Differential Equation.
- Author
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El-Sayed, Ahmed M. A., Hamdallah, Eman M. A., and Ba-Ali, Malak M. S.
- Subjects
- *
FUNCTIONAL equations , *INTEGRO-differential equations , *QUADRATIC equations , *FUNCTIONAL differential equations - Abstract
Quadratic integro-differential equations have been discussed in many works, for instance. Some analytic results on the existence and the uniqueness of problem solutions to quadratic integro-differential equations have been investigated in different classes. Various techniques have been applied such as measure of noncompactness, Schauder's fixed point theorem and Banach contraction mapping. Here, we shall investigate quadratic functional integro-differential equations with delay. To prove the existence of solutions of the quadratic integro-differential equations, we use the technique of De Blasi measure of noncompactness. Moreover, we study some uniqueness results and continuous dependence of the solution on the initial condition and on the delay function. Some examples are presented to verify our results. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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33. Bioactive Phytochemicals of Citrus reticulata Seeds—An Example of Waste Product Rich in Healthy Skin Promoting Agents.
- Author
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Al-Warhi, Tarfah, Elmaidomy, Abeer H., Selim, Samy, Al-Sanea, Mohammad M., Albqmi, Mha, Mostafa, Ehab M., Ibrahim, Sabouni, Ghoneim, Mohammed M., Sayed, Ahmed M., and Abdelmohsen, Usama Ramadan
- Subjects
MANDARIN orange ,WASTE products ,XANTHINE oxidase ,PHENOL oxidase ,PHYTOCHEMICALS ,MOLECULAR dynamics ,SEEDS - Abstract
Phytochemical investigation of Egyptian mandarin orange (Citrus reticulata Blanco, F. Rutaceae) seeds afforded thirteen known compounds, 1–13. The structures of isolated compounds were assigned using 1D and 2D NMR and HRESIMS analyses. To characterize the pharmacological activity of these compounds, several integrated virtual screening-based and molecular dynamics simulation-based experiments were applied. As a result, compounds 2, 3 and 5 were putatively identified as hyaluronidase, xanthine oxidase and tyrosinase inhibitors. The subsequent in vitro testing was done to validate the in silico-based experiments to highlight the potential of these flavonoids as promising hyaluronidase, xanthine oxidase and tyrosinase inhibitors with IC
50 values ranging from 6.39 ± 0.36 to 73.7 ± 2.33 µM. The present study shed light on the potential of Egyptian mandarin orange's waste product (i.e., its seeds) as a skin health-promoting natural agent. Additionally, it revealed the applicability of integrated inverse docking-based virtual screening and MDS-based experiments in efficiently predicting the biological potential of natural products. [ABSTRACT FROM AUTHOR]- Published
- 2022
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34. Qualitative Study for a Delay Quadratic Functional Integro-Differential Equation of Arbitrary (Fractional) Orders.
- Author
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El-Sayed, Ahmed M. A., Hamdallah, Eman M. A., and Ba-Ali, Malak M. S.
- Subjects
- *
INTEGRO-differential equations , *FUNCTIONAL equations , *INITIAL value problems , *DIFFERENTIAL equations , *INVARIANT sets , *QUALITATIVE research - Abstract
Symmetry analysis has been applied to solve many differential equations, although determining the symmetries can be computationally intensive compared to other solution methods. In this work, we study some operators which keep the set of solutions invariant. We discuss the existence of solutions for two initial value problems of a delay quadratic functional integro-differential equation of arbitrary (fractional) orders and its corresponding integer orders equation. The existence of the maximal and the minimal solutions is proved. The sufficient condition for the uniqueness of the solutions is given. The continuous dependence of the unique solution on some data is studied. The continuation of the arbitrary (fractional) orders problem to the integer order problem is investigated. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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35. Global Existence for an Implicit Hybrid Differential Equation of Arbitrary Orders with a Delay.
- Author
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El-Sayed, Ahmed M. A., Abd El-Salam, Sheren A., and Hashem, Hind H. G.
- Subjects
- *
DIFFERENTIAL equations , *DELAY differential equations , *INTEGRAL equations - Abstract
In this paper, we present a qualitative study of an implicit fractional differential equation involving Riemann–Liouville fractional derivative with delay and its corresponding integral equation. Under some sufficient conditions, we establish the global and local existence results for that problem by applying some fixed point theorems. In addition, we have investigated the continuous and integrable solutions for that problem. Moreover, we discuss the continuous dependence of the solution on the delay function and on some data. Finally, further results and particular cases are presented. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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36. The Chemical Profiling, Docking Study, and Antimicrobial and Antibiofilm Activities of the Endophytic fungi Aspergillus sp. AP5.
- Author
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Abdelgawad, Mohamed A., Hamed, Ahmed A., Nayl, AbdElAziz A., Badawy, Mona Shaban E. M., Ghoneim, Mohammed M., Sayed, Ahmed M., Hassan, Hossam M., and Gamaleldin, Noha M.
- Abstract
Growing data suggest that Aspergillus niger, an endophytic fungus, is a rich source of natural compounds with a wide range of biological properties. This study aimed to examine the antimicrobial and antibiofilm capabilities of the Phragmites australis-derived endophyte against a set of pathogenic bacteria and fungi. The endophytic fungus Aspergillus sp. AP5 was isolated from the leaves of P. australis. The chemical profile of the fungal crude extract was identified by spectroscopic analysis using LC-HRESIMS. The fungal-derived extract was evaluated for its antimicrobial activity towards a set of pathogenic bacterial and fungal strains including Staphylococcus aureus, Pseudomonas aeruginosa, Proteus vulgaris, Klebsiella sp., Candida albicans, and Aspergillus niger. Moreover, antibiofilm activity toward four resistant biofilm-forming bacteria was also evaluated. Additionally, a neural-networking pharmacophore-based visual screening predicted the most probable bioactive compounds in the obtained extract. The AP5-EtOAc extract was found to have potent antibacterial activities against S. aureus, E. coli, and Klebsiella sp., while it exhibited low antibacterial activity toward P. Vulgaris and P. aeruginosa and displayed anticandidal activity. The AP5-EtOAc extract had significant antibiofilm activity in S. aureus, followed by P. aeruginosa. The active metabolites’ antifungal and/or antibacterial activities may be due to targeting the fungal CYP 51 and/or the bacterial Gyr-B. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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- View/download PDF
37. Aurasperone A Inhibits SARS CoV-2 In Vitro: An Integrated In Vitro and In Silico Study.
- Author
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ElNaggar, Mai H., Abdelwahab, Ghada M., Kutkat, Omnia, GabAllah, Mohamed, Ali, Mohamed A., El-Metwally, Mohamed E. A., Sayed, Ahmed M., Abdelmohsen, Usama Ramadan, and Khalil, Ashraf T.
- Abstract
Several natural products recovered from a marine-derived Aspergillus niger were tested for their inhibitory activity against SARS CoV-2 in vitro. Aurasperone A (3) was found to inhibit SARS CoV-2 efficiently (IC
50 = 12.25 µM) with comparable activity with the positive control remdesivir (IC50 = 10.11 µM). Aurasperone A exerted minimal cytotoxicity on Vero E6 cells (CC50 = 32.36 mM, SI = 2641.5) and it was found to be much safer than remdesivir (CC50 = 415.22 µM, SI = 41.07). To putatively highlight its molecular target, aurasperone A was subjected to molecular docking against several key-viral protein targets followed by a series of molecular dynamics-based in silico experiments that suggested Mpro to be its primary viral protein target. More potent anti-SARS CoV-2 Mpro inhibitors can be developed according to our findings presented in the present investigation. [ABSTRACT FROM AUTHOR]- Published
- 2022
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- View/download PDF
38. Neoechinulin A as a Promising SARS-CoV-2 M pro Inhibitor: In Vitro and In Silico Study Showing the Ability of Simulations in Discerning Active from Inactive Enzyme Inhibitors.
- Author
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Alhadrami, Hani A., Burgio, Gaia, Thissera, Bathini, Orfali, Raha, Jiffri, Suzan E., Yaseen, Mohammed, Sayed, Ahmed M., and Rateb, Mostafa E.
- Abstract
The COVID-19 pandemic and its continuing emerging variants emphasize the need to discover appropriate treatment, where vaccines alone have failed to show complete protection against the new variants of the virus. Therefore, treatment of the infected cases is critical. This paper discusses the bio-guided isolation of three indole diketopiperazine alkaloids, neoechinulin A (1), echinulin (2), and eurocristatine (3), from the Red Sea-derived Aspergillus fumigatus MR2012. Neoechinulin A (1) exhibited a potent inhibitory effect against SARS-CoV-2 M
pro with IC50 value of 0.47 μM, which is comparable to the reference standard GC376. Despite the structural similarity between the three compounds, only 1 showed a promising effect. The mechanism of inhibition is discussed in light of a series of extensive molecular docking, classical and steered molecular dynamics simulation experiments. This paper sheds light on indole diketopiperazine alkaloids as a potential structural motif against SARS-CoV-2 Mpro . Additionally, it highlights the potential of different molecular docking and molecular dynamics simulation approaches in the discrimination between active and inactive structurally related Mpro inhibitors. [ABSTRACT FROM AUTHOR]- Published
- 2022
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39. On the Weak Solutions of a Delay Composite Functional Integral Equation of Volterra-Stieltjes Type in Reflexive Banach Space.
- Author
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El-Sayed, Ahmed M. A. and Omar, Yasmin M. Y.
- Subjects
- *
INTEGRAL equations , *FUNCTIONAL equations , *BANACH spaces , *INTEGRO-differential equations , *DIFFERENTIAL equations - Abstract
Differential and integral equations in reflexive Banach spaces have gained great attention and hve been investigated in many studies and monographs. Inspired by those, we study the existence of the solution to a delay functional integral equation of Volterra-Stieltjes type and its corresponding delay-functional integro-differential equation in reflexive Banach space E. Sufficient conditions for the uniqueness of the solutions are given. The continuous dependence of the solutions on the delay function, the initial data, and some others parameters are proved. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
40. In Silico-Based Discovery of Natural Anthraquinones with Potential against Multidrug-Resistant E. coli.
- Author
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Alhadrami, Hani A., Abdulaal, Wesam H., Hassan, Hossam M., Alhakamy, Nabil A., and Sayed, Ahmed M.
- Subjects
EMODIN ,ANTHRAQUINONES ,BINDING sites ,ANTHRAQUINONE derivatives ,PLANT products ,NATURAL products - Abstract
E. coli is a Gram-negative bacterium that causes different human infections. Additionally, it resists common antibiotics due to its outer protective membrane. Natural products have been proven to be efficient antibiotics. However, plant natural products are far less explored in this regard. Accordingly, over 16,000 structures covering almost all African medicinal plants in AfroDb in a structural-based virtual screening were used to find efficient anti-E. coli candidates. These drug-like structures were docked into the active sites of two important molecular targets (i.e., E. coli's Ddl-B and Gyr-B). The top-scoring hits (i.e., got docking scores < −10 kcal/mol) produced in the initial virtual screening (0.15% of the database structures for Ddl-B and 0.17% of the database structures for Gyr-B in the database) were further refined using molecular dynamic simulation-based binding free energy (ΔG) calculation. Anthraquinones were found to prevail among the retrieved hits. Accordingly, readily available anthraquinone derivatives (10 hits) were selected, prepared, and tested in vitro against Ddl-B, Gyr-B, multidrug-resistant (MDR) E. coli, MRSA, and VRSA. A number of the tested derivatives demonstrated strong micromolar enzyme inhibition and antibacterial activity against E. coli, MRSA, and VRSA, with MIC values ranging from 2 to 64 µg/mL. Moreover, both E. coli's Ddl-B and Gyr-B were inhibited by emodin and chrysophanol with IC
50 values comparable to the reference inhibitors (IC50 = 216 ± 5.6, 236 ± 8.9 and 0.81 ± 0.3, 1.5 ± 0.5 µM for Ddl-B and Gyr-B, respectively). All of the active antibacterial anthraquinone hits showed low to moderate cellular cytotoxicity (CC50 > 50 µM) against human normal fibroblasts (WI-38). Furthermore, molecular dynamic simulation (MDS) experiments were carried out to reveal the binding modes of these inhibitors inside the active site of each enzyme. The findings presented in this study are regarded as a significant step toward developing novel antibacterial agents against MDR strains. [ABSTRACT FROM AUTHOR]- Published
- 2022
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- View/download PDF
41. Side Effects and Efficacy of COVID-19 Vaccines among the Egyptian Population.
- Author
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Elgendy, Marwa O., El-Gendy, Ahmed O., Mahmoud, Sarah, Mohammed, Tarek Yehia, Abdelrahim, Mohamed E. A., and Sayed, Ahmed M.
- Subjects
VACCINE effectiveness ,COVID-19 vaccines ,VACCINATION complications ,CORONAVIRUS diseases ,VACCINATION ,VACCINE safety - Abstract
Background: Knowledge about a vaccine's side effects and efficacy is important to improving public vaccine acceptance. This study aimed to detect the safety and efficacy of vaccines among the Egyptian population. Methodology and Results: Data was collected using an online survey from participants who took two doses of the BBIBP-CorV, ChAdOx1, or BNT162 vaccines. Pain at the vaccine injection site, muscle pain, fatigue, dizziness, fever, and headache were the most common side effects after the first and second doses. The number pf side effects was higher in ChAdOx1 than in BNT162 and BBIBP-CorV. Most of the side effects started on the first day after vaccination and persisted for 1–2 days. Vaccinated people with past coronavirus infections before vaccination developed better antibodies than those who were only vaccinated. The side-effect severity was greater after the first dose of BBIBP-CorV and ChAdOx1 than after the second dose, but in contrast, the side-effect severity was greater after the second dose of BNT162 vaccine than after the first dose. ChAdOx1 was more effective than BBIBP-CorV, and one dose of ChAdOx1 produced an immune response similar to that of two doses of BBIBP-CorV. Conclusions: Coronavirus vaccines were well-tolerated, safe, and produced an immune response against the virus in most cases. Most postvaccine side effects were mild to moderate, which indicated the building of immunity by the body for protection. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
42. An Implicit Hybrid Delay Functional Integral Equation: Existence of Integrable Solutions and Continuous Dependence.
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El-Sayed, Ahmed M. A., Hashem, Hind H. G., and Al-Issa, Shorouk M.
- Subjects
- *
FUNCTIONAL equations , *INTEGRAL equations - Abstract
In this work, we are discussing the solvability of an implicit hybrid delay nonlinear functional integral equation. We prove the existence of integrable solutions by using the well known technique of measure of noncompactnes. Next, we give the sufficient conditions of the uniqueness of the solution and continuous dependence of the solution on the delay function and on some functions. Finally, we present some examples to illustrate our results. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
43. On a Neutral It ô and Arbitrary (Fractional) Orders Stochastic Differential Equation with Nonlocal Condition.
- Author
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El-Sayed, Ahmed M. A. and Fouad, Hoda A.
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- *
STOCHASTIC differential equations , *NONLINEAR integral equations , *NONLINEAR theories , *DERIVATIVES (Mathematics) , *DIFFERENTIAL calculus - Abstract
In this paper, we are concerned with the combinations of the stochastic Itô-differential and the arbitrary (fractional) orders derivatives in a neutral differential equation with a stochastic, nonlinear, nonlocal integral condition. The existence of solutions will be proved. The sufficient conditions for the uniqueness of the solution will be given. The continuous dependence of the unique solution will be studied. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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- View/download PDF
44. An In Vitro and In Silico Study of the Enhanced Antiproliferative and Pro-Oxidant Potential of Olea europaea L. cv. Arbosana Leaf Extract via Elastic Nanovesicles (Spanlastics).
- Author
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Alnusaire, Taghreed S., Sayed, Ahmed M., Elmaidomy, Abeer H., Al-Sanea, Mohammad M., Albogami, Sarah, Albqmi, Mha, Alowaiesh, Bassam F., Mostafa, Ehab M., Musa, Arafa, Youssif, Khayrya A., Refaat, Hesham, Othman, Eman M., Dandekar, Thomas, Alaaeldin, Eman, Ghoneim, Mohammed M., and Abdelmohsen, Usama Ramadan
- Subjects
OLIVE ,GLUTATHIONE reductase ,SUPEROXIDE dismutase ,ZETA potential ,MOLECULAR dynamics ,CELL lines ,METAL spraying - Abstract
The olive tree is a venerable Mediterranean plant and often used in traditional medicine. The main aim of the present study was to evaluate the effect of Olea europaea L. cv. Arbosana leaf extract (OLE) and its encapsulation within a spanlastic dosage form on the improvement of its pro-oxidant and antiproliferative activity against HepG-2, MCF-7, and Caco-2 human cancer cell lines. The LC-HRESIMS-assisted metabolomic profile of OLE putatively annotated 20 major metabolites and showed considerable in vitro antiproliferative activity against HepG-2, MCF-7, and Caco-2 cell lines with IC
50 values of 9.2 ± 0.8, 7.1 ± 0.9, and 6.5 ± 0.7 µg/mL, respectively. The encapsulation of OLE within a (spanlastic) nanocarrier system, using a spraying method and Span 40 and Tween 80 (4:1 molar ratio), was successfully carried out (size 41 ± 2.4 nm, zeta potential 13.6 ± 2.5, and EE 61.43 ± 2.03%). OLE showed enhanced thermal stability, and an improved in vitro antiproliferative effect against HepG-2, MCF-7, and Caco-2 (IC50 3.6 ± 0.2, 2.3 ± 0.1, and 1.8 ± 0.1 µg/mL, respectively) in comparison to the unprocessed extract. Both preparations were found to exhibit pro-oxidant potential inside the cancer cells, through the potential inhibitory activity of OLE against glutathione reductase and superoxide dismutase (IC50 1.18 ± 0.12 and 2.33 ± 0.19 µg/mL, respectively). These inhibitory activities were proposed via a comprehensive in silico study to be linked to the presence of certain compounds in OLE. Consequently, we assume that formulating such a herbal extract within a suitable nanocarrier would be a promising improvement of its therapeutic potential. [ABSTRACT FROM AUTHOR]- Published
- 2021
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- View/download PDF
45. New Sufficient Conditions for Oscillation of Second-Order Neutral Delay Differential Equations.
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Hassan, Taher S., Moaaz, Osama, Nabih, Amany, Mesmouli, Mouataz Billah, and El-Sayed, Ahmed M. A.
- Subjects
DELAY differential equations ,FUNCTIONAL differential equations ,OSCILLATIONS ,OPERATOR equations - Abstract
In this work, new sufficient conditions for the oscillation of all solutions of the second-order neutral delay differential equations with the non-canonical operator are established. Using a generalized Riccati substitution, we obtained criteria that complement and extend some previous results in the literature. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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- View/download PDF
46. On a Boundary Value Problem of Hybrid Functional Differential Inclusion with Nonlocal Integral Condition.
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El-Sayed, Ahmed M. A., El-Sayed, Wagdy G., and S. Amrajaa, Somyya
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BOUNDARY value problems , *DIFFERENTIAL inclusions , *INTEGRALS , *DIFFERENTIAL-difference equations - Abstract
In this work, we present a boundary value problem of hybrid functional differential inclusion with nonlocal condition. The boundary conditions of integral and infinite points will be deduced. The existence of solutions and its maximal and minimal will be proved. A sufficient condition for uniqueness of the solution is given. The continuous dependence of the unique solution will be studied. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
47. Anticancer Potential of Green Synthesized Silver Nanoparticles of the Soft Coral Cladiella pachyclados Supported by Network Pharmacology and In Silico Analyses.
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Alhadrami, Hani A., Alkhatabi, Heba, Abduljabbar, Fahad H., Abdelmohsen, Usama Ramadan, and Sayed, Ahmed M.
- Subjects
SILVER nanoparticles ,ALCYONACEA ,MARINE natural products ,CELLULAR signal transduction ,SOCIAL networks ,ETHYL acetate - Abstract
Cladiella-derived natural products have shown promising anticancer properties against many human cancer cell lines. In the present investigation, we found that an ethyl acetate extract of Cladiella pachyclados (CE) collected from the Red Sea could inhibit the human breast cancer (BC) cells (MCF and MDA-MB-231) in vitro (IC
50 24.32 ± 1.1 and 9.55 ± 0.19 µg/mL, respectively). The subsequent incorporation of the Cladiella extract into the green synthesis of silver nanoparticles (AgNPs) resulted in significantly more activity against both cancer cell lines (IC50 5.62 ± 0.89 and 1.72 ± 0.36, respectively); the efficacy was comparable to that of doxorubicin with much-enhanced selectivity. To explore the mode of action of this extract, various in silico and network-pharmacology-based analyses were performed in the light of the LC-HRESIMS-identified compounds in the CE extract. Firstly, using two independent machine-learning-based prediction software platforms, most of the identified compounds in CE were predicted to inhibit both MCF7 and MDA-MB-231. Moreover, they were predicted to have low toxicity towards normal cell lines. Secondly, approximately 242 BC-related molecular targets were collected from various databases and used to construct a protein–protein interaction (PPI) network, which revealed the most important molecular targets and signaling pathways in the pathogenesis of BC. All the identified compounds in the extract were then subjected to inverse docking against all proteins hosted in the Protein Data bank (PDB) to discover the BC-related proteins that these compounds can target. Approximately, 10.74% of the collected BC-related proteins were potential targets for 70% of the compounds identified in CE. Further validation of the docking results using molecular dynamic simulations (MDS) and binding free energy calculations revealed that only 2.47% of the collected BC-related proteins could be targeted by 30% of the CE-derived compounds. According to docking and MDS experiments, protein-pathway and compound-protein interaction networks were constructed to determine the signaling pathways that the CE compounds could influence. This paper highlights the potential of marine natural products as effective anticancer agents and reports the discovery of novel anti-breast cancer AgNPs. [ABSTRACT FROM AUTHOR]- Published
- 2021
- Full Text
- View/download PDF
48. Efficacy of Ceftazidime and Cefepime in the Management of COVID-19 Patients: Single Center Report from Egypt.
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Eid, Ragaey A., Elgendy, Marwa O., El-Gendy, Ahmed O., Elgendy, Sara O., Belbahri, Lassaad, Sayed, Ahmed M., and Rateb, Mostafa E.
- Subjects
COVID-19 ,CEFEPIME ,CEFTAZIDIME ,COVID-19 pandemic ,SARS-CoV-2 - Abstract
The purpose of this study was to explore the value of using cefepime and ceftazidime in treating patients with COVID-19. A total of 370 (162 males) patients, with RT-PCR-confirmed cases of COVID-19, were included in the study. Out of them, 260 patients were treated with cefepime or ceftazidime, with the addition of steroids to the treatment. Patients were divided into three groups: Group 1: patients treated with cefepime (124 patients); Group 2: patients treated with ceftazidime (136 patients); Group 3 (control group): patients treated according to the WHO guidelines and the Egyptian COVID-19 management protocol (110 patients)/ Each group was classified into three age groups: 18–30, 31–60, and >60 years. The dose of either cefepime or ceftazidime was 1000 mg twice daily for five days. Eight milligrams of dexamethasone were used as the steroidal drug. Careful follow-ups for the patients were carried out. In vitro and in silico M
pro enzyme assays were performed to investigate the antiviral potential of both antibiotics. The mean recovery time for Group 1 was 12 days, for Group 2 was 13 days, and for Group 3 (control) was 19 days. No deaths were recorded, and all patients were recovered without any complications. For Group 1, the recovery time was 10, 12, and 16 days for the age groups 18–30, 30–60, and >60 years, respectively. For Group 2, the recovery time was 11, 13, and 15 days for the age groups 18–30, 30–60, and >60 years, respectively. For Group 3 (control), the recovery time was 15, 16, and 17 days for the age groups 18–30, 30–60, and >60 years, respectively. Both ceftazidime and cefepime showed very good inhibitory activity towards SARS CoV-2′s Mpro , with IC50 values of 1.81 µM and 8.53 µM, respectively. In conclusion, ceftazidime and cefepime are efficient for the management of moderate and severe cases of COVID-19 due to their potential anti-SARS CoV-2 activity and low side effects, and, hence, the currently used complex multidrug treatment protocol can be replaced by the simpler one proposed in this study. [ABSTRACT FROM AUTHOR]- Published
- 2021
- Full Text
- View/download PDF
49. Wound Healing Metabolites from Peters' Elephant-Nose Fish Oil: An In Vivo Investigation Supported by In Vitro and In Silico Studies.
- Author
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Alsenani, Faisal, Ashour, Ahmed M., Alzubaidi, Mubarak A., Azmy, Ahmed F., Hetta, Mona H., Abu-Baih, Dalia H., Elrehany, Mahmoud A., Zayed, Ahmed, Sayed, Ahmed M., Abdelmohsen, Usama Ramadan, and Elmaidomy, Abeer H.
- Abstract
Gnathonemuspetersii (F. Mormyridae) commonly known as Peters' elephant-nose fish is a freshwater elephant fish native to West and Central African rivers. The present research aimed at metabolic profiling of its derived crude oil via GC-MS analysis. In addition, wound healing aptitude in adult male New Zealand Dutch strain albino rabbits along with isolated bioactive compounds in comparison with a commercial product (Mebo
® ). The molecular mechanism was studied through a number of in vitro investigations, i.e., radical scavenging and inhibition of COX enzymes, in addition to in silico molecular docking study. The results revealed a total of 35 identified (71.11%) compounds in the fish oil, belonging to fatty acids (59.57%), sterols (6.11%), and alkanes (5.43%). Phytochemical investigation of the crude oil afforded isolation of six compounds 1–6. Moreover, the crude oil showed significant in vitro hydrogen peroxide and superoxide radical scavenging activities. Furthermore, the crude oil along with one of its major components (compound 4) exhibited selective inhibitory activity towards COX-2 with IC50 values of 15.27 and 2.41 µM, respectively. Topical application of the crude oil on excision wounds showed a significant (p < 0.05) increase in the wound healing rate in comparison to the untreated and Mebo® -treated groups, where fish oil increased the TGF-β1 expression, down-regulated TNF-α, and IL-1β. Accordingly, Peters' elephant-nose fish oil may be a potential alternative medication helping wound healing owing to its antioxidant and anti-inflammatory activities. [ABSTRACT FROM AUTHOR]- Published
- 2021
- Full Text
- View/download PDF
50. Bioguided Isolation of Cyclopenin Analogues as Potential SARS-CoV-2 M pro Inhibitors from Penicillium citrinum TDPEF34.
- Author
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Thissera, Bathini, Sayed, Ahmed M., Hassan, Marwa H. A., Abdelwahab, Sayed F., Amaeze, Ngozi, Semler, Valeria T., Alenezi, Faizah N., Yaseen, Mohammed, Alhadrami, Hani A., Belbahri, Lassaad, and Rateb, Mostafa E.
- Subjects
- *
SARS-CoV-2 , *PENICILLIUM , *BINDING sites , *VIRUS diseases , *VIRAL mutation , *VIRUS removal (Water purification) - Abstract
SARS-CoV-2 virus mutations might increase its virulence, and thus the severity and duration of the ongoing pandemic. Global drug discovery campaigns have successfully developed several vaccines to reduce the number of infections by the virus. However, finding a small molecule pharmaceutical that is effective in inhibiting SARS-CoV-2 remains a challenge. Natural products are the origin of many currently used pharmaceuticals and, for this reason, a library of in-house fungal extracts were screened to assess their potential to inhibit the main viral protease Mpro in vitro. The extract of Penicillium citrinum, TDPEF34, showed potential inhibition and was further analysed to identify potential Mpro inhibitors. Following bio-guided isolation, a series of benzodiazepine alkaloids cyclopenins with good-to-moderate activity against SARS-CoV-2 Mpro were identified. The mode of enzyme inhibition of these compounds was predicted by docking and molecular dynamic simulation. Compounds 1 (isolated as two conformers of S- and R-isomers), 2, and 4 were found to have promising in vitro inhibitory activity towards Mpro, with an IC50 values range of 0.36–0.89 µM comparable to the positive control GC376. The in silico investigation revealed compounds to achieve stable binding with the enzyme active site through multiple H-bonding and hydrophobic interactions. Additionally, the isolated compounds showed very good drug-likeness and ADMET properties. Our findings could be utilized in further in vitro and in vivo investigations to produce anti-SARS-CoV-2 drug candidates. These findings also provide critical structural information that could be used in the future for designing potent Mpro inhibitors. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
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