843 results on '"Mushtaq, A"'
Search Results
2. Transcriptomic Insights into Salt Stress Response in Two Pepper Species: The Role of MAPK and Plant Hormone Signaling Pathways
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Muhammad Aamir Farooq, Muhammad Zeeshan Ul Haq, Liping Zhang, Shuhua Wu, Naveed Mushtaq, Hassam Tahir, and Zhiwei Wang
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pepper ,salt stress ,transcriptome ,WGCNA ,enzymatic antioxidants ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Salt stress imposes significant plant limitations, altering their molecular, physiological, and biochemical functions. Pepper, a valuable herbaceous plant species of the Solanaceae family, is particularly susceptible to salt stress. This study aimed to elucidate the physiological and molecular mechanisms that contribute to the development of salt tolerance in two pepper species (Capsicum baccatum (moderate salt tolerant) and Capsicum chinense (salt sensitive)) through a transcriptome and weighted gene co-expression network analysis (WGCNA) approach to provide detailed insights. A continuous increase in malondialdehyde (MDA) and hydrogen peroxide (H2O2) levels in C. chinense and higher activities of catalase (CAT), superoxide dismutase (SOD), and peroxidase (POD) in C. baccatum indicated more tissue damage in C. chinense than in C. baccatum. In transcriptome analysis, we identified 39 DEGs related to salt stress. Meanwhile, KEGG pathway analysis revealed enrichment of MAPK and hormone signaling pathways, with six DEGs each. Through WGCNA, the ME.red module was identified as positively correlated. Moreover, 10 genes, A-ARR (CQW23_24856), CHIb (CQW23_04881), ERF1b (CQW23_08898), PP2C (CQW23_15893), ABI5 (CQW23_29948), P450 (CQW23_16085), Aldedh1 (CQW23_06433), GDA (CQW23_12764), Aldedh2 (CQW23_14182), and Aldedh3 (CQW23_11481), were validated by qRT-PCR. This study provides valuable insights into the genetic mechanisms underlying salt stress tolerance in pepper. It offers potential targets for future breeding efforts to enhance salt stress resilience in this crop.
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- 2024
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3. Optimizing Two-Dimensional Irregular Pattern Packing with Advanced Overlap Optimization Techniques
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Longhui Meng, Liang Ding, Aqib Mashood Khan, Ray Tahir Mushtaq, and Mohammed Alkahtani
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irregular packing ,modified genetic algorithm ,overlap detection ,spatial efficiency ,iterative optimization ,Mathematics ,QA1-939 - Abstract
This research introduces the Iterative Overlap Optimization Placement (IOOP) method, a novel approach designed to enhance the efficiency of irregular pattern packing by dynamically optimizing overlap ratios and pattern placements. Utilizing a modified genetic algorithm, IOOP addresses the complexities of arranging irregular patterns in a given space, focusing on improving spatial and material efficiency. This study demonstrates the method’s superiority over the traditional Size-First Non-Iterative Overlap Optimization Placement technique through comparative analysis, highlighting significant improvements in spatial utilization, flexibility, and material conservation. The effectiveness of IOOP is further validated by its robustness in handling diverse pattern groups and its adaptability in adjusting pattern placements iteratively. This research not only showcases the potential of IOOP in manufacturing and design processes requiring precise spatial planning but also opens avenues for its application across various industries, underscoring the need for further exploration into advanced technological integrations for tackling complex spatial optimization challenges.
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- 2024
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4. Cloning, Expression, and Characterization of a Metalloprotease from Thermophilic Bacterium Streptomyces thermovulgaris
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Amna Mushtaq, Sibtain Ahmed, Tahir Mehmood, Jorge Cruz-Reyes, Amer Jamil, and Shafaq Nawaz
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neutral protease B ,thermophile ,Streptomyces thermovulgaris ,proteolytic enzyme ,cloning ,expression and characterization ,Biology (General) ,QH301-705.5 - Abstract
Proteases hydrolyze proteins and reduce them to smaller peptides or amino acids. Besides many biological processes, proteases play a crucial in different industrial applications. A 792 bp protease gene (nprB) from the thermophilic bacterium Streptomyces thermovulgaris was cloned and expressed in E. coli BL21 using pET 50b (+). Optimal recombinant protease expression was observed at 1 mM IPTG, 37 °C for 4 h. The resulting protease was observed in soluble form. The molecular mass estimated by SDS-PAGE and Western blot analysis of the protease (NprB) fused with His and Nus tag is ~70 KDa. The protease protein was purified by Ammonium sulfate precipitation and immobilized metal ion affinity chromatography. The optimum pH and temperature for protease activity using casein as substrate were 7.2 and 70 °C, respectively. The mature protease was active and retained 80% of its activity in a broad spectrum of pH 6–8 after 4 h of incubation. Also, the half-life of the protease at 70 °C was 4 h. EDTA (5 mM) completely inhibited the enzyme, proving the isolated protease was a metalloprotease. NprB activity was enhanced in the presence of Zn2+, Mn2+, Fe2+ and Ca2+, while Hg2+ and Ni2+ decreased its activity. Exposure to organic solvents did not affect the protease activity. The recombinant protease was stable in the presence of 10% organic solvents and surfactants. Further characterization showed that zinc-metalloprotease is promising for the detergent, laundry, leather, and pharmaceutical industries.
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- 2024
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5. Land Cover and Land Use Ontology—Evolution of International Standards, Challenges, and Opportunities
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Fatima Mushtaq, C. Douglas O’Brien, Peter Parslow, Mats Åhlin, Antonio Di Gregorio, John S. Latham, and Matieu Henry
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interoperability ,land characterization ,geospatial ,semantic ontology ,harmonization ,classification ,Agriculture - Abstract
Knowledge of land is of central importance to manage the impact of mankind upon the environment. The understanding and treatment of land vary greatly across different regions and communities, making the description of land highly specific to each locality. To address the larger global issues, such as world food production or climate change mitigation, one needs to have a common standardized understanding of the biosphere cover and use of land. Different governments and institutions established national systems to describe thematic content of land within their jurisdictions. These systems are all valid and tuned to address various national needs. However, their integration at regional or global levels is lacking. Integrating data from widely divergent sources to create world datasets not only requires standards, but also an approach to integrate national and regional land cover classification systems. The ISO 19144 series, developed through the collaboration between the Food and Agriculture Organization of the United Nations (FAO) and the International Organization for Standardization (ISO), offers a meta-language for the integration of disparate land classification systems, enhancing interoperability, data sharing, and national to global data integration and comparison. This paper provides an overview of classification system concepts, different stages for the development of standards in ISO and the status of different standards in the ISO 19144 series. It also explores the critical role of the ISO 19144 series in standardizing land cover and land use classification systems. Drawing on practical case studies, the paper underscores the series’ potential to support global sustainable development goals and lays out a path for its future development and application. Using these standards, we gain not only a tool for harmonizing land classification, but also a critical level for advancing sustainable development and environmental stewardship worldwide.
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- 2024
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6. Improving Wheat Yield with Zeolite and Tillage Practices under Rain-Fed Conditions
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Mehmood ul Hassan, Syed Tanveer Shah, Abdul Basit, Wafaa M. Hikal, Mushtaq Ahmad Khan, Waleed Khan, Kirill G. Tkachenko, Faiçal Brini, and Hussein A. H. Said-Al Ahl
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dissolved organic carbon ,soil organic carbon ,tillage ,zeolite ,wheat ,Agriculture - Abstract
Wheat is the most consumed crop worldwide. Zeolite application combined with good tillage practices are good combinations that provide better soil conditions for wheat crops. Zeolite also provides a good layer for carbon to be absorbed into the soil and can retain carbon for hundreds of years. The current study aimed to investigate the effect of tillage practices and zeolite treatments on soil carbon retention and wheat crop productivity. Arranging the treatments implemented according to a factorial randomized block design which includes three replications. Tillage treatments include three levels vis: T1= 6 tillage practices with the help of cultivator (farmer practice/control), T2 (minimum tillage), and T3 (2 cultivation with cultivator + Mold-board plough). The zeolite applications consist of four levels: Z1 = 0, Z2 = 5, Z3 = 10 and Z4 = 15 t ha−1. The effect of the interaction between zeolite treatments and tillage practices on various factors related to soil and crops such as emission of carbon dioxide (CO2), dissolved organic carbon, soil organic carbon, and the productivity and components of wheat productivity. Zeolite applied at 10 t ha−1 in combination with minimum tillage gave significant differences in terms of CO2 emission, dissolved organic carbon, and on soil organic carbon. The experimental results showed that minimum CO2 emission (25.43 and 31.12 (kg CO2-C ha−1 h−1), dissolved organic carbon (4.80 and 4.90 g C kg−1), soil organic carbon (7.88 and 7.97 g C kg−1), plant height (92.14 and 92.97 cm), spike length (11.88 ad 12.11 cm), number of spikelets (20.11 and 20.98), number of tillers (278.65 and 283.93) per unit area, 1000 grain weight (50.74 and 51.54 g), biological yield (8134.87 and 8187.38 kg ha−1) and grain yield (2984.28 and 3028.96 kg ha−1) and harvest index (36.69 and 37.04%) of wheat was observed in zeolite applied at 10 t ha−1 with minimum tillage practice (T2 × Z3) compared to control and other treatments for both the years, respectively. It is therefore concluded that minimum tillage should be practiced in wheat crops with the application of zeolite at 10 t ha−1 to obtain better yield and soil carbon retention under rain-fed conditions.
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- 2024
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7. GaitSTAR: Spatial–Temporal Attention-Based Feature-Reweighting Architecture for Human Gait Recognition
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Muhammad Bilal, He Jianbiao, Husnain Mushtaq, Muhammad Asim, Gauhar Ali, and Mohammed ElAffendi
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computer vision ,human gait recognition ,feature aggregation ,feature set transformation ,feature fusion ,dynamic feature reweighting ,Mathematics ,QA1-939 - Abstract
Human gait recognition (HGR) leverages unique gait patterns to identify individuals, but the effectiveness of this technique can be hindered due to various factors such as carrying conditions, foot shadows, clothing variations, and changes in viewing angles. Traditional silhouette-based systems often neglect the critical role of instantaneous gait motion, which is essential for distinguishing individuals with similar features. We introduce the ”Enhanced Gait Feature Extraction Framework (GaitSTAR)”, a novel method that incorporates dynamic feature weighting through the discriminant analysis of temporal and spatial features within a channel-wise architecture. Key innovations in GaitSTAR include dynamic stride flow representation (DSFR) to address silhouette distortion, a transformer-based feature set transformation (FST) for integrating image-level features into set-level features, and dynamic feature reweighting (DFR) for capturing long-range interactions. DFR enhances contextual understanding and improves detection accuracy by computing attention distributions across channel dimensions. Empirical evaluations show that GaitSTAR achieves impressive accuracies of 98.5%, 98.0%, and 92.7% under NM, BG, and CL conditions, respectively, with the CASIA-B dataset; 67.3% with the CASIA-C dataset; and 54.21% with the Gait3D dataset. Despite its complexity, GaitSTAR demonstrates a favorable balance between accuracy and computational efficiency, making it a powerful tool for biometric identification based on gait patterns.
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- 2024
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8. Staphylococcus spp. in Salad Vegetables: Biodiversity, Antimicrobial Resistance, and First Identification of Methicillin-Resistant Strains in the United Arab Emirates Food Supply
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Ihab Habib, Glindya Bhagya Lakshmi, Mohamed-Yousif Ibrahim Mohamed, Akela Ghazawi, Mushtaq Khan, Rami H. Al-Rifai, Afra Abdalla, Febin Anes, Mohammed Elbediwi, Hazim O. Khalifa, and Abiola Senok
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fresh produce ,United Arab Emirates ,food safety ,antimicrobial resistance ,Staphylococci ,Chemical technology ,TP1-1185 - Abstract
Contamination of leafy greens with Staphylococcus spp. can occur at various supply chain stages, from farm to table. This study comprehensively analyzes the species diversity, antimicrobial resistance, and virulence factors of Staphylococci in salad vegetables from markets in the United Arab Emirates (UAE). A total of 343 salad items were sampled from three major cities in the UAE from May 2022 to February 2023 and tested for the presence of Staphylococcus spp. using standard culture-based methods. Species-level identification was achieved using matrix-assisted laser desorption ionization-time of flight mass spectrometry. Antimicrobial susceptibility testing was conducted using the VITEK-2 system with AST-P592 cards. Additionally, whole genome sequencing (WGS) of ten selected isolates was performed to characterize antimicrobial resistance determinants and toxin-related virulence factors. Nine Staphylococcus species were identified in 37.6% (129/343) of the tested salad items, with coagulase-negative staphylococci (CoNS) dominating (87.6% [113/129]) and S. xylosus being the most prevalent (89.4% [101/113]). S. aureus was found in 4.6% (14/343) of the salad samples, averaging 1.7 log10 CFU/g. One isolate was confirmed as methicillin-resistant S. aureus, harboring the mecA gene. It belonged to multi-locus sequence type ST-672 and spa type t384 and was isolated from imported fresh dill. Among the characterized S. xylosus (n = 45), 13.3% tested positive in the cefoxitin screen test, and 6.6% were non-susceptible to oxacillin. WGS analysis revealed that the cytolysin gene (cylR2) was the only toxin-associated factor found in S. xylosus, while a methicillin-sensitive S. aureus isolate harbored the Panton-Valentine Leukocidin (LukSF/PVL) gene. This research is the first to document the presence of methicillin-resistant S. aureus in the UAE food chain. Furthermore, S. xylosus (a coagulase-negative staphylococcus not commonly screened in food) has demonstrated phenotypic resistance to clinically relevant antimicrobials. This underscores the need for vigilant monitoring of antimicrobial resistance in bacterial contaminants, whether pathogenic or commensal, at the human-food interface.
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- 2024
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9. Predicting Soil Carbon Sequestration and Harvestable C-Biomass of Rice and Wheat by DNDC Model
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Muhammad Shaukat, Aaron Kinyu Hoshide, Sher Muhammad, Irshad Ahmad Arshad, Muhammad Mushtaq, and Daniel Carneiro de Abreu
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biogeochemical models ,DNDC model ,inorganic fertilizers ,soil organic carbon ,Agriculture (General) ,S1-972 - Abstract
Several biogeochemical models have been applied to understand the potential effects of management practices on soil organic carbon (SOC) sequestration, crop growth, and yield. In this study, the denitrification and decomposition (DNDC) model was used to simulate soil SOC dynamics and harvested C-biomass in rice–wheat rotation under organic/inorganic fertilization with conventional tillage (CT) and reduced tillage (RT). Before calibration, DNDC underpredicted harvestable grain C-biomass of rice where percent difference (PD) varied from 29.22% to 42.14%, and over-simulated grain C-biomass of wheat where PD was −55.01% with 50% nitrogen–phosphorus–potassium (NPK) and 50% animal manure applied under the CT treatment. However, after calibration by adjusting default values of soil and crop parameters, DNDC simulated harvestable grain C-biomass of both crops very close to observed values (e.g., average PD ranged from −2.81% to −6.17%). DNDC also predicted the effects of nutrient management practices on grain C-biomass of rice/wheat under CT/RT using d-index (0.76 to 0.96) and the calculated root mean squared error (RMSE of 165.36 to 494.18 kg C ha−1). DNDC simulated SOC trends for rice–wheat using measured values of several statistical indices. Regression analysis between modeled and observed SOC dynamics was significant with R2 ranging from 0.35 to 0.46 (p < 0.01), and intercept ranging from 0.30 to 1.34 (p < 0.65). DNDC demonstrated that combined inorganic and organic fertilization may result in higher C-biomass and more SOC sequestration in rice–wheat systems.
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- 2023
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10. Maximizing Degumming Efficiency for Firmiana simplex Bark Using Deep Eutectic Solvents
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Amjad Farooq, Muhammad Tauseef Khawar, Zongqian Wang, Mingwei Tian, and Muhammad Mushtaq
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deep eutectic solvents ,degumming ,choline chloride ,urea ,firmiana simplex bark ,Organic chemistry ,QD241-441 - Abstract
Degumming is a critical process in the purification of natural fibers, essential for enhancing their quality and usability across various applications. Traditional degumming methods employed for natural fibers encounter inherent limitations, encompassing prolonged procedures, excessive energy consumption, adverse environmental impact, and subpar efficiency. To address these challenges, a groundbreaking wave of degumming technique has emerged, transcending these constraints and heralding a new era of efficiency, sustainability, and eco-friendly techniques. This study represents the Firmiana simplex bark (FSB) fiber’s delignification by using deep eutectic solvents (DESs). The study explores the application of deep eutectic solvents, by synthesizing different types of DES using a hydrogen bond acceptor (HBA) and four representative hydrogen bond donors (HBDs) for FSB fiber degumming. This study investigates the morphologies, chemical compositions, crystallinities, and physical properties of Firmiana simplex bark fibers before and after the treatment. Furthermore, the effects and mechanisms of different DESs on dispersing FSB fibers were examined. The experimental results showed that choline chloride-urea (CU)-based DES initiates the degumming process by effectively disrupting the hydrogen bond interaction within FSB fibers, primarily by outcompeting chloride ions. Following this initial step, the DES acts by deprotonating phenolic hydroxyl groups and cleaving β-O-4 bonds present in diverse lignin units, thereby facilitating the efficient removal of lignin from the fibers. This innovative approach resulted in significantly higher degumming efficiency and ecofriendly as compared to traditional methods. Additionally, the results revealed that CU-based DES exhibits the utmost effectiveness in degumming FSB fibers. The optimal degumming conditions involve a precise processing temperature of 160 °C and a carefully controlled reaction time of 2 h yielding the most favorable outcomes. The present study presents a novel straightforward and environmentally friendly degumming method for Firmiana simplex bark, offering a substantial potential for enhancing the overall quality and usability of the resulting fibers. Our findings open new pathways for sustainable fiber-processing technologies.
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- 2024
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11. Impact of Varying Dietary Calcium Contents on the Gut Metabolomics of Yunnan Semi-Fine Wool Sheep (Ovis aries)
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Muhammad Khan, Xiaoqi Zhao, Xiaojun Ni, Sikandar Ali, Baiji Danzeng, Hongyuan Yang, Maida Mushtaq, Jiachong Liang, Bai Xue, and Guobo Quan
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dietary calcium ,metabolite ,metabolic pathways ,nutritional requirement ,sheep ,Microbiology ,QR1-502 - Abstract
Yunnan semi-fine wool (YSFW) is a recently developed dual-purpose (meat and wool) sheep breed mainly found in Yunnan Province, China. Moreover, dietary calcium is essential for animal health and productivity. The current experiment aimed to investigate the impact of dietary calcium on sheep gut metabolite profile. For this, thirty YSFW rams (male, age = 10 months, and body weight = 40.37 ± 0.49 kg) were randomized into three groups (n = 10 rams/group), followed by a completely randomized design, and the groups were allotted to one of three dietary calcium levels (Q_1 = 0.50%, Q_3 = 0.73%, and Q_5 = 0.98% on a dry basis). The rams were fed ad libitum by feeding twice a day (at 08:00 and 17:00 h/day) throughout the experimental period (44 day). On the 21st day of the experiment, fecal samples were collected from 27 rams (9/group) and untargeted metabolite profiling was performed by using ultra-performance liquid chromatography. The PCA plot showed that the Q_5 group metabolites were clustered more tightly than for Q_1 and Q_3, respectively. The tightly clustering molecules were mainly alkaloids and their derivatives, benzenoids, lignans and related compounds, lipids, nucleotides, organic acids, and nitrogenous-based derivatives. According to the Kyoto Encyclopedia of Genes and Genomes pathway analysis, these molecules potentially contribute to metabolic pathways, biosynthesis of secondary metabolites, proteinaceous compounds, and the metabolism of the protein derivatives, particularly amino acids. The PLS-DA plots revealed a significant difference between the Q_1, Q_3, and Q_5 groups, suggesting that Q_5 had a clear separation across the groups. Based on the metabolomic analysis, feeding different levels of dietary calcium significantly changed the metabolomic profile of YSFW rams, which primarily entails metabolic pathways such as energy, protein, and lipid metabolism.
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- 2024
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12. Antimycobacterial and Anticancer Properties of Myrtus communis Leaf Extract
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Mushtaq Ahmad Mir, Lamis Ahmad Memish, Serag Eldin Elbehairi, Nasreena Bashir, Faris Saif Masoud, Ali A. Shati, Mohammad Y. Alfaifi, Ahmad M. Alamri, Sultan Ahmad Alkahtani, and Irfan Ahmad
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Myrtus communis ,anticancer ,apoptosis ,antibacterial ,biofilm ,Medicine ,Pharmacy and materia medica ,RS1-441 - Abstract
Background: Plant-derived products or extracts are widely used in folk/traditional medicine to treat several infections, ailments, or disorders. A well-known medicinal herb, Myrtus communis is an evergreen fragrant plant native to the Mediterranean region that has been used for ages in traditional medicine around the world. Materials and methods: The microplate alamarBlue assay and the well diffusion method were used to evaluate the zone of inhibition and MIC, respectively. The double-disc diffusion method was used to investigate the synergy between antibiotics and the extract. The crystal violet method was used to investigate biofilm development. The SulphoRhodamine-B assay and DNA flow cytometry were used to investigate the proliferation and subsequent distribution of cells among different phases of the cell cycle. The apoptotic and necrotic phases of the cancer cells were examined using flow cytometry in conjunction with Annexin V-FITC/PI labeling. Using the IBM SPSS statistical program, a one-way ANOVA with Tukey’s post hoc test was employed for statistical analysis. Results: The ethanolic leaf extract of M. communis showed a strong growth inhibition effect (zone of inhibition: 20.3 ± 1.1–26.3 ± 2.5 mm, MIC: 4.88–312.5 µg/mL, and MBC: 39.07–1250 μg/mL) against several rapidly growing and slow-growing mycobacterial strains in a dose-dependent manner. Damage to the cell wall of bacterial cells was determined to be the cause of the antimycobacterial action. The extract inhibited biofilm formation (MBIC of 9.7 µg/mL) and eradicated already-formed mature and ultra-mature biofilms of M. smegmatis, with MBEC values of 78 µg/mL and 156 µg/mL, respectively. Additionally, the extract exhibited potent anticancer effects against diverse cancer cell lines of the breast (MCF-7), liver (HepG2), cervix (HeLa), and colon (HCT116) (IC50 for HCT116: 83 ± 2.5, HepG2: 53.3 ± 0.6, MCF-7: 41.5 ± 0.6, and HeLa: 33.3 ± 3.6) by apoptosis after arresting the cells in the G1 phase of the cell cycle. Conclusions: These results suggest that M. communis leaf extract is a potential source of secondary metabolites that could be further developed as potential anticancer and antimycobacterial agents to treat diverse types of cancers and mycobacterial infections.
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- 2024
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13. Aptamer Based on Silver Nanoparticle-Modified Flexible Carbon Ink Printed Electrode for the Electrochemical Detection of Chikungunya Virus
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Pradakshina Sharma, Mohd. Rahil Hasan, Ubaid Mushtaq Naikoo, Shaheen Khatoon, Roberto Pilloton, and Jagriti Narang
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flexible substrate ,electrochemical ,chikungunya virus ,aptasensor ,Biotechnology ,TP248.13-248.65 - Abstract
Medical devices have progressed from their initial bulky forms to smart devices. However, their rigidity hampers their seamless integration into everyday life. The fields of stretchable, textile, and flexible electronics are emerging research areas with the potential to drive significant technological progress. This research presents a laboratory-based technique to produce highly sensitive and flexible biosensors for detecting the chikungunya virus. These biosensors are based on 0D nanomaterials and demonstrate significant advancements in voltammetry. The electrochemical platform was created utilizing the stencil printing (StPE) technique. Adapting the biosensor setup involved the selection of aptamer as the biorecognition element bound with silver nanoparticles (AgNPs). This biosensor was employed in the voltammetric identification of the Chikungunya virus antigen (CHIKV-Ag) within a solution containing 0.5 mM potassium ferro/ferri cyanide, a redox pair. The biosensor was employed to evaluate CHIKV-Ag within a human serum sample. It demonstrated a linear detection span ranging from 0.1 ng/mL to 1 μg/mL, with a detection limit of 0.1 ng/mL for CHIKV-Ag. The proposed approach, due to its flexibility in production and the electrocatalytic attributes displayed by the zero-dimensional nanostructure, presents innovative opportunities for cost-effective and tailored aptamer-based bioelectronics, thereby broadening the scope of this domain.
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- 2024
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14. Novel Starch-Modified NiCrMn-LDH-Based Composite for Photocatalytic Degradation of Reactive Orange 13
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Muhammad Usman, Muhammad Babar Taj, Afaf Almasoudi, Doaa F. Baamer, Omar Makram Ali, Muhammad Imran Khan, Ismat Bibi, Mobeen Ur Rehman, Rabia Rasheed, Ahmad Raheel, Mushtaq Hussain Lashari, Abdallah Shanableh, and Javier Fernandez-Garcia
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orange 13 dye ,photocatalysis ,LDH ,starch ,hydrogen peroxide ,degradation kinetics ,Chemical technology ,TP1-1185 ,Chemistry ,QD1-999 - Abstract
Water pollution has become a great challenge today. To address this problem regarding wastewater treatment by removing toxic synthetic dyes from wastewater, this research focused on the synthesis of a novel starch-modified NiCrMn-layered double hydroxide composite through the coprecipitation method and applied it as a photocatalyst for the degradation of reactive orange 13 dye. The synthesized photocatalyst was characterized by X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FTIR), scanning electron microscopy (SEM), Brunauer–Emmett–Teller (BET), point of zero charges (PZC), dynamic light scattering (DLS), thermogravimetric analysis (TGA), differential scanning calorimetry (DSC) and Zeta potential techniques. These techniques revealed different characteristics of photocatalysts, like surface and structural properties. According to BET analysis, the final composite had 2.5 × 102 m2/g BET-specific surface area with a 45.56 nm pore radius value, and the overall composite found as mesoporous. Similarly, in DLS analysis, bare NiCrMn-LDH had 404 nm hydrodynamic size, which increased for the final starch composite up to 667 nm. Zeta potential value changed from −14.56 mV to 0.95 mV after the incorporation of starch with NiCrMn-LDH. They confirmed the incorporation of starch with trimetallic NiCrMn-layered double hydroxide (2:1:2). Starch association improved the properties of the photocatalyst like surface area. Different parameters like pH value, initial dye concentration, photocatalyst dose, hydrogen peroxide concentration, effect of sacrificial reagent, and effect of inorganic anions were studied for degradation of RO13. Overall, the photocatalysis process for RO13 followed pseudo-first-order kinetics. Photocatalytic degradation reactions for reactive orange 13 were conducted with an initial dye concentration of 10 mg/L, photocatalyst dosage of 20 mg/50 mL, and pH value at 3 in the presence of sunlight, resulting in an impressive degradation removal rate of 86.68%. This remarkable degradation ability of the photocatalyst for reactive orange 13 proves this composite was highly efficient.
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- 2024
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15. Efficient In Vitro Regeneration System and Comparative Transcriptome Analysis Offer Insight into the Early Development Characteristics of Explants from Cotyledon with Partial Petiole in Small-Fruited Pepper (Capsicum annuum)
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Xiaoqi Li, Naveed Mushtaq, Na Xing, Shuhua Wu, Jiancheng Liu, and Zhiwei Wang
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small-fruited pepper (Capsicum annuum) ,in vitro regeneration ,hormones ,histological observation ,transcriptome ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
In our research, we utilized six small-fruited pepper germplasms as materials, selected cotyledons with the petiole and hypocotyls as explants, and conducted in vitro regeneration studies. Our outcomes specify that the most suitable explant is cotyledon with the petiole, and the suitable genotype is HNUCA341. The optimal medium for inducing and elongating adventitious buds for this genotype is Murashige and Skoog medium (MS) + 9.12 μM Zeatin (ZT) + 0.57 μM 3-Indoleacetic acid (IAA), with a bud induction rate of 44.4%. The best rooting induction medium is MS + 1.14 μM IAA, with a rooting rate of 86.7%. Research on the addition of exogenous hormones has revealed that the induction speed of buds in small-fruited pepper (HNUCA341) in the combination of ZT and IAA hormones (abbreviated as ZI) is quicker, and the induction effect is better. The histological observations indicate that ZI treatment accelerates the initiation of explant division and differentiation, causing a shorter duration of vascular-bundle tissue production. The plant hormone signaling pathway was significantly enriched by Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, including ARR9 (LOC107843874, LOC107843885), ARR4 (LOC107848380, LOC107862455), AHK4 (LOC107870540), AHP1 (LOC107839518), LAX2 (LOC107846008), SAUR36 (LOC107852624), IAA8 (LOC107841020), IAA16 (LOC107839415), PYL4 (LOC107843441), and PYL6 (LOC107871127); these significantly enriched genes may be associated with in vitro regeneration. In addition, the carbon metabolism pathway and plant mitogen-activated protein kinase (MAPK) signaling pathway are also significantly enriched in KEGG. The results of the Gene Ontology (GO) analysis revealed that differentially expressed genes related to carbon metabolism and fixation, photosynthesis and MAPK signaling pathways were upregulated under ZI treatment. It was found that they might be associated with enhanced regeneration in vitro. Furthermore, we also screened out differentially expressed transcription factors, primarily from the MYB, bHLH, AP2/ERF, and NAC families. Overall, our work accumulated important data for the in-depth analysis of the molecular mechanism of in vitro regeneration of pepper, and provides valuable germplasm for establishing an efficient stable pepper genetic-transformation system based on tissue culture.
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- 2024
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16. Beyond Stress Ischemia: Unveiling the Multifaceted Nature of Coronary Vulnerable Plaques Using Cardiac Computed Tomography
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Gianluigi Napoli, Saima Mushtaq, Paolo Basile, Maria Cristina Carella, Daniele De Feo, Michele Davide Latorre, Andrea Baggiano, Marco Matteo Ciccone, Gianluca Pontone, and Andrea Igoren Guaricci
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CCTA ,coronary plaque ,coronary artery calcium ,Medicine - Abstract
Historically, cardiovascular prevention has been predominantly focused on stress-induced ischemia, but recent trials have challenged this paradigm, highlighting the emerging role of vulnerable, non-flow-limiting coronary plaques, leading to a shift towards integrating plaque morphology with functional data into risk prediction models. Coronary computed tomography angiography (CCTA) represents a high-resolution, low-risk, and largely available non-invasive modality for the precise delineation of plaque composition, morphology, and inflammatory activity, further enhancing our ability to stratify high-risk plaque and predict adverse cardiovascular outcomes. Coronary artery calcium (CAC) scoring, derived from CCTA, has emerged as a promising tool for predicting future cardiovascular events in asymptomatic individuals, demonstrating incremental prognostic value beyond traditional cardiovascular risk factors in terms of myocardial infarction, stroke, and all-cause mortality. Additionally, CCTA-derived information on adverse plaque characteristics, geometric characteristics, and hemodynamic forces provides valuable insights into plaque vulnerability and seems promising in guiding revascularization strategies. Additionally, non-invasive assessments of epicardial and pericoronary adipose tissue (PCAT) further refine risk stratification, adding prognostic significance to coronary artery disease (CAD), correlating with plaque development, vulnerability, and rupture. Moreover, CT imaging not only aids in risk stratification but is now emerging as a screening tool able to monitor CAD progression and treatment efficacy over time. Thus, the integration of CAC scoring and PCAT evaluation into risk stratification algorithms, as well as the identification of high-risk plaque morphology and adverse geometric and hemodynamic characteristics, holds promising results for guiding personalized preventive interventions, helping physicians in identifying high-risk individuals earlier, tailoring lifestyle and pharmacological interventions, and improving clinical outcomes in their patients.
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- 2024
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17. Genomic Study of High-Risk Clones of Enterobacter hormaechei Collected from Tertiary Hospitals in the United Arab Emirates
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Akela Ghazawi, Febin Anes, Shaimaa Mouftah, Mohammed Elbediwi, Awase Baig, Muna Alketbi, Fatema Almazrouei, Mariam Alhashmi, Norah Alzarooni, Ashrat Manzoor, Ihab Habib, Nikolaos Strepis, Anju Nabi, and Mushtaq Khan
- Subjects
Enterobacter hormachei ,MDR ,whole-genome sequencing ,plasmids ,incompatibility types ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Enterobacter hormaechei has emerged as a significant pathogen within healthcare settings due to its ability to develop multidrug resistance (MDR) and survive in hospital environments. This study presents a genome-based analysis of carbapenem-resistant Enterobacter hormaechei isolates from two major hospitals in the United Arab Emirates. Eight isolates were subjected to whole-genome sequencing (WGS), revealing extensive resistance profiles including the blaNDM-1, blaOXA-48, and blaVIM-4 genes. Notably, one isolate belonging to ST171 harbored dual carbapenemase genes, while five isolates exhibited colistin resistance without mcr genes. The presence of the type VI secretion system (T6SS), various adhesins, and virulence genes contributes to the virulence and competitive advantage of the pathogen. Additionally, our isolates (87.5%) possessed ampC β-lactamase genes, predominantly blaACT genes. The genomic context of blaNDM-1, surrounded by other resistance genes and mobile genetic elements, highlights the role of horizontal gene transfer (HGT) in the spread of resistance. Our findings highlight the need for rigorous surveillance, strategic antibiotic stewardship, and hospital-based WGS to manage and mitigate the spread of these highly resistant and virulent pathogens. Accurate identification and monitoring of Enterobacter cloacae complex (ECC) species and their resistance mechanisms are crucial for effective infection control and treatment strategies.
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- 2024
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18. O2SAT: Object-Oriented-Segmentation-Guided Spatial-Attention Network for 3D Object Detection in Autonomous Vehicles
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Husnain Mushtaq, Xiaoheng Deng, Irshad Ullah, Mubashir Ali, and Babur Hayat Malik
- Subjects
autonomous vehicles ,3D object detection ,object-oriented road segmentation ,attention-based feature reweighting ,deep learning ,Information technology ,T58.5-58.64 - Abstract
Autonomous vehicles (AVs) strive to adapt to the specific characteristics of sustainable urban environments. Accurate 3D object detection with LiDAR is paramount for autonomous driving. However, existing research predominantly relies on the 3D object-based assumption, which overlooks the complexity of real-world road environments. Consequently, current methods experience performance degradation when targeting only local features and overlooking the intersection of objects and road features, especially in uneven road conditions. This study proposes a 3D Object-Oriented-Segmentation Spatial-Attention (O2SAT) approach to distinguish object points from road points and enhance the keypoint feature learning by a channel-wise spatial attention mechanism. O2SAT consists of three modules: Object-Oriented Segmentation (OOS), Spatial-Attention Feature Reweighting (SFR), and Road-Aware 3D Detection Head (R3D). OOS distinguishes object and road points and performs object-aware downsampling to augment data by learning to identify the hidden connection between landscape and object; SFR performs weight augmentation to learn crucial neighboring relationships and dynamically adjust feature weights through spatial attention mechanisms, which enhances the long-range interactions and contextual feature discrimination for noise suppression, improving overall detection performance; and R3D utilizes refined object segmentation and optimized feature representations. Our system forecasts prediction confidence into existing point-backbones. Our method’s effectiveness and robustness across diverse datasets (KITTI) has been demonstrated through vast experiments. The proposed modules seamlessly integrate into existing point-based frameworks, following a plug-and-play approach.
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- 2024
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19. Advancements in Immunotherapeutic Treatments for Hepatocellular Carcinoma: Potential of Combination Therapies
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Yusra Zarlashat, Hassan Mushtaq, Linh Pham, Wasim Abbas, and Keisaku Sato
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hepatocellular carcinoma ,immunotherapy ,tumor microenvironment ,immune checkpoint inhibitors ,combination therapy ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Hepatocellular carcinoma (HCC) is the sixth most prevalent cancer and a significant global health burden, with increasing incidence rates and limited treatment options. Immunotherapy has become a promising approach due to its ability to affect the immune microenvironment and promote antitumor responses. The immune microenvironment performs an essential role in both the progression and the development of HCC, with different characteristics based on specific immune cells and etiological factors. Immune checkpoint inhibitors, including programmed death-1/programmed death-ligand 1 inhibitors (pembrolizumab, nivolumab, and durvalumab) and cytotoxic T lymphocyte antigen-4 inhibitors (tremelimumab and ipilimumab), have the potential to treat advanced HCC and overcome adverse effects, such as liver failure and chemoresistance. Phase II and phase III clinical trials highlight the efficacy of pembrolizumab and nivolumab, respectively, in advanced HCC patients, as demonstrated by their positive effects on overall survival and progression-free survival. Tremelimumab has exhibited modest response rates, though it does possess antiviral activity. Thus, it is still being investigated in ongoing clinical trials. Combination therapies with multiple drugs have demonstrated potential benefits in terms of survival and tumor response rates, improving patient outcomes compared to monotherapy, especially for advanced-stage HCC. This review addresses the clinical trials of immunotherapies for early-, intermediate-, and advanced-stage HCC. Additionally, it highlights how combination therapy can significantly enhance overall survival, progression-free survival, and objective response rate in advanced-stage HCC, where treatment options are limited.
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- 2024
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20. Boosting Drought Tolerance in Tomatoes through Stimulatory Action of Salicylic Acid Imparted Antioxidant Defense Mechanisms
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Gyanendra Kumar Rai, Isha Magotra, Danish Mushtaq Khanday, Sadiya M. Choudhary, Anil Bhatt, Vinod Gupta, Pradeep Kumar Rai, and Pradeep Kumar
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abiotic stress ,phytohormone ,biostimulants ,drought tolerance ,gene expression ,Agriculture - Abstract
Drought poses a significant threat to agricultural productivity, particularly affecting economic crops like tomatoes. To address this challenge, various alternatives have been explored, including the use of elicitors or biostimulants such as salicylic acid (SA). This study aims to assess the stimulatory action of SA in alleviating drought stress in tomato plants under greenhouse conditions. The experiment was designed with two main factors: water availability (controlled versus drought) and the foliar application of SA at four different concentrations ranging from 100 to 250 mg L−1. The application of SA, particularly at a concentration of 250 mg L−1, showed promising results in mitigating the adverse effects of drought stress followed by 200 mg L−1. This was evidenced by the increased activity of antioxidant enzymes such as superoxide dismutase (SOD), ascorbate peroxidase (APX), and catalase (CAT). Gene expression analysis revealed optimal APX expression with SA application at concentrations of 200 mg L−1 or 250 mg L−1. Additionally, the application of SA at 250 mg L−1 led to a high accumulation of bioactive compounds without compromising yield. Furthermore, SA application positively influenced both shoot and root weights, with the highest values observed at a concentration of 250 mg L−1. While SA is known to enhance plant tolerance to abiotic stress, further research is needed to fully elucidate its biochemical, physiological, and molecular mechanisms in supporting plant tolerance to drought stress. Utilizing salicylic acid can help growers mitigate environmental stresses, enhancing tomato crop yield and quality. Integrating SA treatments into agriculture offers a sustainable alternative elicitor for ensuring food security under challenging climate conditions.
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- 2024
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21. Employing Metal-Enriched Polymeric Composites: An Innovative Approach for Combatting Microbes and Bacteria in Building Components in Public Places
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Aaruci Agarwalla, Waleed Ahmed, Ali H. Al-Marzouqi, Tahir A. Rizvi, Essam Zaneldin, and Mushtaq Khan
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building components ,antimicrobial efficiency ,poly-lactic acid (PLA) ,injection molding ,Building construction ,TH1-9745 - Abstract
The escalating occurrence of hospital-associated infections globally, compounded by the ongoing pandemic, has spurred researchers to delve into innovative approaches for combating pathogens and overcoming their resistance to commonly used materials. One of the most important concerns is frequently touched building components in public places and hospitals, which serve as potential sources of infection transmission, prompting a pressing need for effective antimicrobial solutions. This research developed antimicrobial polymeric composites comprising Copper (Cu), Aluminum (Al), and Stainless Steel (SS) particles incorporated into Polylactic Acid (PLA) via injection molding as a commercial method for the production of building components, to investigate the antimicrobial properties. The study aims at increasing the antimicrobial efficiency of polymeric composites with different metallic particles and tests the prepared polymeric composites (two sets of Cu-enriched composites, i.e., Cu–PLA–SS, by mixing Al–PLA with Cu–PLA, and Cu–PLA–Al, by mixing SS–PLA with Cu–PLA) against various bacteria. The results demonstrate that the samples prepared with Cu-PLA mixed with SS and Al exhibited the best antibacterial activity (98.6%) after 20 min of exposure to all bacteria, notably against Staphylococcus aureus and Enterococci. In addition, the hybrid composites Cu–PLA–SS and Cu–PLA–Al, prepared using injection molding, showed similar antimicrobial activity against all bacteria compared to those prepared using 3D printing. Therefore, polymeric composites enriched with metallic particles such as Cu, Al, and SS prepared via injection molding show potential in biomedical applications, food packaging, tissue engineering, and various technological industries, offering viable solutions for environments where risks from contact with infected surfaces are a concern.
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- 2024
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22. The Role of Multimodality Imaging (CT & MR) as a Guide to the Management of Chronic Coronary Syndromes
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Luigi Tassetti, Enrico Sfriso, Francesco Torlone, Andrea Baggiano, Saima Mushtaq, Francesco Cannata, Alberico Del Torto, Fabio Fazzari, Laura Fusini, Daniele Junod, Riccardo Maragna, Alessandra Volpe, Nazario Carrabba, Edoardo Conte, Marco Guglielmo, Lucia La Mura, Valeria Pergola, Roberto Pedrinelli, Ciro Indolfi, Gianfranco Sinagra, Pasquale Perrone Filardi, Andrea Igoren Guaricci, and Gianluca Pontone
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chronic coronary syndrome ,stress cardiac magnetic resonance ,coronary computed tomography angiography ,Medicine - Abstract
Chronic coronary syndrome (CCS) is one of the leading cardiovascular causes of morbidity, mortality, and use of medical resources. After the introduction by international guidelines of the same level of recommendation to non-invasive imaging techniques in CCS evaluation, a large debate arose about the dilemma of choosing anatomical (with coronary computed tomography angiography (CCTA)) or functional imaging (with stress echocardiography (SE), cardiovascular magnetic resonance (CMR), or nuclear imaging techniques) as a first diagnostic evaluation. The determinant role of the atherosclerotic burden in defining cardiovascular risk and prognosis more than myocardial inducible ischemia has progressively increased the use of a first anatomical evaluation with CCTA in a wide range of pre-test probability in CCS patients. Functional testing holds importance, both because the role of revascularization in symptomatic patients with proven ischemia is well defined and because functional imaging, particularly with stress cardiac magnetic resonance (s-CMR), gives further prognostic information regarding LV function, detection of myocardial viability, and tissue characterization. Emerging techniques such as stress computed tomography perfusion (s-CTP) and fractional flow reserve derived from CT (FFRCT), combining anatomical and functional evaluation, appear capable of addressing the need for a single non-invasive examination, especially in patients with high risk or previous revascularization. Furthermore, CCTA in peri-procedural planning is promising to acquire greater importance in the non-invasive planning and guiding of complex coronary revascularization procedures, both by defining the correct strategy of interventional procedure and by improving patient selection. This review explores the different roles of non-invasive imaging techniques in managing CCS patients, also providing insights into preoperative planning for percutaneous or surgical myocardial revascularization.
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- 2024
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23. Augmenting Aquaculture Efficiency through Involutional Neural Networks and Self-Attention for Oplegnathus Punctatus Feeding Intensity Classification from Log Mel Spectrograms
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Usama Iqbal, Daoliang Li, Zhuangzhuang Du, Muhammad Akhter, Zohaib Mushtaq, Muhammad Farrukh Qureshi, and Hafiz Abbad Ur Rehman
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fish feeding behavior ,spectrogram-based feature fusion ,Discrete Wavelet Transform ,Gabor filter ,Local Binary Pattern ,Laplacian High Pass Filter ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
Understanding the feeding dynamics of aquatic animals is crucial for aquaculture optimization and ecosystem management. This paper proposes a novel framework for analyzing fish feeding behavior based on a fusion of spectrogram-extracted features and deep learning architecture. Raw audio waveforms are first transformed into Log Mel Spectrograms, and a fusion of features such as the Discrete Wavelet Transform, the Gabor filter, the Local Binary Pattern, and the Laplacian High Pass Filter, followed by a well-adapted deep model, is proposed to capture crucial spectral and spectral information that can help distinguish between the various forms of fish feeding behavior. The Involutional Neural Network (INN)-based deep learning model is used for classification, achieving an accuracy of up to 97% across various temporal segments. The proposed methodology is shown to be effective in accurately classifying the feeding intensities of Oplegnathus punctatus, enabling insights pertinent to aquaculture enhancement and ecosystem management. Future work may include additional feature extraction modalities and multi-modal data integration to further our understanding and contribute towards the sustainable management of marine resources.
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- 2024
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24. Amylase and Cellulase Production from Newly Isolated Bacillus subtilis Using Acid Treated Potato Peel Waste
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Qudsia Mushtaq, Uzair Ishtiaq, Nicolas Joly, Javed Iqbal Qazi, and Patrick Martin
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cellulase ,amylase ,Box–Behnken design ,proximate analysis ,potato peel waste (PPW) ,acidic treatment ,Biology (General) ,QH301-705.5 - Abstract
Species belonging to the genus Bacillus produce many advantageous extracellular enzymes that have tremendous applications on a commercial scale for the textile, detergent, feed, food, and beverage industries. This study aimed to isolate potent thermo-tolerant amylolytic and cellulolytic bacterium from the local environment. Using the Box–Behnken design of response surface methodology, we further optimized the amylase and cellulase activity. The isolate was identified by 16S rRNA gene sequencing as Bacillus subtilis QY4. This study utilized potato peel waste (PPW) as the biomaterial, which is excessively being dumped in an open environment. Nutritional status of the dried PPW was determined by proximate analysis. All experimental runs were carried out in 250 mL Erlenmeyer flasks containing acid treated PPW as a substrate by the thermos-tolerant Bacillus subtilis QY4 incubated at 37 °C for 72 h of submerged fermentation. Results revealed that the dilute H2SO4 assisted autoclaved treatment favored more amylase production (0.601 IU/mL/min) compared to the acid treatment whereas high cellulase production (1.269 IU/mL/min) was observed in the dilute acid treatment and was found to be very effective compared to the acid assisted autoclaved treatment. The p-value, F-value, and coefficient of determination proved the significance of the model. These results suggest that PPW could be sustainably used to produce enzymes, which offer tremendous applications in various industrial arrays, particularly in biofuel production.
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- 2024
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25. Land Characterization System Software: Implementing Land Cover Ontology
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Nicola Mosca, Fatima Mushtaq, Victor Munene, Peter Maleh, Ndyebo Mnyanda, Rashed Jalal, and Amit Ghosh
- Subjects
earth observation ,standard ,interoperability ,innovation ,ontologies ,ISO 19144-2 ,Agriculture - Abstract
Land cover (LC) plays a crucial role in the monitoring and planning of the environment among various domains, such as climate change, the management of natural resources, and sustainable development. However, inconsistent LC legends hamper their usability, particularly as technologies, like remote sensing, rapidly improve data quality and quantity for extracting valuable information. Ontologies play a pivotal role in improving the standardization and harmonization of different LC taxonomies, enabling both a reduction in inconsistencies and a way to harness ever-increasing computing power to help scientists provide faster and better answers. However, using ontologies without suitable tools, especially when expressive power is matched with complexity, can prove a daunting task. This paper introduces the land characterization system (LCHS), an innovative tool built to support the ontology discussed in the ISO 19144-2 standard, known as Land Cover Meta Language (LCML). The LCHS can help streamline and speed up the creation and editing of LC legends using a data-driven design approach.
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- 2024
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26. Enhancing Water Purification by Integrating Titanium Dioxide Nanotubes into Polyethersulfone Membranes for Improved Hydrophilicity and Anti-Fouling Performance
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Ayesha Bilal, Muhammad Yasin, Faheem Hassan Akhtar, Mazhar Amjad Gilani, Hamad Alhmohamadi, Mohammad Younas, Azeem Mushtaq, Muhammad Aslam, Mehdi Hassan, Rab Nawaz, Aqsha Aqsha, Jaka Sunarso, Muhammad Roil Bilad, and Asim Laeeq Khan
- Subjects
mixed matrix membranes ,TiO2 nanotubes ,water purification ,Chemical technology ,TP1-1185 ,Chemical engineering ,TP155-156 - Abstract
Water pollution remains a critical concern, one necessitated by rapidly increasing industrialization and urbanization. Among the various strategies for water purification, membrane technology stands out, with polyethersulfone (PES) often being the material of choice due to its robust mechanical properties, thermal stability, and chemical resistance. However, PES-based membranes tend to exhibit low hydrophilicity, leading to reduced flux and poor anti-fouling performance. This study addresses these limitations by incorporating titanium dioxide nanotubes (TiO2NTs) into PES nanofiltration membranes to enhance their hydrophilic properties. The TiO2NTs, characterized through FTIR, XRD, BET, and SEM, were embedded in PES at varying concentrations using a non-solvent induced phase inversion (NIPS) method. The fabricated mixed matrix membranes (MMMs) were subjected to testing for water permeability and solute rejection capabilities. Remarkably, membranes with a 1 wt% TiO2NT loading displayed a significant increase in pure water flux, from 36 to 72 L m2 h−1 bar−1, a 300-fold increase in selectivity compared to the pristine sample, and a dye rejection of 99%. Furthermore, long-term stability tests showed only a slight reduction in permeate flux over a time of 36 h, while dye removal efficiency was maintained, thus confirming the membrane’s stability. Anti-fouling tests revealed a 93% flux recovery ratio, indicating excellent resistance to fouling. These results suggest that the inclusion of TiO2 NTs offers a promising avenue for the development of efficient and stable anti-fouling PES-based membranes for water purification.
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- 2024
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27. Biochemical and Computational Assessment of Acute Phase Proteins in Dairy Cows Affected with Subclinical Mastitis
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Aarif Ali, Muneeb U. Rehman, Saima Mushtaq, Sheikh Bilal Ahmad, Altaf Khan, Anik Karan, Amir Bashir Wani, Showkat Ahmad Ganie, and Manzoor Ur Rahman Mir
- Subjects
subclinical mastitis ,somatic cell count ,acute phase proteins ,principal component analysis ,computational approaches ,Biology (General) ,QH301-705.5 - Abstract
Subclinical mastitis (SCM) is a predominant form of mastitis wherein major visible signs of disease are absent. The present study aimed to determine acute phase proteins (APPs) like ferritin, C-reactive protein (CRP), and microalbumin (Malb) in 135 composite milk and serum samples of healthy (n = 25) and SCM (n = 110) cows. As bovine mastitis is an inflammatory disease, the present study also aimed at finding novel anti-inflammatory compounds from natural sources by repurposing approach using computational studies. The findings of the present study revealed substantial elevation (p < 0.001) in milk SCC and an increase in ferritin, CRP, and Malb (p < 0.001) in milk and sera of the SCM group as compared to healthy animals. Receiver operating characteristics of milk SCC, milk, and serum APPs unraveled statistically substantial alteration (p < 0.001). Further, SCC was correlated with milk APPs ferritin (r = 0.26 **, p < 0.002), CRP (r = 0.19 *, p < 0.02), and Malb (r = 0.21 *, p < 0.01). Additionally, milk SCC was correlated with serum ferritin (r = 0.28 **, p < 0.001), CRP (r = 0.16, p > 0.05), and Malb (r = 0.16, p > 0.05). The findings of molecular docking revealed that Chaetoglobosin U was the most effective molecule that showed the highest binding affinity (kcal/mol) of −10.1 and −8.5 against ferritin and albumin. The present study concluded that the estimation of cow-side tests, SCC, and APPs in milk/serum is suitable to detect SCM and screening herd community. Furthermore, Chaetoglobosin U could be developed as a promising anti-inflammatory inhibitor; however, further studies are required to validate these findings.
- Published
- 2023
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28. The Role of Magnetic Resonance Imaging in Cardiomyopathies in the Light of New Guidelines: A Focus on Tissue Mapping
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Cinzia Forleo, Maria Cristina Carella, Paolo Basile, Donato Mandunzio, Giulia Greco, Gianluigi Napoli, Eugenio Carulli, Marco Maria Dicorato, Ilaria Dentamaro, Vincenzo Ezio Santobuono, Riccardo Memeo, Michele Davide Latorre, Andrea Baggiano, Saima Mushtaq, Marco Matteo Ciccone, Gianluca Pontone, and Andrea Igoren Guaricci
- Subjects
cardiomyopathies ,tissue mapping ,cardiac magnetic resonance ,advanced diagnostic techniques ,non-dilated left ventricular cardiomyopathy ,cardiogenetic ,Medicine - Abstract
Cardiomyopathies (CMPs) are a group of myocardial disorders that are characterized by structural and functional abnormalities of the heart muscle. These abnormalities occur in the absence of coronary artery disease (CAD), hypertension, valvular disease, and congenital heart disease. CMPs are an increasingly important topic in the field of cardiovascular diseases due to the complexity of their diagnosis and management. In 2023, the ESC guidelines on cardiomyopathies were first published, marking significant progress in the field. The growth of techniques such as cardiac magnetic resonance imaging (CMR) and genetics has been fueled by the development of multimodal imaging approaches. For the diagnosis of CMPs, a multimodal imaging approach, including CMR, is recommended. CMR has become the standard for non-invasive analysis of cardiac morphology and myocardial function. This document provides an overview of the role of CMR in CMPs, with a focus on tissue mapping. CMR enables the characterization of myocardial tissues and the assessment of cardiac functions. CMR sequences and techniques, such as late gadolinium enhancement (LGE) and parametric mapping, provide detailed information on tissue composition, fibrosis, edema, and myocardial perfusion. These techniques offer valuable insights for early diagnosis, prognostic evaluation, and therapeutic guidance of CMPs. The use of quantitative CMR markers enables personalized treatment plans, improving overall patient outcomes. This review aims to serve as a guide for the use of these new tools in clinical practice.
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- 2024
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29. Low-Complexity 2D-DOD and 2D-DOA Estimation in Bistatic MIMO Radar Systems: A Reduced-Dimension MUSIC Algorithm Approach
- Author
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Mushtaq Ahmad, Xiaofei Zhang, Xin Lai, Farman Ali, and Xinlei Shi
- Subjects
Bistatic MIMO radar ,RD-MUSIC ,UPA ,2D-DOD and 2D-DOA estimation ,low-complexity algorithm ,Chemical technology ,TP1-1185 - Abstract
This paper presents a new technique for estimating the two-dimensional direction of departure (2D-DOD) and direction of arrival (2D-DOA) in bistatic uniform planar array Multiple-Input Multiple-Output (MIMO) radar systems. The method is based on the reduced-dimension (RD) MUSIC algorithm, aiming to achieve improved precision and computational efficiency. Primarily, this pioneering approach efficiently transforms the four-dimensional (4D) estimation problem into two-dimensional (2D) searches, thus reducing the computational complexity typically associated with conventional MUSIC algorithms. Then, exploits the spatial diversity of array response vectors to construct a 4D spatial spectrum function, which is crucial in resolving the complex angular parameters of multiple simultaneous targets. Finally, the objective is to simplify the spatial spectrum to a 2D search within a 4D measurement space to achieve an optimal balance between efficiency and accuracy. Simulation results validate the effectiveness of our proposed algorithm compared to several existing approaches, demonstrating its robustness in accurately estimating 2D-DOD and 2D-DOA across various scenarios. The proposed technique shows significant computational savings and high-resolution estimations and maintains high precision, setting a new benchmark for future explorations in the field.
- Published
- 2024
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30. Herbal Spices as Food and Medicine: Microscopic Authentication of Commercial Herbal Spices
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Amjad Khan, Mushtaq Ahmad, Amir Sultan, Raees Khan, Jamil Raza, Sheikh Zain Ul Abidin, Siraj Khan, Muhammad Zafar, Mohammad N. Uddin, and Mohsin Kazi
- Subjects
consumer safety ,herbal product ,herbal spices ,nutraceutical ,plant-based medicine ,traditional knowledge ,Botany ,QK1-989 - Abstract
Herbal spices are an agricultural commodity, economically very important and beneficial in primary healthcare in the food and medicine sectors. Herbal spices are used as food flavoring agents as well as in phytotherapies throughout the world and have nutritive benefits. The food and medicine industries widely employ artificial or natural adulteration to retard the deterioration and utilization of these adulterants in food and medicine products has given rise to significant apprehension among consumers, primarily stemming from the potential health risks that they pose. Thus, their characterization for the purpose of identification, origin, and quality assurance is mandatory for safe human consumption. Here, we studied 22 samples of commonly traded herbal spices that belong to 20 different genera and 21 species comprising 14 families, investigated macroscopically or organoleptically as well as histologically under microscopic examination. In this study, we provide details on organoleptic features including appearance, taste, odor, color, shape, size, fractures, types of trichomes, and the presence of lenticels among the examined herbal spices and these features have great significance in the detection of both natural as well as artificial deterioration. In terms of microscopic characterization, each examined plant part comprising different anatomical characteristics has taxonomic importance and also provides useful information for authentication from natural adulterants. Furthermore, the studied taxa were also described with nutritive and therapeutic properties. For condiments, herbal beverages and medicinal purposes, different herbal parts such as leaves, floral buds, seeds, fruit, and accessory parts like mericarp, rhizome, bulbs, and bark were used and commercially traded. Similarly, in this study, the leaves of Cinnamomum tamala and Mentha spicata, the floral buds of Syzygium aromaticum, the seeds of Amomum subulatum, Brassica nigra, Punica granatum, Myristica fragrans, Phyllanthus emblica, and Elettaria cardamomum, the mericarp of Coriandrum sativum, and Cuminum cyminum were observed. As a result, we show the potential of herbal spices as a source of many valuable phytochemicals and essential nutrients for food, nutraceutical, and homoeopathic medicine.
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- 2024
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31. Advancements in Soft Robotics: A Comprehensive Review on Actuation Methods, Materials, and Applications
- Author
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Yanmei Wang, Yanen Wang, Ray Tahir Mushtaq, and Qinghua Wei
- Subjects
material ,actuating methods ,application ,Organic chemistry ,QD241-441 - Abstract
The flexibility and adaptability of soft robots enable them to perform various tasks in changing environments, such as flower picking, fruit harvesting, in vivo targeted treatment, and information feedback. However, these fulfilled functions are discrepant, based on the varied working environments, driving methods, and materials. To further understand the working principle and research emphasis of soft robots, this paper summarized the current research status of soft robots from the aspects of actuating methods (e.g., humidity, temperature, PH, electricity, pressure, magnetic field, light, biological, and hybrid drive), materials (like hydrogels, shape-memory materials, and other flexible materials) and application areas (camouflage, medical devices, electrical equipment, and grippers, etc.). Finally, we provided some opinions on the technical difficulties and challenges of soft robots to comprehensively comprehend soft robots, lucubrate their applications, and improve the quality of our lives.
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- 2024
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32. Multi-Objective Task-Aware Offloading and Scheduling Framework for Internet of Things Logistics
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Asif Umer, Mushtaq Ali, Ali Imran Jehangiri, Muhammad Bilal, and Junaid Shuja
- Subjects
analytical hierarchy process (AHP) ,computation-intensive tasks ,delay-sensitive tasks ,energy consumption ,IoT task offloading & scheduling ,smart transportation of logistics ,Chemical technology ,TP1-1185 - Abstract
IoT-based smart transportation monitors vehicles, cargo, and driver statuses for safe movement. Due to the limited computational capabilities of the sensors, the IoT devices require powerful remote servers to execute their tasks, and this phenomenon is called task offloading. Researchers have developed efficient task offloading and scheduling mechanisms for IoT devices to reduce energy consumption and response time. However, most research has not considered fault-tolerance-based job allocation for IoT logistics trucks, task and data-aware scheduling, priority-based task offloading, or multiple-parameter-based fog node selection. To overcome the limitations, we proposed a Multi-Objective Task-Aware Offloading and Scheduling Framework for IoT Logistics (MT-OSF). The proposed model prioritizes the tasks into delay-sensitive and computation-intensive tasks using a priority-based offloader and forwards the two lists to the Task-Aware Scheduler (TAS) for further processing on fog and cloud nodes. The Task-Aware Scheduler (TAS) uses a multi-criterion decision-making process, i.e., the analytical hierarchy process (AHP), to calculate the fog nodes’ priority for task allocation and scheduling. The AHP decides the fog nodes’ priority based on node energy, bandwidth, RAM, and MIPS power. Similarly, the TAS also calculates the shortest distance between the IoT-enabled vehicle and the fog node to which the IoT tasks are assigned for execution. A task-aware scheduler schedules delay-sensitive tasks on nearby fog nodes while allocating computation-intensive tasks to cloud data centers using the FCFS algorithm. Fault-tolerant manager is used to check task failure; if any task fails, the proposed system re-executes the tasks, and if any fog node fails, the proposed system allocates the tasks to another fog node to reduce the task failure ratio. The proposed model is simulated in iFogSim2 and demonstrates a 7% reduction in response time, 16% reduction in energy consumption, and 22% reduction in task failure ratio in comparison to Ant Colony Optimization and Round Robin.
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- 2024
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33. Cell Culture Adaptive Amino Acid Substitutions in FMDV Structural Proteins: A Key Mechanism for Altered Receptor Tropism
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Hassan Mushtaq, Syed Salman Shah, Yusra Zarlashat, Mazhar Iqbal, and Wasim Abbas
- Subjects
foot-and-mouth disease virus ,virus capsid ,integrins ,heparan sulfate ,structural proteins ,BHK-21 ,Microbiology ,QR1-502 - Abstract
The foot-and-mouth disease virus is a highly contagious and economically devastating virus of cloven-hooved animals, including cattle, buffalo, sheep, and goats, causing reduced animal productivity and posing international trade restrictions. For decades, chemically inactivated vaccines have been serving as the most effective strategy for the management of foot-and-mouth disease. Inactivated vaccines are commercially produced in cell culture systems, which require successful propagation and adaptation of field isolates, demanding a high cost and laborious time. Cell culture adaptation is chiefly indebted to amino acid substitutions in surface-exposed capsid proteins, altering the necessity of RGD-dependent receptors to heparan sulfate macromolecules for virus binding. Several amino acid substations in VP1, VP2, and VP3 capsid proteins of FMDV, both at structural and functional levels, have been characterized previously. This literature review combines frequently reported amino acid substitutions in virus capsid proteins, their critical roles in virus adaptation, and functional characterization of the substitutions. Furthermore, this data can facilitate molecular virologists to develop new vaccine strains against the foot-and-mouth disease virus, revolutionizing vaccinology via reverse genetic engineering and synthetic biology.
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- 2024
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34. Renal AL Amyloidosis: Updates on Diagnosis, Staging, and Management
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Areez Shafqat, Hassan Elmaleh, Ali Mushtaq, Zaina Firdous, Omer Ashruf, Debduti Mukhopadhyay, Maheen Ahmad, Mahnoor Ahmad, Shahzad Raza, and Faiz Anwer
- Subjects
AL amyloidosis ,daratumumab ,venetoclax ,immunotherapy ,anti-amyloid antibodies ,Medicine - Abstract
AL amyloidosis is caused by the excessive production of nonfunctional immunoglobulins, leading to the formation of amyloid fibrils that damage vital organs, especially the heart and kidneys. AL amyloidosis presents with non-specific symptoms such as fatigue, weight loss, numbness, pain, and nephrotic syndrome. Consequently, diagnosis is often delayed, and patients typically present with advanced disease at diagnosis. The Pavia renal staging model stratifies patients based on their likelihood of progressing to dialysis. Treatment with daratumumab plus cyclophosphamide, bortezomib, and dexamethasone (i.e., Dara-CyBorD) was effective in inducing renal response in the landmark phase III ANDROMEDA trial and reducing early mortality. However, determining the most appropriate treatment regimen for relapsed or refractory cases remains a challenge due to various patient- and disease-related factors. Encouragingly, t(11:14) may be a positive indicator of therapy responses to the anti-BCL2 therapy venetoclax. Moreover, it is increasingly possible—for the first time—to clear AL amyloid fibrils from peripheral organs by leveraging novel anti-fibril immunotherapeutic approaches, although these medications are still under investigation in clinical trials. Given these advancements, this review provides a comprehensive overview of the current strategies for diagnosing, staging, treating, and monitoring AL amyloidosis, emphasizing renal involvement.
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- 2024
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35. First Report of Colistin-Resistant Escherichia coli Carrying mcr-1 IncI2(delta) and IncX4 Plasmids from Camels (Camelus dromedarius) in the Gulf Region
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Akela Ghazawi, Nikolaos Strepis, Febin Anes, Dana Yaaqeib, Amal Ahmed, Aysha AlHosani, Mirah AlShehhi, Ashrat Manzoor, Ihab Habib, Nisar A. Wani, John P. Hays, and Mushtaq Khan
- Subjects
mcr-1 gene ,plasmids ,Escherichia coli ,camels ,United Arab Emirates (UAE) ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Addressing the emergence of antimicrobial resistance (AMR) poses a significant challenge in veterinary and public health. In this study, we focused on determining the presence, phenotypic background, and genetic epidemiology of plasmid-mediated colistin resistance (mcr) in Escherichia coli bacteria isolated from camels farmed in the United Arab Emirates (UAE). Fecal samples were collected from 50 camels at a Dubai-based farm in the UAE and colistin-resistant Gram-negative bacilli were isolated using selective culture. Subsequently, a multiplex PCR targeting a range of mcr-genes, plasmid profiling, and whole-genome sequencing (WGS) were conducted. Eleven of fifty camel fecal samples (22%) yielded colonies positive for E. coli isolates carrying the mcr-1 gene on mobile genetic elements. No other mcr-gene variants and no chromosomally located colistin resistance genes were detected. Following plasmid profiling and WGS, nine E. coli isolates from eight camels were selected for in-depth analysis. E. coli sequence types (STs) identified included ST7, ST21, ST24, ST399, ST649, ST999, and STdaa2. Seven IncI2(delta) and two IncX4 plasmids were found to be associated with mcr-1 carriage in these isolates. These findings represent the first identification of mcr-1-carrying plasmids associated with camels in the Gulf region. The presence of mcr-1 in camels from this region was previously unreported and serves as a novel finding in the field of AMR surveillance.
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- 2024
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36. Analytic Hierarchy Process (AHP) Based Soil Erosion Susceptibility Mapping in Northwestern Himalayas: A Case Study of Central Kashmir Province
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Fayma Mushtaq, Majid Farooq, Anamika Shalini Tirkey, and Bashir Ahmad Sheikh
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analytical hierarchy process ,pairwise comparison matrix ,soil erosion susceptibility ,weighted sum method ,Ecology ,QH540-549.5 - Abstract
The Kashmir Valley is immensely susceptible to soil erosion due to its diverse topography and unstable geological formations in the Himalayan region. The present study helps in assessing the spatial distribution and prioritizing soil erosion zones in the Central Kashmir region covering the Sindh and Dachigam catchments. The study implemented the GIS-based analytic hierarchy process (AHP) and weighted sum method (WSM) using datasets of precipitation, geological map, soil map, and satellite imagery and derived eleven factors (topographical derivatives, LULC, soil, drainage, rainfall, lithology, wetness index and greenness of an area). The ratings and weightage were proven to be unbiased and reliable based on the observed value of the consistency ratio (CR) (i.e., 0.07). The study depicts 41% of the total area to be extremely vulnerable to soil erosion. The slope varies from 0–62° with mean of 22.12°, indicating 467.99 km2 (26%) and 281.12 km2 (15%) of the area under high and very high susceptible zones, respectively. The NDVI and NDWI maps indicate soil erosion severity covering an area of 40% and 38%, respectively, in highly susceptible zones. High drainage density and curvature zones were observed in 18.33% and 22.64% of the study area, respectively. The study will assist in the planning and implementation of conservation measures.
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- 2023
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37. Mineral Solubilizing Rhizobacterial Strains Mediated Biostimulation of Rhodes Grass Seedlings
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Shaista Javaid, Saira Mushtaq, Muhammad Zahid Mumtaz, Ghulam Rasool, Tahir Naqqash, Maha Afzal, Uzma Mushtaq, Hayssam M. Ali, Muhammad Fakhar-U-Zaman Akhtar, Ghulam Abbas, and Lingling Li
- Subjects
Bacillus ,Chloris gayana ,enzymatic activities ,mineral solubilization ,Staphylococcus ,partial gene sequencing ,Biology (General) ,QH301-705.5 - Abstract
Minerals play a dynamic role in plant growth and development. However, most of these mineral nutrients are unavailable to plants due to their presence in fixed forms, which causes significant losses in crop production. An effective strategy to overcome this challenge is using mineral solubilizing bacteria, which can convert insoluble forms of minerals into soluble ones that plants can quickly assimilate, thus enhancing their availability in nutrient-depleted soils. The main objective of the present study was to isolate and characterize mineral solubilizing rhizobacteria and to assess their plant growth-promoting potential for Rhodes grass. Twenty-five rhizobacterial strains were isolated on a nutrient agar medium. They were characterized for solubilization of insoluble minerals (phosphate, potassium, zinc, and manganese), indole acetic acid production, enzymatic activities, and various morphological traits. The selected strains were also evaluated for their potential to promote the growth of Rhodes grass seedlings. Among tested strains, eight strains demonstrated strong qualitative and quantitative solubilization of insoluble phosphate. Strain MS2 reported the highest phosphate solubilization index, phosphate solubilization efficiency, available phosphorus concentration, and reduction in medium pH. Among tested strains, 75% were positive for zinc and manganese solubilization, and 37.5% were positive for potassium solubilization. Strain MS2 demonstrated the highest quantitative manganese solubilization, while strains MS7 and SM4 reported the highest solubilization of zinc and potassium through acidifying their respective media. The strain SM4 demonstrated the most increased IAA production in the presence and absence of L-tryptophan. The majority of strains were positive for various enzymes, including urease, catalase protease, and amylase activities. However, these strains were negative for coagulase activity except strains SM7 and MS7. Based on 16S rRNA gene sequencing, six strains, namely, SM2, SM4, SM5, MS1, MS2, and MS4, were identified as Bacillus cereus, while strains SM7 and MS7 were identified as Staphylococcus saprophyticus and Staphylococcus haemolyticus. These strains significantly improved growth attributes of Rhodes grass, such as root length, shoot length, and root and shoot fresh and dry biomasses compared to the uninoculated control group. The present study highlights the significance of mineral solubilizing and enzyme-producing rhizobacterial strains as potential bioinoculants to enhance Rhodes grass growth under mineral-deficient conditions sustainably.
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- 2023
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38. Employing Metal-Enriched Polymeric Composites: An Innovative Approach for Combatting Microbes and Bacteria in Building Components in Public Places
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Agarwalla, Aaruci, primary, Ahmed, Waleed, additional, Al-Marzouqi, Ali H., additional, Rizvi, Tahir A., additional, Zaneldin, Essam, additional, and Khan, Mushtaq, additional
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- 2024
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39. Boosting Drought Tolerance in Tomatoes through Stimulatory Action of Salicylic Acid Imparted Antioxidant Defense Mechanisms
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Rai, Gyanendra Kumar, primary, Magotra, Isha, additional, Khanday, Danish Mushtaq, additional, Choudhary, Sadiya M., additional, Bhatt, Anil, additional, Gupta, Vinod, additional, Rai, Pradeep Kumar, additional, and Kumar, Pradeep, additional
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- 2024
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40. Augmenting Aquaculture Efficiency through Involutional Neural Networks and Self-Attention for Oplegnathus Punctatus Feeding Intensity Classification from Log Mel Spectrograms
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Iqbal, Usama, primary, Li, Daoliang, additional, Du, Zhuangzhuang, additional, Akhter, Muhammad, additional, Mushtaq, Zohaib, additional, Qureshi, Muhammad Farrukh, additional, and Rehman, Hafiz Abbad Ur, additional
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- 2024
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41. Real-World Data on Faricimab Switching in Treatment-Refractory Neovascular Age-Related Macular Degeneration
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Benjamin Ng, Hema Kolli, Naduviledeth Ajith Kumar, Matthew Azzopardi, Abison Logeswaran, Julius Buensalido, Bushra Mushtaq, Randhir Chavan, and Yu Jeat Chong
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faricimab ,neovascular age-related macular degeneration ,anti-VEGF ,Ang-2 ,Science - Abstract
Faricimab is a newly approved bispecific antibody for neovascular age-related macular degeneration (nAMD). Our study aims to evaluate clinical outcomes of faricimab switching in patients with treatment-refractory nAMD; determine parameters that predict these outcomes; and obtain patient subjective experience on this new injection. This is a retrospective case review with clinical and imaging data from a tertiary referral unit (Birmingham and Midland Eye Centre, UK), involving patients who were switched to faricimab between 1 January and 1 December 2023. In all, 63 eyes (54 patients) with a mean age of 79.2 ± 7.8 and mean of 41.5 ± 22.4 previous anti-VEGF injections were analysed. With a mean of 4.81 ± 1.16 faricimab injections over 6.98 ± 1.75 months, post-treatment visual acuity was logMAR 0.49 ± 0.36 and central macular thickness (CMT) was 320.3 ± 97.9 µm. After first dose, 39.1% achieved complete dryness and 89.1% had anatomical improvement. Presence of subretinal fluid was a predictor of better functional outcomes (p = 0.001, β = −0.182), while initial CMT predicted better anatomical outcomes (p = 0.001, β = 0.688). Compared to their experiences of previous anti-VEGF injections, 89% of patients reported no more discomfort and 87.0% experienced no more floaters, photopsia, or bubbles post-injection. Faricimab switching has anatomical efficacy but limited functional improvement in treatment-refractory AMD. Patient experiences of faricimab compared to previous injections were overall positive.
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- 2024
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42. Potential of Tryptamine Derivatives as Multi-Target Directed Ligands for Alzheimer’s Disease: AChE, MAO-B, and COX-2 as Molecular Targets
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Saira Asghar, Nousheen Mushtaq, Ahsaan Ahmed, Laila Anwar, Rabya Munawar, and Shamim Akhtar
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tryptamine derivatives ,Alzheimer’s disease ,multi-target-directed ligands (MTDLs) ,acetylcholinesterase (AChE) inhibitors ,monoamine oxidase (MAO-B) inhibitors ,cyclooxygenase (COX-2) inhibitors ,Organic chemistry ,QD241-441 - Abstract
Extensive research has been dedicated to develop compounds that can target multiple aspects of Alzheimer’s disease (AD) treatment due to a growing understanding of AD’s complex multifaceted nature and various interconnected pathological pathways. In the present study, a series of biological assays were performed to evaluate the potential of the tryptamine analogues synthesized earlier in our lab as multi-target-directed ligands (MTDLs) for AD. To assess the inhibitory effects of the compounds, various in vitro assays were employed. Three compounds, SR42, SR25, and SR10, displayed significant AChE inhibitory activity, with IC50 values of 0.70 µM, 0.17 µM, and 1.00 µM, respectively. These values superseded the standard drug donepezil (1.96 µM). In the MAO-B inhibition assay, SR42 (IC50 = 43.21 µM) demonstrated superior inhibitory effects as compared to tryptamine and other derivatives. Moreover, SR22 (84.08%), SR24 (79.30%), and SR42 (75.16%) exhibited notable percent inhibition against the COX-2 enzyme at a tested concentration of 100 µM. To gain insights into their binding mode and to validate the biological results, molecular docking studies were conducted. Overall, the results suggest that SR42, a 4,5 nitro-benzoyl derivative of tryptamine, exhibited significant potential as a MTDL and warrants further investigation for the development of anti-Alzheimer agents.
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- 2024
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43. Development of Inherent Vulnerability Index within Jammu Municipal Limits, India
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Simran Bharti, Adyan Ul Haq, L. T. Sasang Guite, Shruti Kanga, Fayma Mushtaq, Majid Farooq, Suraj Kumar Singh, Pankaj Kumar, and Gowhar Meraj
- Subjects
indicator-based method ,inherent vulnerability ,IPCC ,Jammu City ,NDVI ,ward level ,Science - Abstract
Evaluating inherent vulnerability, an intrinsic characteristic becomes imperative for the formulation of adaptation strategies, particularly in highly complex and vulnerable regions of Himalayas. Jammu City, situated in the north-western Himalayas within a transitional zone between the Himalayan range and the plains, is not only susceptible to intense seismic activities but also faces multiple hazards, including floods, earthquakes, avalanches, and landslides. In recent years, the region has experienced growth in population with rapid progress in infrastructure development, encompassing the construction of highways, dams, and tunnels as integral components of urban development initiatives. Therefore, this study has been conducted to assess the inherent vulnerability index (VI) in Jammu City at ward level as a function of sensitivity, adaptive capacity, and exposure, using ecological and social indicators in GIS environment. The primary objective was to identify the most vulnerable area and ascertain the corresponding municipal ward, aiming to formulate a comprehensive ranking. The 22 indicators analysed were from four major components, namely social, infrastructure, technological, and ecological. The ecological indicators like Land Surface Temperature (LST), Normalized Difference Vegetation Index (NDVI), and Land use/Land cover were derived from Landsat 8 OLI satellite data. The results show that the majority of the area of the city falls into the moderate (20%), high (25.49%), and very high (25.17%) vulnerability categories, respectively, clustered in north-western and south-western transects with densely populated residential areas. The results can assist policymakers in identification of components of inherent vulnerability for focused resource management and formulating adaptation strategies to address the current stressors in the region.
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- 2024
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44. Natural Fatty Acid Guards against Brain Endothelial Cell Death and Microvascular Pathology following Ischemic Insult in the Presence of Acute Hyperglycemia
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Zaib Ali Shaheryar, Mahtab Ahmad Khan, Huma Hameed, Muhammad Naveed Mushtaq, Sajjad Muhammad, Gamal A. Shazly, Ali Irfan, and Yousef A. Bin Jardan
- Subjects
neuroinflammation ,acute hyperglycemia ,ischemic stroke ,oxidative stress ,brain microvasculature ,Biology (General) ,QH301-705.5 - Abstract
Ischemic stroke is worsened by the presence of sudden high blood sugar levels, even in individuals without pre-existing diabetes. This elevated glucose concentration hampers the ability of energy-starved brain cells to efficiently use it as a source of energy. Consequently, this leads to the production of abundant amounts of toxic glucose metabolites, which trigger oxidative stress in the brain milieu, particularly in the microvasculature of the brain. A prominent feature of this oxidative stress is the demise of endothelial cells, causing detrimental changes in blood vessels, including a reduction in their vascular diameter, a decreased efficiency of vessel proliferation, and the impaired integrity of tight junctions. These vascular pathologies contributed to an increase in the volume of damaged tissues (infarct), an exacerbation of brain swelling (edema), and a decline in cognitive and motor functions. In a mouse model of ischemic stroke with induced acute hyperglycemia, a naturally occurring saturated fatty acid provides protective cover to the microvasculature by preventing damage related to oxidative stress. Our current research revealed that lauric acid (LA) attenuated infarct volume and reduced brain edema by reducing endothelial cell death, enhancing vessels’ diameter, promoting vascular angiogenesis, and stabilizing barrier functions. Animals administered with this natural compound showed a significant reduction in 4-HNE-positive vessels. In conclusion, natural saturated fatty acids help to preserve brain microvascular functions following ischemic insults in the presence of acute hyperglycemia.
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- 2023
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45. Evolution of Systemic Therapy in Medulloblastoma Including Irradiation-Sparing Approaches
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Naureen Mushtaq, Rahat Ul Ain, Syed Ahmer Hamid, and Eric Bouffet
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medulloblastoma ,subgrouping ,chemotherapy ,high-dose chemotherapy ,Medicine (General) ,R5-920 - Abstract
The management of medulloblastoma in children has dramatically changed over the past four decades, with the development of chemotherapy protocols aiming at improving survival and reducing long-term toxicities of high-dose craniospinal radiotherapy. While the staging and treatment of medulloblastoma were until recently based on the modified Chang’s system, recent advances in the molecular biology of medulloblastoma have revolutionized approaches in the management of this increasingly complex disease. The evolution of systemic therapies is described in this review.
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- 2023
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46. Multimodality Imaging in Advanced Heart Failure for Diagnosis, Management and Follow-Up: A Comprehensive Review
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Valeria Pergola, Matteo Cameli, Giulia Mattesi, Saima Mushtaq, Antonello D’Andrea, Andrea Igoren Guaricci, Maria Concetta Pastore, Filippo Amato, Carlo Maria Dellino, Raffaella Motta, Martina Perazzolo Marra, Santo Dellegrottaglie, Roberto Pedrinelli, Sabino Iliceto, Savina Nodari, Pasquale Perrone Filardi, Gianluca Pontone, and on behalf of the Cluster Imaging of Italian Society of Cardiology (SIC)
- Subjects
multimodality imaging ,advanced heart failure ,extracorporeal cardiac support ,cardiac transplant ,Medicine - Abstract
Advanced heart failure (AHF) presents a complex landscape with challenges spanning diagnosis, management, and patient outcomes. In response, the integration of multimodality imaging techniques has emerged as a pivotal approach. This comprehensive review delves into the profound significance of these imaging strategies within AHF scenarios. Multimodality imaging, encompassing echocardiography, cardiac magnetic resonance imaging (CMR), nuclear imaging and cardiac computed tomography (CCT), stands as a cornerstone in the care of patients with both short- and long-term mechanical support devices. These techniques facilitate precise device selection, placement, and vigilant monitoring, ensuring patient safety and optimal device functionality. In the context of orthotopic cardiac transplant (OTC), the role of multimodality imaging remains indispensable. Echocardiography offers invaluable insights into allograft function and potential complications. Advanced methods, like speckle tracking echocardiography (STE), empower the detection of acute cell rejection. Nuclear imaging, CMR and CCT further enhance diagnostic precision, especially concerning allograft rejection and cardiac allograft vasculopathy. This comprehensive imaging approach goes beyond diagnosis, shaping treatment strategies and risk assessment. By harmonizing diverse imaging modalities, clinicians gain a panoramic understanding of each patient’s unique condition, facilitating well-informed decisions. The aim is to highlight the novelty and unique aspects of recently published papers in the field. Thus, this review underscores the irreplaceable role of multimodality imaging in elevating patient outcomes, refining treatment precision, and propelling advancements in the evolving landscape of advanced heart failure management.
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- 2023
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47. Cardiac Magnetic Resonance as Risk Stratification Tool in Non-Ischemic Dilated Cardiomyopathy Referred for Implantable Cardioverter Defibrillator Therapy—State of Art and Perspectives
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Adriana Argentiero, Maria Cristina Carella, Donato Mandunzio, Giulia Greco, Saima Mushtaq, Andrea Baggiano, Fabio Fazzari, Laura Fusini, Giuseppe Muscogiuri, Paolo Basile, Paola Siena, Nicolò Soldato, Gianluigi Napoli, Vincenzo Ezio Santobuono, Cinzia Forleo, Eduard Claver Garrido, Andrea Di Marco, Gianluca Pontone, and Andrea Igoren Guaricci
- Subjects
dilated cardiomyopathy ,sudden cardiac death ,primary prevention ,implantable cardioverter defibrillator ,cardiac magnetic resonance ,Medicine - Abstract
Non-ischemic dilated cardiomyopathy (DCM) is a disease characterized by left ventricular dilation and systolic dysfunction. Patients with DCM are at higher risk for ventricular arrhythmias and sudden cardiac death (SCD). According to current international guidelines, left ventricular ejection fraction (LVEF) ≤ 35% represents the main indication for prophylactic implantable cardioverter defibrillator (ICD) implantation in patients with DCM. However, LVEF lacks sensitivity and specificity as a risk marker for SCD. It has been seen that the majority of patients with DCM do not actually benefit from the ICD implantation and, on the contrary, that many patients at risk of SCD are not identified as they have preserved or mildly depressed LVEF. Therefore, the use of LVEF as unique decision parameter does not maximize the benefit of ICD therapy. Multiple risk factors used in combination could likely predict SCD risk better than any single risk parameter. Several predictors have been proposed including genetic variants, electric indexes, and volumetric parameters of LV. Cardiac magnetic resonance (CMR) can improve risk stratification thanks to tissue characterization sequences such as LGE sequence, parametric mapping, and feature tracking. This review evaluates the role of CMR as a risk stratification tool in DCM patients referred for ICD.
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- 2023
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48. Parametric Investigation of the Effects of Electrical Discharge Machining on Plain D2 Steel
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Abual Hassan, Ray Tahir Mushtaq, Aqib Mashood Khan, and Saqib Anwar
- Subjects
electrical discharge machining ,dielectric medium ,non-conventional machining ,process parameters ,material removal rate ,Mining engineering. Metallurgy ,TN1-997 - Abstract
Electrical discharge machining (EDM) has emerged as a pivotal non-conventional production technique due to its unique capability to machine without the cutting tool’s physical contact with the workpiece, making it apt for brittle, delicate, and complex materials. This research delved into the influence of operational parameters—pulse duration (Ton), peak current (Ip), duty cycle (T), and gap voltage (Vg)—on machining attributes, namely material removal rate (MRR), electrode wear rate (EWR), and radial overcut (ROC) for AISI D2 steel. Utilizing the Taguchi L9 orthogonal array for experimental design, nine experiments were conducted, followed by signal-to-noise ratio (S/N ratio) computations. Key findings highlighted a 4.02 dB improvement in the S/N ratio for MRR, leading to a 29.13% improvement; a 10.35 dB enhancement in the S/N ratio for EWR, resulting in a 33.33% reduction; and a 2.20 dB increase in the S/N ratio for ROC, leading to a 28.57% increment. ANOVA analyses further underscored the predominant influence of all four parameters. The significance of these findings lies in optimizing the EDM process for increased efficiency, reduced tool wear, and enhanced precision, potentially leading to cost savings and improved production quality in industrial applications.
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- 2023
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49. Characteristics and Key Features of Antimicrobial Materials and Associated Mechanisms for Diverse Applications
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Aaruci Agarwalla, Waleed Ahmed, Ali H. Al-Marzouqi, Tahir A. Rizvi, Mushtaq Khan, and Essam Zaneldin
- Subjects
antimicrobial material ,3D printing ,antibacterial ,antiviral ,antimicrobial mechanism ,metals ,Organic chemistry ,QD241-441 - Abstract
Since the Fourth Industrial Revolution, three-dimensional (3D) printing has become a game changer in manufacturing, particularly in bioengineering, integrating complex medical devices and tools with high precision, short operation times, and low cost. Antimicrobial materials are a promising alternative for combating the emergence of unforeseen illnesses and device-related infections. Natural antimicrobial materials, surface-treated biomaterials, and biomaterials incorporated with antimicrobial materials are extensively used to develop 3D-printed products. This review discusses the antimicrobial mechanisms of different materials by providing examples of the most commonly used antimicrobial materials in bioengineering and brief descriptions of their properties and biomedical applications. This review will help researchers to choose suitable antimicrobial agents for developing high-efficiency biomaterials for potential applications in medical devices, packaging materials, biomedical applications, and many more.
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- 2023
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50. Wild Edible Fruits as a Source of Food and Medicine: A Study among Tribal Communities of Southern Khyber Pakhtunkhwa
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Sheikh Zain Ul Abidin, Raees Khan, Mushtaq Ahmad, Alain Cuerrier, Muhammad Zafar, Asad Ullah, Jabbar Khan, Asma Saeed, Wahidah H. Al-Qahtani, and Mohsin Kazi
- Subjects
edible wild fruits ,food security ,southern Khyber Pakhtunkhwa ,nutraceutical ,quantitative ethnobotanical indices (QEI) ,relative frequency citation (RFC) ,Botany ,QK1-989 - Abstract
Botanical surveys in all parts of Pakistan are mainly focused on ethnomedicinal uses of plants, and very little attention has been paid to documenting edible wild fruit species (EWFs). Multiple methodologies and tools were used for data collection. In a recent survey 74 EWF species belonging to 29 families were documented, including their medicinal uses for the treatment of various diseases. The most cited (23%) preparation method was raw, fresh parts. The UV and RFC of EWF species ranged from 0.08 to 0.4 and from 0.02 to 0.18, respectively. In terms of specific disease treatments and their consensus, the ICF ranged from 0 to 0.38. Sexual, gastrointestinal, and respiratory disorders had the highest use reports, and 11 species of plants had the highest FL of 100%. On the basis of uses reported by the inhabitants of seven districts of Southern Khyber Pakhtunkhwa Province, the CSI ranged from the lowest 1.3 to the highest 41. It is concluded that the traditional uses of EWF species depend mainly on socio-economic factors rather than climatic conditions or the number of species. However, there is a gradual loss of traditional knowledge among the younger generations. The present survey is the first baseline study about the socio-economic dimension of local communities regarding the use of EWF species for food as well as medicine.
- Published
- 2023
- Full Text
- View/download PDF
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