1. Untargeted Lipidomics Analysis of the Cyanobacterium Synechocystis sp. PCC 6803: Lipid Composition Variation in Response to Alternative Cultivation Setups and to Gene Deletion
- Author
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Weronika Hewelt-Belka, Paulo J. Oliveira, Agata Kot-Wasik, Paula Tamagnini, and Instituto de Investigação e Inovação em Saúde
- Subjects
0301 basic medicine ,Cyanobacteria ,Untargeted lipidomics ,untargeted lipidomics ,cultivation setup ,cyanobacteria ,lcsh:Chemistry ,Lipids / genetics ,Photosynthesis / genetics ,lipid metabolism ,Photosynthesis ,lcsh:QH301-705.5 ,Spectroscopy ,Cyanobacteria / metabolism ,Gene Expression Regulation, Bacterial / genetics ,Fatty Acids ,food and beverages ,General Medicine ,Lipidome ,Cultivation setup ,Lipids ,Computer Science Applications ,Cyanobacteria / genetics ,Chloroplast ,Metabolic Engineering ,Biochemistry ,Bacterial outer membrane ,030106 microbiology ,macromolecular substances ,Biology ,Article ,Catalysis ,Inorganic Chemistry ,Metabolic engineering ,Membrane Lipids ,03 medical and health sciences ,Fatty Acids / genetics ,Membrane Lipids / genetics ,Lipidomics ,Physical and Theoretical Chemistry ,Molecular Biology ,genetic engineering ,Organic Chemistry ,Lipid metabolism ,Gene Expression Regulation, Bacterial ,biology.organism_classification ,030104 developmental biology ,lcsh:Biology (General) ,lcsh:QD1-999 ,Genetic engineering ,bacteria ,Green algae ,Gene Deletion - Abstract
Cyanobacteria play an important role in several ecological environments, and they are widely accepted to be the ancestors of chloroplasts in modern plants and green algae. Cyanobacteria have become attractive models for metabolic engineering, with the goal of exploring them as microbial cell factories. However, the study of cyanobacterial lipids&rsquo, composition and variation, and the assessment of the lipids&rsquo, functional and structural roles have been largely overlooked. Here, we aimed at expanding the cyanobacterial lipidomic analytical pipeline by using an untargeted lipidomics approach. Thus, the lipid composition variation of the model cyanobacterium Synechocystis sp. PCC 6803 was investigated in response to both alternative cultivation setups and gene deletion. This approach allowed for detecting differences in total lipid content, alterations in fatty-acid unsaturation level, and adjustments of specific lipid species among the identified lipid classes. The employed method also revealed that the cultivation setup tested in this work induced a deeper alteration of the cyanobacterial cell lipidome than the deletion of a gene that results in a dramatic increase in the release of lipid-rich outer membrane vesicles. This study further highlights how growth conditions must be carefully selected when cyanobacteria are to be engineered and/or scaled-up for lipid or fatty acids production.
- Published
- 2020
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