1. The Heterochromatin protein 1 is a regulator in RNA splicing precision deficient in ulcerative colitis
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Jorge Mata-Garrido, Yao Xiang, Yunhua Chang-Marchand, Caroline Reisacher, Elisabeth Ageron, Ida Chiara Guerrera, Iñigo Casafont, Aurelia Bruneau, Claire Cherbuy, Xavier Treton, Anne Dumay, Eric Ogier-Denis, Eric Batsché, Mickael Costallat, Gwladys Revêchon, Maria Eriksson, Christian Muchardt, Laurence Arbibe, Universidad de Cantabria, Institut Necker Enfants-Malades (INEM - UM 111 (UMR 8253 / U1151)), Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Structure Fédérative de Recherche Necker (SFR Necker - UMS 3633 / US24), Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Marqués de Valdecilla Research Institute - Instituto de Investigación Marqués de Valdecilla [Santander] (IDIVAL), Universidad de Cantabria [Santander], MICrobiologie de l'ALImentation au Service de la Santé (MICALIS), AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Paris Center for Microbiome Medicine (FHU PaCeMM), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-CHU Pitié-Salpêtrière [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Centre de recherche sur l'Inflammation (CRI (UMR_S_1149 / ERL_8252 / U1149)), Oncogenesis, Stress, Signaling (OSS), Université de Rennes (UR)-CRLCC Eugène Marquis (CRLCC)-Institut National de la Santé et de la Recherche Médicale (INSERM), Institut de Biologie Paris Seine (IBPS), Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Adaptation Biologique et Vieillissement = Biological Adaptation and Ageing (B2A), Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Institut de Biologie Paris Seine (IBPS), Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Karolinska Institutet [Stockholm], This work has been supported by the «Agence National de la Recherche» (ANR) grant (EPI-CURE, R16154KK by L.A.) and REVIVE (by C.M.), an ANR ‘Laboratoire d’Excellence’ program (2011–2021)., ANR-16-CE15-0006,EPI-CURE,Le régulateur épigénétique HP1 dans la tolérance intestinale et les maladies inflammatoires intestinales chroniques: fonctions et potentiel thérapeutique(2016), and ANR-10-LABX-0073,REVIVE,Stem Cells in Regenerative Biology and Medicine(2010)
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RNA splicing ,General Physics and Astronomy ,Ulcerative ,[SDV.CAN]Life Sciences [q-bio]/Cancer ,General Biochemistry, Genetics and Molecular Biology ,Mice ,Animals ,Humans ,animal ,genetics ,human ,gene ,mouse ,ulcerative colitis ,Inflammation ,Multidisciplinary ,progeria ,General Chemistry ,Colitis ,Chromobox Protein Homolog 5 ,gene expression ,RNA ,Colitis, Ulcerative ,precision ,protein ,metabolism - Abstract
Defects in RNA splicing have been linked to human disorders, but remain poorly explored in inflammatory bowel disease (IBD). Here, we report that expression of the chromatin and alternative splicing regulator HP1? is reduced in ulcerative colitis (UC). Accordingly, HP1? gene inactivation in the mouse gut epithelium triggers IBD-like traits, including inflammation and dysbiosis. In parallel, we find that its loss of function broadly increases splicing noise, favoring the usage of cryptic splice sites at numerous genes with functions in gut biology. This results in the production of progerin, a toxic splice variant of prelamin A mRNA, responsible for the Hutchinson-Gilford Progeria Syndrome of premature aging. Splicing noise is also extensively detected in UC patients in association with inflammation, with progerin transcripts accumulating in the colon mucosa. We propose that monitoring HP1? activity and RNA splicing precision can help in the management of IBD and, more generally, of accelerated aging. Funding: This work has been supported by the «Agence National de la Recherche» (ANR) grant (EPI-CURE, R16154KK by L.A.) and REVIVE (by C.M.), an ANR ‘Laboratoire d’Excellence’ program (2011–2021).
- Published
- 2022
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