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Animal breeders have exploited many technological advances for increasing genetic gain in economically and functionally important traits. The implementation of such technologies in routine breeding programs has permitted genetic gains in traditional milk, meat and egg production traits as well as, more recently, in low-heritability traits like health, fertility, and even behavior. As global demand for animal products increases, animal breeders must ensure the technologies, methods and strategies employed are sustainable, to consider the many emerging technologies that are currently being investigated in various fields, and to ensure a social license to continue producing animal products. Here we discuss the societal, ethical, environmental, and economical aspects of sustainability in the context of livestock breeding. We review a number of technologies that have helped shape livestock breeding programs in the past and present, along with those potentially forthcoming. These tools have materialized in the areas of reproduction, genotyping and sequencing, genetic modification, epigenetics, and other areas of “omics” technologies. Although many of these technologies bring encouraging opportunities for genetic improvement of livestock populations, their applications and benefits need to be weighed with their impacts on sustainability.

Effective application of genomic selection methodologies require genomic information, population-based pedigree data, and high-quality phenotypes. The implementation of such selection programs can increase the accuracy of breeding values, therefore improving the ability to estimate the genetic merit of livestock. In particular, traits with low heritability are amenable to genomic selection. The objective of this presentation is to outline improvement of traits such as livability, disease resistance, fertility, and other health and welfare traits in turkeys, which could considerably advance breeding programs. The aim of this study was to apply different methodologies (ssGBLUP, random regression approaches, etc.) to novel and conventional traits collected in commercial turkey lines (15,000 turkeys genotyped at 65K). This reference population was used to assess the increase in accuracy of selection using genomic information, which ranged from 0 to +0.3, depending on the trait. A further goal of the study was to monitor inbreeding within the different lines. A large number of high-quality phenotypes related to fertility, growth, production, and carcass composition were collected, as well as additional health and behaviour phenotypes related to livability. These traits are being developed for use in performance testing. Furthermore, meat quality (e.g. white striation, water holding capacity, pH, sheer force and colour, etc.) and total carcass composition phenotypes were analysed. With improved methodology, more detailed phenotypic information, and comprehensive data collection and integration, we present more accurate selection of parent stock for application in applied poultry breeding programs.

Increased focus on sustainability is driving a need for environmental efficiency traits in dairy cattle breeding. Breeding for reduced emission of methane, an inevitable product of fermentation in ruminants, is increasingly being explored. Methods to measure methane emissions vary but can be impacted by cow behaviour. As part of an on-going project to develop genomic tools for breeding resilient dairy cows, we explored changes in cow behaviour over time during methane emission measurements. First lactation heifers (n = 49) were tested in tie-stall housing at a research herd in Ontario, Canada. Animals were tested over 5 consecutive days at 08:00h, 12:00h, and 16:00h each day for a 10-min period using the GreenFeed system (C-Lock Inc., Rapid City, SD, USA). The frequency of movement (body shifts and leg lifts) and the number of seconds the cow removed her head from the machine were recorded. The effect of day on the average frequency of movements or time the cow’s head was outside of the machine was assessed using a repeated measures model. In general, cows moved their legs the most on day 1 of testing (76 ± 5.0 movements per 10 min), after which it numerically decreased (e.g., day 5: 68 ± 5.0 movements per 10 min, P = 0.1110). A similar effect was observed for seconds the cow had her head out of the machine (P = 0.0650). Cows spent an average of 39 ± 5.7 sec with their head outside of the machine on day 1 versus 25 ± 3.6 sec on day 5 (P = 0.0499). These preliminary results suggest that cows adapt to the testing conditions; however, changes in their behaviour were minor and do not intervene with recording of methane emissions using the GreenFeed system.

Current production systems for commercial turkeys can lead to challenges including the development of footpad dermatitis (FPD) and aggressive pecking. Both have welfare and economic implications for turkey production. To date, there have been no epidemiological studies conducted in Canada on risk factors for either FPD or aggressive pecking. In this study, over 500 turkey farmers across Canada will receive a cross-sectional survey which includes a health-scoring guide and a questionnaire. Farmers will be asked to record the health status of 30 turkeys on their farms using the illustrated instructions to score head injuries, skin damage, and FPD. The information on head injuries and skin damage will provide insight into the prevalence of aggressive pecking within the flock. Farmers will score these areas on a three-point scale where a score of zero indicates no damage and two indicates severe damage. Additionally, an inventory of housing and management practices will be taken on each farm using a questionnaire covering topics on bird characteristics, lighting, air quality, litter quality, feeding, and health. The data obtained from this survey will be used to 1) estimate the prevalence of FPD and pecking injuries, 2) describe housing and management practices, 3) identify risk factors for FPD and pecking injuries and 4) make recommendations to reduce the prevalence of FPD and pecking injuries. With the information from this study we plan to develop a management tool tailored to the Canadian industry to reduce FPD and pecking injuries on Canadian farms.