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Located at the crossroad of the Palearctic, Saharo-Arabian, and Oriental zoogeographic realms, and with its great environmental diversity, Iran harbors a high complexity and richness of fauna and flora. Knowledge about the Iranian mammal fauna has greatly increased over recent years thanks to the growing availability of molecular tools, which brought marked changes in taxonomy, but also because of intensive field surveys resulting in growing distributional data. These data are, however, scattered throughout numerous publications and unpublished sources, most of which are difficult to access. Here, we present a comprehensive review of the current mammal species taxonomies with an update on systematics and their spatial distribution based on all possible sources spanning the period between 1758 and today. We updated the geographical distribution of all Iranian land mammals, providing their regional extent of occurrence and area of occupancy, as well as mapped species richness. Based on this information, we then assessed the conservation status of Iran's mammals using the International Union for Conservation of Nature Red List criteria, providing a regional status assessment. The current species list of terrestrial mammals of Iran comprises 192 species from 34 families, of which eight species are endemics. Since the publication of Karami et al. (2008), 13 new species or new records have been added to the mammals of Iran and 32 changes in classification or nomenclature have been made. The Alborz and Zagros mountains accumulate the highest species richness. Nearly 13% of the species in Iran are threatened, and a further 14% are near to qualifying for threatened status. With the current review, we provide an up-to-date summary of the current knowledge about the terrestrial mammals of Iran that can serve as a guideline for mammalogists, a reference for monitoring regional biodiversity status and trends, and a framework for planning management actions to sustain biodiversity conservation. [ABSTRACT FROM AUTHOR]

Transcaucasia comprises a key region for understanding the history of both the hybrid zone between house mouse lineages and the dispersal of the Neolithic way of life outside its Near Eastern cradle. The opportunity to document the colonization history of both men and mice in Transcaucasia was made possible by the discovery of mouse remains accumulated in pits from a 6000-year-old farming village in the Nakhchivan ( Autonomous Republic of Nakhchivan, Azerbaijan). The present study investigated their taxonomy and most likely dispersal path through the identification of the Mus lineage to which they might belong using a geometric morphometric approach of dental traits distances between archaeological and modern populations of the different Mus lineages of South- West Asia. We demonstrate that the mouse remains trapped in the deep storage pits of the dwelling belong to the Mus musculus domesticus from the Near East, with dental shapes similar to current populations in Northern Syria. These results strongly suggest that the domesticus lineage was dispersed into Transcaucasia from the upper Euphrates valley by Neolithic migration, some time between the 7th and 5th millennium BC, providing substantial evidence to back up the scenario featuring near-eastern stimuli in the emergence of agriculture in the South Caucasus. The domesticus mitochondrial DNA signature of the current house mouse in the same location 5000 years later, as well as their turnover towards a subspecies musculus/castaneus phenotype, suggests that early domesticus colonizers hybridized with a later musculus (and maybe castaneus) dispersal originating from south of the Caspian Sea and/or Northern Caucasia. © 2013 The Linnean Society of London [ABSTRACT FROM AUTHOR]

Accurate knowledge of the biogeographic history and precise characterization of the genetic make-up of a taxon are essential to investigate speciation processes and achieve sound evolutionary comparisons. A case in point is the house mouse Mus musculus and its three parapatric subspecies, which have become a model for such studies. However, although Mus musculus domesticus and Mus musculus musculus constitute genetically well-characterized homogeneous entities, the case of Mus musculus castaneus remains poorly documented. Using mtDNA control region variation in a sample of 402 individuals, covering much of the distribution range of this subspecies, we identify four haplogroups that show largely non-overlapping geographic distributions. They appear to have undergone post- Neolithic expansions, presumably through commensalism with humans, but exhibit a much more ancient divergence. These results point towards a strong past subdivision and a vicariant origin of the different haplogroups, with each retaining a subfraction of the total variability. The genomic consequences of this spatial heterogeneity on the present taxonomic partition will have to be appraised, and may challenge the use of this subspecies as a single entity in evolutionary studies. © 2012 The Linnean Society of London, Biological Journal of the Linnean Society, 2012, ••, ••-••. [ABSTRACT FROM AUTHOR]

The worldwide distributed house mouse, Mus musculus, is subdivided into at least three lineages, Mus musculus musculus, Mus musculus domesticus, and Mus musculus castaneus. The subspecies occur parapatrically in a region considered to be the cradle of the species in Southern Asia ('central region'), as well as in the rest of the world ('peripheral region'). The morphological evolution of this species in a phylogeographical context is studied using a landmark-based approach on mandible morphology of different populations of the three lineages. The morphological variation increases from central to peripheral regions at the population and subspecific levels, confirming a centrifugal sub-speciation within this species. Furthermore, the outgroup comparison with sister species suggests that M. musculus musculus and populations of all subspecies inhabiting the Iranian plateau have retained a more ancestral mandible morphology, suggesting that this region may represent one of the relevant places of the origin of the species. Mus musculus castaneus, both from central and peripheral regions, is morphologically the most variable and divergent subspecies. Finally, the results obtained in the present study suggest that the independent evolution to commensalism in the three lineages is not accompanied by a convergence detectable on jaw morphology. © 2012 The Linnean Society of London, Biological Journal of the Linnean Society, 2012, 105, 635-647. [ABSTRACT FROM AUTHOR]