1. Common and Low Frequency Variants in MERTK Are Independently Associated with Multiple Sclerosis Susceptibility with Discordant Association Dependent upon HLA-DRB1*15:01 Status
- Author
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Simon J. Foote, Michele D. Binder, Lauren Giuffrida, Alan G. Baxter, Margaret A. Jordan, Trevor J. Kilpatrick, Daniel Merlo, Tim Spelman, Melissa Gresle, Louise Laverick, Andrew Fox, ANZgene, Marzena J. Fabis-Pedrini, Rainer Akkermann, Sarah E. Calvert, Gerry Z. M. Ma, Ashwyn A. Perera, Laura J. Johnson, Helmut Butzkueven, Grace Foo, and Judith Field
- Subjects
0301 basic medicine ,Cancer Research ,Heredity ,Molecular biology ,Gene Expression ,Genome-wide association study ,Monocytes ,White Blood Cells ,Sequencing techniques ,Gene Frequency ,Animal Cells ,Risk Factors ,Demyelinating disease ,Medicine and Health Sciences ,Genetics (clinical) ,Genetics ,Neurodegenerative Diseases ,RNA sequencing ,MERTK Gene ,Genetic Mapping ,Neurology ,Cellular Types ,Research Article ,Multiple Sclerosis ,lcsh:QH426-470 ,Immune Cells ,Immunology ,Variant Genotypes ,Biology ,C-Mer Tyrosine Kinase ,Polymorphism, Single Nucleotide ,Autoimmune Diseases ,03 medical and health sciences ,Proto-Oncogene Proteins ,medicine ,Genetic predisposition ,Humans ,Genetic Predisposition to Disease ,Ecology, Evolution, Behavior and Systematics ,Alleles ,Genetic Association Studies ,Evolutionary Biology ,Blood Cells ,Population Biology ,c-Mer Tyrosine Kinase ,GAS6 ,Multiple sclerosis ,Biology and Life Sciences ,Receptor Protein-Tyrosine Kinases ,Cell Biology ,MERTK ,medicine.disease ,Demyelinating Disorders ,Research and analysis methods ,lcsh:Genetics ,030104 developmental biology ,Molecular biology techniques ,Haplotypes ,Gene Expression Regulation ,Genetic Loci ,Clinical Immunology ,Clinical Medicine ,Population Genetics ,HLA-DRB1 Chains - Abstract
Multiple Sclerosis (MS) is a chronic inflammatory demyelinating disease of the central nervous system. The risk of developing MS is strongly influenced by genetic predisposition, and over 100 loci have been established as associated with susceptibility. However, the biologically relevant variants underlying disease risk have not been defined for the vast majority of these loci, limiting the power of these genetic studies to define new avenues of research for the development of MS therapeutics. It is therefore crucial that candidate MS susceptibility loci are carefully investigated to identify the biological mechanism linking genetic polymorphism at a given gene to the increased chance of developing MS. MERTK has been established as an MS susceptibility gene and is part of a family of receptor tyrosine kinases known to be involved in the pathogenesis of demyelinating disease. In this study we have refined the association of MERTK with MS risk to independent signals from both common and low frequency variants. One of the associated variants was also found to be linked with increased expression of MERTK in monocytes and higher expression of MERTK was associated with either increased or decreased risk of developing MS, dependent upon HLA-DRB1*15:01 status. This discordant association potentially extended beyond MS susceptibility to alterations in disease course in established MS. This study provides clear evidence that distinct polymorphisms within MERTK are associated with MS susceptibility, one of which has the potential to alter MERTK transcription, which in turn can alter both susceptibility and disease course in MS patients., Author Summary Multiple sclerosis (MS) is the most common neurological disease of young Caucasian adults. Oligodendrocytes are the key cell type damaged in MS, a process that is accompanied by loss of the myelin sheath that these cells produce, resulting in demyelination and ultimately in secondary damage to nerve cells. Susceptibility to MS is strongly influenced by genes, and over 100 genes have now been linked with the risk of developing MS. However, surprisingly little is known about the biological mechanism by which any one of these genes increases the probability of developing MS. In this study we have explored in detail the links between one known MS risk gene, MERTK, and MS susceptibility. We found that a number of different alterations in the MERTK gene are independently associated with the risk of developing MS. One these changes was also linked with changes in the level of expression of MERTK in monocytes, an immune cell type known to be involved in the etiology of MS. In an unexpected result, we found this expression-linked alteration in MERTK was either protective or risk-associated, depending on the genotype of the individual at another well known MS risk gene known as HLA-DRB1. In addition, we found that not only were alterations in MERTK associated with MS susceptibility, but potentially with ongoing disease course, indicating that MERTK may be a good target for the development of novel MS therapeutics.
- Published
- 2016