1. Developing a prognostic micro-RNA signature for human cervical carcinoma
- Author
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Michael Milosevic, David W. Hedley, Angela B.Y. Hui, Jeff Bruce, Rui Yan, Philip Wong, Shaoming Yin, Fei-Fei Liu, Paul C. Boutros, Melania Pintilie, Anthony Fyles, Christine How, Richard P. Hill, Daryl Waggott, Blaise A. Clarke, and Liu, Xuefeng
- Subjects
Uterine Cervical Neoplasms ,lcsh:Medicine ,Disease ,Bioinformatics ,Cervical Cancer ,0302 clinical medicine ,80 and over ,Medicine ,Young adult ,lcsh:Science ,Cancer ,Cervical cancer ,Aged, 80 and over ,0303 health sciences ,screening and diagnosis ,Multidisciplinary ,Paraffin Embedding ,Middle Aged ,Prognosis ,3. Good health ,Gene Expression Regulation, Neoplastic ,Detection ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Female ,Research Article ,Biotechnology ,Adult ,Tumour heterogeneity ,General Science & Technology ,Concordance ,and over ,Disease-Free Survival ,03 medical and health sciences ,Young Adult ,Rare Diseases ,Clinical Research ,microRNA ,Genetics ,Humans ,Cervix ,030304 developmental biology ,Aged ,Neoplastic ,business.industry ,Gene Expression Profiling ,Human Genome ,lcsh:R ,Reproducibility of Results ,medicine.disease ,4.1 Discovery and preclinical testing of markers and technologies ,Gene expression profiling ,MicroRNAs ,Gene Expression Regulation ,lcsh:Q ,business - Abstract
Cervical cancer remains the third most frequently diagnosed and fourth leading cause of cancer death in women worldwide. We sought to develop a micro-RNA signature that was prognostic for disease-free survival, which could potentially allow tailoring of treatment for cervical cancer patients. A candidate prognostic 9-micro-RNA signature set was identified in the training set of 79 frozen specimens. However, three different approaches to validate this signature in an independent cohort of 87 patients with formalin-fixed paraffin-embedded (FFPE) specimens, were unsuccessful. There are several challenges and considerations associated with developing a prognostic micro-RNA signature for cervical cancer, namely: tumour heterogeneity, lack of concordance between frozen and FFPE specimens, and platform selection for global micro-RNA expression profiling in this disease. Our observations provide an important cautionary tale for future miRNA signature studies for cervical cancer, which can also be potentially applicable to miRNA profiling studies involving other types of human malignancies.
- Published
- 2015