1. Genetic associations with radiological damage in rheumatoid arthritis: Meta-analysis of seven genome-wide association studies of 2,775 cases
- Author
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Jing Cui, Peter K. Gregersen, Nancy A. Shadick, Charles Curtis, Hamel Patel, Andrew P. Cope, Ann W. Morgan, Matthew Traylor, Annette H M van der Helm-van Mil, Ian C. Scott, Rachel Knevel, Stephen Newhouse, Paul Emery, Philip G. Conaghan, Michael E. Weinblatt, Westra Harm-Jan, John W. Taylor, Cathryn M. Lewis, Sophia Steer, and Jennifer H. Barrett
- Subjects
0301 basic medicine ,Oncology ,Male ,Linkage disequilibrium ,Arthritis ,Genome-wide association study ,Arthritis, Rheumatoid ,Cohort Studies ,Geographical Locations ,0302 clinical medicine ,Mathematical and Statistical Techniques ,Ethnicity ,Medicine and Health Sciences ,Aged, 80 and over ,Multidisciplinary ,Statistics ,Genomics ,Middle Aged ,Metaanalysis ,Europe ,Meta-analysis ,Physical Sciences ,Metallurgy ,Medicine ,Female ,Health Services Research ,Research Article ,medicine.medical_specialty ,Science ,Immunology ,Materials Science ,Single-nucleotide polymorphism ,Rheumatoid Arthritis ,Research and Analysis Methods ,Polymorphism, Single Nucleotide ,Autoimmune Diseases ,Molecular Genetics ,03 medical and health sciences ,Rheumatology ,Internal medicine ,medicine ,Genome-Wide Association Studies ,Genetics ,Alloys ,SNP ,Rheumatoid factor ,Humans ,Statistical Methods ,Molecular Biology ,Genetic association ,Aged ,030203 arthritis & rheumatology ,business.industry ,Biology and Life Sciences ,Computational Biology ,Human Genetics ,medicine.disease ,Genome Analysis ,R1 ,Brass ,Health Care ,030104 developmental biology ,People and Places ,Genetics of Disease ,Clinical Immunology ,Clinical Medicine ,business ,RA ,Mathematics ,Genome-Wide Association Study - Abstract
Background\ud Previous studies of radiological damage in rheumatoid arthritis (RA) have used candidate-gene approaches, or evaluated single genome-wide association studies (GWAS). We undertook the first meta-analysis of GWAS of RA radiological damage to: (1) identify novel genetic loci for this trait; and (2) test previously validated variants.\ud \ud Methods\ud Seven GWAS (2,775 RA cases, of a range of ancestries) were combined in a meta-analysis. Radiological damage was assessed using modified Larsen scores, Sharp van Der Heijde scores, and erosive status. Single nucleotide polymophsim (SNP) associations with radiological damage were tested at a single time-point using regression models. Primary analyses included age and disease duration as covariates. Secondary analyses also included rheumatoid factor (RF). Meta-analyses were undertaken in trans-ethnic and European-only cases.\ud \ud Results\ud In the trans-ethnic primary meta-analysis, one SNP (rs112112734) in close proximity to HLA-DRB1, and strong linkage disequilibrium with the shared-epitope, attained genome-wide significance (P = 4.2x10-8). In the secondary analysis (adjusting for RF) the association was less significant (P = 1.7x10-6). In both trans-ethnic primary and secondary meta-analyses 14 regions contained SNPs with associations reaching P
- Published
- 2019