7 results on '"Shiho Morimoto"'
Search Results
2. Correction: Critical Role of an Antiviral Stress Granule Containing RIG-I and PKR in Viral Detection and Innate Immunity.
- Author
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Koji Onomoto, Michihiko Jogi, Ji-Seung Yoo, Ryo Narita, Shiho Morimoto, Azumi Takemura, Suryaprakash Sambhara, Atushi Kawaguchi, Suguru Osari, Kyosuke Nagata, Tomoh Matsumiya, Hideo Namiki, Mitsutoshi Yoneyama, and Takashi Fujita
- Subjects
Medicine ,Science - Published
- 2012
- Full Text
- View/download PDF
3. Critical role of an antiviral stress granule containing RIG-I and PKR in viral detection and innate immunity.
- Author
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Koji Onomoto, Michihiko Jogi, Ji-Seung Yoo, Ryo Narita, Shiho Morimoto, Azumi Takemura, Suryaprakash Sambhara, Atushi Kawaguchi, Suguru Osari, Kyosuke Nagata, Tomoh Matsumiya, Hideo Namiki, Mitsutoshi Yoneyama, and Takashi Fujita
- Subjects
Medicine ,Science - Abstract
Retinoic acid inducible gene I (RIG-I)-like receptors (RLRs) function as cytoplasmic sensors for viral RNA to initiate antiviral responses including type I interferon (IFN) production. It has been unclear how RIG-I encounters and senses viral RNA. To address this issue, we examined intracellular localization of RIG-I in response to viral infection using newly generated anti-RIG-I antibody. Immunohistochemical analysis revealed that RLRs localized in virus-induced granules containing stress granule (SG) markers together with viral RNA and antiviral proteins. Because of similarity in morphology and components, we termed these aggregates antiviral stress granules (avSGs). Influenza A virus (IAV) deficient in non-structural protein 1 (NS1) efficiently generated avSGs as well as IFN, however IAV encoding NS1 produced little. Inhibition of avSGs formation by removal of either the SG component or double-stranded RNA (dsRNA)-dependent protein kinase (PKR) resulted in diminished IFN production and concomitant enhancement of viral replication. Furthermore, we observed that transfection of dsRNA resulted in IFN production in an avSGs-dependent manner. These results strongly suggest that the avSG is the locus for non-self RNA sensing and the orchestration of multiple proteins is critical in the triggering of antiviral responses.
- Published
- 2012
- Full Text
- View/download PDF
4. Dysregulation of IFN system can lead to poor response to pegylated interferon and ribavirin therapy in chronic hepatitis C.
- Author
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Koji Onomoto, Shiho Morimoto, Takahisa Kawaguchi, Hidenori Toyoda, Masami Tanaka, Masahiko Kuroda, Kazuko Uno, Takashi Kumada, Fumihiko Matsuda, Kunitada Shimotohno, Takashi Fujita, and Yoshiki Murakami
- Subjects
Medicine ,Science - Abstract
BACKGROUND:Despite being expensive, the standard combination of pegylated interferon (Peg-IFN)-α and ribavirin used to treat chronic hepatitis C (CH) results in a moderate clearance rate and a plethora of side effects. This makes it necessary to predict patient outcome so as to improve the accuracy of treatment. Although the antiviral mechanism of genetically altered IL28B is unknown, IL28B polymorphism is considered a good predictor of IFN combination treatment outcome. METHODOLOGY:Using microarray, we quantified the expression profile of 237 IFN related genes in 87 CH liver biopsy specimens to clarify the relationship between IFN pathway and viral elimination, and to predict patients' clinical outcome. In 72 out of 87 patients we also analyzed IL28B polymorphism (rs8099917). PRINCIPAL FINDINGS:Five IFN related-genes (IFI27, IFI 44, ISG15, MX1, and OAS1) had expression levels significantly higher in nonresponders (NR) than in normal liver (NL) and sustained virological responders (SVR); this high expression was also frequently seen in cases with the minor (TG or GG) IL28B genotype. The expression pattern of 31 IFN related-genes also differed significantly between NR and NL. We predicted drug response in NR with 86.1% accuracy by diagonal linear discriminant analysis (DLDA). CONCLUSION:IFN system dysregulation before treatment was associated with poor IFN therapy response. Determining IFN related-gene expression pattern based on patients' response to combination therapy, allowed us to predict drug response with high accuracy. This method can be applied to establishing novel antiviral therapies and strategies for patients using a more individual approach.
- Published
- 2011
- Full Text
- View/download PDF
5. Virus-infection or 5'ppp-RNA activates antiviral signal through redistribution of IPS-1 mediated by MFN1.
- Author
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Kazuhide Onoguchi, Koji Onomoto, Shiori Takamatsu, Michihiko Jogi, Azumi Takemura, Shiho Morimoto, Ilkka Julkunen, Hideo Namiki, Mitsutoshi Yoneyama, and Takashi Fujita
- Subjects
Immunologic diseases. Allergy ,RC581-607 ,Biology (General) ,QH301-705.5 - Abstract
In virus-infected cells, RIG-I-like receptor (RLR) recognizes cytoplasmic viral RNA and triggers innate immune responses including production of type I and III interferon (IFN) and the subsequent expression of IFN-inducible genes. Interferon-beta promoter stimulator 1 (IPS-1, also known as MAVS, VISA and Cardif) is a downstream molecule of RLR and is expressed on the outer membrane of mitochondria. While it is known that the location of IPS-1 is essential to its function, its underlying mechanism is unknown. Our aim in this study was to delineate the function of mitochondria so as to identify more precisely its role in innate immunity. In doing so we discovered that viral infection as well as transfection with 5'ppp-RNA resulted in the redistribution of IPS-1 to form speckle-like aggregates in cells. We further found that Mitofusin 1 (MFN1), a key regulator of mitochondrial fusion and a protein associated with IPS-1 on the outer membrane of mitochondria, positively regulates RLR-mediated innate antiviral responses. Conversely, specific knockdown of MFN1 abrogates both the virus-induced redistribution of IPS-1 and IFN production. Our study suggests that mitochondria participate in the segregation of IPS-1 through their fusion processes.
- Published
- 2010
- Full Text
- View/download PDF
6. Critical role of an antiviral stress granule containing RIG-I and PKR in viral detection and innate immunity
- Author
-
Suguru Osari, Michihiko Jogi, Kyosuke Nagata, Shiho Morimoto, Tomoh Matsumiya, Suryaprakash Sambhara, Ryo Narita, Koji Onomoto, Azumi Takemura, Takashi Fujita, Ji-Seung Yoo, Atushi Kawaguchi, Mitsutoshi Yoneyama, and Hideo Namiki
- Subjects
Viral Diseases ,viruses ,lcsh:Medicine ,Antibodies, Viral ,Biochemistry ,DEAD-box RNA Helicases ,Mice ,eIF-2 Kinase ,Interferon ,Chlorocebus aethiops ,Molecular Cell Biology ,lcsh:Science ,Immune Response ,Cellular Stress Responses ,Mice, Knockout ,Multidisciplinary ,RIG-I ,Immunohistochemistry ,Innate Immunity ,RNA silencing ,Infectious Diseases ,Influenza A virus ,Interferon Type I ,Cytochemistry ,DEAD Box Protein 58 ,RNA, Viral ,Medicine ,Immunohistochemical Analysis ,Immunocytochemistry ,Research Article ,medicine.drug ,Immunology ,Biology ,Cytoplasmic Granules ,Immune Activation ,Stress granule ,Orthomyxoviridae Infections ,medicine ,Animals ,Humans ,Immunoassays ,Vero Cells ,lcsh:R ,Immunity ,RNA ,Immune Defense ,Fibroblasts ,Virology ,Protein kinase R ,Immunity, Innate ,Influenza ,Viral replication ,Immunologic Techniques ,lcsh:Q ,HeLa Cells - Abstract
Retinoic acid inducible gene I (RIG-I)-like receptors (RLRs) function as cytoplasmic sensors for viral RNA to initiate antiviral responses including type I interferon (IFN) production. It has been unclear how RIG-I encounters and senses viral RNA. To address this issue, we examined intracellular localization of RIG-I in response to viral infection using newly generated anti-RIG-I antibody. Immunohistochemical analysis revealed that RLRs localized in virus-induced granules containing stress granule (SG) markers together with viral RNA and antiviral proteins. Because of similarity in morphology and components, we termed these aggregates antiviral stress granules (avSGs). Influenza A virus (IAV) deficient in non-structural protein 1 (NS1) efficiently generated avSGs as well as IFN, however IAV encoding NS1 produced little. Inhibition of avSGs formation by removal of either the SG component or double-stranded RNA (dsRNA)-dependent protein kinase (PKR) resulted in diminished IFN production and concomitant enhancement of viral replication. Furthermore, we observed that transfection of dsRNA resulted in IFN production in an avSGs-dependent manner. These results strongly suggest that the avSG is the locus for non-self RNA sensing and the orchestration of multiple proteins is critical in the triggering of antiviral responses.
- Published
- 2012
7. Dysregulation of IFN System Can Lead to Poor Response to Pegylated Interferon and Ribavirin Therapy in Chronic Hepatitis C
- Author
-
Shiho Morimoto, Takashi Kumada, Takashi Fujita, Koji Onomoto, Yoshiki Murakami, Fumihiko Matsuda, Masami Tanaka, Hidenori Toyoda, Kazuko Uno, Masahiko Kuroda, Takahisa Kawaguchi, and Kunitada Shimotohno
- Subjects
Male ,Microarrays ,Gastroenterology and hepatology ,Gene Expression ,lcsh:Medicine ,Genome-wide association study ,medicine.disease_cause ,Hepatitis ,Polyethylene Glycols ,chemistry.chemical_compound ,Pegylated interferon ,Treatment Failure ,Precision Medicine ,lcsh:Science ,Lead (electronics) ,Multidisciplinary ,Interleukin ,Genomics ,Middle Aged ,Prognosis ,Hepatitis C ,Recombinant Proteins ,Infectious hepatitis ,Treatment Outcome ,Medicine ,Infectious diseases ,Drug Therapy, Combination ,Female ,Research Article ,medicine.drug ,Drugs and Devices ,Drug Research and Development ,Hepatitis C virus ,Alpha interferon ,Viral diseases ,Interferon alpha-2 ,Biology ,Antiviral Agents ,Molecular Genetics ,Predictive Value of Tests ,Ribavirin ,Genetics ,medicine ,Humans ,Genetic Association Studies ,Liver diseases ,Aged ,Clinical Genetics ,Polymorphism, Genetic ,Gene Expression Profiling ,Interleukins ,lcsh:R ,Computational Biology ,Interferon-alpha ,Human Genetics ,Hepatitis C, Chronic ,Gene Expression Regulation ,chemistry ,Pharmacogenetics ,Immunology ,lcsh:Q ,Interferons ,Genome Expression Analysis - Abstract
Background Despite being expensive, the standard combination of pegylated interferon (Peg-IFN)- α and ribavirin used to treat chronic hepatitis C (CH) results in a moderate clearance rate and a plethora of side effects. This makes it necessary to predict patient outcome so as to improve the accuracy of treatment. Although the antiviral mechanism of genetically altered IL28B is unknown, IL28B polymorphism is considered a good predictor of IFN combination treatment outcome. Methodology Using microarray, we quantified the expression profile of 237 IFN related genes in 87 CH liver biopsy specimens to clarify the relationship between IFN pathway and viral elimination, and to predict patients' clinical outcome. In 72 out of 87 patients we also analyzed IL28B polymorphism (rs8099917). Principal Findings Five IFN related-genes (IFI27, IFI 44, ISG15, MX1, and OAS1) had expression levels significantly higher in nonresponders (NR) than in normal liver (NL) and sustained virological responders (SVR); this high expression was also frequently seen in cases with the minor (TG or GG) IL28B genotype. The expression pattern of 31 IFN related-genes also differed significantly between NR and NL. We predicted drug response in NR with 86.1% accuracy by diagonal linear discriminant analysis (DLDA). Conclusion IFN system dysregulation before treatment was associated with poor IFN therapy response. Determining IFN related-gene expression pattern based on patients' response to combination therapy, allowed us to predict drug response with high accuracy. This method can be applied to establishing novel antiviral therapies and strategies for patients using a more individual approach.
- Published
- 2011
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