6 results on '"Walter de Back"'
Search Results
2. Quantification of nematic cell polarity in three-dimensional tissues.
- Author
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André Scholich, Simon Syga, Hernán Morales-Navarrete, Fabián Segovia-Miranda, Hidenori Nonaka, Kirstin Meyer, Walter de Back, Lutz Brusch, Yannis Kalaidzidis, Marino Zerial, Frank Jülicher, and Benjamin M Friedrich
- Subjects
Biology (General) ,QH301-705.5 - Abstract
How epithelial cells coordinate their polarity to form functional tissues is an open question in cell biology. Here, we characterize a unique type of polarity found in liver tissue, nematic cell polarity, which is different from vectorial cell polarity in simple, sheet-like epithelia. We propose a conceptual and algorithmic framework to characterize complex patterns of polarity proteins on the surface of a cell in terms of a multipole expansion. To rigorously quantify previously observed tissue-level patterns of nematic cell polarity (Morales-Navarrete et al., eLife 2019), we introduce the concept of co-orientational order parameters, which generalize the known biaxial order parameters of the theory of liquid crystals. Applying these concepts to three-dimensional reconstructions of single cells from high-resolution imaging data of mouse liver tissue, we show that the axes of nematic cell polarity of hepatocytes exhibit local coordination and are aligned with the biaxially anisotropic sinusoidal network for blood transport. Our study characterizes liver tissue as a biological example of a biaxial liquid crystal. The general methodology developed here could be applied to other tissues and in-vitro organoids.
- Published
- 2020
- Full Text
- View/download PDF
3. Early embryonic vascular patterning by matrix-mediated paracrine signalling: a mathematical model study.
- Author
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Alvaro Köhn-Luque, Walter de Back, Jörn Starruss, Andrea Mattiotti, Andreas Deutsch, José María Pérez-Pomares, and Miguel A Herrero
- Subjects
Medicine ,Science - Abstract
During embryonic vasculogenesis, endothelial precursor cells of mesodermal origin known as angioblasts assemble into a characteristic network pattern. Although a considerable amount of markers and signals involved in this process have been identified, the mechanisms underlying the coalescence of angioblasts into this reticular pattern remain unclear. Various recent studies hypothesize that autocrine regulation of the chemoattractant vascular endothelial growth factor (VEGF) is responsible for the formation of vascular networks in vitro. However, the autocrine regulation hypothesis does not fit well with reported data on in vivo early vascular development. In this study, we propose a mathematical model based on the alternative assumption that endodermal VEGF signalling activity, having a paracrine effect on adjacent angioblasts, is mediated by its binding to the extracellular matrix (ECM). Detailed morphometric analysis of simulated networks and images obtained from in vivo quail embryos reveals the model mimics the vascular patterns with high accuracy. These results show that paracrine signalling can result in the formation of fine-grained cellular networks when mediated by angioblast-produced ECM. This lends additional support to the theory that patterning during early vascular development in the vertebrate embryo is regulated by paracrine signalling.
- Published
- 2011
- Full Text
- View/download PDF
4. Correction: Quantification of nematic cell polarity in three-dimensional tissues
- Author
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Fabián Segovia-Miranda, Hernán Morales-Navarrete, Frank Jülicher, Marino Zerial, Yannis Kalaidzidis, Benjamin M. Friedrich, Walter de Back, Kirstin Meyer, André Scholich, Simon Syga, Lutz Brusch, and Hidenori Nonaka
- Subjects
Cellular and Molecular Neuroscience ,Materials science ,Computational Theory and Mathematics ,Ecology ,Liquid crystal ,QH301-705.5 ,Modeling and Simulation ,Cell polarity ,Genetics ,Biophysics ,Biology (General) ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics - Abstract
[This corrects the article DOI: 10.1371/journal.pcbi.1008412.].
- Published
- 2021
5. Quantification of nematic cell polarity in three-dimensional tissues
- Author
-
Fabián Segovia-Miranda, Simon Syga, Yannis Kalaidzidis, Hernán Morales-Navarrete, Walter de Back, Marino Zerial, Hidenori Nonaka, Kirstin Meyer, Lutz Brusch, Benjamin M. Friedrich, Frank Jülicher, and André Scholich
- Subjects
0301 basic medicine ,Surface (mathematics) ,Physiology ,Cell Membranes ,Mice ,0302 clinical medicine ,Mathematical and Statistical Techniques ,Liquid crystal ,Animal Cells ,Liver tissue ,Cell polarity ,Medicine and Health Sciences ,Bile ,Biology (General) ,Anisotropy ,Tissues and Organs (q-bio.TO) ,Materials ,Ecology ,Physics ,Cell Polarity ,Condensed Matter Physics ,Living matter ,Body Fluids ,Liquid Crystals ,Order (biology) ,Computational Theory and Mathematics ,Liver ,Biological Physics (physics.bio-ph) ,Modeling and Simulation ,Physical Sciences ,Cellular Types ,Anatomy ,Cellular Structures and Organelles ,Research Article ,Cell Physiology ,Polarity (physics) ,QH301-705.5 ,Materials Science ,Material Properties ,FOS: Physical sciences ,Condensed Matter - Soft Condensed Matter ,Research and Analysis Methods ,Crystals ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,Sine Waves ,Genetics ,Animals ,Physics - Biological Physics ,Molecular Biology ,Cell Shape ,Ecology, Evolution, Behavior and Systematics ,Correction ,Biology and Life Sciences ,Kidneys ,Quantitative Biology - Tissues and Organs ,Cell Biology ,Renal System ,Models, Theoretical ,030104 developmental biology ,FOS: Biological sciences ,Biophysics ,Hepatocytes ,Soft Condensed Matter (cond-mat.soft) ,Multipole expansion ,Mathematical Functions ,030217 neurology & neurosurgery - Abstract
How epithelial cells coordinate their polarity to form functional tissues is an open question in cell biology. Here, we characterize a unique type of polarity found in liver tissue, nematic cell polarity, which is different from vectorial cell polarity in simple, sheet-like epithelia. We propose a conceptual and algorithmic framework to characterize complex patterns of polarity proteins on the surface of a cell in terms of a multipole expansion. To rigorously quantify previously observed tissue-level patterns of nematic cell polarity (Morales-Navarrete et al., eLife 2019), we introduce the concept of co-orientational order parameters, which generalize the known biaxial order parameters of the theory of liquid crystals. Applying these concepts to three-dimensional reconstructions of single cells from high-resolution imaging data of mouse liver tissue, we show that the axes of nematic cell polarity of hepatocytes exhibit local coordination and are aligned with the biaxially anisotropic sinusoidal network for blood transport. Our study characterizes liver tissue as a biological example of a biaxial liquid crystal. The general methodology developed here could be applied to other tissues and in-vitro organoids., Author summary Cell polarity enables cells to carry out specific functions. Cell polarity is characterized by the formation of different plasma membrane domains, each with specific composition of proteins, phospholipids and cytoskeletal components. In simple epithelial sheets, or tube-like tissues such as kidney, epithelial cells are known to display a single apical domain, facing a lumenal cavity, and a single basal domain on the opposite side of the cell, facing a basal layer of extracellular matrix. This apico-basal polarity defines a vector of cell polarity, which provides a direction of fluid transport, e.g., from the basal side of the sheet to the lumen-facing side. In more complex, three-dimensional epithelial tissues, such as liver tissue with its complex network of blood-transporting sinusoids, the membrane domains of hepatocyte cells display more intricate patterns, including rings and antipodal pairs of apical membrane. Here, we develop a mathematical framework to precisely characterize and quantify complex polarity patterns. Thereby, we reveal ordered patterns of cell polarity that span across a liver lobule. Our new method builds on physical concepts originally developed for ordered phases of liquid crystals. It provides a versatile tool to characterize the spatial organization of a complex three-dimensional tissue.
- Published
- 2020
6. Early embryonic vascular patterning by matrix-mediated paracrine signalling: a mathematical model study
- Author
-
Jörn Starruß, Miguel A. Herrero, Alvaro Köhn-Luque, Andreas Deutsch, José M. Pérez-Pomares, Walter de Back, and Andrea Mattiotti
- Subjects
Vascular Endothelial Growth Factor A ,Embryology ,Anatomy and Physiology ,Angioblast ,Cardiovascular ,Mesoderm ,chemistry.chemical_compound ,Endocrinology ,Molecular Cell Biology ,Morphogenesis ,Pattern Formation ,Multidisciplinary ,Applied Mathematics ,Complex Systems ,Cell biology ,Extracellular Matrix ,Vascular endothelial growth factor ,Vascular endothelial growth factor A ,medicine.anatomical_structure ,Medicine ,Cellular Types ,Algorithms ,Protein Binding ,Signal Transduction ,Research Article ,Science ,Paracrine Communication ,Neovascularization, Physiologic ,Endocrine System ,Biology ,Paracrine Mechanisms ,Models, Biological ,Quail ,Paracrine signalling ,Vasculogenesis ,Vascular Biology ,medicine ,Animals ,Computer Simulation ,Autocrine signalling ,Theoretical Biology ,Endocrine Physiology ,Computational Biology ,Endothelial Cells ,chemistry ,Endothelium, Vascular ,Organism Development ,Mathematics ,Developmental Biology - Abstract
During embryonic vasculogenesis, endothelial precursor cells of mesodermal origin known as angioblasts assemble into a characteristic network pattern. Although a considerable amount of markers and signals involved in this process have been identified, the mechanisms underlying the coalescence of angioblasts into this reticular pattern remain unclear. Various recent studies hypothesize that autocrine regulation of the chemoattractant vascular endothelial growth factor (VEGF) is responsible for the formation of vascular networks in vitro. However, the autocrine regulation hypothesis does not fit well with reported data on in vivo early vascular development. In this study, we propose a mathematical model based on the alternative assumption that endodermal VEGF signalling activity, having a paracrine effect on adjacent angioblasts, is mediated by its binding to the extracellular matrix (ECM). Detailed morphometric analysis of simulated networks and images obtained from in vivo quail embryos reveals the model mimics the vascular patterns with high accuracy. These results show that paracrine signalling can result in the formation of fine-grained cellular networks when mediated by angioblast-produced ECM. This lends additional support to the theory that patterning during early vascular development in the vertebrate embryo is regulated by paracrine signalling.
- Published
- 2011
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