193 results on '"Ying C"'
Search Results
2. Item response theory analysis of the Dysfunctional Beliefs and Attitudes about Sleep-16 (DBAS-16) scale in a university student sample
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Louise I. R. Castillo, Thomas Hadjistavropoulos, L. Odell Tan, and Ying C. MacNab
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Multidisciplinary - Abstract
Unhelpful beliefs about sleep have been shown to exacerbate distress associated with sleep-related difficulties. University students are particularly vulnerable to experiencing sleep-related problems. The Dysfunctional Beliefs and Attitudes about Sleep-16 (DBAS-16) scale is a widely used instrument that assesses for sleep-disruptive cognitions. Although psychometric support for the DBAS-16 is available, Item Response Theory (IRT) analysis is needed to examine its properties at the item level. Psychometric investigation in non-clinical samples can help identify people who may be at risk for developing sleep problems. We examined the DBAS-16 using IRT on a sample of 759 university students. Our results identified items and subscales that adequately/inadequately differentiated between students who held unhelpful beliefs about sleep and those who did not. The DBAS-16 is a valuable instrument to assess unhelpful beliefs about sleep. We outline recommendations to improve the discriminatory ability of the instrument. Future investigations should establish cross-validation with a clinical sample.
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- 2023
3. Positive affect during adolescence and health and well-being in adulthood: An outcome-wide longitudinal approach.
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Eric S Kim, Renae Wilkinson, Sakurako S Okuzono, Ying Chen, Koichiro Shiba, Richard G Cowden, and Tyler J VanderWeele
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Medicine - Abstract
BackgroundSeveral intergovernmental organizations, including the World Health Organization and United Nations, are urging countries to use well-being indicators for policymaking. This trend, coupled with increasing recognition that positive affect is beneficial for health/well-being, opens new avenues for intervening on positive affect to improve outcomes. However, it remains unclear if positive affect in adolescence shapes health/well-being in adulthood. We examined if increases in positive affect during adolescence were associated with better health/well-being in adulthood across 41 outcomes.Methods and findingsWe conducted a longitudinal cohort study using data from Add Health-a prospective and nationally representative cohort of community-dwelling U.S. adolescents. Using regression models, we evaluated if increases in positive affect over 1 year (between Wave I; 1994 to 1995 and Wave II; 1995 to 1996) were associated with better health/well-being 11.37 years later (in Wave IV; 2008; N = 11,040) or 20.64 years later (in Wave V; 2016 to 2018; N = 9,003). Participants were aged 15.28 years at study onset, and aged 28.17 or 37.20 years-during the final assessment. Participants with the highest (versus lowest) positive affect had better outcomes on 3 (of 13) physical health outcomes (e.g., higher cognition (β = 0·12, 95% CI = 0·05, 0·19, p = 0.002)), 3 (of 9) health behavior outcomes (e.g., lower physical inactivity (RR = 0·80, CI = 0·66, 0·98, p = 0.029)), 6 (of 7) mental health outcomes (e.g., lower anxiety (RR = 0·81, CI = 0·71, 0·93, p = 0.003)), 2 (of 3) psychological well-being (e.g., higher optimism (β = 0·20, 95% CI = 0·12, 0·28, p < 0.001)), 4 (of 7) social outcomes (e.g., lower loneliness (β = -0·09, 95% CI = -0·16, -0·02, p = 0.015)), and 1 (of 2) civic/prosocial outcomes (e.g., more voting (RR = 1·25, 95% CI = 1·16, 1·36, p < 0.001)). Study limitations include potential unmeasured confounding and reverse causality.ConclusionsEnhanced positive affect during adolescence is linked with a range of improved health/well-being outcomes in adulthood. These findings suggest the promise of testing scalable positive affect interventions and policies to more definitively assess their impact on outcomes.
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- 2024
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4. Association between red cell distribution width and hypertension: Results from NHANES 1999-2018.
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Ying Chen, Xiaoxiao Hou, Jiaxin Zhong, and Kai Liu
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Medicine ,Science - Abstract
The relationship between red cell distribution width (RDW) and hypertension remains a contentious topic, with a lack of large-scale studies focusing on the adults in the United States. This study aimed to investigate the association between RDW and hypertension among US adults from 1999 to 2018.MethodsData were derived from the National Health and Nutrition Examination Survey (NHANES) 1999-2018. RDW values were obtained from the Laboratory Data's Complete Blood Count with 5-part Differential-Whole Blood module. Hypertension data were obtained through hypertension questionnaires and blood pressure measurements. Multivariable weighted logistic regression analyses were conducted to assess the association between RDW and hypertension, followed by subgroup and smooth curve analyses.ResultsCompared to the non-hypertensive group, the hypertensive group exhibited higher RDW values (13.33±1.38 vs. 12.95±1.27, P 0.05).Smooth curve fitting analysis revealed a reverse J-shaped relationship between RDW and hypertension prevalence, with an inflection point at 12.93%.ConclusionWe first explored the relationship between RDW and hypertension among US adults and discovered a reverse J-shaped association, providing further insights into the relationship between blood cell counts and hypertension and offering a new foundation for hypertension prevention and control.
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- 2024
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5. Intelligent supervision of PIVAS drug dispensing based on image recognition technology.
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Jianzhi Deng, Ying Chen, Xiaoyu Zhang, Yuehan Zhou, and Bin Xiong
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Medicine ,Science - Abstract
Pharmacy Intravenous Admixture Services (PIVAS) are places dedicated to the centralized dispensing of intravenous drugs, usually managed and operated by professional pharmacists and pharmacy technicians, and are an integral part of modern healthcare. However, the workflow of PIVAS has some problems, such as low efficiency and error-prone. This study aims to improve the efficiency of drug dispensing, reduce the rate of manual misjudgment, and minimize drug errors by conducting an in-depth study of the entire workflow of PIVAS and applying image recognition technology to the drug checking and dispensing process. Firstly, through experimental comparison, a target detection model suitable for drug category recognition is selected in the drug-checking process of PIVAS, and it is improved to improve the recognition accuracy and speed of intravenous drug categories. Secondly, a corner detection model for drug dosage recognition was studied in the drug dispensing stage to further increase drug dispensing accuracy. Then the PIVAS drug category recognition system and PIVAS drug dosage recognition system were designed and implemented.
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- 2024
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6. Can the combination of antiplatelet or alteplase thrombolytic therapy with argatroban benefit patients suffering from acute stroke? a systematic review, meta-analysis, and meta-regression.
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Haiyan Xie, Ying Chen, Wukun Ge, Xiuping Xu, Chengjiang Liu, Zhiyong Lan, and Yina Yang
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Medicine ,Science - Abstract
BackgroundThe effectiveness of administering argatroban as a treatment approach following antiplatelet therapy or alteplase thrombolytic therapy in patients with acute stroke is presently uncertain. However, it is important to highlight the potential benefits of combining this medication with known thrombolytics or antiplatelet therapy. One notable advantage of argatroban is its short half-life, which helps minimize excessive anticoagulation and risk of bleeding complications in inadvertent cases of hemorrhagic stroke. By conducting a meticulous review and meta-analysis, we aim to further explore the common use of argatroban and examine the plausible advantages of combining this medication with established thrombolytic and antiplatelet therapies.MethodIn this study, we performed a rigorous and methodical search for both randomized controlled trials and retrospective analyses. Our main objective was to analyze the impact of argatroban on the occurrence of hemorrhagic events and the mRS scores of 0-2. We utilized a meta-analysis to assess the relative risk (RR) associated with using argatroban versus not using it.ResultsIn this study, we analyzed data from 11 different studies, encompassing a total of 8,635 patients. Out of these patients, 3999(46.3%) received argatroban treatment while the remaining 4636(53.7%)did not. The primary outcome of 90-day functional independence (modified Rankin scale (mRS) score≤2) showed that the risk ratio (RR) for patients using argatroban after alteplase thrombolytic therapy compared to those not using argatroban was(RR, 1.00 ([95% CI, 0.92-1.09]; P = 0.97), indicating no statistical significance. However, for patients using argatroban after antiplatelet therapy, was (RR,1.09 [95% CI, 1.04-1.14]; P = 0.0001), which was statistically significant. In terms of hemorrhagic events, the RR for patients using argatroban compared to those not using argatroban was (RR,1.08 [95% CI, 0.88-1.33]; P = 0.46), indicating no statistical significance.ConclusionThe results of this study suggest that further research into combination therapy with argatroban and antiplatelet agents may be warranted, however more rigorous RCTs are needed to definitively evaluate the effects of combination treatment.
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- 2024
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7. Notoginsenoside R1 attenuates brain injury in rats with traumatic brain injury: Possible mediation of apoptosis via ERK1/2 signaling pathway
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Xiaoxian Pei, Ling Zhang, Dan Liu, Yajuan Wu, Xiaowei Li, Ying Cao, and Xiangdong Du
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Medicine ,Science - Published
- 2023
8. Performance and microbial community analysis on nitrate removal in a bioelectrochemical reactor.
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Han Li, Ying Cui, Fei Wang, Jinghua Li, Dafu Wu, and Jing Fan
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Medicine ,Science - Abstract
In this experiment, we took reflux sludge, sludge from an aeration tank, and soil from roots as microbial inoculating sources for an electrochemical device for denitrification with high-throughput sequencing on cathodic biofilms. The efficiency of nitrate nitrogen removal using different microbial inoculates varied among voltages. The optimal voltages for denitrification of reflux sludge, aeration tank sludge, and root soil were 0.7V, 0.5V, and 0.5V, respectively. Further analysis revealed that the respective voltages had a significant effect upon microbial growth from the respective inoculates. Proteobacteria and Firmicutes were the main denitrifying microbes. With the addition of low current (produced by the applied voltage), the Chao1, Shannon and Simpson indexes of the diversity of microorganisms in soil inoculation sources increased, indicating that low current can increase the diversity and richness of the microorganisms, while the reflux sludge and aeration tank sludge showed different changes. Low-current stimulation decreased microbial diversity to a certain extent. Pseudomonas showed a trend of decline with increasing applied voltage, in which the MEC (microbial electrolysis cell) of rhizosphere soil as inoculates decreased most significantly from 77.05% to 12.58%, while the MEC of Fusibacter showed a significant increase, and the sludge of reflux sludge, aeration tank and rhizosphere soil increased by 31.12%, 18.7% and 34.6%, respectively. The applied voltage also significantly increased the abundance of Azoarcus in communities from the respective inoculates.
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- 2023
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9. Research on the safety HME-CM approach of cranes in their service life cycle
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Ying Chen and Lianghai Jin
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Medicine ,Science - Abstract
Crane is one of the vital components and lifelines of the construction industry. However, crane accidents happen regularly due to a variety of factors. Among them, the most far-reaching influence is the three factors of the human-machine-environment (HME). Moreover, how to carry out safety management for them is very critical. Considering the barriers to the goal, this study applied configuration management (CM) to HME data change management in cranes’ service life cycle and proposed a HME-CM framework and approach. First, based on the original CM theory, baselines were developed to accommodate changes in HME configuration. Second, we discussed the evolving trajectory of HME configuration and determined the content and updates to the baseline. Third, a marking method based on data provenance theory was proposed to achieve data consistency. Finally, two search procedures were designed to perform the tracking and tracing of HME configuration. This paper contributes to expanding the application of CM theory in crane safety management, ensures the controllability and traceability of crane configuration changes, and provides a new perspective on crane safety.
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- 2023
10. A novel privacy-preserving biometric authentication scheme.
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Xuechun Mao, Ying Chen, Cong Deng, and Xiaqing Zhou
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Medicine ,Science - Abstract
Most existing secure biometric authentication schemes are server-centric, and users must fully trust the server to store, process, and manage their biometric data. As a result, users' biometric data could be leaked by outside attackers or the service provider itself. This paper first constructs the EDZKP protocol based on the inner product, which proves whether the secret value is the Euclidean distance of the secret vectors. Then, combined with the Cuproof protocol, we propose a novel user-centric biometric authentication scheme called BAZKP. In this scheme, all the biometric data remain encrypted during authentication phase, so the server will never see them directly. Meanwhile, the server can determine whether the Euclidean distance of two secret vectors is within a pre-defined threshold by calculation. Security analysis shows BAZKP satisfies completeness, soundness, and zero-knowledge. Based on BAZKP, we propose a privacy-preserving biometric authentication system, and its evaluation demonstrates that it provides reliable and secure authentication.
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- 2023
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11. Effects of typhoon and upwelling on Chlorophyll-a distribution in the northeastern coast of Hainan during Summer.
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Haiyi Shi, Ying Chen, Hui Gao, and Hui Zhao
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Medicine ,Science - Abstract
Typhoons or upwelling are thought to promote higher phytoplankton chlorophyll-a (Chl-a) concentration in many previous studies. However, the combined effects of typhoons and upwelling have been less studied in the South China Sea. Based on satellite remote sensing data, we investigated potential contributions of temperature-characterizing upwelling and typhoon events to Chl-a changes in the Hainan northeast area. Results showed that the Chl-a concentration was 0.80 mg m-3 at the coastal upwelling index (CUI) of 1.7°C in the summer of 2020 when there were no typhoons crossing the area. The CUI (1.01°C) of typhoon-influenced period in 2019 was 0.21°C higher than that of typhoon-free period in 2019. And the Chl-a also increased from 0.70 mg m-3 to 0.99 mg m-3. In comparison, during the typhoon-free period, with the higher CUI, there was the higher concentration of Chl-a. In addition, the typhoon affected Chl-a concentration is significantly higher than that in the other two typhoon-free periods of 2019 and 2020. Though the typhoon has a limited effect on the upwelling intensity, the Chl-a concentration is much higher than when the upwelling acts alone. This is due to the combined effect of typhoon (vertical mixing and runoff) and upwelling. The above results indicate that upwelling dominated the changes in Chl-a concentration in the Hainan northeast upwelling area during the typhoon-free period. In contrast, strong vertical mixing and runoff dominated the changes of Chl-a concentration during the typhoon-influenced period in the above area.
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- 2023
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12. Working from home and subsequent work outcomes: Pre-pandemic evidence.
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Ying Chen, Dorota Weziak-Bialowolska, Matthew T Lee, Piotr Bialowolski, Richard G Cowden, Eileen McNeely, and Tyler J VanderWeele
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Medicine ,Science - Abstract
Frequent working from home (WFH) may stay as a new work norm after the COVID-19 pandemic. Prior observational studies on WFH and work outcomes under non-pandemic circumstances are mostly cross-sectional and often studied employees who worked from home in limited capacity. To provide additional insights that might inform post-pandemic work policies, using longitudinal data collected before the COVID-19 pandemic (June 2018 to July 2019), this study aims to examine the associations between WFH and multiple subsequent work-related outcomes, as well as potential modifiers of these associations, in a sample of employees among whom frequent or even full-time WFH was common (N = 1,123, Meanage = 43.37 years). In linear regression models, each subsequent work outcome (standardized score was used) was regressed on frequencies of WFH, adjusting for baseline values of the outcome variables and other covariates. The results suggested that WFH for 5 days/week versus never WFH was associated with subsequently less work distraction (ß = -0.24, 95% CI = -0.38, -0.11), greater perceived productivity/engagement (ß = 0.23, 95% CI = 0.11, 0.36), and greater job satisfaction (ß = 0.15, 95% CI = 0.02, 0.27), and was associated with subsequent work-family conflicts to a lesser extent (ß = -0.13, 95% CI = -0.26, 0.004). There was also evidence suggesting that long work hours, caregiving responsibilities, and a greater sense of meaningful work can all potentially attenuate the benefits of WFH. As we move towards the post-pandemic era, further research will be needed to understand the impacts of WFH and resources for supporting employees who work from home.
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- 2023
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13. CCT6A knockdown suppresses osteosarcoma cell growth and Akt pathway activation in vitro.
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Weiquan Zeng, Meizhu Wu, Ying Cheng, Liya Liu, Yuying Han, Qiurong Xie, Jiapeng Li, Lihui Wei, Yi Fang, Youqin Chen, Jun Peng, and Aling Shen
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Medicine ,Science - Abstract
We assessed the role of the protein-coding gene chaperonin-containing TCP1 subunit 6A (CCT6A) in osteosarcoma, as this is currently unknown. Using data from the R2 online genomic analysis and visualization application, we found that CCT6A messenger ribonucleic acid (RNA) expression is increased in osteosarcoma tissue and cells. Transfection of CCT6A small interfering RNA into cultured osteosarcoma cells revealed that CCT6A knockdown attenuates cell growth, cell viability, cell survival, and induced apoptosis and cell cycle progression at the G0/G1 phases. Moreover, CCT6A knockdown downregulated phospho-protein kinase B (p-Akt), cyclinD1 and B-cell lymphoma-2, whereas upregulated Bcl-2-associated X-protein expression. Thus, CCT6A knockdown inhibits cell proliferation, induces cell apoptosis, and suppresses the Akt pathway.
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- 2022
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14. Using Sina-Weibo microblogs to inform the development and dissemination of health awareness material about Zika virus transmission, China, 2016-17.
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Qian Hou, Yueqiao Zhao, Xiaoge Su, Rong Rong, Sujian Situ, and Ying Cui
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Medicine ,Science - Abstract
BackgroundOn 1 February 2016, the World Health Organization declared Zika transmission a public health emergency of international concern. Monitoring and responding to community awareness, concern, and possible knowledge gaps are critical during public health emergencies. Here, we describe the review and analysis of micro-blogs posted on Sina-Weibo, China's largest social media platform, to develop and disseminate a Zika virus education campaign.MethodsWe used CYYUN Voice Express' Weibo Spider tool and the search terms of "Zhaika" OR "Zika" OR "Zikv" to capture microblogs about Zika virus retrospectively from February 1 to December 31, 2016 and prospectively from June 1 to November 15, 2017. We described microblogs meeting our inclusion criteria by month and Zika virus outbreaks in Asia and by source (e.g., government agency, individual, or other). We identified common misleading or inaccurate content authored by individual micro-bloggers (i.e., not supported by available scientific evidence) through a qualitative review. We used this information to develop and disseminate health awareness material about the Zika virus through China CDC's 12320 Health Hotline Weibo account. An online survey was conducted to obtain feedback on the material.ResultsWe captured 15,888 microblogs meeting our inclusion criteria. Zika-related microblogs peaked in September 2016, corresponding to news reports about the Zika outbreak in Singapore (August to November 2016). Most microblogs (12,994 [82%]) were authored by individual users, followed by media agencies (842 [5%]), businesses (829 [5%]), international organizations (370 [2%]), and Chinese government agencies (235 [1%]). Relevant microblogs primarily focused on clinical symptoms and health risks, modes of transmission, and actions taken by individuals to prevent infection and seek health care. Incorrect and/or mis-leading information from individual users concentrated on modes of transmission and possible treatments. The microblog "#Zika is that far and this close" health campaign was posted on Sina-Weibo and Baidu (Internet search engine in China) on September 18, 2016. Younger respondents (p-value = 0.01), and those with at least a college education (p-value = 0.03), were more likely than other respondents to consider the online campaign reliable and trustworthy.ConclusionRoutine review of Sina-Weibo and other social media platforms could enhance the ability of public health staff to effectively respond to community concerns and awareness during public health emergencies. Advancements of social media monitoring tools and staff training could help to promote health awareness during emergencies by directly addressing public perceptions and concerns. Various approaches may be needed to reach different at-risk populations, particularly older and less educated populations who may prefer more traditional modes of communication.
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- 2022
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15. Effects of low-light stress on aquacultural water quality and disease resistance in Nile tilapia.
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Bingliang Qu, Hui Zhao, Ying Chen, and Xiangyong Yu
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Medicine ,Science - Abstract
Light intensity has an important environmental influence on the quality and yield of aquatic products. It is essential to understand the effects of light intensity on water quality and fish metabolism before large-scale aquaculture is implemented. In this study, two low-intensity light levels, 0 lx and 100 lx, were used to stress Nile tilapia (Oreochromis niloticus), with a natural light level (500 lx) used as control. The pH, dissolved oxygen and ammonia contents were significantly lower in the water used in the 0 lx and 100 lx groups than in controls, while the levels of nitrite and total phosphorus were apparently higher. Moreover, the numbers of heterotrophic bacteria, Vibrio and total coliforms in aquaculture water were 157.1%, 314.2% and 502.4% higher, respectively, after 0 lx light stress for 15 days. The survival rate of Nile tilapia decreased significantly to 90.6% under 0 lx light on the 15th day. Of the immune-related genes, the expressions of IFN-γ, IL-12 and IL-4 were 390.3%, 757.8% and 387.5% higher under 0 lx light and 303.3%, 471.2% and 289.7% higher under 100 lx light, respectively. These results indicate that low-intensity light changes the physicochemical parameters of aquaculture water and increases the number of bacteria it hosts while decreasing the survival rate and increasing the disease resistance of Nile tilapia.
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- 2022
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16. Rapid, label-free pathogen identification system for multidrug-resistant bacterial wound infection detection on military members in the battlefield.
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Ying Chen, Julie Chau, Jung Yoon, and Jeanne Hladky
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Medicine ,Science - Abstract
US military service members experiencing combat-related wounds have higher risk of infection by multidrug-resistant bacteria. The gold standard culture-based antimicrobial susceptibility testing (AST) is not feasible in the battlefield environment. Thus, a rapid deployable system for bacteria identification and AST directly from wound sample is urgently needed. We report the potential of a Rapid, Label-free Pathogen Identification (RAPID) diagnostic system based on ATR-FTIR method to detect and distinguish multi-drug resistant strains for six different species in the ESKAPEE group. Our RAPID system combines sample processing on-broad to isolate and enrich bacteria cells from wound sample, ATR-FTIR measurement to detect antimicrobial-induced bacterial cell spectral changes, and machine learning model for automated, objective, and quantitative spectral analysis and unknown sample classification. Based on experimental results, our RAPID system is a promising technology for label-free, sensitive (104 cfu/mL from mixture), species-specific (> 95% accuracy), rapid (< 10 min for identification, ~ 4 hours for AST) bacteria detection directly from wound samples.
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- 2022
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17. CHARM: COVID-19 Health Action Response for Marines-Association of antigen-specific interferon-gamma and IL2 responses with asymptomatic and symptomatic infections after a positive qPCR SARS-CoV-2 test.
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Martha Sedegah, Chad Porter, Michael R Hollingdale, Harini Ganeshan, Jun Huang, Carl W Goforth, Maria Belmonte, Arnel Belmonte, Dawn L Weir, Rhonda A Lizewski, Stephen E Lizewski, Stuart C Sealfon, Vihasi Jani, Ying Cheng, Sandra Inoue, Rachael Velasco, Eileen Villasante, Peifang Sun, and Andrew G Letizia
- Subjects
Medicine ,Science - Abstract
SARS-CoV-2 T cell responses are associated with COVID-19 recovery, and Class I- and Class II-restricted epitopes have been identified in the spike (S), nucleocapsid (N) and membrane (M) proteins and others. This prospective COVID-19 Health Action Response for Marines (CHARM) study enabled assessment of T cell responses against S, N and M proteins in symptomatic and asymptomatic SARS-CoV-2 infected participants. At enrollment all participants were negative by qPCR; follow-up occurred biweekly and bimonthly for the next 6 weeks. Study participants who tested positive by qPCR SARS-CoV-2 test were enrolled in an immune response sub-study. FluoroSpot interferon-gamma (IFN-γ) and IL2 responses following qPCR-confirmed infection at enrollment (day 0), day 7 and 14 and more than 28 days later were measured using pools of 17mer peptides covering S, N, and M proteins, or CD4+CD8 peptide pools containing predicted epitopes from multiple SARS-CoV-2 antigens. Among 124 asymptomatic and 105 symptomatic participants, SARS-CoV-2 infection generated IFN-γ responses to the S, N and M proteins that persisted longer in asymptomatic cases. IFN-γ responses were significantly (p = 0.001) more frequent to the N pool (51.4%) than the M pool (18.9%) among asymptomatic but not symptomatic subjects. Asymptomatic IFN-γ responders to the CD4+CD8 pool responded more frequently to the S pool (55.6%) and N pool (57.1%), than the M pool (7.1%), but not symptomatic participants. The frequencies of IFN-γ responses to the S and N+M pools peaked 7 days after the positive qPCR test among asymptomatic (S pool: 22.2%; N+M pool: 28.7%) and symptomatic (S pool: 15.3%; N+M pool 21.9%) participants and dropped by >28 days. Magnitudes of post-infection IFN-γ and IL2 responses to the N+M pool were significantly correlated with IFN-γ and IL2 responses to the N and M pools. These data further support the central role of Th1-biased cell mediated immunity IFN-γ and IL2 responses, particularly to the N protein, in controlling COVID-19 symptoms, and justify T cell-based COVID-19 vaccines that include the N and S proteins.
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- 2022
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18. Should you become a leader in online collaborative learning? Impact of assigned leadership on learning behaviors, outcomes, and perceptions.
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Heng Luo, Xu Han, Ying Chen, and Yanjiao Nie
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Medicine ,Science - Abstract
The growing prevalence of collaborative learning spaces in higher education highlights the importance of student leadership for group learning. Thus, leadership assignment as a common practice in online collaborative learning merits special attention. To investigate the impact of assigned leadership and its key characteristics in promoting team learning in the online context, a semester-long quasi-experiment was conducted with 94 students in a graduate-level blended course. The results revealed significant differences between assigned leaders and group members in certain participating behaviors. However, the impact of assigned leadership on learning outcomes and perceptions was insubstantial. Additionally, student leaders' academic achievement was found to have little impact on group members' learning behaviors and learning outcomes, and mixed results were reported regarding the influence of leader behaviors on group performance. The research findings can inform the crucial decision of leader selection and extend our understanding of leadership in online collaborative learning.
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- 2022
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19. A lightweight deep neural network with higher accuracy.
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Liquan Zhao, Leilei Wang, Yanfei Jia, and Ying Cui
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Medicine ,Science - Abstract
To improve accuracy of the MobileNet network, a new lightweight deep neural network is designed based on the MobileNetV2 network. Firstly, it modifies the network depth of MobileNetV2 to balance the image resolution, network width and depth to keep the gradient stable, which reduces the generation of gradient vanishing or gradient exploding. Secondly, it proposes an improved Bottleneck module by introducing channel attention mechanism. It assigns different weights for different channels according to the degree of relevance between the object features and channels. Therefore, the network can extract more effective features from a complex background. In the end, a new usage strategy of the improved Bottleneck is proposed. It uses the improved Bottleneck module in the second, fourth and fifth stages of MobileNetV2, and uses the original Bottleneck module in other states. Compared with MobileNetV2, MobileNetV3, ShuffleNetV2, GhostNet and HBONetmethods, the proposed method has the highest classification accuracy on the ImageNet-1K dataset, CIFAR-10 and CIFAR-100. Compared with YOLOV4-Lite methods based on these lightweight network networks, YOLOV4-Lite based on our proposed network also has the highest detection accuracy on the PASCAL VOC07+12 dataset.
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- 2022
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20. Schistosome eggs stimulate reactive oxygen species production to enhance M2 macrophage differentiation and promote hepatic pathology in schistosomiasis.
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Yanxiong Yu, Junling Wang, Xiaohong Wang, Pan Gu, Zhigang Lei, Rui Tang, Chuan Wei, Lei Xu, Chun Wang, Ying Chen, Yanan Pu, Xin Qi, Beibei Yu, Xiaojun Chen, Jifeng Zhu, Yalin Li, Zhijie Zhang, Sha Zhou, and Chuan Su
- Subjects
Arctic medicine. Tropical medicine ,RC955-962 ,Public aspects of medicine ,RA1-1270 - Abstract
Schistosomiasis is a neglected tropical disease of public health concern. The most devastating pathology in schistosomiasis japonica and mansoni is mainly attributed to the egg-induced granulomatous response and secondary fibrosis in host liver, which may lead to portal hypertension or even death of the host. Schistosome eggs induce M2 macrophages-rich granulomas and these M2 macrophages play critical roles in the maintenance of granuloma and subsequent fibrosis. Reactive oxygen species (ROS), which are highly produced by stimulated macrophages during infection and necessary for the differentiation of M2 macrophages, are massively distributed around deposited eggs in the liver. However, whether ROS are induced by schistosome eggs to subsequently promote M2 macrophage differentiation, and the possible underlying mechanisms as well, remain to be clarified during S. japonicum infection. Herein, we observed that extensive expression of ROS in the liver of S. japonicum-infected mice. Injection of ROS inhibitor in infected mice resulted in reduced hepatic granulomatous responses and fibrosis. Further investigations revealed that inhibition of ROS production in S. japonicum-infected mice reduces the differentiation of M2, accompanied by increased M1 macrophage differentiation. Finally, we proved that S. japonicum egg antigens (SEA) induce a high level of ROS production via both nicotinamide adenine dinucleotide phosphate (NADPH) oxidase 2 (NOX2) and mitochondria in macrophages. Our study may help to better understand the mechanism of schistosomiasis japonica-induced hepatic pathology and contribute to the development of potential therapeutic strategies by interfering with ROS production.
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- 2021
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21. Erythrocyte adenosine A2B receptor prevents cognitive and auditory dysfunction by promoting hypoxic and metabolic reprogramming.
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Qingfen Qiang, Jeanne M Manalo, Hong Sun, Yujin Zhang, Anren Song, Alexander Q Wen, Y Edward Wen, Changhan Chen, Hong Liu, Ying Cui, Travis Nemkov, Julie A Reisz, George Edwards Iii, Fred A Perreira, Rodney E Kellems, Claudio Soto, Angelo D'Alessandro, and Yang Xia
- Subjects
Biology (General) ,QH301-705.5 - Abstract
Hypoxia drives aging and promotes age-related cognition and hearing functional decline. Despite the role of erythrocytes in oxygen (O2) transport, their role in the onset of aging and age-related cognitive decline and hearing loss (HL) remains undetermined. Recent studies revealed that signaling through the erythrocyte adenosine A2B receptor (ADORA2B) promotes O2 release to counteract hypoxia at high altitude. However, nothing is known about a role for erythrocyte ADORA2B in age-related functional decline. Here, we report that loss of murine erythrocyte-specific ADORA2B (eAdora2b-/-) accelerates early onset of age-related impairments in spatial learning, memory, and hearing ability. eAdora2b-/- mice display the early aging-like cellular and molecular features including the proliferation and activation of microglia and macrophages, elevation of pro-inflammatory cytokines, and attenuation of hypoxia-induced glycolytic gene expression to counteract hypoxia in the hippocampus (HIP), cortex, or cochlea. Hypoxia sufficiently accelerates early onset of cognitive and cochlear functional decline and inflammatory response in eAdora2b-/- mice. Mechanistically, erythrocyte ADORA2B-mediated activation of AMP-activated protein kinase (AMPK) and bisphosphoglycerate mutase (BPGM) promotes hypoxic and metabolic reprogramming to enhance production of 2,3-bisphosphoglycerate (2,3-BPG), an erythrocyte-specific metabolite triggering O2 delivery. Significantly, this finding led us to further discover that murine erythroblast ADORA2B and BPGM mRNA levels and erythrocyte BPGM activity are reduced during normal aging. Overall, we determined that erythrocyte ADORA2B-BPGM axis is a key component for anti-aging and anti-age-related functional decline.
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- 2021
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22. Schistosome infection promotes osteoclast-mediated bone loss.
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Wei Li, Chuan Wei, Lei Xu, Beibei Yu, Ying Chen, Di Lu, Lina Zhang, Xian Song, Liyang Dong, Sha Zhou, Zhipeng Xu, Jifeng Zhu, Xiaojun Chen, and Chuan Su
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Immunologic diseases. Allergy ,RC581-607 ,Biology (General) ,QH301-705.5 - Abstract
Infection with schistosome results in immunological changes that might influence the skeletal system by inducing immunological states affecting bone metabolism. We investigated the relationships between chronic schistosome infection and bone metabolism by using a mouse model of chronic schistosomiasis, affecting millions of humans worldwide. Results showed that schistosome infection resulted in aberrant osteoclast-mediated bone loss, which was accompanied with an increased level of receptor activator of nuclear factor-κB (NF-κB) Ligand (RANKL) and decreased level of osteoprotegerin (OPG). The blockade of RANKL by the anti-RANKL antibody could prevent bone loss in the context of schistosome infection. Meanwhile, both B cells and CD4+ T cells, particularly follicular helper T (Tfh) cell subset, were the important cellular sources of RANKL during schistosome infection. These results highlight the risk of bone loss in schistosome-infected patients and the potential benefit of coupling bone therapy with anti-schistosome treatment.
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- 2021
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23. Spatial distribution of the summer subsurface chlorophyll maximum in the North South China Sea.
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Ying Chen and Hui Zhao
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Medicine ,Science - Abstract
Based on the biological, nutrients and hydrological data in August 2018, the vertical chlorophyll a (Chl-a) concentration profiles and the relationship among surface Chl-a (Chl-a(0)) concentration, maximum Chl-a (Chl-a(m)) concentration and depth-integrated Chl-a (Chl-a(int)) concentration were studied in the Northern South China Sea (NSCS). The results indicate that there are 4 different patterns in the vertical Chl-a profiles in the NSCS: (i) Chl-a increases with depth from the surface (e.g. station 1); (ii) there exists subsurface chlorophyll maximum (SCM), with low Chl-a on the surface and at the bottom layers respectively (e.g. station 5); (iii) there is no SCM, only with high Chl-a on the surface and in the bottom (e.g. station 14); (iv) the 4th pattern is similar to (ii), with the higher Chl-a(0) (e.g. station 28). The SCM is observed at 95% stations in the NSCS and is not detected only at a few stations near the Pearl River (PR) estuary. These patterns are mainly regulated by alternative limitation of nutrients and light from the surface to the bottom of euphotic layer. For the pattern 1 (e.g. station 1), light is not a limited factor, and Chl-a and nutrients increase with depth. The pattern 2 (e.g. station 5) exists with the limitation of surface nutrients in offshore region. The nutrients increases with depth and the nutrients limitation turns to light limitation gradually from surface to bottom. And the SCM appears in the layer which need of the light and nutrients is roughly equivalent. Compared with that the offshore SCM, the nutrients for the pattern 3 (e.g. station 14) are rich on the surface with nutrients concentration and light irradiance. Therefore, it is seawater intrusion from the bottom that brings the higher nutrients concentration. The reason for the high Chl-a(0) on the pattern 4 (e.g. station 28) is terrestrial matter from the nearshore. High correlation (R2 = 0.5206, p
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- 2021
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24. Fibulin-2 expression associates with vascular invasion and patient survival in breast cancer.
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Tor A Klingen, Ying Chen, Hans Aas, Elisabeth Wik, and Lars A Akslen
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Medicine ,Science - Abstract
Stromal elastosis is related to good prognosis in breast cancer and fibulin-2 helps to stabilize elastic fibers in basement membranes. Here, we examined the level of perivascular fibulin-2 expression in relation to elastosis content, vascular invasion, molecular subtypes, tumour detection mode, and patient prognosis in breast cancer. We performed a population based retrospective study of invasive breast cancers from the Norwegian Breast Screening Program (Vestfold County, 2004-2009) including 200 screen-detected and 82 interval cancers. Perivascular fibulin-2 staining was semi-quantitatively graded based on immunohistochemistry (1-3) and dichotomized as high expression (grade 2-3) and low expression (grade 1). Elastosis content was graded on a 4-tiered scale and dichotomized as high (score 3) and low (score 0-2) expression, whereas lymphatic (LVI) and blood vessel invasion (BVI) were recorded as absent or present by immunohistochemistry. High perivascular fibulin-2 expression was strongly related to stromal elastosis (p
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- 2021
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25. Genetic differentiation of geographic populations of Rattus tanezumi based on the mitochondrial Cytb gene.
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Yingying Liu, Lisi Yao, Ying Ci, Xiaomei Cao, Minghui Zhao, Ying Li, and XiaoLong Zhang
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Medicine ,Science - Abstract
Rattus tanezumi is a common domestic rat and host of the bubonic plague pathogen in China and Southeast Asia (SEA). The origin, genetic differentiation and dispersal of R. tanezumi have received increasing attention from researchers. The population genetics of R. tanezumi based on its mitochondrial cytochrome b gene have been studied to explain the origin, relationships and dispersal of populations. In this study, we captured a total of 229 rats; morphological and molecular biological identification cytochrome oxidase subunit I (COI) confirmed 131 R. tanezumi individuals collected from 6 provincial areas, and their Cytb gene sequences were analyzed. The results showed that the population in Mohan (MH), Yunnan, had the highest genetic diversity, while that in Ningde (ND), Fujian, had the lowest. Tajima's D statistic for all populations was negative and nonsignificant, indicating the possible expansion of R. tanezumi populations. Low gene flow occurred between the Zhangmu (ZM) R. tanezumi population and other populations, and the genetic differentiation among them was high. Furthermore, our analyses revealed the ZM lineage was the oldest lineage among the groups and diverged ~1.06 Mya, followed by the Luoyang (LY) lineages (~0.51 Mya) and Yunnan lineage (~0.33 Mya). In southeastern Yunnan, the Jinshuihe (JSH) and MH populations were more closely related to the populations in southeastern China (Fuzhou (FZ), ND, Quanzhou (QZ), Nanchang (NC)) and inland areas (Chongqing (CQ), LY) than to those in other areas of Yunnan (Jiegao (JG) and Qingshuihe (QSH)), indicating that R. tanezumi may have spread from southeastern Yunnan to the interior of China. In summary, R. tanezumi may have originated in ZM and adjacent areas, spread to Yunnan, and then spread from the southeast of Yunnan inland or directly eastward from ZM to inland China.
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- 2021
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26. Assessing population structure and body condition to inform conservation strategies for a small isolated Asian elephant (Elephas maximus) population in southwest China.
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Yakuan Sun, Ying Chen, Juan José Díaz-Sacco, and Kun Shi
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Medicine ,Science - Abstract
The Asian elephant (Elephas maximus) population in Nangunhe National Nature Reserve in China represents a unique evolutionary branch that has been isolated for more than twenty years from neighboring populations in Myanmar. The scarcity of information on population structure, sex ratio, and body condition makes it difficult to develop effective conservation measures for this elephant population. Twelve individuals were identified from 3,860 valid elephant images obtained from February to June 2018 (5,942 sampling effort nights) at 52 camera sites. Three adult females, three adult males, one subadult male, two juvenile females, two juvenile males and one male calf were identified. The ratio of adult females to adult males was 1:1, and the ratio of reproductive ability was 1:0.67, indicating the scarcity of reproductive females as an important limiting factor to population growth. A population density of 5.32 ± 1.56 elephants/100 km2 was estimated using Spatially Explicit Capture Recapture (SECR) models. The health condition of this elephant population was assessed using an 11-point scale of Body Condition Scoring (BCS). The average BCS was 5.75 (n = 12, range 2-9), with adult females scoring lower than adult males. This isolated population is extremely small and has an inverted pyramid age structure and therefore is at a high risk of extinction. We propose three plans to improve the survival of this population: improving the quality and quantity of food resources, removing fencing and establishing corridors between the east and wet parts of Nangunhe reserve.
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- 2021
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27. School types in adolescence and subsequent health and well-being in young adulthood: An outcome-wide analysis
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Ying Chen, Christina Hinton, and Tyler J. VanderWeele
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Medicine ,Science - Abstract
While past empirical studies have explored associations between types of primary and secondary schools and student academic achievement, outcomes beyond academic performance remain less well-understood. Using longitudinal data from a cohort of children (N = 12,288, mean age = 14.56 years) of nurses, this study examined associations between the types of schools participants attended in adolescence and a wide range of subsequent psychological well-being, social engagement, character strengths, mental health, health behavior and physical health outcomes. Results in this sample suggested little difference between attending private independent schools and public schools across outcomes in young adulthood. There were, however, notable differences in subsequent outcomes comparing homeschooling and public schools, and possibly some evidence comparing religious schools and public schools. Specifically, there was some evidence that attending religious schools versus public schools was associated with a higher likelihood of frequent religious service attendance and becoming registered voters, a lower risk of overweight/obese, fewer lifetime sexual partners, and a higher risk of subsequently being binge drinkers; however, these associations were not robust to correction for multiple testing. Homeschooling compared with public schooling was associated with subsequently more frequent volunteering (ß = 0.33, 95% CI = 0.15, 0.52), greater forgiveness (ß = 0.31, 95% CI = 0.16, 0.46), and more frequent religious service attendance (Risk Ratio [RR] = 1.51, 95% CI: 1.27, 1.80), and possibly also with greater purpose in life, less marijuana use, and fewer lifetime sexual partners, but negatively associated with college degree attainment (RR = 0.77, 95% CI: 0.67, 0.88) and possibly with greater risk of posttraumatic stress disorder. These results may encourage education stakeholders to consider a wider range of outcomes beyond academic performance in decision-making.
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- 2021
28. Association of fluid balance with mortality in sepsis is modified by admission hemoglobin levels: A large database study.
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Sandra M Y Tan, Yuan Zhang, Ying Chen, Kay Choong See, and Mengling Feng
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Medicine ,Science - Abstract
PurposeSepsis involves a dysregulated inflammatory response to infection that leads to organ dysfunction. Early fluid resuscitation has been advocated by the Surviving Sepsis Campaign guidelines. However, recent studies have shown that a positive fluid balance is associated with increased mortality in septic patients. We investigated if haemoglobin levels on admission to the intensive care unit (ICU) could modify the association of fluid balance with mortality in patients with sepsis. We hypothesized that with increasing fluid balance, patients with moderate anemia (hemoglobin 7-10g/dL) would have poorer outcomes compared to those without moderate anemia (hemoglobin >10g/dL).Materials and methodsThis retrospective study utilized the Medical Information Mart for Intensive Care-III (MIMIC-III) database. Patients with sepsis, as identified by the International Classification of Diseases, 9th, Clinical Modification codes, were studied. Patients were stratified into those with and without moderate anemia at ICU admission. We investigated the influence of fluid balance measured within 24 hours of ICU admission on 28-day mortality for both patient groups using multivariable logistic regression models. Subgroup and sensitivity analyses were conducted.Results8,132 patients (median age 68.6 years, interquartile range 55.1-79.8 years; 52.8% female) were included. Increasing fluid balance (in L) was associated with a significantly decreased risk of 28-day mortality in patients without moderate anemia (OR 0.91, 95%CI 0.84-0.97, p = 0.005, at 6-hour). Conversely, increasing fluid balance was associated with a significantly increased risk of 28-day mortality in patients with moderate anemia (OR 1.05, 95% CI 1.01-1.1, p = 0.022, at 24-hour). Interaction analyses showed that mortality was highest when haemoglobin decreased in patients with moderate anemia who had the most positive fluid balance. Multiple subgroups and sensitivity analyses yielded consistent results.ConclusionsIn septic patients admitted to ICU, admission hemoglobin levels modified the association between fluid balance and mortality and are an important consideration for future fluid therapy trials.
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- 2021
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29. Longitudinal detection of somatic mutations in saliva and plasma for the surveillance of oral squamous cell carcinomas.
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Ying Cui, Hae-Suk Kim, Eunae Sandra Cho, Dawool Han, Jung Ah Park, Ju Yeong Park, Woong Nam, Hyung Jun Kim, In-Ho Cha, and Yong Hoon Cha
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Medicine ,Science - Abstract
PurposesAlthough clinical and radiological examinations can be used to diagnose oral cancer, and surgical pathology remains the gold standard, these conventional methods have limitations. We evaluated the feasibility of longitudinal next-generation sequencing-based liquid biopsy for oral squamous cell carcinoma surveillance.Materials and methodsEleven patients were enrolled, and plasma and saliva were collected before, and 1, 3, and 6 months after surgery. Tumor-specific mutations were selected using paired, whole-exome analyses of tumor tissues and whole blood. Genes frequently mutated in head and neck cancer were identified using the Cancer Genome Atlas (TCGA) and Catalogue of Somatic Mutations in Cancer (COSMIC) databases to design targeted deep sequencing panels.ResultsIn five of the six patients with recurrent cancer, circulating tumor DNA (ctDNA) was detected earlier with liquid biopsy than with conventional monitoring techniques. Moreover, patients without recurrence exhibited decreased ctDNA allele frequency post-treatment.ConclusionsLongitudinal liquid biopsy of plasma and saliva may be feasible for detecting somatic mutations associated with oral squamous cell carcinomas. It might be attributable to determine early tumor recurrence through genetic analysis of ctDNA.
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- 2021
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30. Driver behaviour and traffic accident involvement among professional heavy semi-trailer truck drivers in China.
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Wanli Han, Jianyou Zhao, and Ying Chang
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Medicine ,Science - Abstract
The purpose of this study was to develop a driving behavior scale for professional drivers of heavy semi-trailer trucks in China, and study the causes of such driving behavior and its impact on traffic safety operation. Data was processed by IBM SPSS 25. In addition to principal component analysis, Promax rotation, Bartlett's test, Cronbach's alpha, correlation analysis and binary logistic regression were examined. A DBQ with 4 dimensions and 20 items, and a PDBQ with 1 dimension and 6 items were developed for professional drivers of heavy semi-trailer trucks in China. The KMO coefficients of PDBQ and DBQ were 0.822 and 0.852, respectively, and the significant level of Bartlett's popularity test was p < 0.0001. The accident prediction model showed that the variables related to traffic accidents were negligence/lapses and driving time of heavy semi-trailer truck drivers. 1-5 a.m. was found to be the most dangerous period for drivers of medium and heavy semi-trailer trucks, during which accidents were most likely to happen. As negligence/lapses increased by one unit, the probability of traffic accidents increased by 2.293 times.
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- 2021
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31. Delay-period activity in frontal, parietal, and occipital cortex tracks noise and biases in visual working memory.
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Qing Yu, Matthew F Panichello, Ying Cai, Bradley R Postle, and Timothy J Buschman
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Biology (General) ,QH301-705.5 - Abstract
Working memory is imprecise, and these imprecisions can be explained by the combined influences of random diffusive error and systematic drift toward a set of stable states ("attractors"). However, the neural correlates of diffusion and drift remain unknown. Here, we investigated how delay-period activity in frontal and parietal cortex, which is known to correlate with the decline in behavioral memory precision observed with increasing memory load, might relate to diffusion and drift. We analyzed data from an existing experiment in which subjects performed delayed recall for line orientation, at different loads, during functional magnetic resonance imaging (fMRI) scanning. To quantify the influence of drift and diffusion, we modeled subjects' behavior using a discrete attractor model and calculated within-subject correlation between frontal and parietal delay-period activity and whole-trial estimates of drift and diffusion. We found that although increases in frontal and parietal activity were associated with increases in both diffusion and drift, diffusion explained the most variance in frontal and parietal delay-period activity. In comparison, a subsequent whole-brain regression analysis showed that drift, rather than diffusion, explained the most variance in delay-period activity in lateral occipital cortex. These results are consistent with a model of the differential recruitment of general frontoparietal mechanisms in response to diffusive noise and of stimulus-specific biases in occipital cortex.
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- 2020
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32. Robust induction of interferon and interferon-stimulated gene expression by influenza B/Yamagata lineage virus infection of A549 cells.
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Pengtao Jiao, Wenhui Fan, Ying Cao, He Zhang, Lu Tian, Lei Sun, Tingrong Luo, Wenjun Liu, and Jing Li
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Medicine ,Science - Abstract
Influenza B virus (IBV) belongs to the Orthomyxoviridae family and generally causes sporadic epidemics but is occasionally deadly to individuals. The current research mainly focuses on clinical and pathological characteristics of IBV. However, to better prevent or treat the disease, one must determine the strategies developed by IBV to invade and disrupt cellular proteins and approach to replicate itself, to suppress antiviral innate immunity, and understand how the host responds to IBV infection. The B/Shanghai/PD114/2018 virus was able to infect alveolar epithelial cells (A549) cells, with good potential for replication. To identify host cellular responses against IBV infection, differentially expressed genes (DEGs) were obtained using RNA sequencing. The GO and KEGG pathway term enrichment analyses with the DEGs were performed, and we found that the DEGs were primary involved in metabolic processes and cellular function, which may be related to the host response, including the innate immune response against the virus. Our transcriptome analysis results demonstrated robust induction of interferon and interferon-stimulated gene expression by IBV in human cells during the early stages of infection, providing a foundation for further studies focused on antiviral drug development and interactions between the virus and host.
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- 2020
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33. Transcriptome sequencing of Coccinella septempunctata adults (Coleoptera: Coccinellidae) feeding on artificial diet and Aphis craccivora.
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Ying Cheng, Junrui Zhi, Fengliang Li, Hua Wang, Yuhang Zhou, and Jianxue Jin
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Medicine ,Science - Abstract
BACKGROUND:The insect predator Coccinella septempunctata can effectively control many types of pests, such as aphids, whiteflies, and small lepidopteran larvae. We previously found that C. septempunctata fed an artificial diet showed diminished biological properties(e.g. fecundity, egg hatching rate, survival rate, etc.) compared with those fed natural prey (Aphis craccivora), likely due to different nutritional characteristics of the diet. In this study, we used transcriptome sequencing analysis to identify nutrition- and metabolism-related genes of C. septempunctata that were differentially expressed depending on diet. METHODOLOGY/PRINCIPAL FINDINGS:The Illumina HiSeq2000 was used to sequence 691,942,058 total clean reads from artificial diet-fed and A. craccivora-fed C. septempunctata libraries, and the clean reads were assembled using Trinity de novo software (Tabel 2). Comparison of transcriptome sequences revealed that expression of 38,315 genes was affected by the artificial diet, and 1,182 of these genes showed a significant change in expression levels (FDR ≤ 0.05,|log2FC|≥1, "FC" stands for "fold change"). These differentially expressed genes (DEGs) were likely associated with the decreased egg laying capacity, hatching rate, longevity, and increased sex ratio (♀:♂) of adult C. septempunctata observed in the group fed the artificial diet. Furthermore, in the most DEGs metabolic pathways for C. septempunctata feeding on the artificial diet accumulated amino acid metabolic pathways, lipid metabolic pathways, and starch and glucose metabolism were down-regulated. CONCLUSIONS/SIGNIFICANCE:We found some differentially expressed genes and metabolic pathways are related to nutrition, from which a more informative feedback for diet formulation was obtained and the artificial diet could be more efficiently optimized.
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- 2020
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34. Time-series transcriptomic analysis reveals novel gene modules that control theanine biosynthesis in tea plant (Camellia sinensis).
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Haisheng Cao, Xiaolong He, Jinke Du, Rui Zhang, Ying Chen, Yong Ma, Qi Chen, Congbing Fang, Chi-Tang Ho, Shihua Zhang, and Xiaochun Wan
- Subjects
Medicine ,Science - Abstract
Theanine (thea) is a unique non-protein amino acid in tea plant (Camellia sinensis) and one of the most important small molecular compounds for tea quality and health effects. The molecular mechanism that maintains thea biosynthesis is not clear but may be reflected in complicated biological networks as other secondary metabolites in plants. We performed an integrative transcriptomic analysis of tea seedlings bud and leave over the time-course of ethylamine (EA) treatment that activated thea pathway. We identified 54 consistent differentially expressed genes (cDEGs, 25 upregulated and 29 downregulated) during thea activation. Gene Ontology (GO) functional enrichment analysis of upregulated genes and downregulated genes showed that they may function as a cascade of biological events during their cooperative contribution to thea biosynthesis. Among the total cDEGs, a diversity of functional genes (e.g., enzymes, transcription factors, transport and binding proteins) were identified, indicating a hierarchy of gene control network underlying thea biosynthesis. A gene network associated with thea biosynthesis was modeled and three interconnected gene functional modules were identified. Among the gene modules, several topologically important genes (e.g., CsBCS-1, CsRP, CsABC2) were experimentally validated using a combined thea content and gene expression analysis. Collectively, we presented here for the first time a comprehensive landscape of the biosynthetic mechanism of thea controlled by a underling gene network, which might provide a theoretical basis for the identification of key genes that contribute to thea biosynthesis.
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- 2020
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35. Correction: Lentivirus-Mediated Knockdown of Astrocyte Elevated Gene-1 Inhibits Growth and Induces Apoptosis through MAPK Pathways in Human Retinoblastoma Cells.
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Ying Chang, Bin Li, Xiaolin Xu, Ling Shen, Haixia Bai, Fei Gao, Zhibao Zhang, and Jost B Jonas
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Medicine ,Science - Abstract
[This corrects the article DOI: 10.1371/journal.pone.0148763.].
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- 2019
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36. Enhanced bonding strength between lithium disilicate ceramics and resin cement by multiple surface treatments after thermal cycling.
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Rui Li, Shi Qing Ma, Cheng Cheng Zang, Wen Yi Zhang, Zi Hao Liu, Ying Chun Sun, and Yi Yu Feng
- Subjects
Medicine ,Science - Abstract
All-ceramic restoration has become a popular technology for dental restoration; however, the relative bond strength between the ceramic and resin limits its further application. Long-term high bond strength, especially after thermal cycling, is of great importance for effective restoration. The effect of physical and/or chemical surface treatments on bonding durability is seldom reported. To overcome this problem, we investigate the bond strength between lithium disilicate ceramics (LDC) and two kinds of resin cements before and after thermal cycling for a variety of surface treatments including hydrofluoric acid, two kinds of silane and a combined effect. The shear bond strength in every group is characterized by universal mechanical testing machine averaged by sixteen-time measurements. The results show that when treated with HF and a mixed silane, the LDC surface shows maximum bonding strengths of 27.1 MPa and 23.3 MPa with two different resin cements after 5000 thermal cycling, respectively, indicating an excellent ability to resist the damage induced by cyclic expansion and contraction. This long-term high bond strength is attributed to the combined effect of micromechanical interlocking (physical bonding) and the formation of Si-O-Si and -C-C- at the interface (chemical bonding). This result offers great potential for enhancing bond strength for all-ceramic restoration by optimizing the surface treatment.
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- 2019
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37. Examining the relation of personality factors to substance use disorder by explanatory item response modeling of DSM-5 symptoms.
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Fu Chen, Hongmei Yang, Okan Bulut, Ying Cui, and Tao Xin
- Subjects
Medicine ,Science - Abstract
This paper explores how personality factors affect substance use disorders (SUDs) using explanatory item response modeling (EIRM). A total of 606 Chinese illicit drug users participated in our study. After removing the cases with missing values on the covariate measures, a final sample of 573 participants was used for data analysis. The Diagnostic and Statistical Manual of Mental Disorders (DSM-5) was used to measure the illicit drug users' SUD level. Four personality factors-anxiety sensitivity, impulsivity, sensation seeking and hopelessness-along with gender and alcohol use were included in EIRM as person covariates. The results indicated that gender, alcohol use, and their interaction significantly predicted the SUD level. The only personality factor that strongly predicted the SUD level was sensation seeking. In addition, the interaction between gender and hopelessness was also found to be a significant predictor of the SUD level, indicating that the negative effect of hopelessness on SUD is stronger for women than for men. The findings suggest that sensation seeking plays an important role in influencing SUDs, and thus, it should be considered when designing intervention or screening procedures for potential illicit drug users. In addition, several DSM-5 SUD symptoms were found to exhibit differential effects by gender, alcohol use, and personality factors. The possible explanations were discussed.
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- 2019
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38. Changes of serum pentraxin-3 and hypersensitive CRP levels during pregnancy and their relationship with gestational diabetes mellitus.
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Ning Yu, Hongyan Cui, Xu Chen, and Ying Chang
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Medicine ,Science - Abstract
OBJECTIVE:To investigate the changes of inflammatory factors pentraxin 3 (PTX3) and hypersensitive C-reactive protein (hs-CRP) during pregnancy and their relationship with gestational diabetes mellitus (GDM). METHODS:The nested case-control study method was used. Eighty non-obese single-pregnant women diagnosed with GDM were included into the case group (GDM, n = 80), together with another eighty pregnant women with normal glucose tolerance were matched in the same period and divided into the control group (CON, n = 80), for detecting multiple biochemical indicators in different pregnancy stages by ELISA. RESULTS:The serum levels of PTX3 and hs-CRP in pregnant women increased with the increase of gestational age (p < 0.001, p < 0.001). The levels of PTX3 and hs-CRP in group GDM were significantly higher in the middle and late pregnancy stages than group CON (p < 0.01, p < 0.05; p < 0.05, p < 0.05). PTX3 was positively correlated with hs-CRP, body mass index (BMI), fasting plasma glucose (FPG), and homeostasis model assessment of insulin resistance (HOMAIR). CONCLUSIONS:PTX3 and hs-CRP may be related to the pathogenesis of GDM, and they are significantly increased in the second trimester, which provides a new idea for early prevention and treatment of GDM and risk prediction of long-term cardiovascular diseases.
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- 2019
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39. A genome-wide association study identifies a susceptibility locus for biliary atresia on 2p16.1 within the gene EFEMP1.
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Ying Chen, Melissa A Gilbert, Christopher M Grochowski, Deborah McEldrew, Jessica Llewellyn, Orith Waisbourd-Zinman, Hakon Hakonarson, Joan E Bailey-Wilson, Pierre Russo, Rebecca G Wells, Kathleen M Loomes, Nancy B Spinner, and Marcella Devoto
- Subjects
Genetics ,QH426-470 - Abstract
Biliary atresia (BA) is a rare pediatric cholangiopathy characterized by fibrosclerosing obliteration of the extrahepatic bile ducts, leading to cholestasis, fibrosis, cirrhosis, and eventual liver failure. The etiology of BA remains unknown, although environmental, inflammatory, infectious, and genetic risk factors have been proposed. We performed a genome-wide association study (GWAS) in a European-American cohort of 343 isolated BA patients and 1716 controls to identify genetic loci associated with BA. A second GWAS was performed in an independent European-American cohort of 156 patients with BA and other extrahepatic anomalies and 212 controls to confirm the identified candidate BA-associated SNPs. Meta-analysis revealed three genome-wide significant BA-associated SNPs on 2p16.1 (rs10865291, rs6761893, and rs727878; P < 5 ×10-8), located within the fifth intron of the EFEMP1 gene, which encodes a secreted extracellular protein implicated in extracellular matrix remodeling, cell proliferation, and organogenesis. RNA expression analysis showed an increase in EFEMP1 transcripts from human liver specimens isolated from patients with either BA or other cholestatic diseases when compared to normal control liver samples. Immunohistochemistry demonstrated that EFEMP1 is expressed in cholangiocytes and vascular smooth muscle cells in liver specimens from patients with BA and other cholestatic diseases, but it is absent from cholangiocytes in normal control liver samples. Efemp1 transcripts had higher expression in cholangiocytes and portal fibroblasts as compared with other cell types in normal rat liver. The identification of a novel BA-associated locus, and implication of EFEMP1 as a new BA candidate susceptibility gene, could provide new insights to understanding the mechanisms underlying this severe pediatric disorder.
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- 2018
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40. Optimism and self-efficacy mediate the association between shyness and subjective well-being among Chinese working adults.
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Conghui Liu, Ying Cheng, Anna S C Hsu, Chuansheng Chen, Jie Liu, and Guoliang Yu
- Subjects
Medicine ,Science - Abstract
The aim of the current study was to investigate whether optimism and self-efficacy mediated the association between shyness and subjective well-being in a sample of Chinese working adults. Two hundred and eight participants completed the Revised Cheek and Buss Shyness Scale, Life Orientation Rest-Revised, Satisfaction with Life Scale, and Positive and Negative Affect Scale. Structural equation modeling results showed that optimism mediated the relationship between shyness and measures of subjective well-being (life satisfaction, positive and negative affect). Self-efficacy mediated the association between shyness and positive subjective well-being (life satisfaction and positive affect). These results suggest that optimism and self-efficacy play unique mediating roles in the relationship between shyness and subjective well-being. They also have important implications for the development of intervention programs aimed at promoting subjective well-being of Chinese working adults through enhancing self-efficacy and optimism.
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- 2018
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41. Comparison of calf muscle architecture between Asian children with spastic cerebral palsy and typically developing peers.
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Ying Chen, Lu He, Kaishou Xu, Jinling Li, Buyun Guan, and Hongmei Tang
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Medicine ,Science - Abstract
To compare the muscle thickness, fascicle length, and pennation angle of the gastrocnemius, soleus, and tibialis anterior between Asian children with spastic cerebral palsy (CP) and typically developing (TD) peers.This cross-sectional study involved a total of 72 children with hemiplegic CP (n = 24), and diplegic CP (n = 24) and their TD peers (n = 24). Muscle architecture was measured at rest using ultrasound. Clinical measures included gross motor function and a modified Ashworth scale.The thicknesses of the tibialis anterior and medial gastrocnemius muscles were smaller in the affected calf of children with CP (p
- Published
- 2018
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42. Visual tracking in high-dimensional particle filter.
- Author
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Jingjing Liu, Ying Chen, Lin Zhou, and Li Zhao
- Subjects
Medicine ,Science - Abstract
In this paper, we propose a novel object tracking algorithm by using high-dimensional particle filter and combined features. Firstly, the refined two-dimensional principal component analysis and the tendency are combined to represent an object. Secondly, we present a framework using high-order Monte Carlo Markov Chain which considers more information and performs more discriminative and efficient on moving objects than the traditional first-order particle filtering. Finally, an advanced sequential importance resampling is applied to estimate the posterior density and obtains the high-quality particles. To further gain the better samples, K-means clustering is used to select more typical particles, which reduces the computational cost. Both qualitative and quantitative evaluations on challenging image sequences demonstrate that the performance of our proposed algorithm is superior to the state-of-the-art methods.
- Published
- 2018
- Full Text
- View/download PDF
43. Development and validation of quality of life instruments for chronic diseases-Chronic gastritis version 2 (QLICD-CG V2.0).
- Author
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Peng Quan, Lei Yu, Zheng Yang, Pingguang Lei, Chonghua Wan, and Ying Chen
- Subjects
Medicine ,Science - Abstract
Quality of life is an important outcome indicator to evaluate whether treatment is successful or not. Chronic gastritis leads to ongoing deterioration of subjectively perceived quality of life. There are several generic measures, but they are not developed particularly to assess chronic gastritis problems. The Quality of Life Instruments for Chronic Diseases-Chronic Gastritis (QLICD-CG V2.0) questionnaire is a 39-item, multi-dimensional, self-report instrument to assess chronic gastritis patients' perception of their health related quality of life in four domains. The instrument was developed in China. The current study aimed to evaluate the psychometric properties of the QLICD-CG V2.0. 194 patients with chronic gastritis were enrolled from 4 hospitals in China. The QLICD-CG V2.0 was administered to patients by trained research assistants. In addition, their demographic characteristics were also recorded. The psychometric testing included construct validity, convergent validity, discriminant validity, test-retest, and responsiveness. The results showed good internal consistency and acceptable floor and ceiling effects (Cronbach's alpha range from 0.80 to 0.93). CFA showed that the instrument structure has a reasonable fitness (RMSEA = 0.063, 95%CI = [0.057 0.079], CFI = 0.93, GFI = 0.95, SRMR = 0.028). The convergent validity was considered appropriate, with 38 of the 39 items correlated stronger with their assigned scale than a competing scale, except for GPS1. Known groups comparisons showed that the QLICD-CG V2.0 discriminated well between subgroups on the basis of gender, marriage status, and economy status, thus providing evidence of discriminative validity. Convergent validity testing revealed that the QLICD-CG V2.0 domain scores correlated significantly with SF-36 dimension scores, which ranged from 0.21 to 0.58. Test-retest coefficients were satisfactory. A majority of intraclass correlation coefficients were above 0.70, except the psychological domain (0.60) and the items of social support/security (0.61). Responsiveness was tested on 157 patients. Significant differences were found on all QLICD-CG V2.0 domains, between baseline responses and after a treatment, except for the items of appetite and sleep. Robust sensitivity to change was observed. The QLICD-CG V2.0 appears to be a valid and reliable instrument to measure QOL in chronic gastritis patients. Scores were reproducible.
- Published
- 2018
- Full Text
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44. Research on maize canopy center recognition based on nonsignificant color difference segmentation.
- Author
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Xiushan Wang, Hehu Zhang, and Ying Chen
- Subjects
Medicine ,Science - Abstract
Weed control is a substantial challenge in field management. A better weed control method at an earlier growth stage is important for increasing yields. As a promising weed control technique, intelligent weeding based on machine vision can avoid the harm of chemical weeding. For machine vision, it is critical to extract and segment crops from their background. However, there is still no optimal solution for object tracking with occlusion under a similar color background. In this study, it was found that the gray distribution of a maize canopy follows the gradient law. Therefore, the recognition method based on the HLS-SVM (HLS color space and Support Vector Machine) and on the grayscale gradient was developed. First, the HLS color space was used to detect the maize canopy. Second, the SVM method was used to segment the central region of the maize canopy. Finally, the maize canopy center was identified according to the gradient law. The results showed that the average segmentation time was 0.49 s, the average segmentation quality was 87.25%, and the standard deviation of the segmentation was 3.57%. The average recognition rate of the center position was 93.33%. This study provided a machine vision method for intelligent weeding agricultural equipment as well as a theoretical reference for further agricultural machine vision research.
- Published
- 2018
- Full Text
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45. Long-term in vitro culture and preliminary establishment of chicken primordial germ cell lines.
- Author
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Linglin Kong, Lingling Qiu, Qixin Guo, Ying Chen, Xin Zhang, Bowen Chen, Yang Zhang, and Guobin Chang
- Subjects
Medicine ,Science - Abstract
Primordial germ cells (PGCs) are precursors of functional gametes and can be used as efficient transgenic tools and carriers in bioreactors. Few methods for long-term culture of PGCs are available. In this study, we tested various culture conditions for PGCs, and used the optimum culture system to culture chicken gonad PGCs for about three hundred days. Long-term-cultured PGCs were detected and characterized by karyotype analysis, immunocytochemical staining of SSEA-1, c-kit, Sox2, cDAZL, and quantitative RT-PCR for specific genes like Tert, DAZL, POUV, and NANOG. Cultured PGCs labeled with PKH26 were reinjected into Stage X recipient embryos and into the dorsal aorta of Stage 14-17 embryos to assay their ability of migration into the germinal crescent and gonads, respectively. In conclusion, the most suitable culture system for PGCs is as follows: feeder layer cells treated with 20 μg/mL mitomycin C for 2 hours, and with 50% conditioned medium added to the factor culture medium. PGCs cultured in this system retain their pluripotency and the unique ability of migration without transformation, indicating the successful preliminary establishment of chicken primordial germ cell lines and these PGCs can be considered for use as carriers in transgenic bioreactors.
- Published
- 2018
- Full Text
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46. Study of helical flow inducers with different thread pitches and diameters in vena cava.
- Author
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Ying Chen, Xiaoyan Deng, Xinying Shan, and Yubin Xing
- Subjects
Medicine ,Science - Abstract
Pulmonary embolism is a severe, potentially life-threatening condition. Inferior vena cava filters have been used to prevent recurrent pulmonary embolisms. However, the build-up of thrombosis in vena cava filters after deployment presents a severe problem to patients. Previous studies proposed that filters with helical flow are beneficial and capable of alleviating this problem. In this study, the hemodynamic performances of four typical helical flow inducers in the vena cava are determined using computational fluid dynamics simulations (steady-state and pulsatile flow) and compared. Pilot in vitro experiments were also conducted. The simulation results demonstrate that large-diameter inducers produce helical flow. Among inducers with identical diameter, those with a smaller thread pitch are more likely to induce increased helical flow. We also observed that the small thread pitch inducers can yield higher shear rates. Furthermore, a large diameter, small thread pitch helical flow inducer increases the time-averaged wall shear stress and reduces the oscillating shear index and relative residence time on the vessel wall in the vicinity of the helical flow inducer. In vitro experiments also verify that large diameter inducers generate a helical flow. A notable observation of this study is that the diameter is the key parameter that affects the induction of a helical flow. This study will likely provide important guidance for the design of interventional treatments and the deployment of filters associated with helical flow in the vena cava.
- Published
- 2018
- Full Text
- View/download PDF
47. Integrated rare variant-based risk gene prioritization in disease case-control sequencing studies.
- Author
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Jhih-Rong Lin, Quanwei Zhang, Ying Cai, Bernice E Morrow, and Zhengdong D Zhang
- Subjects
Genetics ,QH426-470 - Abstract
Rare variants of major effect play an important role in human complex diseases and can be discovered by sequencing-based genome-wide association studies. Here, we introduce an integrated approach that combines the rare variant association test with gene network and phenotype information to identify risk genes implicated by rare variants for human complex diseases. Our data integration method follows a 'discovery-driven' strategy without relying on prior knowledge about the disease and thus maintains the unbiased character of genome-wide association studies. Simulations reveal that our method can outperform a widely-used rare variant association test method by 2 to 3 times. In a case study of a small disease cohort, we uncovered putative risk genes and the corresponding rare variants that may act as genetic modifiers of congenital heart disease in 22q11.2 deletion syndrome patients. These variants were missed by a conventional approach that relied on the rare variant association test alone.
- Published
- 2017
- Full Text
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48. Robust transmission of rate coding in the inhibitory Purkinje cell to cerebellar nuclei pathway in awake mice.
- Author
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Samira Abbasi, Amber E Hudson, Selva K Maran, Ying Cao, Ataollah Abbasi, Detlef H Heck, and Dieter Jaeger
- Subjects
Biology (General) ,QH301-705.5 - Abstract
Neural coding through inhibitory projection pathways remains poorly understood. We analyze the transmission properties of the Purkinje cell (PC) to cerebellar nucleus (CN) pathway in a modeling study using a data set recorded in awake mice containing respiratory rate modulation. We find that inhibitory transmission from tonically active PCs can transmit a behavioral rate code with high fidelity. We parameterized the required population code in PC activity and determined that 20% of PC inputs to a full compartmental CN neuron model need to be rate-comodulated for transmission of a rate code. Rate covariance in PC inputs also accounts for the high coefficient of variation in CN spike trains, while the balance between excitation and inhibition determines spike rate and local spike train variability. Overall, our modeling study can fully account for observed spike train properties of cerebellar output in awake mice, and strongly supports rate coding in the cerebellum.
- Published
- 2017
- Full Text
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49. A method for labeling proteins with tags at the native genomic loci in budding yeast.
- Author
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Qian Wang, Huijun Xue, Siqi Li, Ying Chen, Xuelei Tian, Xin Xu, Wei Xiao, and Yu Vincent Fu
- Subjects
Medicine ,Science - Abstract
Fluorescent proteins and epitope tags are often used as protein fusion tags to study target proteins. One prevailing technique in the budding yeast Saccharomyces cerevisiae is to fuse these tags to a target gene at the precise chromosomal location via homologous recombination. However, several limitations hamper the application of this technique, such as the selectable markers not being reusable, tagging of only the C-terminal being possible, and a "scar" sequence being left in the genome. Here, we describe a strategy to solve these problems by tagging target genes based on a pop-in/pop-out and counter-selection system. Three fluorescent protein tag (mCherry, sfGFP, and mKikGR) and two epitope tag (HA and 3×FLAG) constructs were developed and utilized to tag HHT1, UBC13 or RAD5 at the chromosomal locus as proof-of-concept.
- Published
- 2017
- Full Text
- View/download PDF
50. In vitro enteroid-derived three-dimensional tissue model of human small intestinal epithelium with innate immune responses.
- Author
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Ying Chen, Wenda Zhou, Terrence Roh, Mary K Estes, and David L Kaplan
- Subjects
Medicine ,Science - Abstract
There is a need for functional in vitro 3D human intestine systems that can bridge the gap between conventional cell culture studies and human trials. The successful engineering in vitro of human intestinal tissues relies on the use of the appropriate cell sources, biomimetic scaffolds, and 3D culture conditions to support vital organ functions. We previously established a compartmentalized scaffold consisting of a hollow space within a porous bulk matrix, in which a functional and physiologically relevant intestinal epithelium system was generated using intestinal cell lines. In this study, we adopt the 3D scaffold system for the cultivation of stem cell-derived human small intestinal enteriods (HIEs) to engineer an in vitro 3D model of a nonstransformed human small intestinal epithelium. Characterization of tissue properties revealed a mature HIE-derived epithelium displaying four major terminally differentiated epithelial cell types (enterocytes, Goblet cells, Paneth cells, enteroendocrine cells), with tight junction formation, microvilli polarization, digestive enzyme secretion, and low oxygen tension in the lumen. Moreover, the tissue model demonstrates significant antibacterial responses to E. coli infection, as evidenced by the significant upregulation of genes involved in the innate immune response. Importantly, many of these genes are activated in human patients with inflammatory bowel disease (IBD), implicating the potential application of the 3D stem-cell derived epithelium for the in vitro study of host-microbe-pathogen interplay and IBD pathogenesis.
- Published
- 2017
- Full Text
- View/download PDF
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