1. Small molecule-induced trinucleotide repeat contractions during in vitro DNA synthesis
- Author
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Nursakinah Mohd Zaifuddin, Mizuki Nihei, Masaki Hagihara, Chikara Dohno, Kaoru Saito, and Kazuhiko Nakatani
- Subjects
DNA Replication ,congenital, hereditary, and neonatal diseases and abnormalities ,Quinolones ,Ligands ,010402 general chemistry ,01 natural sciences ,Catalysis ,Primer extension ,03 medical and health sciences ,chemistry.chemical_compound ,Capillary electrophoresis ,Trinucleotide Repeats ,mental disorders ,Materials Chemistry ,medicine ,Humans ,Naphthyridines ,030304 developmental biology ,0303 health sciences ,DNA synthesis ,Metals and Alloys ,Electrophoresis, Capillary ,Triad (anatomy) ,DNA ,General Chemistry ,Ligand (biochemistry) ,Small molecule ,Molecular biology ,nervous system diseases ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,medicine.anatomical_structure ,chemistry ,Ceramics and Composites ,Nucleic Acid Conformation ,Trinucleotide repeat expansion - Abstract
We demonstrated that a synthetic ligand NA, which selectively binds to a 5′-CAG-3′/5′-CAG-3′ triad, induced repeat contractions during DNA polymerase-mediated primer extension through the CAG repeat template. A thorough capillary electrophoresis and sequencing analysis revealed that the d(CAG)20 template gave shortened nascent strands mainly containing 3–6 CTG units in the presence of NA.
- Published
- 2021
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