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Your search keyword '"Capsid protein"' showing total 45 results
Start Over Descriptor "Capsid protein" Publisher springer berlin heidelberg
45 results on '"Capsid protein"'

5. Plant Viral Vectors for Delivery by Agrobacterium

Author

Gleba, Yuri Y., Tusé, Daniel, Giritch, Anatoli, Compans, Richard W, Series editor, Cooper, Max D., Series editor, Gleba, Yuri Y., Series editor, Honjo, Tasuku, Series editor, Melchers, Fritz, Series editor, Oldstone, Michael B. A., Series editor, Vogt, Peter K., Series editor, Malissen, Bernard, Series editor, Aktories, Klaus, Series editor, Kawaoka, Yoshihiro, Series editor, Rappuoli, Rino, Series editor, Galan, Jorge E., Series editor, Palmer, Kenneth, editor, and Gleba, Yuri, editor

Published
2014
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13. Biology and Structure of Plant Satellite Viruses Activated by Icosahedral Helper Viruses

Author

Scholthof, K.-B. G., Jones, R. W., Jackson, A. O., Compans, R. W., editor, Cooper, M., editor, Hogle, J. M., editor, Ito, Y., editor, Koprowski, H., editor, Melchers, F., editor, Oldstone, M., editor, Olsnes, S., editor, Potter, M., editor, Saedler, H., editor, Vogt, P. K., editor, Wagner, H., editor, Vogt, Peter K., editor, and Jackson, Andrew O., editor

Published
1999
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14. Luteovirus-associated Viruses and Subviral RNAs

Author

Falk, B. W., Tian, T., Yeh, H.-H., Compans, R. W., editor, Cooper, M., editor, Hogle, J. M., editor, Ito, Y., editor, Koprowski, H., editor, Melchers, F., editor, Oldstone, M., editor, Olsnes, S., editor, Potter, M., editor, Saedler, H., editor, Vogt, P. K., editor, Wagner, H., editor, Vogt, Peter K., editor, and Jackson, Andrew O., editor

Published
1999
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18. Genetic Divergence Among the Group B Coxsackieviruses

Author

Romero, J. R., Price, C., Dunn, J. J., Compans, R. W., editor, Cooper, M., editor, Hogle, J. M., editor, Koprowski, H., editor, Ito, Y., editor, Melchers, F., editor, Oldstone, M., editor, Olsnes, S., editor, Potter, M., editor, Saedler, H., editor, Vogt, P. K., editor, Wagner, H., editor, Tracy, Steven, editor, Chapman, Nora M., editor, and Mahy, Brian W. J., editor

Published
1997
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19. Genetics of Coxsackievirus Virulence

Author

Chapman, N. M., Ramsingh, A. I., Tracy, S., Compans, R. W., editor, Cooper, M., editor, Hogle, J. M., editor, Koprowski, H., editor, Ito, Y., editor, Melchers, F., editor, Oldstone, M., editor, Olsnes, S., editor, Potter, M., editor, Saedler, H., editor, Vogt, P. K., editor, Wagner, H., editor, Tracy, Steven, editor, Chapman, Nora M., editor, and Mahy, Brian W. J., editor

Published
1997
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26. In-silico study of peptide-protein interaction of antimicrobial peptides potentially targeting SARS and SARS-CoV-2 nucleocapsid protein

Author

Sanika Mohagaonkar, Ritu Bansal, Uzma Khanam, Anamitra Sen, and Bhawna Rathi

Subjects
chemistry.chemical_classification, Pandemic, Stereochemistry, In silico, viruses, Capsid protein, Antimicrobial peptides, fungi, Peptide, Plectasin, Simulation studies, Molecular dynamics, Binding energy, Ligand (biochemistry), Antimicrobial, body regions, chemistry, Capsid, Automotive Engineering, medicine, Favorability percentage, skin and connective tissue diseases, Receptor, medicine.drug, Original Research
Abstract

This study is an attempt to find a suitable therapy using antimicrobial peptides (AMPs) by identifying peptide-protein interaction of AMPs and nucleocapsid protein of SARS and SARS-CoV- 2. The AMPs were shortlisted from the APD3 database (Antimicrobial peptide database) based on various physicochemical parameters. The binding efficacy of AMPs was measured using the lowest energy score of the docked complexes with 10 selected AMPs. For SARS-CoV, AP00180 showed the best pose with a binding affinity value of − 6.4 kcal/mol. Prominent hydrogen bonding interactions were observed between Lys85 (nucleocapsid receptor) and Arg13 (antimicrobial peptide ligand) having the least intermolecular distance of 1.759 Å. For SARS-CoV-2, AP00549 was docked with a binding affinity value of − 3.4 kcal/mol and Arg119 and Glu14 of receptor nucleocapsid protein and ligand AMP having the least intermolecular distance of 2.104 The dynamic simulation was performed at 50 ns to check the stability of the final docked complexes, one with each protein. The two best AMPs were AP00180 (Human Defensin-5) for SARS and AP00549 (Plectasin) for SARS-CoV-2. From positive results of dynamic simulation and previously known knowledge that some AMPs interact with the nucleocapsid of coronaviruses, these AMPs might be used as a potential therapeutic agent for the treatment regime of SARS-CoV-2 and SARS infection. Supplementary Information The online version contains supplementary material available at 10.1007/s40203-021-00103-z.

Published
2021

37. Structure and Assembly of Alphaviruses

Author

Garoff, H., Kondor-Koch, C., Riedel, H., Cooper, M., editor, Henle, W., editor, Hofschneider, P. H., editor, Koprowski, H., editor, Melchers, F., editor, Rott, R., editor, Schweiger, H. G., editor, Vogt, P. K., editor, and Zinkernagel, R., editor

Published
1982
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38. Molecular Biology of the Adeno-Associated Viruses

Author

Berns, Kenneth I., Arber, W., editor, Haas, R., editor, Henle, W., editor, Hofschneider, P. H., editor, Humphrey, J. H., editor, Jerne, N. K., editor, Koldovský, P., editor, Koprowski, H., editor, Maaløe, O., editor, Rott, R., editor, Schweiger, H. G., editor, Sela, M., editor, Syruček, L., editor, Vogt, P. K., editor, and Wecker, E., editor

Published
1974
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39. Structure and Replication of α-Viruses

Author

Kääriäinen, Leevi, Söderlund, Hans, Arber, W., editor, Henle, W., editor, Hofschneider, P. H., editor, Humphrey, J. H., editor, Klein, J., editor, Koldovský, P., editor, Koprowski, H., editor, Maaløe, O., editor, Melchers, F., editor, Rott, R., editor, Schweiger, H. G., editor, Syruček, L., editor, and Vogt, P. K., editor

Published
1978
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45. T-Even Bacteriophages: Structural Organization and Control of Expression of Genes of DNA Metabolism Enzymes

Author

Tanyashin, V. I., Larionov, V. L., Eldarov, M. A., Tziomenko, A. B., Karpychev, I. V., Morzunov, S. P., Tchernov, B. K., Rubtsov, P. M., Kulaev, I. S., Skryabin, K. G., Bayev, A. A., Schmitt, H. D., Wagner, P., Molenaar, C., Brökel, R., Haubruck, H., Gallwitz, D., Efimov, V. A., Buryakova, A. A., Reverdatto, S. V., Chakhamakhcheva, O. G., Ovchinnikov, Yu. A., Saedler, H., Paz-Ares, J., Wienand, U., Schell, J., Broude, N. E., Sverdlov, E. D., Paves, H., Timmusk, T., Metsis, M., Kelve, M., Toots, U., Neuman, T., Saarma, M., Sakmann, B., Korobko, V. G., Graf, T., Beug, H., Golay, J., Leutz, A., Ness, S., Gruss, P., Gren, E., Borisova, G., Kozlovskaya, T., Pushko, P., Tsibinogin, V., Ose, V., Pumpen, P., Tanyashin, V. I., Georgiev, G. P., Shick, V., Belyavsky, A., Postnikov, Yu., Studitsky, V., Sippel, A. E., Theisen, M., Borgmeyer, U., Rupp, R. A. W., Strech-Jurk, U., Stief, A., Müller, A., Hecht, A., Grussenmeyer, T., Zasedatelev, A. S., Gursky, G. V., Grokhovsky, S. L., Gottikh, B. P., Zhuze, A. L., Hörz, W., Mirzabekov, A., Karpov, V., Preobrazhenskaya, O., Bavykin, S., Ebralidse, K., Vlassov, V. V., Zarytova, V. F., Zachau, H. G., Klobeck, H. G., Lötscher, E., Pargent, W., Pohlenz, H. D., Straubinger, B., Zimmer, F. J., Hofschneider, P. H., Wollersheim, M., Zahm, P., Zabarovsky, E. R., Nurbekov, M. K., Turina, O. V., Kisselev, L. L., Riva, M., Schäffner, A. R., Sentenac, A., Hartmann, G. R., Mustaev, A. A., Zaychikov, E. F., Grachev, M. A., Falkenburg, D., Bautz, E. K. F., Grummt, I., Krämer, A., Frendewey, D., Lahr, G., Christofori, G., Frick, M., and Keller, W.

Published
1987
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