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Methane is produced microbially in vast quantities in sediments throughout the world's oceans. However, anaerobic oxidation of methane (AOM) provides a near-quantitative sink for the produced methane and is primarily responsible for preventing methane emissions from the oceans to the atmosphere. AOM is a complex microbial process that involves several different microbial groups and metabolic pathways. The role of different electron acceptors in AOM has been studied for decades, yet large uncertainties remain, especially in terms of understanding the processes in natural settings. This study reports whole-core incubation methane oxidation rates along an estuarine gradient ranging from near fresh water to brackish conditions, and investigates the potential role of different electron acceptors in AOM. Microbial community structure involved in different methane processes is also studied in the same estuarine system using high throughput sequencing tools. Methane oxidation in the sediments was active in three distinct depth layers throughout the studied transect, with total oxidation rates increasing seawards. We find extensive evidence of non-sulphate AOM throughout the transect. The highest absolute AOM rates were observed below the sulphate-methane transition zone (SMTZ), strongly implicating the role of alternative electron acceptors (most likely iron and manganese oxides). However, oxidation rates were ultimately limited by methane availability. ANME-2a/b were the most abundant microbial phyla associated with AOM throughout the study sites, followed by ANME-2d in much lower abundances. Similarly to oxidation rates, highest abundances of microbial groups commonly associated with AOM were found well below the SMTZ, further reinforcing the importance of non-sulphate AOM in this system. [ABSTRACT FROM AUTHOR]

Estuaries are important conduits between terrestrial and marine aquatic systems and function as hot spots in the aquatic methane cycle. Eutrophication and climate change may accelerate methane emissions from estuaries, causing positive feedbacks with global warming. Boreal regions will warm rapidly in the coming decades, increasing the need to understand methane cycling in these systems. In this 3-year study, we investigated seasonal and spatial variability of methane dynamics in a eutrophied boreal estuary, both in the water column and underlying sediments. The estuary and the connected archipelago were consistently a source of methane to the atmosphere, although the origin of emitted methane varied with distance offshore. In the estuary, the river was the primary source of atmospheric methane. In contrast, in the adjacent archipelago, sedimentary methanogenesis fueled by eutrophication over previous decades was the main source. Methane emissions to the atmosphere from the study area were highly variable and dependent on local hydrodynamics and environmental conditions. Despite evidence of highly active methanogenesis in the studied sediments, the vast majority of the upwards diffusive flux of methane was removed before it could escape to the atmosphere, indicating that oxidative filters are presently still functioning regardless of previous eutrophication and ongoing climate change. [ABSTRACT FROM AUTHOR]

Seasonally changing mechanisms affect the concentrations of dissolved inorganic nitrogen and soluble reactive phosphorus, which differ between the stands of different macrophyte life forms and open water in a eutrophic lake. Macrophytes that take nutrients up for their growth also shelter sediments from resuspension that brings nutrients back to the water and affect denitrification, which removes nitrogen from the water ecosystem. In this study the changes in nutrient concentrations were observed during the open-water period from April to November, and also denitrification rates were measured at different phases of the open-water season. The study was conducted at a shallow eutrophic lake where the effect of macrophytes on water quality is remarkable. The concentration changes of different nitrogen forms during the summer were very similar at the open-water and floating-leaved macrophyte ( Nuphar lutea L.) stations. Nitrate was depleted faster among the submerged macrophytes ( Myriophyllum verticillatum L.) than among floating-leaved plants or in open water. The decrease in the concentration of nitrate was so significant during the summer that it also affected the total nitrogen concentration in the water. Denitrification was highest in sediments among floating-leaved macrophytes (average 4.3 mg N m d) and lowest in sediments of submerged plants (average 1.5 mg N m d). Denitrification among submerged macrophytes was limited by low nitrate availability. [ABSTRACT FROM AUTHOR]

Hypoxia has occurred intermittently over the Holocene in the Baltic Sea, but the recent expansion from less than 10 000 km before 1950 to >60 000 km since 2000 is mainly caused by enhanced nutrient inputs from land and atmosphere. With worsening hypoxia, the role of sediments changes from nitrogen removal to nitrogen release as ammonium. At present, denitrification in the water column and sediments is equally important. Phosphorus is currently buried in sediments mainly in organic form, with an additional contribution of reduced Fe-phosphate minerals in the deep anoxic basins. Upon the transition to oxic conditions, a significant proportion of the organic phosphorus will be remineralized, with the phosphorus then being bound to iron oxides. This iron-oxide bound phosphorus is readily released to the water column upon the onset of hypoxia again. Important ecosystems services carried out by the benthic fauna, including biogeochemical feedback-loops and biomass production, are also lost with hypoxia. The results provide quantitative knowledge of nutrient release and recycling processes under various environmental conditions in support of decision support tools underlying the Baltic Sea Action Plan. [ABSTRACT FROM AUTHOR]

The influence of an addition of either sand and/or spring-bloom algae on the efflux of nutrients from intact sediment cores from the Baltic Sea was studied in a flow-through experiment. The addition of sand significantly increased the efflux of silicon (Si) from sediment, but the algal addition did not. The effects on phosphorus (P) were not as clear, and fluxes of nitrogen (NH and NO) remained relatively unaffected by the additions. The small effect of the algal addition was caused by the short time-period covered by the experiment and possibly by adsorption of released Si by the sediment. A follow-up bottle experiment showed that despite the apparently lower content of easily available Si and biogenic silica, BSi, in the sand, the sand-induced Si efflux was caused by release of Si from the sand itself, rather than by indirectly increasing the dissolution of BSi present in the sediment. [ABSTRACT FROM AUTHOR]

Primary production in the eutrophic Baltic Sea is limited by nitrogen availability; hence denitrification (natural transformation of nitrate to gaseous N) in the sediments is crucial in mitigating the effects of eutrophication. This study shows that dissimilatory nitrate reduction to ammonium (DNRA) process, where nitrogen is not removed but instead recycled in the system, dominates nitrate reduction in low oxygen conditions (O <110 μM), which have been persistent in the central Gulf of Finland during the past decade. The nitrogen removal rates measured in this study show that nitrogen removal has decreased in the Gulf of Finland compared to rates measured in mid-1990s and the decrease is most likely caused by the increased bottom water hypoxia. [ABSTRACT FROM AUTHOR]

Benthic processes were measured at a coastal deposition area in the northern Baltic Sea, covering all seasons. The N2 production rates, 90–400 μmol N m−2 d−1, were highest in autumn-early winter and lowest in spring. Heterotrophic bacterial production peaked unexpectedly late in the year, indicating that in addition to the temperature, the availability of carbon compounds suitable for the heterotrophic bacteria also plays a major role in regulating the denitrification rate. Anaerobic ammonium oxidation (anammox) was measured in spring and autumn and contributed 10% and 15%, respectively, to the total N2 production. The low percentage did, however, result in a significant error in the total N2 production rate estimate, calculated using the isotope pairing technique. Anammox must be taken into account in the Gulf of Finland in future sediment nitrogen cycling research. [ABSTRACT FROM AUTHOR]

Estuaries have been suggested to have an important role in reducing the nitrogen load transported to the sea. We measured denitrification rates in six estuaries of the northern Baltic Sea. Four of them were river mouths in the Bothnian Bay (northern Gulf of Bothnia), and two were estuary bays, one in the Archipelago Sea (southern Gulf of Bothnia) and the other in the Gulf of Finland. Denitrification rates in the four river mouths varied between 330 and 905 µmol N m-2 d-1. The estuary bays at the Archipelago Sea and the Gulf of Bothnia had denitrification rates from 90 µmol N m-2 d-1 to 910 µmol N m-2 d-1 and from 230 µmol N m-2 d-1 to 320 µmol N m-2 d-1, respectively. Denitrification removed 3.6-9.0% of the total nitrogen loading in the river mouths and in the estuary bay in the Gulf of Finland, where the residence times were short. In the estuary bay with a long residence time, in the Archipelago Sea, up to 4.5% of nitrate loading and 19% of nitrogen loading were removed before entering the sea. According to our results, the sediments of the fast-flowing rivers and the estuary areas with short residence times have a limited capacity to reduce the nitrogen load to the Baltic Sea. [ABSTRACT FROM AUTHOR]

The community structure of the bacteria associated with Nodularia spumigena (Mertens) cyanobacterial aggregates in the Baltic Sea was studied with temperature gradient gel electrophoresis (TGGE), using a 16S rRNA gene fragment as a target. Various developmental stages of the aggregates and free-floating cyanobacterial filaments were sampled to reveal possible changes in associated microbial community structure during development and senescence of the aggregates. The microbial community structures of all samples differed, and the communities of young and decaying aggregates were separated by cluster analysis of the TGGE fingerprint data. Sequencing of the TGGE fragments indicated the presence of bacteria from the α-, β-, and γ-proteobacterial groups, as well as members of Cytophaga–Flexibacter–Bacteroides lineages and gram-positive Actinobacteria spp. The majority of the Nodularia-associated sequences were not closely related to previously reported 16S rDNA sequences from the Baltic Sea or any other environment. The structure of the bacterial assemblage reflects the environmental changes associated with the succession and decay of the cyanobacterial aggregates. In addition, the sequence data suggest that the N. spumigena (Mertens) blooms in the Baltic Sea may host thus far uncharacterized bacterial species. [ABSTRACT FROM AUTHOR]

The article discovers the profoundness of nitrogen cycling, specifically the significant role of dissolved organic nitrogen (DON) in ocean productivity. It notes the assumption that DON's breakdown in the ocean preserves microbes at the surface. It is observed the contribution of DON to ocean productivity containing low nutrient levels. It suggests future studies to concentrate on bacterial communities as well as their abilities in degrading organic compounds.