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The campo rupestre sensu lato is among the most species-rich vegetation in the world, harbouring a high proportion of endemic species. We aimed to identify the processes that could generate a high level of phylogenetic diversity (PD) in campo rupestre for woody species and point out biodiversity hotspot areas which may provide additional information for conservation planning. We compiled a database of 2049 woody species from 185 community inventories. We calculated the evolutionary history using species richness (SR), PD, mean pairwise phylogenetic distance between species (MPD), the mean nearest taxon distance (MNTD) and their equivalents standardised (ses.PDss, ses.MPD, ses.MNTD), evolutionary distinctiveness (ED), and biogeographically weighted evolutionary distinctiveness (BED). Cloud dwarf-forests had the highest SR, PD, MPD and ses.MPD and lowest MNTD, while rupestrian cerrado presented the highest ses.PD and ses.MNTD. All areas are important for conservation, but the intersections between the hotspots should receive special attention in future conservation actions. The grids identified as hotspots by three or more metrics were localized mainly in Espinhaço Range in Minas Gerais State and a further expansion of protected areas is required. Moreover, the intersections between the hotspots obtained by mean ED and ses.PD are concentrated in the rocky dwarf forest and rupestrian cerrado, with considerable conservation gaps. The degree of protection of campo rupestre was low with unprotected areas comprising 56% of the species. Our results show an urgent need for increasing protected areas of campo rupestre in order to avoid the loss of valuable, endemic species with unique evolutionary history.

The Paraguayan territory and region, in the centre of South America, is a huge transition area with a succession of various vegetation types. However, this area has received little attention from researchers, with few works published on its flora and its delimitations. We aimed to identify the most important environmental driving forces and delimit floristic patterns in this region, since understanding the forces that drive floristic variations in this ecotonal region could help comprehend the distribution of vegetation not only in this region but throughout South America. We obtained 1234 tree species occurrence records, 205 geographic coordinates and 23 environmental variables and altitude from the ‘NeoTropTree’ database and verified the influence and contribution of environmental factors through variance partition. We tested the floristic consistency of the different vegetation types using dendrogram, indicator species and ordination analyses. We also constructed multiple linear models to check the correlation between species distribution and environmental variables. We found eight consistent vegetation types. The spatial variables coupled with environmental variables were more important than individual environmental or spatial variables. Among the environmental variables, the aridity index was the most important. Despite the importance of spatial factors, due to environmental heterogeneity, we found a gradient related to climate and edaphic variables related to tree flora. The results confirm that the Paraguayan territory and region can be considered to be a diversified and important ecotone area in South America with respect to tree flora.

In large-scale biodiversity surveys, the observed species-richness inevitably underestimates the real species richness of a certain geographic region. Nonparametric estimators may be feasible tools for predicting the potential tree/shrub species richness using data from large-scale forest surveys that gather reliable information. In light of the many nonparametric estimators available in the literature, we evaluated their statistical performance (bias and precision) in estimating the γ-diversity of different forest types by comparing their estimates with theoretical total richness values. In addition, we investigated their behaviors on simulated data regarding the spatial distribution of species among sample plots (patchiness). To accomplish these tasks, we used data from a wide-ranging systematic forest survey conducted at 418 sample plots on three subtropical forest types located in a Brazilian hotspot. We established theoretical real tree/shrub species-richness values for each forest type from a vast and carefully revised database for the neotropics. Due to the considerable amount of species with restricted geographic distribution, the incidence-based estimators were shown to be more suitable than the abundance-based estimators for estimating γ-diversity, presenting the smaller overall combination of performance metrics. The abundance-based estimators (Chao1 and ACE) were notedly sensitive to different degrees of patchiness, especially to patchy species distributions. On the other hand, Jackknife1 and the sample-based extrapolation were less influenced by patchiness. Regardless of the differences in species composition and structures among forest types, the Jackknife2 estimator presented the best overall performance and quite accurate estimates for all the cases.

Aims We use dendroecological methods to test the hypothesis that variation in topographic position is related to radial growth and phenology for individuals of the endangered tropical tree Dalbergia nigra under uniform conditions of climate and irradiance, and to examine effects of seasonality on plant phenology and growth periodicity.

The biogeographic history of southern South America has led to a markedly distinct flora within the frame of the Neotropics, which is also particularly heterogeneous in terms of its eco-geographic distribution. This environmental complexity is at the base of the many and controversial classification systems that have been proposed for the vegetation of the so-called Cono Sur region (Paraguay, Chile, Argentina, Uruguay and parts of Brazil and Bolivia). In this study, we aimed to assess the floristic consistency of the main vegetation types that inhabit the region. Our dataset consisted of 116,130 occurrence records of 3662 species of shrubs and trees in 781 sampling sites spread over six countries and eight phytogeographic domains: Atlantic Forest, Pampa, Gran Chaco, Patagonia, Southern Andean, Mediterranean Chile, Temperate Pacific, and Pacific Islands. We performed a cluster analysis and nonmetric multidimensional scaling ordination analysis of this dataset followed by multi-response permutation procedures and permutational multivariate analysis of variance and taxonomic distinction index and indicator species. The greater differentiation took place among the phytogeographic domains and leaf flush regimes (evergreen, deciduous, and semideciduous) though there was also a remarkable latitudinal gradient. Our analyses showed that the pre-defined vegetation types were consistent in terms of woody flora composition and have a considerable number of indicators, many of which endemic. In terms of conservation prioritization, Atlantic Rain Forest therefore has importance because of its high species richness while temperate and mediterranean forests west of the Andes should not be ignored given that they show much higher endemism than would be expected given their species richness.

This study aims to analyse the available distributional data about epiphytic Angiosperms of the Brazilian Atlantic forest (BAF) in order to define geographic distribution patterns, areas of higher species richness and endemism, and locate knowledge gaps regarding the epiphytic flora. Thus, we seek to enhance the knowledge of the biogeography of these species and highlight priority areas for their conservation. Distribution data from literature and collections housed in 51 herbaria were compiled and submitted to analyses of richness (species count per distribution grid), similarity and parsimony analysis of endemicity. The regions of higher richness and endemism, chiefly in Rio de Janeiro and Espirito Santo, overlap with those found for trees and animal groups, while the location of some areas of endemism coincide with the supposed existence of Pleistocene forest refuges in Brazil’s Northeastern and Southeastern regions. The Doce River seems to be responsible for the division of the Angiosperm epiphytic flora into north and south sectors of the BAF. In addition, the existence of a discontinuity named here as ‘Falha de Conde’ (Conde’s Gap) situated in the northern corner of the State of Bahia was highlighted. Such gap divides the north sector of the BAF into two segments. It was also found that the hydrographic basins influence the delimitation of those areas. Subsampling of parts of the range leads to information gaps that need to be addressed by further data collection to ensure an improved understanding of the biogeographic relation between some of the regions, and also to fully clarify their delimitation.

The Brazilian Atlantic Forest has been explored and degraded for more than 500 years (Morellato and Haddad 2000; Ribeiro et al. 2011). The forest fragments that still exist, except in protected areas such as National Reserves and Biological Reserves, are concentrated on the tops of mountains and/or steeper slopes, where agricultural activity is difficult or unfeasible, either for access or due to the generally low soil fertility (Moreno et al. 2003). This biome is, however, recognized as one of the 35 world hotspots for conservation priorities (Myers et al. 2000; Zachos and Habel 2011), and has even been referred as a ‘‘hottest hotspot’’ (Laurance 2009), ‘‘shrinking hotspot’’ (Ribeiro et al. 2011), or ‘‘top hotspot’’ (Eisenlohr et al. 2013). It is for this reason that a special issue is devoted to these forests here. Researchers have responded to this scenario, addressing important floristic and phytogeographic features of the Atlantic Forest vegetation, and producing works revealing major implications for biodiversity conservation (e.g. Oliveira-Filho and Fontes 2000; Marques et al. 2011; Werneck et al. 2011). These studies focused on tree species, the component on which there is far more available data than on most other plant types. However, in recent years, the number of surveys dealing with other growth forms has increased, along with the inclusion of life-forms other than trees in sampling protocols and floristic surveys. Including non-tree life-forms in investigations contributes to our knowledge of the geographic limits and the historical processes acting in the Atlantic Forest, in addition to providing a sounder basis for the development and technical planning of conservation policies.

The semiarid region of Brazil consists of a great variety of landscapes, soils and vegetation forms, with complex interrelations. In order to better understand this interplay, we posed two questions: Are there greater pedological similarities among the different landforms of the same catena or among the same landforms from different catenas? Which soil attributes could be the most important to segregate communities of plants? We sampled soils and vegetation on different landforms in four different catenas and performed NMS (non-metric multidimensional scaling) and ANOVA (analysis of variance) to address the first question; also, we carried another NMS following GLM (general linear model regression) to answer the second question. The first NMS indicated the existence of a fertility gradient, grouping communities in relation to similar landforms, confirmed by ANOVA. The second NMS indicated the same gradient whereas the GLM showed that is controlled by aluminum saturation, sodium saturation, phosphorous and sand content. One extreme of the gradient has uplands associated with cerrado vegetation forms whereas the other extreme slopes were associated with dry forests. The lowlands associated with dry forest represent the central position of the fertility gradient. In general, soils at similar landforms showed greater pedological similarity, and their physico-chemical attributes determined the formation and structure of vegetation. This similarity across the same landform refers to the comparable soil formation at each landform and soil age at landscape scale. The characteristics of the vegetation and soils in the Brazilian southern semiarid region indicated a previously wetter climate, during which deep weathered latosols (oxisols) were formed and remain as relics in the present semiarid.

Altitude is one of the major environmental variables influencing the distribution of tree taxa around the world, and can be a useful parameter for the development of conservation strategies. Our objectives were to obtain an overview of the conservation status of taxa from the Atlantic semideciduous seasonal forests of southeastern Brazil and check, among the floristically consistent altitudinal zones, which had the largest number of endemic, threatened and indicator species. To accomplish this, we used species occurrence and geo-climatic data from the ‘NeoTropTree’ database. First, we checked which zones were floristically consistent using an ordination method (non-metric multidimensional scaling, NMS) followed by an analysis of variance. Then, we conducted an indicator species analysis, estimated species richness, calculated the taxonomic distinctness index for all zones and evaluated important aspects for conservation, such as endemism and threat of extinction. Taxa richness, and number of endemic and threatened species decreased with increasing altitude, while the amount of indicator species for each zone increased with altitudinal elevation. These variations related to the altitudinal gradient should be considered when developing conservation strategies. We also should prioritise the conservation of the entire gradient and, whenever possible, include endemic and endangered species in forest recovery programs.

The use of well-sampled regions and insightful environmental gradients can provide important theoretical knowledge for understanding the drivers of tropical forest patterns and processes, which are necessary for biological conservation. We investigated the variation in tree species composition across a vegetation gradient in the Subtropical Atlantic Forest, as well as various predictors that could impact such patterns. The exploratory and confirmatory analyses included 178 sampling units distributed among 13 different forest types containing binary occurrence records for 935 species from 25,546 trees. Confirmatory analyses were conducted considering spatial autocorrelation, a well-known factor responsible for type I error inflations. The floristic heterogeneity of the study area was revealed by clear patterns of floristic differentiation between vegetation types, as well as by the significant improvements in local models (GWR—geographically weighted regressions) over global models (OLS—ordinary least squares). We found that the observed floristic variation has most likely been driven by humidity from the Atlantic Ocean, low temperature extremes and geographic distance. The latter was revealed by the high contribution of spatial components to the partial models. These results from a shrinking biological hotspot, particularly those concerning the importance of temperature extremes, represent crucial data for identifying conservation priorities, especially considering the seriousness of the temperature shifts predicted by global climate change scenarios.

The loss in forest area due to human occupancy is not the only threat to the remaining biodiversity: forest fragments are susceptible to additional human impact. Our aim was to investigate the effect of human impact on tree community features (species composition and abundance, and structural descriptors) and check if there was a decrease in the number of slender trees, an increase in the amount of large trees, and also a reduction in the number of tree species that occur in 20 fragments of Atlantic montane semideciduous forest in southeastern Brazil. We produced digital maps of each forest fragment using Landsat 7 satellite images and processed the maps to obtain morphometric variables. We used investigative questionnaires and field observations to survey the history of human impact. We then converted the information into scores given to the extent, severity, and duration of each impact, including proportional border area, fire, trails, coppicing, logging, and cattle, and converted these scores into categorical levels. We used linear models to assess the effect of impacts on tree species abundance distribution and stand structural descriptors. Part of the variation in floristic patterns was significantly correlated to the impacts of fire, logging, and proportional border area. Structural descriptors were influenced by cattle and outer roads. Our results provided, for the first time, strong evidence that tree species occurrence and abundance, and forest structure of Atlantic seasonal forest fragments respond differently to various modes of disturbance by humans.

The Atlantic Forest encompasses a high level of biodiversity, endemism and degradation; hence, it is a biome of particular interest for biological conservation. We aimed to investigate the actual geographic distribution of tree species and, among the indicator species of each vegetation type, the conservation status and potential distribution of each species along a vegetation gradient of the Subtropical Atlantic Forest. We analysed the species’ relative constancy to determine their actual distribution, obtained 21 indicator species of the different vegetation types and modelled their potential distribution using the maximum entropy algorithm. The potential distribution models were pooled to yield a single map, which was used to predict the distribution of climatic suitability for these species in South America. Our results showed that the actual geographic distribution is restricted for most species (~72 %). Araucaria angustifolia and Euterpe edulis were categorized as threatened species. The sum of the indicator-species maps showed reduced climatic suitability across most of South America. The southern region of Brazil and the southeastern Brazilian highlands, as well as a few areas of seasonal forests on higher elevations of the Bolivian Chiquitania and Andean Piedmont, exhibited the best climatic suitability. Elevation was the most important variable in our models. Given the concerning level of forest degradation and the presence of endangered and geographic restricted species, our results are a relevant contribution to biodiversity conservation in the Subtropical Atlantic Forest areas, highlighting their floristic and environmental uniqueness and, therefore, the urgent necessity of preserving their biological heritage.

Floods are frequently associated with disturbance in structuring riverine forests and they lead to environmental heterogeneity over space and time. We evaluated the distribution of tree species, ecological groups, species richness and diversity from the point bar to the slope of a riverside forest in southern Brazil (Lat. 30°01′S, Long. 52°47′W) to analyze the effects of flooding on soil properties and forest structure. A plot of 50 × 200 m divided in five contiguous transects of 10 × 200 m parallel to the river was installed, where we measured all the individual trees with pbh ≥ 15 cm. A detailed topographical and soil survey was carried out across the plot and indicated significant differences in organic matter and most mineral nutrients through the topographical gradient. The 1,229 surveyed individuals belonged to 72 species and 35 families. We used Partial CCA and Species Indicator Analysis to observe the spatial distribution of species. Both analyses showed that species distribution was strongly related to the flooding gradient, soil properties and also by space and pure spatial structuring of species and environmental variables (spatial autocorrelation), although a large part of variation remains unexplained. The ecological groups of forest stratification, plant dispersal and requirements for germination indicated slight differences among frequently, occasional and non-flooded transects. Species richness and diversity were higher at intermediate elevations and were associated to the increased spatial–temporal environmental heterogeneity. Across the plot, the direct influence of flooding on tree species distribution created a vegetation zonation that is determined by predicted ecological traits.

The effects of human impact and environmental heterogeneity on the tree species diversity were assessed in 20 fragments of tropical montane seasonal forest in southeastern Brazil. Previous surveys of the tree community, soils and topography of the fragments provided the bulk of the data. The diversity parameters used were the means of species richness, Shannon diversity (H′), and Pielou evenness (J′) obtained from “bootstrap” sub-samplings of 1,000 trees. Morphometric variables obtained for the fragments included total, edge, and inner areas. Investigation forms were used to survey the history of human interventions and prepare an impacts matrix containing scores assigned to assess the extent, severity and duration of selected impacts. Scores for overall environmental impacts were obtained from the ordination scores produced by a multivariate analysis of the impacts matrix. A multivariate analysis of the standard deviations of soil variables was used to identify the variable which contributed most to soil heterogeneity. The same procedure was repeated for the variables related to topography and ground-water regime. The three species diversity parameters were related to the proportions of edges, the overall impacts scores, and the standard deviations of two selected soil and topographic variables. The species diversity in the fragments increased with increasing heterogeneity of both soil chemical properties and topographic features, and decreased with increasing proportion of forest edges. The evenness component of species diversity also increased with increasing severity of overall environmental impacts. This probably occurred because the 20 fragments did not include highly disturbed forests in the range and the intermediate disturbance effect on species diversity was therefore detected.

The relationships among floristic, structural and physiognomic variables of the tree component, flooding regime variations and soil fertility were investigated in a riparian forest fragment (ca. 43 ha) in the Rio Botucarai watershed near the confluence with the Rio Jacui, southern Brazil. All the trees with a dbh ≥ 15 cm were surveyed in 100 contiguous 10 × 10 m plots and soil chemical and textural variables were obtained from the analyses of 15 topsoil samples (0–20 cm depth) collected at different locations. The sample sites encompass all the topographic variation of the area. We used canonical correspondence analysis (CCA) to seek correlations between environmental variables and tree component distribution. The 1,547 surveyed individuals belonged to 30 species and 16 botanical families. The Shannon diversity index (H′) and the Pielou equability (J′) were 1.995 and 0.586 nats ind.−1, respectively. Sebastiania commersoniana, Casearia sylvestris, Eugenia uniflora and Eugenia hyemalis presented the highest importance values. Species’ densities chiefly correlated with site elevation, flooding regime and soil chemical fertility. The analyses of ecological categories (EC) revealed that most species are heliophylous and typical of early successional stages. Richness and diversity (P

The influence of a population of the understorey woody bamboo Merostachys riedeliana and different flooding regimes on tree community dynamics in a section of tropical semideciduous forest in South-Eastern Brazil was examined. A forest section with an area of 1.6 ha composed of 71 adjacent plots was located on a slope ending at the river margin. The section was divided into five topographical sectors according to the mean duration of river floods. In 1991 and 1998 all trees with a diameter at the base of the trunk ≥ 5 cm were measured, identified and tagged, and all live bamboo culms were counted. Annualised estimates of the rates of tree mortality and recruitment, gain and loss of tree basal area, and change in bamboo density were calculated for each of the 71 plots and five topographical sectors as well as for diameter classes and tree species. To segregate patterns arising from spatially autocorrelated events, geostatistical analyses were used prior to statistical comparisons and correlations. In general, mortality rates were not compensated by recruitment rates but there was a net increase in basal area in all sectors, suggesting that the tree community as a whole was in a building phase. Tree community dynamics of the point bar forest (Depression and Levee sectors) differed from that of the upland forest (Ridgetop, Middle Slope and Lower Slope sectors) in the extremely high rates of gain in basal area. The predominant and specialised species, Inga vera and Salix humboldtiana, are probably favoured by relaxed competition in an environment stressed by long-lasting floods. In the upland forest, mortality rates were highest at the Middle Slope, particularly for smaller trees, while recruitment rates were lowest. As bamboo clumps were concentrated in this sector, the locally higher instability in the tree community probably resulted from the direct interference of bamboos. The density of bamboo culms in the upland forest was negatively correlated with the rates of tree recruitment and gain in basal area, and positively correlated with tree mortality rates. Bamboos therefore seemed to restrict the recruitment, growth and survival of trees.

Tree community structure and dynamics of a 5.8 ha fragment of montane semideciduous forest in south-eastern Brazil are described based on two successive surveys of trees with dbh ≥5 cm carried out in 1987 and 1992 in 126 20 × 20 m quadrats. The main purpose was to assess whether the spatial variation of dynamic and structural variables were related to edge-effects and past disturbance regimes. The totals for the two surveys were, respectively, 6528 and 6770 trees, and 94.89 and 108.53 m2 of basal area. The forest fragment was at an aggrading sylvigenetic phase, indicated by an overall net increase in density and basal area, and by a declining proportion of trees of smaller size. The overall annual mortality and recruitment rates were 2.6% and 3.0%, respectively. The dynamic process, however, was strongly affected by spatial heterogeneity. The more severely disturbed sectors had lower average canopy heights and basal areas per hectare, and higher tree densities, proportions of smaller trees, and relative area of canopy gaps. They also had higher mortality and recruitment rates, resulting in higher turnover rates compared to the sectors which suffered only moderate disturbance regimes. Edge sectors were also affected by different past disturbance regimes. However, they stood out by having a particularly high frequency of liana tangles and the highest rates of net increase both in density and basal area. A canonical correspondence analysis indicated that the effects of past disturbance regimes and edges were highly related to the species distribution in the area. Pioneer species were concentrated on the edges and more severely disturbed sectors, shade-tolerant species were particularly more abundant on the moderately disturbed sites, while light-demanding ones were more widely distributed. Tree community structure was also undergoing important changes, with less common species enjoying higher recruitment rates and density increase compared to the more common ones. Shade-tolerant species were increasing in relative abundance and had comparatively lower mortality rates and higher recruitment rates. On the other hand, pioneer species were under retreat, with a decreasing relative abundance, higher mortality rates and lower recruitment rates. Nomenclature: Oliveira-Filho et al. 1994a,d.

Seed predation by howler monkeys is poorly documented. Here we report the seed predation onCariniana estrellensis (Lecythidaceae) fruits by the black howler monkeyAlouatta caraya in south-east Brazil during an intense dry season. This observation suggests that even non-specialized seed predators such as howlers can use seeds in critical periods of dry season.

The interrelationship between river flooding regime, topography, soil properties and the distribution of tree and bamboo species was analysed in an area of tropical semideciduous forest on the margins of the Rio Grande, in Madre de Deus de Minas, Southeastern Brazil. A survey was carried out in a single forest plot (1.597 ha, 71 adjacent 225 m2 quadrats) located in the inner side of a river bend and extending from the point bar to the top of the slope. All trees (≥5 cm diameter at the base of the trunk) and bamboo culms were registered. Soil samples were collected and analysed for their properties and the river level was monitored during a two year period. In the point bar the forest was dominated by only two tree species, Salix humboldtiana and Inga affinis, that tended to occur in distinct areas. Differences in soil properties between these areas suggest variation in sedimentation dynamics. In the sloping part of the plot, a canonical correspondence analysis (CCA) indicated that the floristic composition was significantly correlated with three topographic sectors and their corresponding flood regimes. The Lower Slope corresponds to the sharp transition to the point bar forest, endures partial and annual floods and shows a very distinct flora that includes many light-demanding species. The Middle Slope is only occasionally reached by exceptional river floods and is characterised by a high density of the bamboo Merostachys neesii. The comparatively low density and basal area of trees, particularly for the smaller ones, provide evidence that the bamboos are problably interfering with the trees by restricting their recruitment. The Ridgetop lies entirely above the highest flooding level registered. The density of bamboos is lower and the understorey trees abundant.