97 results on '"Flicek, Paul"'
Search Results
2. GET_PANGENES: calling pangenes from plant genome alignments confirms presence-absence variation
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Contreras-Moreira, Bruno, primary, Saraf, Shradha, additional, Naamati, Guy, additional, Casas, Ana M., additional, Amberkar, Sandeep S., additional, Flicek, Paul, additional, Jones, Andrew R., additional, and Dyer, Sarah, additional
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- 2023
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3. Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision
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Vromman, Marieke, primary, Anckaert, Jasper, additional, Bortoluzzi, Stefania, additional, Buratin, Alessia, additional, Chen, Chia-Ying, additional, Chu, Qinjie, additional, Chuang, Trees-Juen, additional, Dehghannasiri, Roozbeh, additional, Dieterich, Christoph, additional, Dong, Xin, additional, Flicek, Paul, additional, Gaffo, Enrico, additional, Gu, Wanjun, additional, He, Chunjiang, additional, Hoffmann, Steve, additional, Izuogu, Osagie, additional, Jackson, Michael S., additional, Jakobi, Tobias, additional, Lai, Eric C., additional, Nuytens, Justine, additional, Salzman, Julia, additional, Santibanez-Koref, Mauro, additional, Stadler, Peter, additional, Thas, Olivier, additional, Vanden Eynde, Eveline, additional, Verniers, Kimberly, additional, Wen, Guoxia, additional, Westholm, Jakub, additional, Yang, Li, additional, Ye, Chu-Yu, additional, Yigit, Nurten, additional, Yuan, Guo-Hua, additional, Zhang, Jinyang, additional, Zhao, Fangqing, additional, Vandesompele, Jo, additional, and Volders, Pieter-Jan, additional
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- 2023
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4. A draft human pangenome reference
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Liao, Wen-Wei, primary, Asri, Mobin, additional, Ebler, Jana, additional, Doerr, Daniel, additional, Haukness, Marina, additional, Hickey, Glenn, additional, Lu, Shuangjia, additional, Lucas, Julian K., additional, Monlong, Jean, additional, Abel, Haley J., additional, Buonaiuto, Silvia, additional, Chang, Xian H., additional, Cheng, Haoyu, additional, Chu, Justin, additional, Colonna, Vincenza, additional, Eizenga, Jordan M., additional, Feng, Xiaowen, additional, Fischer, Christian, additional, Fulton, Robert S., additional, Garg, Shilpa, additional, Groza, Cristian, additional, Guarracino, Andrea, additional, Harvey, William T., additional, Heumos, Simon, additional, Howe, Kerstin, additional, Jain, Miten, additional, Lu, Tsung-Yu, additional, Markello, Charles, additional, Martin, Fergal J., additional, Mitchell, Matthew W., additional, Munson, Katherine M., additional, Mwaniki, Moses Njagi, additional, Novak, Adam M., additional, Olsen, Hugh E., additional, Pesout, Trevor, additional, Porubsky, David, additional, Prins, Pjotr, additional, Sibbesen, Jonas A., additional, Sirén, Jouni, additional, Tomlinson, Chad, additional, Villani, Flavia, additional, Vollger, Mitchell R., additional, Antonacci-Fulton, Lucinda L., additional, Baid, Gunjan, additional, Baker, Carl A., additional, Belyaeva, Anastasiya, additional, Billis, Konstantinos, additional, Carroll, Andrew, additional, Chang, Pi-Chuan, additional, Cody, Sarah, additional, Cook, Daniel E., additional, Cook-Deegan, Robert M., additional, Cornejo, Omar E., additional, Diekhans, Mark, additional, Ebert, Peter, additional, Fairley, Susan, additional, Fedrigo, Olivier, additional, Felsenfeld, Adam L., additional, Formenti, Giulio, additional, Frankish, Adam, additional, Gao, Yan, additional, Garrison, Nanibaa’ A., additional, Giron, Carlos Garcia, additional, Green, Richard E., additional, Haggerty, Leanne, additional, Hoekzema, Kendra, additional, Hourlier, Thibaut, additional, Ji, Hanlee P., additional, Kenny, Eimear E., additional, Koenig, Barbara A., additional, Kolesnikov, Alexey, additional, Korbel, Jan O., additional, Kordosky, Jennifer, additional, Koren, Sergey, additional, Lee, HoJoon, additional, Lewis, Alexandra P., additional, Magalhães, Hugo, additional, Marco-Sola, Santiago, additional, Marijon, Pierre, additional, McCartney, Ann, additional, McDaniel, Jennifer, additional, Mountcastle, Jacquelyn, additional, Nattestad, Maria, additional, Nurk, Sergey, additional, Olson, Nathan D., additional, Popejoy, Alice B., additional, Puiu, Daniela, additional, Rautiainen, Mikko, additional, Regier, Allison A., additional, Rhie, Arang, additional, Sacco, Samuel, additional, Sanders, Ashley D., additional, Schneider, Valerie A., additional, Schultz, Baergen I., additional, Shafin, Kishwar, additional, Smith, Michael W., additional, Sofia, Heidi J., additional, Abou Tayoun, Ahmad N., additional, Thibaud-Nissen, Françoise, additional, Tricomi, Francesca Floriana, additional, Wagner, Justin, additional, Walenz, Brian, additional, Wood, Jonathan M. D., additional, Zimin, Aleksey V., additional, Bourque, Guillaume, additional, Chaisson, Mark J. P., additional, Flicek, Paul, additional, Phillippy, Adam M., additional, Zook, Justin M., additional, Eichler, Evan E., additional, Haussler, David, additional, Wang, Ting, additional, Jarvis, Erich D., additional, Miga, Karen H., additional, Garrison, Erik, additional, Marschall, Tobias, additional, Hall, Ira M., additional, Li, Heng, additional, and Paten, Benedict, additional
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- 2023
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5. Author Correction: Comparative and demographic analysis of orang-utan genomes
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Locke, Devin P., primary, Hillier, LaDeana W., additional, Warren, Wesley C., additional, Worley, Kim C., additional, Nazareth, Lynne V., additional, Muzny, Donna M., additional, Yang, Shiaw-Pyng, additional, Wang, Zhengyuan, additional, Chinwalla, Asif T., additional, Minx, Pat, additional, Mitreva, Makedonka, additional, Cook, Lisa, additional, Delehaunty, Kim D., additional, Fronick, Catrina, additional, Schmidt, Heather, additional, Fulton, Lucinda A., additional, Fulton, Robert S., additional, Nelson, Joanne O., additional, Magrini, Vincent, additional, Pohl, Craig, additional, Graves, Tina A., additional, Markovic, Chris, additional, Cree, Andy, additional, Dinh, Huyen H., additional, Hume, Jennifer, additional, Kovar, Christie L., additional, Fowler, Gerald R., additional, Lunter, Gerton, additional, Meader, Stephen, additional, Heger, Andreas, additional, Ponting, Chris P., additional, Marques-Bonet, Tomas, additional, Alkan, Can, additional, Chen, Lin, additional, Cheng, Ze, additional, Kidd, Jeffrey M., additional, Eichler, Evan E., additional, White, Simon, additional, Searle, Stephen, additional, Vilella, Albert J., additional, Chen, Yuan, additional, Flicek, Paul, additional, Ma, Jian, additional, Raney, Brian, additional, Suh, Bernard, additional, Burhans, Richard, additional, Herrero, Javier, additional, Haussler, David, additional, Faria, Rui, additional, Fernando, Olga, additional, Darré, Fleur, additional, Farré, Domènec, additional, Gazave, Elodie, additional, Oliva, Meritxell, additional, Navarro, Arcadi, additional, Roberto, Roberta, additional, Capozzi, Oronzo, additional, Archidiacono, Nicoletta, additional, Della Valle, Giuliano, additional, Purgato, Stefania, additional, Rocchi, Mariano, additional, Konkel, Miriam K., additional, Walker, Jerilyn A., additional, Ullmer, Brygg, additional, Batzer, Mark A., additional, Smit, Arian F. A., additional, Hubley, Robert, additional, Casola, Claudio, additional, Schrider, Daniel R., additional, Hahn, Matthew W., additional, Quesada, Victor, additional, Puente, Xose S., additional, Ordoñez, Gonzalo R., additional, López-Otín, Carlos, additional, Vinar, Tomas, additional, Brejova, Brona, additional, Ratan, Aakrosh, additional, Harris, Robert S., additional, Miller, Webb, additional, Kosiol, Carolin, additional, Lawson, Heather A., additional, Taliwal, Vikas, additional, Martins, André L., additional, Siepel, Adam, additional, RoyChoudhury, Arindam, additional, Ma, Xin, additional, Degenhardt, Jeremiah, additional, Bustamante, Carlos D., additional, Gutenkunst, Ryan N., additional, Mailund, Thomas, additional, Dutheil, Julien Y., additional, Hobolth, Asger, additional, Schierup, Mikkel H., additional, Ryder, Oliver A., additional, Yoshinaga, Yuko, additional, de Jong, Pieter J., additional, Weinstock, George M., additional, Rogers, Jeffrey, additional, Mardis, Elaine R., additional, Gibbs, Richard A., additional, and Wilson, Richard K., additional
- Published
- 2022
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6. Standardized annotation of translated open reading frames
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Mudge, Jonathan M., primary, Ruiz-Orera, Jorge, additional, Prensner, John R., additional, Brunet, Marie A., additional, Calvet, Ferriol, additional, Jungreis, Irwin, additional, Gonzalez, Jose Manuel, additional, Magrane, Michele, additional, Martinez, Thomas F., additional, Schulz, Jana Felicitas, additional, Yang, Yucheng T., additional, Albà, M. Mar, additional, Aspden, Julie L., additional, Baranov, Pavel V., additional, Bazzini, Ariel A., additional, Bruford, Elspeth, additional, Martin, Maria Jesus, additional, Calviello, Lorenzo, additional, Carvunis, Anne-Ruxandra, additional, Chen, Jin, additional, Couso, Juan Pablo, additional, Deutsch, Eric W., additional, Flicek, Paul, additional, Frankish, Adam, additional, Gerstein, Mark, additional, Hubner, Norbert, additional, Ingolia, Nicholas T., additional, Kellis, Manolis, additional, Menschaert, Gerben, additional, Moritz, Robert L., additional, Ohler, Uwe, additional, Roucou, Xavier, additional, Saghatelian, Alan, additional, Weissman, Jonathan S., additional, and van Heesch, Sebastiaan, additional
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- 2022
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7. A joint NCBI and EMBL-EBI transcript set for clinical genomics and research
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Morales, Joannella, primary, Pujar, Shashikant, additional, Loveland, Jane E., additional, Astashyn, Alex, additional, Bennett, Ruth, additional, Berry, Andrew, additional, Cox, Eric, additional, Davidson, Claire, additional, Ermolaeva, Olga, additional, Farrell, Catherine M., additional, Fatima, Reham, additional, Gil, Laurent, additional, Goldfarb, Tamara, additional, Gonzalez, Jose M., additional, Haddad, Diana, additional, Hardy, Matthew, additional, Hunt, Toby, additional, Jackson, John, additional, Joardar, Vinita S., additional, Kay, Michael, additional, Kodali, Vamsi K., additional, McGarvey, Kelly M., additional, McMahon, Aoife, additional, Mudge, Jonathan M., additional, Murphy, Daniel N., additional, Murphy, Michael R., additional, Rajput, Bhanu, additional, Rangwala, Sanjida H., additional, Riddick, Lillian D., additional, Thibaud-Nissen, Françoise, additional, Threadgold, Glen, additional, Vatsan, Anjana R., additional, Wallin, Craig, additional, Webb, David, additional, Flicek, Paul, additional, Birney, Ewan, additional, Pruitt, Kim D., additional, Frankish, Adam, additional, Cunningham, Fiona, additional, and Murphy, Terence D., additional
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- 2022
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8. Towards complete and error-free genome assemblies of all vertebrate species
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Rhie, Arang, primary, McCarthy, Shane A., additional, Fedrigo, Olivier, additional, Damas, Joana, additional, Formenti, Giulio, additional, Koren, Sergey, additional, Uliano-Silva, Marcela, additional, Chow, William, additional, Fungtammasan, Arkarachai, additional, Kim, Juwan, additional, Lee, Chul, additional, Ko, Byung June, additional, Chaisson, Mark, additional, Gedman, Gregory L., additional, Cantin, Lindsey J., additional, Thibaud-Nissen, Francoise, additional, Haggerty, Leanne, additional, Bista, Iliana, additional, Smith, Michelle, additional, Haase, Bettina, additional, Mountcastle, Jacquelyn, additional, Winkler, Sylke, additional, Paez, Sadye, additional, Howard, Jason, additional, Vernes, Sonja C., additional, Lama, Tanya M., additional, Grutzner, Frank, additional, Warren, Wesley C., additional, Balakrishnan, Christopher N., additional, Burt, Dave, additional, George, Julia M., additional, Biegler, Matthew T., additional, Iorns, David, additional, Digby, Andrew, additional, Eason, Daryl, additional, Robertson, Bruce, additional, Edwards, Taylor, additional, Wilkinson, Mark, additional, Turner, George, additional, Meyer, Axel, additional, Kautt, Andreas F., additional, Franchini, Paolo, additional, Detrich, H. William, additional, Svardal, Hannes, additional, Wagner, Maximilian, additional, Naylor, Gavin J. P., additional, Pippel, Martin, additional, Malinsky, Milan, additional, Mooney, Mark, additional, Simbirsky, Maria, additional, Hannigan, Brett T., additional, Pesout, Trevor, additional, Houck, Marlys, additional, Misuraca, Ann, additional, Kingan, Sarah B., additional, Hall, Richard, additional, Kronenberg, Zev, additional, Sović, Ivan, additional, Dunn, Christopher, additional, Ning, Zemin, additional, Hastie, Alex, additional, Lee, Joyce, additional, Selvaraj, Siddarth, additional, Green, Richard E., additional, Putnam, Nicholas H., additional, Gut, Ivo, additional, Ghurye, Jay, additional, Garrison, Erik, additional, Sims, Ying, additional, Collins, Joanna, additional, Pelan, Sarah, additional, Torrance, James, additional, Tracey, Alan, additional, Wood, Jonathan, additional, Dagnew, Robel E., additional, Guan, Dengfeng, additional, London, Sarah E., additional, Clayton, David F., additional, Mello, Claudio V., additional, Friedrich, Samantha R., additional, Lovell, Peter V., additional, Osipova, Ekaterina, additional, Al-Ajli, Farooq O., additional, Secomandi, Simona, additional, Kim, Heebal, additional, Theofanopoulou, Constantina, additional, Hiller, Michael, additional, Zhou, Yang, additional, Harris, Robert S., additional, Makova, Kateryna D., additional, Medvedev, Paul, additional, Hoffman, Jinna, additional, Masterson, Patrick, additional, Clark, Karen, additional, Martin, Fergal, additional, Howe, Kevin, additional, Flicek, Paul, additional, Walenz, Brian P., additional, Kwak, Woori, additional, Clawson, Hiram, additional, Diekhans, Mark, additional, Nassar, Luis, additional, Paten, Benedict, additional, Kraus, Robert H. S., additional, Crawford, Andrew J., additional, Gilbert, M. Thomas P., additional, Zhang, Guojie, additional, Venkatesh, Byrappa, additional, Murphy, Robert W., additional, Koepfli, Klaus-Peter, additional, Shapiro, Beth, additional, Johnson, Warren E., additional, Di Palma, Federica, additional, Marques-Bonet, Tomas, additional, Teeling, Emma C., additional, Warnow, Tandy, additional, Graves, Jennifer Marshall, additional, Ryder, Oliver A., additional, Haussler, David, additional, O’Brien, Stephen J., additional, Korlach, Jonas, additional, Lewin, Harris A., additional, Howe, Kerstin, additional, Myers, Eugene W., additional, Durbin, Richard, additional, Phillippy, Adam M., additional, and Jarvis, Erich D., additional
- Published
- 2021
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9. Genetic perturbation of PU.1 binding and chromatin looping at neutrophil enhancers associates with autoimmune disease
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Watt, Stephen, primary, Vasquez, Louella, additional, Walter, Klaudia, additional, Mann, Alice L., additional, Kundu, Kousik, additional, Chen, Lu, additional, Sims, Ying, additional, Ecker, Simone, additional, Burden, Frances, additional, Farrow, Samantha, additional, Farr, Ben, additional, Iotchkova, Valentina, additional, Elding, Heather, additional, Mead, Daniel, additional, Tardaguila, Manuel, additional, Ponstingl, Hannes, additional, Richardson, David, additional, Datta, Avik, additional, Flicek, Paul, additional, Clarke, Laura, additional, Downes, Kate, additional, Pastinen, Tomi, additional, Fraser, Peter, additional, Frontini, Mattia, additional, Javierre, Biola-Maria, additional, Spivakov, Mikhail, additional, and Soranzo, Nicole, additional
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- 2021
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10. Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research
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Kern, Colin, primary, Wang, Ying, additional, Xu, Xiaoqin, additional, Pan, Zhangyuan, additional, Halstead, Michelle, additional, Chanthavixay, Ganrea, additional, Saelao, Perot, additional, Waters, Susan, additional, Xiang, Ruidong, additional, Chamberlain, Amanda, additional, Korf, Ian, additional, Delany, Mary E., additional, Cheng, Hans H., additional, Medrano, Juan F., additional, Van Eenennaam, Alison L., additional, Tuggle, Chris K., additional, Ernst, Catherine, additional, Flicek, Paul, additional, Quon, Gerald, additional, Ross, Pablo, additional, and Zhou, Huaijun, additional
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- 2021
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11. LINE retrotransposons characterize mammalian tissue-specific and evolutionarily dynamic regulatory regions
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Roller, Maša, primary, Stamper, Ericca, additional, Villar, Diego, additional, Izuogu, Osagie, additional, Martin, Fergal, additional, Redmond, Aisling M., additional, Ramachanderan, Raghavendra, additional, Harewood, Louise, additional, Odom, Duncan T., additional, and Flicek, Paul, additional
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- 2021
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12. A spatially resolved brain region- and cell type-specific isoform atlas of the postnatal mouse brain
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Joglekar, Anoushka, primary, Prjibelski, Andrey, additional, Mahfouz, Ahmed, additional, Collier, Paul, additional, Lin, Susan, additional, Schlusche, Anna Katharina, additional, Marrocco, Jordan, additional, Williams, Stephen R., additional, Haase, Bettina, additional, Hayes, Ashley, additional, Chew, Jennifer G., additional, Weisenfeld, Neil I., additional, Wong, Man Ying, additional, Stein, Alexander N., additional, Hardwick, Simon A., additional, Hunt, Toby, additional, Wang, Qi, additional, Dieterich, Christoph, additional, Bent, Zachary, additional, Fedrigo, Olivier, additional, Sloan, Steven A., additional, Risso, Davide, additional, Jarvis, Erich D., additional, Flicek, Paul, additional, Luo, Wenjie, additional, Pitt, Geoffrey S., additional, Frankish, Adam, additional, Smit, August B., additional, Ross, M. Elizabeth, additional, and Tilgner, Hagen U., additional
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- 2021
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13. Functional signatures of evolutionarily young CTCF binding sites
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Azazi, Dhoyazan, primary, Mudge, Jonathan M., additional, Odom, Duncan T., additional, and Flicek, Paul, additional
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- 2020
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14. Transcriptional activity and strain-specific history of mouse pseudogenes
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Sisu, Cristina, primary, Muir, Paul, additional, Frankish, Adam, additional, Fiddes, Ian, additional, Diekhans, Mark, additional, Thybert, David, additional, Odom, Duncan T., additional, Flicek, Paul, additional, Keane, Thomas M., additional, Hubbard, Tim, additional, Harrow, Jennifer, additional, and Gerstein, Mark, additional
- Published
- 2020
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15. The Deep Genome Project
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Lloyd, K. C. Kent, primary, Adams, David J., additional, Baynam, Gareth, additional, Beaudet, Arthur L., additional, Bosch, Fatima, additional, Boycott, Kym M., additional, Braun, Robert E., additional, Caulfield, Mark, additional, Cohn, Ronald, additional, Dickinson, Mary E., additional, Dobbie, Michael S., additional, Flenniken, Ann M., additional, Flicek, Paul, additional, Galande, Sanjeev, additional, Gao, Xiang, additional, Grobler, Anne, additional, Heaney, Jason D., additional, Herault, Yann, additional, de Angelis, Martin Hrabě, additional, Lupski, James R., additional, Lyonnet, Stanislas, additional, Mallon, Ann-Marie, additional, Mammano, Fabio, additional, MacRae, Calum A., additional, McInnes, Roderick, additional, McKerlie, Colin, additional, Meehan, Terrence F., additional, Murray, Stephen A., additional, Nutter, Lauryl M. J., additional, Obata, Yuichi, additional, Parkinson, Helen, additional, Pepper, Michael S., additional, Sedlacek, Radislav, additional, Seong, Je Kyung, additional, Shiroishi, Toshihiko, additional, Smedley, Damian, additional, Tocchini-Valentini, Glauco, additional, Valle, David, additional, Wang, Chi-Kuang Leo, additional, Wells, Sara, additional, White, Jacqueline, additional, Wurst, Wolfgang, additional, Xu, Ying, additional, and Brown, Steve D. M., additional
- Published
- 2020
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16. Clustered CTCF binding is an evolutionary mechanism to maintain topologically associating domains
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Kentepozidou, Elissavet, primary, Aitken, Sarah J., additional, Feig, Christine, additional, Stefflova, Klara, additional, Ibarra-Soria, Ximena, additional, Odom, Duncan T., additional, Roller, Maša, additional, and Flicek, Paul, additional
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- 2020
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17. Re-annotation of 191 developmental and epileptic encephalopathy-associated genes unmasks de novo variants in SCN1A
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Steward, Charles A., primary, Roovers, Jolien, additional, Suner, Marie-Marthe, additional, Gonzalez, Jose M., additional, Uszczynska-Ratajczak, Barbara, additional, Pervouchine, Dmitri, additional, Fitzgerald, Stephen, additional, Viola, Margarida, additional, Stamberger, Hannah, additional, Hamdan, Fadi F., additional, Ceulemans, Berten, additional, Leroy, Patricia, additional, Nava, Caroline, additional, Lepine, Anne, additional, Tapanari, Electra, additional, Keiller, Don, additional, Abbs, Stephen, additional, Sanchis-Juan, Alba, additional, Grozeva, Detelina, additional, Rogers, Anthony S., additional, Diekhans, Mark, additional, Guigó, Roderic, additional, Petryszak, Robert, additional, Minassian, Berge A., additional, Cavalleri, Gianpiero, additional, Vitsios, Dimitrios, additional, Petrovski, Slavé, additional, Harrow, Jennifer, additional, Flicek, Paul, additional, Lucy Raymond, F., additional, Lench, Nicholas J., additional, Jonghe, Peter De, additional, Mudge, Jonathan M., additional, Weckhuysen, Sarah, additional, Sisodiya, Sanjay M., additional, and Frankish, Adam, additional
- Published
- 2019
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18. Using long and linked reads to improve an Atlantic herring (Clupea harengus) genome assembly
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í Kongsstovu, Sunnvør, primary, Mikalsen, Svein-Ole, additional, Homrum, Eydna í, additional, Jacobsen, Jan Arge, additional, Flicek, Paul, additional, and Dahl, Hans Atli, additional
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- 2019
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19. Genome-wide screening of mouse knockouts reveals novel genes required for normal integumentary and oculocutaneous structure and function
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Moore, Bret A., Flenniken, Ann M., Clary, Dave, Moshiri, Ata S., Nutter, Lauryl M. J., Berberovic, Zorana, Owen, Celeste, Newbigging, Susan, Adissu, Hibret, Eskandarian, Mohammad, McKerlie, Colin, Thomasy, Sara M., Lloyd, K. C. Kent, Murphy, Christopher J., Moshiri, Ala, Brown, Steve, Wells, Sara, Mallon, Ann-Marie, Beaudet, Arthur L., de Angelis, Martin Hrabe, Karp, Natasha, Braun, Bob, Herault, Yann, Gao, Xiang, Obata, Yuichi, Flicek, Paul, Meehan, Terrence, Parkinson, Helen, Smedley, Damian, Seong, J. K., Tocchini-Valentini, Glauco, and Mammano, Fabio
- Subjects
DISORDER ,Male ,0301 basic medicine ,CATTLE ,lcsh:Medicine ,Disease ,Genome ,CHEDIAK-HIGASHI-SYNDROME ,Mice ,0302 clinical medicine ,Oculocutaneous ,Genetics research ,HERMANSKY-PUDLAK-SYNDROME ,2.1 Biological and endogenous factors ,Aetiology ,lcsh:Science ,MUTATION ,Mice, Knockout ,Genetics ,Multidisciplinary ,Pigmentation ,Integumentary system ,RETINAL-PIGMENT EPITHELIUM ,Phenotype ,3. Good health ,Skin diseases ,LIGHT ,Albinism, Oculocutaneous ,Albinism ,Female ,Integument ,Integumentary System ,International Mouse Phenotyping Consortium ,Biotechnology ,Knockout ,Biology ,Article ,03 medical and health sciences ,medicine ,Animals ,Humans ,Eye diseases ,Gene ,Gene knockout ,Animal ,GIANT GRANULES ,MICE ,MODEL ,lcsh:R ,Human Genome ,medicine.disease ,Disease Models, Animal ,030104 developmental biology ,Disease Models ,lcsh:Q ,030217 neurology & neurosurgery - Abstract
Oculocutaneous syndromes are often due to mutations in single genes. In some cases, mouse models for these diseases exist in spontaneously occurring mutations, or in mice resulting from forward mutatagenesis screens. Here we present novel genes that may be causative for oculocutaneous disease in humans, discovered as part of a genome-wide screen of knockout-mice in a targeted single-gene deletion project. The International Mouse Phenotyping Consortium (IMPC) database (data release 10.0) was interrogated for all mouse strains with integument abnormalities, which were then cross-referenced individually to identify knockouts with concomitant ocular abnormalities attributed to the same targeted gene deletion. The search yielded 307 knockout strains from unique genes with integument abnormalities, 226 of which have not been previously associated with oculocutaneous conditions. Of the 307 knockout strains with integument abnormalities, 52 were determined to have ocular changes attributed to the targeted deletion, 35 of which represent novel oculocutaneous genes. Some examples of various integument abnormalities are shown, as well as two examples of knockout strains with oculocutaneous phenotypes. Each of the novel genes provided here are potentially relevant to the pathophysiology of human integumentary, or oculocutaneous conditions, such as albinism, phakomatoses, or other multi-system syndromes. The novel genes reported here may implicate molecular pathways relevant to these human diseases and may contribute to the discovery of novel therapeutic targets.
- Published
- 2019
20. Author Correction: Leveraging European infrastructures to access 1 million human genomes by 2022
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Saunders, Gary, primary, Baudis, Michael, additional, Becker, Regina, additional, Beltran, Sergi, additional, Béroud, Christophe, additional, Birney, Ewan, additional, Brooksbank, Cath, additional, Brunak, Søren, additional, Van den Bulcke, Marc, additional, Drysdale, Rachel, additional, Capella-Gutierrez, Salvador, additional, Flicek, Paul, additional, Florindi, Francesco, additional, Goodhand, Peter, additional, Gut, Ivo, additional, Heringa, Jaap, additional, Holub, Petr, additional, Hooyberghs, Jef, additional, Juty, Nick, additional, Keane, Thomas M., additional, Korbel, Jan O., additional, Lappalainen, Ilkka, additional, Leskosek, Brane, additional, Matthijs, Gert, additional, Mayrhofer, Michaela Th., additional, Metspalu, Andres, additional, Navarro, Arcadi, additional, Newhouse, Steven, additional, Nyrönen, Tommi, additional, Page, Angela, additional, Persson, Bengt, additional, Palotie, Aarno, additional, Parkinson, Helen, additional, Rambla, Jordi, additional, Salgado, David, additional, Steinfelder, Erik, additional, Swertz, Morris A., additional, Valencia, Alfonso, additional, Varma, Susheel, additional, Blomberg, Niklas, additional, and Scollen, Serena, additional
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- 2019
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21. Leveraging European infrastructures to access 1 million human genomes by 2022
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Saunders, Gary, primary, Baudis, Michael, additional, Becker, Regina, additional, Beltran, Sergi, additional, Béroud, Christophe, additional, Birney, Ewan, additional, Brooksbank, Cath, additional, Brunak, Søren, additional, Van den Bulcke, Marc, additional, Drysdale, Rachel, additional, Capella-Gutierrez, Salvador, additional, Flicek, Paul, additional, Florindi, Francesco, additional, Goodhand, Peter, additional, Gut, Ivo, additional, Heringa, Jaap, additional, Holub, Petr, additional, Hooyberghs, Jef, additional, Juty, Nick, additional, Keane, Thomas M., additional, Korbel, Jan O., additional, Lappalainen, Ilkka, additional, Leskosek, Brane, additional, Matthijs, Gert, additional, Mayrhofer, Michaela Th., additional, Metspalu, Andres, additional, Navarro, Arcadi, additional, Newhouse, Steven, additional, Nyrönen, Tommi, additional, Page, Angela, additional, Persson, Bengt, additional, Palotie, Aarno, additional, Parkinson, Helen, additional, Rambla, Jordi, additional, Salgado, David, additional, Steinfelder, Erik, additional, Swertz, Morris A., additional, Valencia, Alfonso, additional, Varma, Susheel, additional, Blomberg, Niklas, additional, and Scollen, Serena, additional
- Published
- 2019
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22. Correction to: Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome
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Cheung, Warren A., primary, Shao, Xiaojian, additional, Morin, Andréanne, additional, Siroux, Valérie, additional, Kwan, Tony, additional, Ge, Bing, additional, Aïssi, Dylan, additional, Chen, Lu, additional, Vasquez, Louella, additional, Allum, Fiona, additional, Guénard, Frédéric, additional, Bouzigon, Emmanuelle, additional, Simon, Marie-Michelle, additional, Boulier, Elodie, additional, Redensek, Adriana, additional, Watt, Stephen, additional, Datta, Avik, additional, Clarke, Laura, additional, Flicek, Paul, additional, Mead, Daniel, additional, Paul, Dirk S., additional, Beck, Stephan, additional, Bourque, Guillaume, additional, Lathrop, Mark, additional, Tchernof, André, additional, Vohl, Marie-Claude, additional, Demenais, Florence, additional, Pin, Isabelle, additional, Downes, Kate, additional, Stunnenberg, Hendrick G., additional, Soranzo, Nicole, additional, Pastinen, Tomi, additional, and Grundberg, Elin, additional
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- 2019
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23. Multi-platform discovery of haplotype-resolved structural variation in human genomes
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Chaisson, Mark J. P., primary, Sanders, Ashley D., additional, Zhao, Xuefang, additional, Malhotra, Ankit, additional, Porubsky, David, additional, Rausch, Tobias, additional, Gardner, Eugene J., additional, Rodriguez, Oscar L., additional, Guo, Li, additional, Collins, Ryan L., additional, Fan, Xian, additional, Wen, Jia, additional, Handsaker, Robert E., additional, Fairley, Susan, additional, Kronenberg, Zev N., additional, Kong, Xiangmeng, additional, Hormozdiari, Fereydoun, additional, Lee, Dillon, additional, Wenger, Aaron M., additional, Hastie, Alex R., additional, Antaki, Danny, additional, Anantharaman, Thomas, additional, Audano, Peter A., additional, Brand, Harrison, additional, Cantsilieris, Stuart, additional, Cao, Han, additional, Cerveira, Eliza, additional, Chen, Chong, additional, Chen, Xintong, additional, Chin, Chen-Shan, additional, Chong, Zechen, additional, Chuang, Nelson T., additional, Lambert, Christine C., additional, Church, Deanna M., additional, Clarke, Laura, additional, Farrell, Andrew, additional, Flores, Joey, additional, Galeev, Timur, additional, Gorkin, David U., additional, Gujral, Madhusudan, additional, Guryev, Victor, additional, Heaton, William Haynes, additional, Korlach, Jonas, additional, Kumar, Sushant, additional, Kwon, Jee Young, additional, Lam, Ernest T., additional, Lee, Jong Eun, additional, Lee, Joyce, additional, Lee, Wan-Ping, additional, Lee, Sau Peng, additional, Li, Shantao, additional, Marks, Patrick, additional, Viaud-Martinez, Karine, additional, Meiers, Sascha, additional, Munson, Katherine M., additional, Navarro, Fabio C. P., additional, Nelson, Bradley J., additional, Nodzak, Conor, additional, Noor, Amina, additional, Kyriazopoulou-Panagiotopoulou, Sofia, additional, Pang, Andy W. C., additional, Qiu, Yunjiang, additional, Rosanio, Gabriel, additional, Ryan, Mallory, additional, Stütz, Adrian, additional, Spierings, Diana C. J., additional, Ward, Alistair, additional, Welch, AnneMarie E., additional, Xiao, Ming, additional, Xu, Wei, additional, Zhang, Chengsheng, additional, Zhu, Qihui, additional, Zheng-Bradley, Xiangqun, additional, Lowy, Ernesto, additional, Yakneen, Sergei, additional, McCarroll, Steven, additional, Jun, Goo, additional, Ding, Li, additional, Koh, Chong Lek, additional, Ren, Bing, additional, Flicek, Paul, additional, Chen, Ken, additional, Gerstein, Mark B., additional, Kwok, Pui-Yan, additional, Lansdorp, Peter M., additional, Marth, Gabor T., additional, Sebat, Jonathan, additional, Shi, Xinghua, additional, Bashir, Ali, additional, Ye, Kai, additional, Devine, Scott E., additional, Talkowski, Michael E., additional, Mills, Ryan E., additional, Marschall, Tobias, additional, Korbel, Jan O., additional, Eichler, Evan E., additional, and Lee, Charles, additional
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- 2019
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24. Publisher Correction: Federated discovery and sharing of genomic data using Beacons
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Fiume, Marc, primary, Cupak, Miroslav, additional, Keenan, Stephen, additional, Rambla, Jordi, additional, de la Torre, Sabela, additional, Dyke, Stephanie O. M., additional, Brookes, Anthony J., additional, Carey, Knox, additional, Lloyd, David, additional, Goodhand, Peter, additional, Haeussler, Maximilian, additional, Baudis, Michael, additional, Stockinger, Heinz, additional, Dolman, Lena, additional, Lappalainen, Ilkka, additional, Törnroos, Juha, additional, Linden, Mikael, additional, Spalding, J. Dylan, additional, Ur-Rehman, Saif, additional, Page, Angela, additional, Flicek, Paul, additional, Sherry, Stephen, additional, Haussler, David, additional, Varma, Susheel, additional, Saunders, Gary, additional, and Scollen, Serena, additional
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- 2019
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25. Federated discovery and sharing of genomic data using Beacons
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Fiume, Marc, primary, Cupak, Miroslav, additional, Keenan, Stephen, additional, Rambla, Jordi, additional, de la Torre, Sabela, additional, Dyke, Stephanie O. M., additional, Brookes, Anthony J., additional, Carey, Knox, additional, Lloyd, David, additional, Goodhand, Peter, additional, Haeussler, Maximilian, additional, Baudis, Michael, additional, Stockinger, Heinz, additional, Dolman, Lena, additional, Lappalainen, Ilkka, additional, Törnroos, Juha, additional, Linden, Mikael, additional, Spalding, J. Dylan, additional, Ur-Rehman, Saif, additional, Page, Angela, additional, Flicek, Paul, additional, Sherry, Stephen, additional, Haussler, David, additional, Varma, Susheel, additional, Saunders, Gary, additional, and Scollen, Serena, additional
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- 2019
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26. Haplosaurus computes protein haplotypes for use in precision drug design
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Spooner, William, primary, McLaren, William, additional, Slidel, Timothy, additional, Finch, Donna K., additional, Butler, Robin, additional, Campbell, Jamie, additional, Eghobamien, Laura, additional, Rider, David, additional, Kiefer, Christine Mione, additional, Robinson, Matthew J., additional, Hardman, Colin, additional, Cunningham, Fiona, additional, Vaughan, Tristan, additional, Flicek, Paul, additional, and Huntington, Catherine Chaillan, additional
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- 2018
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27. Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci
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Lilue, Jingtao, primary, Doran, Anthony G., additional, Fiddes, Ian T., additional, Abrudan, Monica, additional, Armstrong, Joel, additional, Bennett, Ruth, additional, Chow, William, additional, Collins, Joanna, additional, Collins, Stephan, additional, Czechanski, Anne, additional, Danecek, Petr, additional, Diekhans, Mark, additional, Dolle, Dirk-Dominik, additional, Dunn, Matt, additional, Durbin, Richard, additional, Earl, Dent, additional, Ferguson-Smith, Anne, additional, Flicek, Paul, additional, Flint, Jonathan, additional, Frankish, Adam, additional, Fu, Beiyuan, additional, Gerstein, Mark, additional, Gilbert, James, additional, Goodstadt, Leo, additional, Harrow, Jennifer, additional, Howe, Kerstin, additional, Ibarra-Soria, Ximena, additional, Kolmogorov, Mikhail, additional, Lelliott, Chris J., additional, Logan, Darren W., additional, Loveland, Jane, additional, Mathews, Clayton E., additional, Mott, Richard, additional, Muir, Paul, additional, Nachtweide, Stefanie, additional, Navarro, Fabio C. P., additional, Odom, Duncan T., additional, Park, Naomi, additional, Pelan, Sarah, additional, Pham, Son K., additional, Quail, Mike, additional, Reinholdt, Laura, additional, Romoth, Lars, additional, Shirley, Lesley, additional, Sisu, Cristina, additional, Sjoberg-Herrera, Marcela, additional, Stanke, Mario, additional, Steward, Charles, additional, Thomas, Mark, additional, Threadgold, Glen, additional, Thybert, David, additional, Torrance, James, additional, Wong, Kim, additional, Wood, Jonathan, additional, Yalcin, Binnaz, additional, Yang, Fengtang, additional, Adams, David J., additional, Paten, Benedict, additional, and Keane, Thomas M., additional
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- 2018
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28. CTCF maintains regulatory homeostasis of cancer pathways
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Aitken, Sarah J., primary, Ibarra-Soria, Ximena, additional, Kentepozidou, Elissavet, additional, Flicek, Paul, additional, Feig, Christine, additional, Marioni, John C., additional, and Odom, Duncan T., additional
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- 2018
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29. Registered access: authorizing data access
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Dyke, Stephanie O. M., primary, Linden, Mikael, additional, Lappalainen, Ilkka, additional, De Argila, Jordi Rambla, additional, Carey, Knox, additional, Lloyd, David, additional, Spalding, J. Dylan, additional, Cabili, Moran N., additional, Kerry, Giselle, additional, Foreman, Julia, additional, Cutts, Tim, additional, Shabani, Mahsa, additional, Rodriguez, Laura L., additional, Haeussler, Maximilian, additional, Walsh, Brian, additional, Jiang, Xiaoqian, additional, Wang, Shuang, additional, Perrett, Daniel, additional, Boughtwood, Tiffany, additional, Matern, Andreas, additional, Brookes, Anthony J., additional, Cupak, Miro, additional, Fiume, Marc, additional, Pandya, Ravi, additional, Tulchinsky, Ilia, additional, Scollen, Serena, additional, Törnroos, Juha, additional, Das, Samir, additional, Evans, Alan C., additional, Malin, Bradley A., additional, Beck, Stephan, additional, Brenner, Steven E., additional, Nyrönen, Tommi, additional, Blomberg, Niklas, additional, Firth, Helen V., additional, Hurles, Matthew, additional, Philippakis, Anthony A., additional, Rätsch, Gunnar, additional, Brudno, Michael, additional, Boycott, Kym M., additional, Rehm, Heidi L., additional, Baudis, Michael, additional, Sherry, Stephen T., additional, Kato, Kazuto, additional, Knoppers, Bartha M., additional, Baker, Dixie, additional, and Flicek, Paul, additional
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- 2018
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30. The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia
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Beekman, Renée, primary, Chapaprieta, Vicente, additional, Russiñol, Núria, additional, Vilarrasa-Blasi, Roser, additional, Verdaguer-Dot, Núria, additional, Martens, Joost H. A., additional, Duran-Ferrer, Martí, additional, Kulis, Marta, additional, Serra, François, additional, Javierre, Biola M., additional, Wingett, Steven W., additional, Clot, Guillem, additional, Queirós, Ana C., additional, Castellano, Giancarlo, additional, Blanc, Julie, additional, Gut, Marta, additional, Merkel, Angelika, additional, Heath, Simon, additional, Vlasova, Anna, additional, Ullrich, Sebastian, additional, Palumbo, Emilio, additional, Enjuanes, Anna, additional, Martín-García, David, additional, Beà, Sílvia, additional, Pinyol, Magda, additional, Aymerich, Marta, additional, Royo, Romina, additional, Puiggros, Montserrat, additional, Torrents, David, additional, Datta, Avik, additional, Lowy, Ernesto, additional, Kostadima, Myrto, additional, Roller, Maša, additional, Clarke, Laura, additional, Flicek, Paul, additional, Agirre, Xabier, additional, Prosper, Felipe, additional, Baumann, Tycho, additional, Delgado, Julio, additional, López-Guillermo, Armando, additional, Fraser, Peter, additional, Yaspo, Marie-Laure, additional, Guigó, Roderic, additional, Siebert, Reiner, additional, Martí-Renom, Marc A., additional, Puente, Xose S., additional, López-Otín, Carlos, additional, Gut, Ivo, additional, Stunnenberg, Hendrik G., additional, Campo, Elias, additional, and Martin-Subero, Jose I., additional
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- 2018
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31. Convergent genomic signatures of domestication in sheep and goats
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Alberto, Florian J., primary, Boyer, Frédéric, additional, Orozco-terWengel, Pablo, additional, Streeter, Ian, additional, Servin, Bertrand, additional, de Villemereuil, Pierre, additional, Benjelloun, Badr, additional, Librado, Pablo, additional, Biscarini, Filippo, additional, Colli, Licia, additional, Barbato, Mario, additional, Zamani, Wahid, additional, Alberti, Adriana, additional, Engelen, Stefan, additional, Stella, Alessandra, additional, Joost, Stéphane, additional, Ajmone-Marsan, Paolo, additional, Negrini, Riccardo, additional, Orlando, Ludovic, additional, Rezaei, Hamid Reza, additional, Naderi, Saeid, additional, Clarke, Laura, additional, Flicek, Paul, additional, Wincker, Patrick, additional, Coissac, Eric, additional, Kijas, James, additional, Tosser-Klopp, Gwenola, additional, Chikhi, Abdelkader, additional, Bruford, Michael W., additional, Taberlet, Pierre, additional, and Pompanon, François, additional
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- 2018
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32. A standardized framework for representation of ancestry data in genomics studies, with application to the NHGRI-EBI GWAS Catalog
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Morales, Joannella, primary, Welter, Danielle, additional, Bowler, Emily H., additional, Cerezo, Maria, additional, Harris, Laura W., additional, McMahon, Aoife C., additional, Hall, Peggy, additional, Junkins, Heather A., additional, Milano, Annalisa, additional, Hastings, Emma, additional, Malangone, Cinzia, additional, Buniello, Annalisa, additional, Burdett, Tony, additional, Flicek, Paul, additional, Parkinson, Helen, additional, Cunningham, Fiona, additional, Hindorff, Lucia A., additional, and MacArthur, Jacqueline A. L., additional
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- 2018
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33. Genome variation and conserved regulation identify genomic regions responsible for strain specific phenotypes in rat
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Martín-Gálvez, David, primary, Dunoyer de Segonzac, Denis, additional, Ma, Man Chun John, additional, Kwitek, Anne E., additional, Thybert, David, additional, and Flicek, Paul, additional
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- 2017
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34. Complexity and conservation of regulatory landscapes underlie evolutionary resilience of mammalian gene expression
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Berthelot, Camille, primary, Villar, Diego, additional, Horvath, Julie E., additional, Odom, Duncan T., additional, and Flicek, Paul, additional
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- 2017
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35. Genetic variation and gene expression across multiple tissues and developmental stages in a nonhuman primate
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Jasinska, Anna J, primary, Zelaya, Ivette, additional, Service, Susan K, additional, Peterson, Christine B, additional, Cantor, Rita M, additional, Choi, Oi-Wa, additional, DeYoung, Joseph, additional, Eskin, Eleazar, additional, Fairbanks, Lynn A, additional, Fears, Scott, additional, Furterer, Allison E, additional, Huang, Yu S, additional, Ramensky, Vasily, additional, Schmitt, Christopher A, additional, Svardal, Hannes, additional, Jorgensen, Matthew J, additional, Kaplan, Jay R, additional, Villar, Diego, additional, Aken, Bronwen L, additional, Flicek, Paul, additional, Nag, Rishi, additional, Wong, Emily S, additional, Blangero, John, additional, Dyer, Thomas D, additional, Bogomolov, Marina, additional, Benjamini, Yoav, additional, Weinstock, George M, additional, Dewar, Ken, additional, Sabatti, Chiara, additional, Wilson, Richard K, additional, Jentsch, J David, additional, Warren, Wesley, additional, Coppola, Giovanni, additional, Woods, Roger P, additional, and Freimer, Nelson B, additional
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- 2017
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36. Interplay of cis and trans mechanisms driving transcription factor binding and gene expression evolution
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Wong, Emily S., primary, Schmitt, Bianca M., additional, Kazachenka, Anastasiya, additional, Thybert, David, additional, Redmond, Aisling, additional, Connor, Frances, additional, Rayner, Tim F., additional, Feig, Christine, additional, Ferguson-Smith, Anne C., additional, Marioni, John C., additional, Odom, Duncan T., additional, and Flicek, Paul, additional
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- 2017
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37. Platelet function is modified by common sequence variation in megakaryocyte super enhancers
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Petersen, Romina, primary, Lambourne, John J., additional, Javierre, Biola M., additional, Grassi, Luigi, additional, Kreuzhuber, Roman, additional, Ruklisa, Dace, additional, Rosa, Isabel M., additional, Tomé, Ana R., additional, Elding, Heather, additional, van Geffen, Johanna P., additional, Jiang, Tao, additional, Farrow, Samantha, additional, Cairns, Jonathan, additional, Al-Subaie, Abeer M., additional, Ashford, Sofie, additional, Attwood, Antony, additional, Batista, Joana, additional, Bouman, Heleen, additional, Burden, Frances, additional, Choudry, Fizzah A., additional, Clarke, Laura, additional, Flicek, Paul, additional, Garner, Stephen F., additional, Haimel, Matthias, additional, Kempster, Carly, additional, Ladopoulos, Vasileios, additional, Lenaerts, An-Sofie, additional, Materek, Paulina M., additional, McKinney, Harriet, additional, Meacham, Stuart, additional, Mead, Daniel, additional, Nagy, Magdolna, additional, Penkett, Christopher J., additional, Rendon, Augusto, additional, Seyres, Denis, additional, Sun, Benjamin, additional, Tuna, Salih, additional, van der Weide, Marie-Elise, additional, Wingett, Steven W., additional, Martens, Joost H., additional, Stegle, Oliver, additional, Richardson, Sylvia, additional, Vallier, Ludovic, additional, Roberts, David J., additional, Freson, Kathleen, additional, Wernisch, Lorenz, additional, Stunnenberg, Hendrik G., additional, Danesh, John, additional, Fraser, Peter, additional, Soranzo, Nicole, additional, Butterworth, Adam S., additional, Heemskerk, Johan W., additional, Turro, Ernest, additional, Spivakov, Mikhail, additional, Ouwehand, Willem H., additional, Astle, William J., additional, Downes, Kate, additional, Kostadima, Myrto, additional, and Frontini, Mattia, additional
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- 2017
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38. Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome
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Cheung, Warren A., primary, Shao, Xiaojian, additional, Morin, Andréanne, additional, Siroux, Valérie, additional, Kwan, Tony, additional, Ge, Bing, additional, Aïssi, Dylan, additional, Chen, Lu, additional, Vasquez, Louella, additional, Allum, Fiona, additional, Guénard, Frédéric, additional, Bouzigon, Emmanuelle, additional, Simon, Marie-Michelle, additional, Boulier, Elodie, additional, Redensek, Adriana, additional, Watt, Stephen, additional, Datta, Avik, additional, Clarke, Laura, additional, Flicek, Paul, additional, Mead, Daniel, additional, Paul, Dirk S., additional, Beck, Stephan, additional, Bourque, Guillaume, additional, Lathrop, Mark, additional, Tchernof, André, additional, Vohl, Marie-Claude, additional, Demenais, Florence, additional, Pin, Isabelle, additional, Downes, Kate, additional, Stunnenberg, Hendrick G., additional, Soranzo, Nicole, additional, Pastinen, Tomi, additional, and Grundberg, Elin, additional
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- 2017
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39. Increased DNA methylation variability in type 1 diabetes across three immune effector cell types
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Paul, Dirk S., primary, Teschendorff, Andrew E., additional, Dang, Mary A.N., additional, Lowe, Robert, additional, Hawa, Mohammed I., additional, Ecker, Simone, additional, Beyan, Huriya, additional, Cunningham, Stephanie, additional, Fouts, Alexandra R., additional, Ramelius, Anita, additional, Burden, Frances, additional, Farrow, Samantha, additional, Rowlston, Sophia, additional, Rehnstrom, Karola, additional, Frontini, Mattia, additional, Downes, Kate, additional, Busche, Stephan, additional, Cheung, Warren A., additional, Ge, Bing, additional, Simon, Marie-Michelle, additional, Bujold, David, additional, Kwan, Tony, additional, Bourque, Guillaume, additional, Datta, Avik, additional, Lowy, Ernesto, additional, Clarke, Laura, additional, Flicek, Paul, additional, Libertini, Emanuele, additional, Heath, Simon, additional, Gut, Marta, additional, Gut, Ivo G, additional, Ouwehand, Willem H., additional, Pastinen, Tomi, additional, Soranzo, Nicole, additional, Hofer, Sabine E., additional, Karges, Beate, additional, Meissner, Thomas, additional, Boehm, Bernhard O., additional, Cilio, Corrado, additional, Elding Larsson, Helena, additional, Lernmark, Åke, additional, Steck, Andrea K., additional, Rakyan, Vardhman K., additional, Beck, Stephan, additional, and Leslie, R. David, additional
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- 2016
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40. Erratum to: Making sense of big data in health research: towards an EU action plan
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Auffray, Charles, primary, Balling, Rudi, additional, Barroso, Inês, additional, Bencze, László, additional, Benson, Mikael, additional, Bergeron, Jay, additional, Bernal-Delgado, Enrique, additional, Blomberg, Niklas, additional, Bock, Christoph, additional, Conesa, Ana, additional, Del Signore, Susanna, additional, Delogne, Christophe, additional, Devilee, Peter, additional, Di Meglio, Alberto, additional, Eijkemans, Marinus, additional, Flicek, Paul, additional, Graf, Norbert, additional, Grimm, Vera, additional, Guchelaar, Henk-Jan, additional, Guo, Yi-Ke, additional, Gut, Ivo Glynne, additional, Hanbury, Allan, additional, Hanif, Shahid, additional, Hilgers, Ralf-Dieter, additional, Honrado, Ángel, additional, Hose, D. Rod, additional, Houwing-Duistermaat, Jeanine, additional, Hubbard, Tim, additional, Janacek, Sophie Helen, additional, Karanikas, Haralampos, additional, Kievits, Tim, additional, Kohler, Manfred, additional, Kremer, Andreas, additional, Lanfear, Jerry, additional, Lengauer, Thomas, additional, Maes, Edith, additional, Meert, Theo, additional, Müller, Werner, additional, Nickel, Dörthe, additional, Oledzki, Peter, additional, Pedersen, Bertrand, additional, Petkovic, Milan, additional, Pliakos, Konstantinos, additional, Rattray, Magnus, additional, i Màs, Josep Redón, additional, Schneider, Reinhard, additional, Sengstag, Thierry, additional, Serra-Picamal, Xavier, additional, Spek, Wouter, additional, Vaas, Lea A. I., additional, van Batenburg, Okker, additional, Vandelaer, Marc, additional, Varnai, Peter, additional, Villoslada, Pablo, additional, Vizcaíno, Juan Antonio, additional, Wubbe, John Peter Mary, additional, and Zanetti, Gianluigi, additional
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- 2016
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41. Mitochondrial heteroplasmy in vertebrates using ChIP-sequencing data
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Rensch, Thomas, primary, Villar, Diego, additional, Horvath, Julie, additional, Odom, Duncan T., additional, and Flicek, Paul, additional
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- 2016
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42. Making sense of big data in health research: Towards an EU action plan
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Auffray, Charles, primary, Balling, Rudi, additional, Barroso, Inês, additional, Bencze, László, additional, Benson, Mikael, additional, Bergeron, Jay, additional, Bernal-Delgado, Enrique, additional, Blomberg, Niklas, additional, Bock, Christoph, additional, Conesa, Ana, additional, Del Signore, Susanna, additional, Delogne, Christophe, additional, Devilee, Peter, additional, Di Meglio, Alberto, additional, Eijkemans, Marinus, additional, Flicek, Paul, additional, Graf, Norbert, additional, Grimm, Vera, additional, Guchelaar, Henk-Jan, additional, Guo, Yi-Ke, additional, Gut, Ivo Glynne, additional, Hanbury, Allan, additional, Hanif, Shahid, additional, Hilgers, Ralf-Dieter, additional, Honrado, Ángel, additional, Hose, D. Rod, additional, Houwing-Duistermaat, Jeanine, additional, Hubbard, Tim, additional, Janacek, Sophie Helen, additional, Karanikas, Haralampos, additional, Kievits, Tim, additional, Kohler, Manfred, additional, Kremer, Andreas, additional, Lanfear, Jerry, additional, Lengauer, Thomas, additional, Maes, Edith, additional, Meert, Theo, additional, Müller, Werner, additional, Nickel, Dörthe, additional, Oledzki, Peter, additional, Pedersen, Bertrand, additional, Petkovic, Milan, additional, Pliakos, Konstantinos, additional, Rattray, Magnus, additional, i Màs, Josep Redón, additional, Schneider, Reinhard, additional, Sengstag, Thierry, additional, Serra-Picamal, Xavier, additional, Spek, Wouter, additional, Vaas, Lea A. I., additional, van Batenburg, Okker, additional, Vandelaer, Marc, additional, Varnai, Peter, additional, Villoslada, Pablo, additional, Vizcaíno, Juan Antonio, additional, Wubbe, John Peter Mary, additional, and Zanetti, Gianluigi, additional
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- 2016
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43. The Ensembl Variant Effect Predictor
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McLaren, William, primary, Gil, Laurent, additional, Hunt, Sarah E., additional, Riat, Harpreet Singh, additional, Ritchie, Graham R. S., additional, Thormann, Anja, additional, Flicek, Paul, additional, and Cunningham, Fiona, additional
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- 2016
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44. Quantitative analysis of chromatin interaction changes upon a 4.3 Mb deletion at mouse 4E2
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Zepeda-Mendoza, Cinthya J., primary, Mukhopadhyay, Swagatam, additional, Wong, Emily S., additional, Harder, Nathalie, additional, Splinter, Erik, additional, de Wit, Elzo, additional, Eckersley-Maslin, Melanie A., additional, Ried, Thomas, additional, Eils, Roland, additional, Rohr, Karl, additional, Mills, Alea, additional, de Laat, Wouter, additional, Flicek, Paul, additional, Sengupta, Anirvan M., additional, and Spector, David L., additional
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- 2015
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45. Epigenome data release: a participant-centered approach to privacy protection
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Dyke, Stephanie O. M., primary, Cheung, Warren A., additional, Joly, Yann, additional, Ammerpohl, Ole, additional, Lutsik, Pavlo, additional, Rothstein, Mark A., additional, Caron, Maxime, additional, Busche, Stephan, additional, Bourque, Guillaume, additional, Rönnblom, Lars, additional, Flicek, Paul, additional, Beck, Stephan, additional, Hirst, Martin, additional, Stunnenberg, Henk, additional, Siebert, Reiner, additional, Walter, Jörn, additional, and Pastinen, Tomi, additional
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- 2015
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46. The European Genome-phenome Archive of human data consented for biomedical research
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Lappalainen, Ilkka, primary, Almeida-King, Jeff, additional, Kumanduri, Vasudev, additional, Senf, Alexander, additional, Spalding, John Dylan, additional, ur-Rehman, Saif, additional, Saunders, Gary, additional, Kandasamy, Jag, additional, Caccamo, Mario, additional, Leinonen, Rasko, additional, Vaughan, Brendan, additional, Laurent, Thomas, additional, Rowland, Francis, additional, Marin-Garcia, Pablo, additional, Barker, Jonathan, additional, Jokinen, Petteri, additional, Torres, Angel Carreño, additional, de Argila, Jordi Rambla, additional, Llobet, Oscar Martinez, additional, Medina, Ignacio, additional, Puy, Marc Sitges, additional, Alberich, Mario, additional, de la Torre, Sabela, additional, Navarro, Arcadi, additional, Paschall, Justin, additional, and Flicek, Paul, additional
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- 2015
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47. Whole-genome fingerprint of the DNA methylome during human B cell differentiation
- Author
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Kulis, Marta, primary, Merkel, Angelika, additional, Heath, Simon, additional, Queirós, Ana C, additional, Schuyler, Ronald P, additional, Castellano, Giancarlo, additional, Beekman, Renée, additional, Raineri, Emanuele, additional, Esteve, Anna, additional, Clot, Guillem, additional, Verdaguer-Dot, Néria, additional, Duran-Ferrer, Martí, additional, Russiñol, Nuria, additional, Vilarrasa-Blasi, Roser, additional, Ecker, Simone, additional, Pancaldi, Vera, additional, Rico, Daniel, additional, Agueda, Lidia, additional, Blanc, Julie, additional, Richardson, David, additional, Clarke, Laura, additional, Datta, Avik, additional, Pascual, Marien, additional, Agirre, Xabier, additional, Prosper, Felipe, additional, Alignani, Diego, additional, Paiva, Bruno, additional, Caron, Gersende, additional, Fest, Thierry, additional, Muench, Marcus O, additional, Fomin, Marina E, additional, Lee, Seung-Tae, additional, Wiemels, Joseph L, additional, Valencia, Alfonso, additional, Gut, Marta, additional, Flicek, Paul, additional, Stunnenberg, Hendrik G, additional, Siebert, Reiner, additional, Küppers, Ralf, additional, Gut, Ivo G, additional, Campo, Elías, additional, and Martín-Subero, José I, additional
- Published
- 2015
- Full Text
- View/download PDF
48. The Ensembl Regulatory Build
- Author
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Zerbino, Daniel R, primary, Wilder, Steven P, additional, Johnson, Nathan, additional, Juettemann, Thomas, additional, and Flicek, Paul R, additional
- Published
- 2015
- Full Text
- View/download PDF
49. Avianbase: a community resource for bird genomics
- Author
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Eöry, Lél, primary, Gilbert, M Thomas P, additional, Li, Cai, additional, Li, Bo, additional, Archibald, Alan, additional, Aken, Bronwen L, additional, Zhang, Guojie, additional, Jarvis, Erich, additional, Flicek, Paul, additional, and Burt, David W, additional
- Published
- 2015
- Full Text
- View/download PDF
50. Extending reference assembly models
- Author
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Church, Deanna M, primary, Schneider, Valerie A, additional, Steinberg, Karyn Meltz, additional, Schatz, Michael C, additional, Quinlan, Aaron R, additional, Chin, Chen-Shan, additional, Kitts, Paul A, additional, Aken, Bronwen, additional, Marth, Gabor T, additional, Hoffman, Michael M, additional, Herrero, Javier, additional, Mendoza, M Lisandra Zepeda, additional, Durbin, Richard, additional, and Flicek, Paul, additional
- Published
- 2015
- Full Text
- View/download PDF
Catalog
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