15 results on '"Jae Min Song"'
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2. Micro-vibrational erythrocyte sedimentation rate (ESR) for sensitive measurement of erythrocyte aggregation
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Hyeonji Hong, Eunseop Yeom, and Jae-Min Song
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Syringe driver ,medicine.diagnostic_test ,Chemistry ,Analytical chemistry ,Hematocrit ,Sedimentation ,Condensed Matter Physics ,Erythrocyte aggregation ,Volumetric flow rate ,Shear rate ,Shear (sheet metal) ,Erythrocyte sedimentation rate ,medicine ,Electrical and Electronic Engineering - Abstract
The erythrocyte sedimentation rate (ESR) can act as a useful index of nonspecific disease activity in the diagnosis of inflammatory conditions. However, there are several drawbacks, including long time measurement. To promote ESR tendency, a micro-vibrational erythrocyte sedimentation rate (MV-ESR) was proposed. By controlling the profile of injecting flow rate into blood sample, air between the syringe pump and bottom of blood column was compressed and released. Micro-vibration (MV) is simple reciprocating flow including motion in both positive and negative directions in a line. It is determined as the edge of the interface between top of blood column and air is pinned under the pressure wave. From that, shear rate generated by determined MV is from 0 to 10–2 (s−1) in this study. Extremely low shear conditions may enhance the probability of erythrocyte aggregation formation. During measurement, a meniscus of separated plasma and sedimented erythrocytes was recorded using a camera. For validation of the proposed MV-ESR method, the effects of hematocrit as well as the frequency and amplitude of flow in the sedimentation tube were investigated. To quantify the enhancement of MV-ESR, the area of relative gradient (ARG) based on a relative gradient of 1 was used. When MV with a maximum flow rate of 1 mL/min and a period of 100 ms was produced until 15 min, MV-ESR exhibited the best performance. Then, the proposed technique was used to diagnose the ESR difference between a normal and periodontitis patient. The characteristic time (λESR), indicating the degree completion of the erythrocyte sedimentation, of the periodontitis patients was lower than that of the control. Based on the experimental demonstrations, λESR of the MV-ESR method has significant potential in the diagnosis of inflammatory conditions and prognosis of non-inflammatory conditions.
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- 2021
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3. Quantitative study for control of air–liquid segmented flow in a 3D-printed chip using a vacuum-driven system
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Hyeonji, Hong, Jae Min, Song, and Eunseop, Yeom
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Multidisciplinary - Abstract
The formation of droplets or bubbles in a microfluidic system is a significant topic requiring device miniaturization and a small volume of samples. Especially, a two-phase segmented flow can be applied to micro-mixing for chemical reactions and the treatment of heat and mass transfer. In this study, a flow of liquid slugs and bubbles was generated in a 3D-printed chip and controlled by a single pump creating a vacuum at the outlet. The pump and chip device were integrated to form a simple and portable system. The size and flow rate of liquid slugs, obtained through image processing techniques, were analyzed considering several parameters related to hydraulic resistance and pressure drop. In addition, the effect of segmentation on mixing was observed by measuring the intensity change using two different colored inks. The hydraulic resistance of air and liquid flows can be controlled by changing the tube length of air flow and the viscosity of liquid flow. Because the total pressure drop along the channel was produced using a single pump at the outlet of the channel, the size and flow rate of the liquid slugs showed a near linear relation depending on the hydraulic resistances. In contrast, as the total pressure varied with the flow rate of the pump, the size of the liquid slugs showed a nonlinear trend. This indicates that the frequency of the liquid slug formation induced by the squeezed bubble may be affected by several forces during the development of the liquid slugs and bubbles. In addition, each volume of liquid slug segmented by the air is within the range of 10–1 to 2 µL for this microfluidic system. The segmentation contributes to mixing efficiency based on the increased homogeneity factor of liquid. This study provides a new insight to better understand the liquid slug or droplet formation and predict the segmented flow based on the relationship between the resistance, flow rate, and pressure drop.
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- 2022
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4. Automatic mandibular canal detection using a deep convolutional neural network
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Jae Joon Hwang, Gloria Hyunjung Kwak, Yun-Hoa Jung, Bong-Hae Cho, Hae Ryoun Park, Pan Hui, Jae-Min Song, Eun-Jung Kwak, and Department of Computer Science
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Adult ,Male ,Cone beam computed tomography ,Adolescent ,Computer science ,Mandibular Nerve ,SEGMENTATION ,lcsh:Medicine ,Mandibular canal ,Mandible ,Inferior alveolar nerve ,Convolutional neural network ,Patient Care Planning ,Article ,030218 nuclear medicine & medical imaging ,Young Adult ,03 medical and health sciences ,Deep Learning ,Imaging, Three-Dimensional ,0302 clinical medicine ,medicine ,Medical imaging ,Humans ,Computer vision ,Segmentation ,POSITION ,lcsh:Science ,Aged ,Aged, 80 and over ,Multidisciplinary ,business.industry ,Deep learning ,lcsh:R ,Cone-beam computed tomography ,Dental radiology ,030206 dentistry ,Middle Aged ,Temporomandibular Joint Disorders ,113 Computer and information sciences ,medicine.anatomical_structure ,Three-dimensional imaging ,lcsh:Q ,Female ,3111 Biomedicine ,Neural Networks, Computer ,Artificial intelligence ,business ,CT - Abstract
The practicability of deep learning techniques has been demonstrated by their successful implementation in varied fields, including diagnostic imaging for clinicians. In accordance with the increasing demands in the healthcare industry, techniques for automatic prediction and detection are being widely researched. Particularly in dentistry, for various reasons, automated mandibular canal detection has become highly desirable. The positioning of the inferior alveolar nerve (IAN), which is one of the major structures in the mandible, is crucial to prevent nerve injury during surgical procedures. However, automatic segmentation using Cone beam computed tomography (CBCT) poses certain difficulties, such as the complex appearance of the human skull, limited number of datasets, unclear edges, and noisy images. Using work-in-progress automation software, experiments were conducted with models based on 2D SegNet, 2D and 3D U-Nets as preliminary research for a dental segmentation automation tool. The 2D U-Net with adjacent images demonstrates higher global accuracy of 0.82 than naïve U-Net variants. The 2D SegNet showed the second highest global accuracy of 0.96, and the 3D U-Net showed the best global accuracy of 0.99. The automated canal detection system through deep learning will contribute significantly to efficient treatment planning and to reducing patients’ discomfort by a dentist. This study will be a preliminary report and an opportunity to explore the application of deep learning to other dental fields.
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- 2020
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5. Design of microfluidic viscometer based on pressure estimation
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Eunseop Yeom, Jae-Min Song, and Dongkuk Kang
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Materials science ,Flow (psychology) ,Microfluidics ,Viscometer ,020207 software engineering ,02 engineering and technology ,Mechanics ,Condensed Matter Physics ,01 natural sciences ,010305 fluids & plasmas ,Radius of curvature (optics) ,Volumetric flow rate ,Shear rate ,Viscosity ,Flow conditions ,0103 physical sciences ,0202 electrical engineering, electronic engineering, information engineering ,Electrical and Electronic Engineering - Abstract
Accurate measurement of viscosity using small samples is important considering the role of viscosity in the dynamics of physical, chemical, and biological systems. The microfluidic viscometer proposed in previous studies can measure the viscosity of fluids by estimating the pressure between samples and reference flows from the interfacial width. Therefore, accurate detection of the interfacial width is important in terms of the performance of a viscometer. We investigate flow behaviors in the microfluidic viscometer depending on their shape. In the simulation results, sample and reference flows are accelerated around the sharp corners of the viscometer. Flow disturbance around corners results in regions with a high-shear rate. The area of the high-shear region becomes wider as the confluence angle increases. To experimentally check the variation of flow conditions depending on the confluence angle, the flow rate and interfacial width were measured in a microfluidic viscometer designed using mold fabricated with a 3D printer. The width ratios obtained from the experiment results are varied depending on the confluence angle of the viscometer. This indicates that a high-shear region around a sharp corner can lead to inaccurate measurement of the microfluidic viscometer. To reduce the high-shear regions, the distributions of the shear rate were investigated depending on the degree of the rounded corners. A region with a high-shear rate is significantly decreased by increasing the radius of curvature. From the results, a microfluidic viscometer with a confluence angle of 30° and rounded curves is suitable for measuring the viscosity based on an estimation of the pressure. By using the selected design of the microfluidic viscometer, the viscosity of a blood sample is reasonably measured depending on the shear rate. A microfluidic viscometer with a suitable design can be utilized as a viscometer with significant advantages in terms of mobility and ease of operation by combining it with mobile sensing equipment.
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- 2018
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6. A new prokaryotic expression vector for the expression of antimicrobial peptide abaecin using SUMO fusion tag
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Jae Min Song, Seon Woong Kim, Kwang-Chul Kwon, Soon Young Kim, and Da Sol Kim
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0106 biological sciences ,Recombinant Fusion Proteins ,lcsh:Biotechnology ,Antimicrobial peptides ,Genetic Vectors ,Gene Expression ,Peptide ,Bacillus subtilis ,medicine.disease_cause ,01 natural sciences ,03 medical and health sciences ,Abaecin ,Anti-Infective Agents ,010608 biotechnology ,lcsh:TP248.13-248.65 ,medicine ,Escherichia coli ,Codon ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Expression vector ,biology ,Small ubiquitin-related modifier (SUMO) ,Codon optimization ,biology.organism_classification ,Fusion protein ,Cecropin ,chemistry ,Biochemistry ,Small Ubiquitin-Related Modifier Proteins ,Insect Proteins ,Target protein ,Antimicrobial peptide ,Research Article ,Antimicrobial Cationic Peptides ,Biotechnology - Abstract
Background Despite the growing demand for antimicrobial peptides (AMPs) for clinical use as an alternative approach against antibiotic-resistant bacteria, the manufacture of AMPs relies on expensive, small-scale chemical methods. The small ubiquitin-related modifier (SUMO) tag is industrially practical for increasing the yield of recombinant proteins by increasing solubility and preventing degradation in expression systems. Results A new vector system, pKSEC1, was designed to produce AMPs, which can work in prokaryotic systems such as Escherichia coli and plant chloroplasts. 6xHis was tagged to SUMO for purification of SUMO-fused AMPs. Abaecin, a 34-aa-long antimicrobial peptide from honeybees, was expressed in a fusion form to 6xHis-SUMO in a new vector system to evaluate the prokaryotic expression platform of the antimicrobial peptides. The fusion sequences were codon-optimized in three different combinations and expressed in E. coli. The combination of the native SUMO sequence with codon-optimized abaecin showed the highest expression level among the three combinations, and most of the expressed fusion proteins were detected in soluble fractions. Cleavage of the SUMO tag by sumoase produced a 29-aa-long abaecin derivative with a C-terminal deletion. However, this abaecin derivative still retained the binding sequence for its target protein, DnaK. Antibacterial activity of the 29-aa long abaecin was tested against Bacillus subtilis alone or in combination with cecropin B. The combined treatment of the abaecin derivative and cecropin B showed bacteriolytic activity 2 to 3 times greater than that of abaecin alone. Conclusions Using a SUMO-tag with an appropriate codon-optimization strategy could be an approach for the production of antimicrobial peptides in E.coli without affecting the viability of the host cell. Electronic supplementary material The online version of this article (10.1186/s12896-019-0506-x) contains supplementary material, which is available to authorized users.
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- 2019
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7. Advances in novel influenza vaccines: a patent review
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Jae-Min Song
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0301 basic medicine ,Influenza vaccine ,Human influenza ,medicine.disease_cause ,Applied Microbiology and Biotechnology ,Microbiology ,Patents as Topic ,03 medical and health sciences ,0302 clinical medicine ,Drug Discovery ,Influenza, Human ,Pandemic ,medicine ,Animals ,Humans ,030212 general & internal medicine ,Vaccination ,virus diseases ,General Medicine ,Virology ,Disease control ,Influenza A virus subtype H5N1 ,030104 developmental biology ,Influenza Vaccines ,Disease prevention ,Cell based - Abstract
The threat of a major human influenza pandemic such as the avian H5N1 or the 2009 new H1N1 has emphasized the need for effective prevention strategies to combat these pathogens. Although egg based influenza vaccines have been well established for a long time, it remains an ongoing public health need to develop alternative production methods that ensures improved safety, efficacy, and ease of administration compared with conventional influenza vaccines. This article is intended to cover some of the recent advances and related patents on the development of influenza vaccines including live attenuated, cell based, genomic and synthetic peptide vaccines.
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- 2016
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8. Effects of microstructural variation on Charpy impact properties in heavy-section Mn-Mo-Ni low alloy steel for reactor pressure vessel
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Kwon-Jae Choi, Bong-Sang Lee, Jae-Min Song, Seokmin Hong, and Min-Chul Kim
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Toughness ,Materials science ,Bainite ,020502 materials ,Metallurgy ,Alloy steel ,Metals and Alloys ,Charpy impact test ,02 engineering and technology ,Lath ,engineering.material ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,Microstructure ,Grain size ,0205 materials engineering ,Mechanics of Materials ,Materials Chemistry ,engineering ,Grain boundary ,0210 nano-technology - Abstract
The effects of microstructural changes in heavy-section Mn-Mo-Ni low alloy steel on Charpy impact properties were investigated using a 210 mm thick reactor pressure vessel. Specimens were sampled from 5 different positions at intervals of 1/4 thickness from the inner surface to the outer surface. A detailed microstructural analysis of impact-fractured specimens showed that coarse carbides along the lath boundaries acted as fracture initiation sites, and cleavage cracks deviated at prior-austenite grain boundaries and bainite lath boundaries. Upper shelf energy was higher and energy transition temperature was lower at the surface positon, where fine bainitic microstructure with homogeneously distributed fine carbides were present. Toward the center, coarse upper bainite and precipitation of coarse inter-lath carbides were observed, which deteriorated impact properties. At the 1/4T position, the Charpy impact properties were worse than those at other positions owing to the combination of elongated-coarse inter-lath carbides and large effective grain size.
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- 2016
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9. Comparative study of chitosan/fibroin–hydroxyapatite and collagen membranes for guided bone regeneration in rat calvarial defects: micro-computed tomography analysis
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Sang Yong Yoon, Jae-Min Song, Sang Hun Shin, Yong Deok Kim, Young Jae Baek, Jae-Yeol Lee, and Hong Sung Kim
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Bone Regeneration ,chitosan/fibroin–hydroxyapatite ,Dentistry ,Fibroin ,rat calvarial defect ,Calvaria ,Bone healing ,Rats, Sprague-Dawley ,Chitosan ,chemistry.chemical_compound ,medicine ,Animals ,micro-computed tomography ,Bone regeneration ,General Dentistry ,Bone mineral ,business.industry ,Chemistry ,Skull ,collagen membrane ,X-Ray Microtomography ,Rats ,medicine.anatomical_structure ,Membrane ,guided bone regeneration ,Trephine ,Original Article ,Collagen ,Fibroins ,business ,Biomedical engineering - Abstract
This study aimed to utilize micro-computed tomography (micro-CT) analysis to compare new bone formation in rat calvarial defects using chitosan/fibroin–hydroxyapatite (CFB–HAP) or collagen (Bio-Gide) membranes. Fifty-four (54) rats were studied. A circular bony defect (8 mm diameter) was formed in the centre of the calvaria using a trephine bur. The CFB–HAP membrane was prepared by thermally induced phase separation. In the experimental group (n=18), the CFB–HAP membrane was used to cover the bony defect, and in the control group (n=18), a resorbable collagen membrane (Bio-Gide) was used. In the negative control group (n=18), no membrane was used. In each group, six animals were euthanized at 2, 4 and 8 weeks after surgery. The specimens were then analysed using micro-CT. There were significant differences in bone volume (BV) and bone mineral density (BMD) (P
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- 2014
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10. Effect of low-level laser therapy on oral keratinocytes exposed to bisphosphonate
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Jae-Min Song, Yong-Deok Kim, In-Kyo Chung, Sang-Hun Shin, Bong-Soo Park, In-Ryoung Kim, and Jae-Yeol Lee
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Keratinocytes ,Vascular Endothelial Growth Factor A ,Pathology ,medicine.medical_specialty ,Side effect ,Cell Survival ,medicine.medical_treatment ,Apoptosis ,Dermatology ,Collagen Type I ,Cell Movement ,Cell Line, Tumor ,medicine ,Humans ,MTT assay ,Low-Level Light Therapy ,Low level laser therapy ,Wound Healing ,Alendronate ,Diphosphonates ,business.industry ,Interleukin-8 ,Bisphosphonate ,medicine.disease ,HaCaT ,medicine.anatomical_structure ,Cancer research ,Bisphosphonate-Associated Osteonecrosis of the Jaw ,Surgery ,Osteonecrosis of the jaw ,business ,Keratinocyte ,Wound healing - Abstract
Bisphosphonate-related osteonecrosis of the jaw (BRONJ) is a side effect of bisphosphonate therapy. However, its pathophysiology is not yet fully elucidated, and effective treatment of BRONJ remains unclear. The aim of this study is to investigate the effects of alendronate on oral keratinocytes and of low-level laser therapy (LLLT) on alendronate-treated keratinocytes, specifically by evaluating their viability, apoptosis, and wound healing function after irradiation. Oral keratinocyte cells (HaCaT) were exposed to 25 μM alendronate. Then, laser irradiation was performed with a low-level Ga-Al-As laser (λ = 808 ± 3 nm, 80 mW, and 80 mA; NDLux, Seoul, Korea) using 1.2 J/cm(2) energy dose. Viability was analyzed using MTT assay. Apoptosis was measured by Hoechst staining, caspase assay. Changes in secretion of IL-8, VEGF, and collagen type I were studied by ELISA and immunofluorescence microscopy. Scratch wound assays were also performed to measure cellular migration. Our results show that alendronate inhibits keratinocyte viability, expression of IL-8, VEGF, and collagen type I which are intimately related to healing events and cell migration while promoting apoptosis. Our results serve to demonstrate the utility of LLLT in partially overcoming the inhibitory effects of this bisphosphonate. From these results, the authors believe that the present study will provide an experimental basis for a fuller explanation of the clinical effects of LLLT as a BRONJ treatment modality.
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- 2013
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11. Three-dimensional morphometric analysis of mandibule in coronal plane after bimaxillary rotational surgery
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Jae-Min Song, Na-Rae Choi, Sung-Tak Lee, and Sang-Hun Shin
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medicine.medical_specialty ,medicine.medical_treatment ,Orthognathic surgery ,Dentistry ,Surgical planning ,Frontal reference ,V-line ,03 medical and health sciences ,0302 clinical medicine ,Medicine ,030223 otorhinolaryngology ,Radiation treatment planning ,Aesthetic mandibular outline ,Orthodontics ,Rotational surgery ,business.industry ,Research ,Mandible ,030206 dentistry ,Perioperative ,Surgery ,Plastic surgery ,Coronal plane ,Oral and maxillofacial surgery ,business - Abstract
Background The aim of this report is to present a new reference for aesthetic mandible surgery using three-dimensional cone-beam computed tomography-based treatment planning for orthognathic surgery which can be implemented in surgical planning and perioperative procedure. Methods To make an objective standard for evaluating aesthetic mandibular outline, we make an aesthetic scoring criteria with consideration of asymmetry, broad mandibular border line, and prominent mandibular angle. Two maxillofacial surgeons and two orthodontists rated their aesthetical evaluation from 1 to 5. Experimental group consisting of 47 female and 38 male patients who had rotational orthognathic two-jaw surgery from 2010 to 2011 were chosen according to aesthetic scoring done by two maxillofacial surgeons and two orthodontists. A high aesthetic score (≥16) means the facial contour is symmetric, with no broad and narrow aesthetic mandible frontal profiles. Control A group consisted of ten female and ten male patients who had no orthognathic surgery experience and low aesthetic score (≤10). Control B group consisted of ten female and ten male patients who had no orthognathic surgery experience and had anaesthetic mandibular frontal profile and a high aesthetic score (≥16). The three-dimensional image of the patient was taken from dental cone-beam CT (DCT) scanning (experimental group and control A group: 6 months DCT after surgery, control B group: 1st visit DCT). Each DCT was reformatted to reorient the 3D image using 3D analyzing program (OnDemand3D, cybermed Inc, CA, USA). After selection of 12 landmarks and the construction of reoriented horizontal, vertical, and coronal reference lines, 15 measurements were taken in 3D analysis of frontal mandibular morphology. Afterwards, horizontal and vertical linear measurements and angular measurements, linear ratio were obtained. Results Mean Go’Rt-Me’-Go’Lt angular measurement was 100.74 ± 2.14 in female patients and 105.37 ± 3.62 in male patients. These showed significant difference with control A group in both genders. Ratio of Go’Rt,Go’Lt-Me’ length to some linear measurements (ratio of Me’-Cd’RtCd’Lt to Me’-Go’RtGo’Lt, ratio of Me’-Go’ to Me’-Go’RtGo’Lt, ratio of Go’Rt-Go’Lt to Me’-Go’RtGo’Lt) showed significant difference with control A group in both genders. Conclusion This study was intended to find some standard measurement of mandible frontal view in 3D analysis of aesthetic patient. So, these potential measurement value may be helpful for orthognathic treatment planning to have more aesthetic and perspective outcomes.
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- 2016
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12. Chitin-fibroin-hydroxyapatite membrane for guided bone regeneration: micro-computed tomography evaluation in a rat model
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Sang Hun Shin, Young Jae Baek, Sang Yong Yoon, Jae-Min Song, Hong Sung Kim, and Jung Han Kim
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Guided bone regeneration ,Rat model ,Dentistry ,Fibroin ,02 engineering and technology ,03 medical and health sciences ,chemistry.chemical_compound ,Chitin-fibroin-hydroxyapatite ,0302 clinical medicine ,Chitin ,Medicine ,Bone regeneration ,Micro-computed tomography ,Rat calvarial defect ,business.industry ,Research ,Micro computed tomography ,fungi ,Collagen membrane ,030206 dentistry ,021001 nanoscience & nanotechnology ,Membrane ,chemistry ,0210 nano-technology ,business ,Biomedical engineering - Abstract
Background In guided bone regeneration (GBR) technique, many materials have been used for improving biological effectiveness by adding on membranes. The new membrane which was constructed with chitin-fibroin-hydroxyapatite (CNF/HAP) was compared with a collagen membrane (Bio-Gide®) by means of micro-computed tomography. Methods Fifty-four rats were used in this study. A critical-sized (8 mm) bony defect was created in the calvaria with a trephine bur. The CNF/HAP membrane was prepared by thermally induced phase separation. In the experimental group (n = 18), the CNF/HAP membrane was used to cover the bony defect, and in the control group (n = 18), a resorbable collagen membrane (Bio-Gide®) was used. In the negative control group (n = 18), no membrane was used. In each group, six animals were euthanized at 2, 4, and 8 weeks after surgery. The specimens were analyzed using micro-CT. Results Bone volume (BV) and bone mineral density (BMD) of the new bone showed significant difference between the negative control group and membrane groups (P
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- 2016
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13. Erratum: Dynamic changes in host gene expression associated with H5N8 avian influenza virus infection in mice
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Ok Sarah Shin, Kyudong Han, Mukesh Kumar, Jae Min Song, Young Ki Choi, Hyeok Il Kwon, Chul Joong Kim, Su-Jin Park, and Rak Kyun Seong
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0303 health sciences ,03 medical and health sciences ,0302 clinical medicine ,Multidisciplinary ,Avian influenza virus ,Host gene ,Biology ,Virology ,030217 neurology & neurosurgery ,030304 developmental biology ,Microbiology - Abstract
Emerging outbreaks of newly found, highly pathogenic avian influenza (HPAI) A(H5N8) viruses have been reported globally. Previous studies have indicated that H5N8 pathogenicity in mice is relatively moderate compared with H5N1 pathogenicity. However, detailed mechanisms underlying avian influenza pathogenicity are still undetermined. We used a high-throughput RNA-seq method to analyse host and pathogen transcriptomes in the lungs of mice infected with A/MD/Korea/W452/2014 (H5N8) and A/EM/Korea/W149/2006 (H5N1) viruses. Sequenced numbers of viral transcripts and expression levels of host immune-related genes at 1 day post infection (dpi) were higher in H5N8-infected than H5N1-infected mice. Dual sequencing of viral transcripts revealed that in contrast to the observations at 1 dpi, higher number of H5N1 genes than H5N8 genes was sequenced at 3 and 7 dpi, which is consistent with higher viral titres and virulence observed in infected lungs in vivo. Ingenuity pathway analysis revealed a more significant upregulation of death receptor signalling, driven by H5N1 than with H5N8 infection at 3 and 7 dpi. Early induction of immune response-related genes may elicit protection in H5N8-infected mice, which correlates with moderate pathogenicity in vivo. Collectively, our data provide new insight into the underlying mechanisms of the differential pathogenicity of avian influenza viruses.
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- 2016
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14. Dynamic changes in host gene expression associated with H5N8 avian influenza virus infection in mice
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Young Ki Choi, Kyudong Han, Su-Jin Park, Ok Sarah Shin, Jae Min Song, Mukesh Kumar, Chul Joong Kim, Rak Kyun Seong, and Hyeok Il Kwon
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Gene Expression Regulation, Viral ,viruses ,animal diseases ,Virulence ,Biology ,medicine.disease_cause ,Article ,Mice ,Immune system ,Orthomyxoviridae Infections ,Influenza A virus ,medicine ,Animals ,Cluster Analysis ,Gene ,Pathogen ,Regulation of gene expression ,Multidisciplinary ,Influenza A Virus, H5N1 Subtype ,Gene Expression Profiling ,Computational Biology ,High-Throughput Nucleotide Sequencing ,virus diseases ,Receptors, Death Domain ,Virology ,Influenza A virus subtype H5N1 ,Gene expression profiling ,Disease Models, Animal ,Gene Expression Regulation ,Host-Pathogen Interactions ,Female ,Interferons ,Erratum ,Transcriptome ,Signal Transduction - Abstract
Emerging outbreaks of newly found, highly pathogenic avian influenza (HPAI) A(H5N8) viruses have been reported globally. Previous studies have indicated that H5N8 pathogenicity in mice is relatively moderate compared with H5N1 pathogenicity. However, detailed mechanisms underlying avian influenza pathogenicity are still undetermined. We used a high-throughput RNA-seq method to analyse host and pathogen transcriptomes in the lungs of mice infected with A/MD/Korea/W452/2014 (H5N8) and A/EM/Korea/W149/2006 (H5N1) viruses. Sequenced numbers of viral transcripts and expression levels of host immune-related genes at 1 day post infection (dpi) were higher in H5N8-infected than H5N1-infected mice. Dual sequencing of viral transcripts revealed that in contrast to the observations at 1 dpi, higher number of H5N1 genes than H5N8 genes was sequenced at 3 and 7 dpi, which is consistent with higher viral titres and virulence observed in infected lungs in vivo. Ingenuity pathway analysis revealed a more significant upregulation of death receptor signalling, driven by H5N1 than with H5N8 infection at 3 and 7 dpi. Early induction of immune response-related genes may elicit protection in H5N8-infected mice, which correlates with moderate pathogenicity in vivo. Collectively, our data provide new insight into the underlying mechanisms of the differential pathogenicity of avian influenza viruses.
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- 2015
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15. Clinical changes of TMD and condyle stability after two jaw surgery with and without preceding TMD treatments in class III patients
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Jae-Min Song, Sang-Hun Shin, In-Kyo Chung, Sang-Yong Yoon, and Yong-Deok Kim
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Orthodontics ,Cone beam computed tomography ,medicine.medical_specialty ,Condylar stability ,Jaw Surgery ,business.industry ,Research ,medicine.medical_treatment ,TMD ,Therapeutic effect ,Orthognathic surgery ,Dentistry ,Class iii ,TMJ ,Condyle ,2 jaw surgery ,stomatognathic diseases ,Plastic surgery ,stomatognathic system ,medicine ,Oral and maxillofacial surgery ,business - Abstract
Background This study are to identify the symptomatic changes and condylar stability after 2 jaw surgery without preceding treatments for Temporomandibular joints(TMJ) in class III patients with the TMJ symptoms; and to assess therapeutic effect of 2 jaw surgery and the necessity of preceding treatment for alleviation of TMJ symptoms. Methods 30 prognathic patients with preexisting TMJ symptoms were divided into 2 groups according to presence or absence of preceding treatments before the surgery. We evaluated symptomatic changes on both TMJ by questionnaires and clinical examinations. And we reconstructed 3D cone beam computed tomography images before 2 jaw surgery, immediately after the surgery, and 6 months or more after the surgery with SimPlant software, and analyzed the stability of condylar position on 3D reconstruction model. Significances were assessed by the Wilcoxon signed rank test on SPSS ver. 20.0. Results Both groups had favorable changes of TMJ symptoms after orthognathic surgery. And postoperative position of condyle had good stability during follow-up period. Conclusion 2 jaw surgery without preceding treatments for TMD can have therapeutic effect for TMD patients with class III malocclusion.
- Published
- 2015
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