5 results on '"Nannan, Xu"'
Search Results
2. Evaluation of spatial-temporal variation performance of ERA5 precipitation data in China
- Author
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Ke Xu, Fan Yang, Nannan Xu, and Donglai Jiao
- Subjects
Mainland China ,Multidisciplinary ,Correlation coefficient ,Science ,Data assessment ,Article ,Atmosphere ,Hydrology (agriculture) ,Climatology ,Atmospheric science ,Medicine ,Environmental science ,Precipitation ,Hydrology ,Scale (map) ,China - Abstract
ERA5 is the latest fifth-generation reanalysis global atmosphere dataset from the European Centre for Medium-Range Weather Forecasts, replacing ERA-Interim as the next generation of representative satellite-observational data on the global scale. ERA5 data have been evaluated and applied in different regions, but the performances are inconsistent. Meanwhile, there are few precise evaluations of ERA5 precipitation data over long time series have been performed in Chinese mainland. This study evaluates the temporal-spatial performance of ERA5 precipitation data from 1979 to 2018 based on gridded-ground meteorological station observational data across China. The results showed that ERA5 data could capture the annual and seasonal patterns of observed precipitation in China well, with correlation coefficient values ranging from 0.796 to 0.945, but ERA5 slightly overestimated precipitation in the summer. Nonetheless, the results also showed that the accuracy of the precipitation products was strongly correlated with topographic distribution and climatic divisions. The performance of ERA5 shows spatial inherently across China that the highest correlation coefficient values locate in eastern, Northwestern and North China and the lowest biases locate in Southeast China. This study provides a reliable data assessment of the ERA5 data and precipitation trend analyses in China. The results provide accuracy references for the further use of precipitation satellite data for hydrological calculations and climate numerical simulations.
- Published
- 2021
- Full Text
- View/download PDF
3. TRIM27 Promotes Hepatitis C Virus Replication by Suppressing Type I Interferon Response
- Author
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Feng Zheng, Nannan Xu, and Yajun Zhang
- Subjects
0301 basic medicine ,Hepatitis C virus ,Immunology ,Mutant ,Regulator ,Hepacivirus ,Biology ,Virus Replication ,medicine.disease_cause ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Interferon ,Cell Line, Tumor ,medicine ,Humans ,Immunology and Allergy ,Gene knockdown ,Innate immune system ,NF-kappa B ,Nuclear Proteins ,virus diseases ,NF-κB ,Virology ,Immunity, Innate ,digestive system diseases ,DNA-Binding Proteins ,030104 developmental biology ,chemistry ,030220 oncology & carcinogenesis ,Interferon Type I ,Interferon Regulatory Factor-3 ,IRF3 ,medicine.drug - Abstract
Type I interferon (IFN) response is central for host defense against viral infection. Tripartite motif 27 (TRIM27) is implicated in antiviral innate immune response; however, whether it affects the replication of hepatitis C virus (HCV) and the underlying mechanisms remain uncharacterized. Here, we show that TRIM27 expression is induced in Huh7.5 human hepatoma cells infected with HCV or stimulated with type I IFNs in vitro. In addition, TRIM27 overexpression increases and its knockdown decreases viral RNA and protein levels, suggesting that TRIM27 positively regulates HCV replication. Mechanistically, TRIM27 inhibits type I IFN response against HCV infection through inhibiting IRF3 and NF-κB pathways, since TRIM27 mutant unable to inhibit these two inflammatory pathways fails to promote HCV replication. Taken together, this study identifies TRIM27 as a novel positive regulator of HCV replication, and also implicates that targeting TRIM27 may serve as a therapeutic strategy for controlling HCV replication.
- Published
- 2019
- Full Text
- View/download PDF
4. Building a multipurpose insertional mutant library for forward and reverse genetics in Chlamydomonas
- Author
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Kaiyao Huang, Lijuan Zhao, Xuan Deng, Wenting Ke, Xi Cheng, Xiaocui Ma, Bo Lv, Chunlei Zheng, Xiaoling Xia, Gai Liu, and Nannan Xu
- Subjects
Oil droplet ,0301 basic medicine ,Mutant ,Chlamydomonas reinhardtii ,Plant Science ,lcsh:Plant culture ,03 medical and health sciences ,Genome editing ,Genetics ,CRISPR ,lcsh:SB1-1110 ,lcsh:QH301-705.5 ,Gene ,biology ,Chlamydomonas ,biology.organism_classification ,Forward genetics ,Reverse genetics ,Mutant library ,030104 developmental biology ,lcsh:Biology (General) ,Flagella ,Intraflagellar transport ,Insertional mutants ,Biotechnology - Abstract
Background The unicellular green alga, Chlamydomonas reinhardtii, is a classic model for studying flagella and biofuel. However, precise gene editing, such as Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) and CRISPR-associated protein (Cas9) system, is not widely used in this organism. Screening of random insertional mutant libraries by polymerase chain reaction provides an alternate strategy to obtain null mutants of individual gene. But building, screening, and maintaining such a library was time-consuming and expensive. Results By selecting a suitable parental strain, keeping individual mutants using the agar plate, and designing an insertion cassette-specific primer for library screening, we successfully generated and maintained ~150,000 insertional mutants of Chlamydomonas, which was used for both reverse and forward genetics analysis. We obtained 26 individual mutants corresponding to 20 genes and identified 967 motility-defect mutants including 10 mutants with defective accumulation of intraflagellar transport complex at the basal body. We also obtained 929 mutants defective in oil droplet assembly after nitrogen deprivation. Furthermore, a new insertion cassette with splicing donor sequences at both ends was also constructed, which increased the efficiency of gene interruption. Conclusion In summary, this library provides a multifunctional platform both for obtaining mutants of interested genes and for screening of mutants with specific phenotype.
- Published
- 2017
- Full Text
- View/download PDF
5. Effects of soil moisture and light intensity on ecophysiological characteristics of Amorpha fruticosa seedlings
- Author
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Xiangfeng Tan, Xiuru Zhang, Renqing Wang, Nannan Xu, and Weihua Guo
- Subjects
biology ,Chemistry ,Forestry ,biology.organism_classification ,Photosynthesis ,Light intensity ,Horticulture ,Seedling ,Botany ,Amorpha fruticosa ,Growth rate ,Water-use efficiency ,Water content ,Transpiration - Abstract
We investigated the combined effects of soil moisture and light intensity on the growth, development and ecophysiological characteristics of one-year old Amorpha fruticosa seedlings. Soil moisture and light intensity influenced the ecophysiological characteristics of Amorpha fruticosa seedlings. Soil moisture resulted in the decreases of growth rate, individual size, net photosynthetic rate, transpiration rate, leaf water loss rate (WLR), and biomass accumulation of plant parts, and led to increased leaf water saturation deficit (WSD). Under water stress, more photosynthetic products were allocated to root growth. With decreasing light intensity, net photosynthetic rate, transpiration rate, chla/b, water saturation deficit, water use efficiency, water loss rate and biomass accumulation declined, while Chla, Chlb, Chla+b and carotenoids (Car) increased and more photosynthetic products were allocated to stem and leaf growth. Maximum growth vigor, net photosynthetic rate and total biomass accumulation in Amorpha fruticosa seedlings was recorded at 75–80% soil water-holding capacity and 100% light density in greenhouse environments.
- Published
- 2013
- Full Text
- View/download PDF
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