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Lignocellulosic biomass is a promising substrate for biogas production. However, its recalcitrant structure limits conversion efficiency. This study aims to design a microbial consortium (MC) capable of producing the cellulolytic enzyme and exploring the taxonomic and genetic aspects of lignocellulose degradation. A diverse range of lignocellulolytic bacteria and degrading enzymes from various habitats were enriched for a known KKU-MC1. The KKU-MC1 was found to be abundant in Bacteroidetes (51%), Proteobacteria (29%), Firmicutes (10%), and other phyla (8% unknown, 0.4% unclassified, 0.6% archaea, and the remaining 1% other bacteria with low predominance). Carbohydrate-active enzyme (CAZyme) annotation revealed that the genera Bacteroides,Ruminiclostridium,Enterococcus, and Parabacteroides encoded a diverse set of cellulose and hemicellulose degradation enzymes. Furthermore, the gene families associated with lignin deconstruction were more abundant in the Pseudomonas genera. Subsequently, the effects of MC on methane production from various biomasses were studied in two ways: bioaugmentation and pre-hydrolysis. Methane yield (MY) of pre-hydrolysis cassava bagasse (CB), Napier grass (NG), and sugarcane bagasse (SB) with KKU-MC1 for 5 days improved by 38–56% compared to non-prehydrolysis substrates, while MY of prehydrolysed filter cake (FC) for 15 days improved by 56% compared to raw FC. The MY of CB, NG, and SB (at 4% initial volatile solid concentration (IVC)) with KKU-MC1 augmentation improved by 29–42% compared to the non-augmentation treatment. FC (1% IVC) had 17% higher MY than the non-augmentation treatment. These findings demonstrated that KKU-MC1 released the cellulolytic enzyme capable of decomposing various lignocellulosic biomasses, resulting in increased biogas production.

This study attempted to find potential effective thermotolerant microorganisms producing complex enzymes for use in the hydrolyzing empty fruit bunch (EFB) to reduce cost of enzyme and enhance the efficiency of saccharification. The enrichment process at 45 °C was employed as a strategy to obtain four effective thermotolerant microorganisms. Streptomyces thermocarboxydus ME742, Bacillus subtilis ME751 and Bacillus amyloliquefaciens ASB/TRE produced the highest activity of xylanase (226.2 U/mL), CMCase (3.84 U/mL) and FPase (69.55 U/mL), respectively, while Aspergillus fumigatus A4112 exhibited the highest specific activity of xylanase (637.9 U/mg), CMCase (5.55 U/mg) and FPase (21.58 U/mg). Xylanase of isolated ME742 and A4112, CMCase of isolated ASB/TRE, FPase of isolated ME742, ME751 and ASB/TRE possessed thermostability with 80% remaining activity at 60 °C after 1 h incubation. These four strains were capable to reduce 49–78% (w/w) lignin in raw EFB with simultaneous enzyme production. The EFB residue was reused as substrate for saccharification with the highest amount of reducing sugar using the crude enzymes from S. thermocarboxydus ME742 (9.24 mg/g EFB). The sugar was 3.76 and 3.61 fold higher than that obtained from saccharification of acid- and alkaline-pretreated EFB, respectively. Moreover, the crude enzymes from A. fumigatus A4112 and B. amyloliquefaciens ASB/TRE hydrolyzed palm oil mill effluent (POME) to generate high yield of reducing sugar (61.01–64.63 mg/g TS-POME). Therefore, these selected strains were considered as the potent biological tool applicable in the bioconversion of oil palm biomass to fermentable reducing sugars.

The efficacy of concentrated enzymes from Trichoderma koningiopsis TM3 in hydrolyzing palm oil mill effluent (POME) and oil palm trunk residues (OPTr) at 40 and 50 °C was evaluated prior to methane fermentation. POME hydrolysate containing total sugar concentration of 15.40 g L−1 was obtained from enzymatic hydrolysis using 15 Unit g−1 TVS at 50 °C for 18 h incubation with the hydrolysis yield of 0.35 g total sugars g−1 TVS. The OPTr hydrolysate contained slightly higher total sugar concentration (18.90 g L−1) with the hydrolysis yield of 0.85 g total sugars g−1 TVS under the same condition. Methane production from POME hydrolysate was 6.29% higher than the raw POME. Co-digestion of POME hydrolysate with OPTr gave the maximum methane yield (369 ml CH4 g−1 VS-added) with the increase of 9.28% compared to the raw POME. The methane production rate (Rmax) and the hydrolysis rate constant (kh) of the co-digestion of POME hydrolysate with OPTr were 1.2-fold higher than those of the POME hydrolysate. PCR-DGGE analysis revealed that Clostridium sp. and Petrimonas sp. were dominated bacteria while Methanosarcina sp. and Methanospirillum sp. played an important role in methane production. These results indicated that enzymatic pretreatment and co-digestion of POME hydrolysate with OPTr could improve methane yield from anaerobic fermentation of POME.

Background The co-fermentation of syngas (mainly CO, H2 and CO2) and different concentrations of carbohydrate/protein synthetic wastewater to produce volatile fatty acids (VFAs) was conducted in the present study. Results It was found that co-fermentation of syngas with carbohydrate-rich synthetic wastewater could enhance the conversion efficiency of syngas and the most efficient conversion of syngas was obtained by co-fermentation of syngas with 5 g/L glucose, which resulted in 25% and 43% increased conversion efficiencies of CO and H2, compared to syngas alone. The protein-rich synthetic wastewater as co-substrate, however, had inhibition on syngas conversion due to the presence of high concentration of NH4+-N (> 900 mg/L) produced from protein degradation. qPCR analysis found higher concentration of acetogens, which could use CO and H2, was present in syngas and glucose co-fermentation system, compared to glucose solo-fermentation or syngas solo-fermentation. In addition, the known acetogen Clostridium formicoaceticum, which could utilize both carbohydrate and CO/H2 was enriched in syngas solo-fermentation and syngas with glucose co-fermentation. In addition, butyrate was detected in syngas and glucose co-fermentation system, compared to glucose solo-fermentation. The detected n-butyrate could be converted from acetate and lactate/ethanol which produced from glucose in syngas and glucose co-fermentation system supported by label-free quantitative proteomic analysis. Conclusions These results demonstrated that the co-fermentation with syngas and carbohydrate-rich wastewater could be a promising technology to increase the conversion of syngas to VFAs. In addition, the syngas and glucose co-fermentation system could change the degradation pathway of glucose in co-fermentation and produce fatty acids with longer carbon chain supported by microbial community and label-free quantitative proteomic analysis. The above results are innovative and lead to achieve effective conversion of syngas into VFAs/longer chain fatty acids, which would for sure have a great interest for the scientific and engineering community. Furthermore, the present study also used the combination of high-throughput sequencing of 16S rRNA genes, qPCR analysis and label-free quantitative proteomic analysis to provide deep insights of the co-fermentation process from the taxonomic and proteomic aspects, which should be applied for future studies relating with anaerobic fermentation.