12 results on '"Weibin Xie"'
Search Results
2. Identification and validation of tumor-infiltrating lymphocyte-related prognosis signature for predicting prognosis and immunotherapeutic response in bladder cancer
- Author
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Canxuan Li and Weibin Xie
- Subjects
Structural Biology ,Applied Mathematics ,Molecular Biology ,Biochemistry ,Computer Science Applications - Abstract
Background It has been discovered that tumor-infiltrating lymphocytes (TILs) are essential for the emergence of bladder cancer (BCa). This study aimed to research TIL-related genes (TILRGs) and create a gene model to predict BCa patients' overall survival. Methods The RNA sequencing and clinical data were downloaded from the TGCA and GEO databases. Using Pearson correlation analysis, TILRGs were evaluated. Moreover, hub TILRGs were chosen using a comprehensive analysis. By dividing the TCGA-BCa patients into different clusters based on hub TILRGs, we were able to explore the immune landscape between different clusters. Results Here, we constructed a model with five hub TILRGs and split all of the patients into two groups, each of which had a different prognosis and clinical characteristics, TME, immune cell infiltration, drug sensitivity, and immunotherapy responses. Better clinical results and greater immunotherapy sensitivity were seen in the low-risk group. Based on five hub TILRGs, unsupervised clustering analysis identify two molecular subtypes in BCa. The prognosis, clinical outcomes, and immune landscape differed in different subtypes. Conclusions The study identifies a new prediction signature based on genes connected to tumor-infiltrating lymphocytes, providing BCa patients with a new theoretical target.
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- 2023
3. Metal-free reduction of CO2 to formate using a photochemical organohydride-catalyst recycling strategy
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Weibin Xie, Jiasheng Xu, Ubaidah Md Idros, Jouji Katsuhira, Masaaki Fuki, Masahiko Hayashi, Masahiro Yamanaka, Yasuhiro Kobori, and Ryosuke Matsubara
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General Chemical Engineering ,Synthetic chemistry methodology ,General Chemistry ,Photocatalysis - Published
- 2023
4. Experimental Study on the Mechanical Characteristics of Single-Fissure Sandstone Under Triaxial Extension
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Zelin Liu, Chunde Ma, Xin’ao Wei, and Weibin Xie
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Geology ,Geotechnical Engineering and Engineering Geology ,Civil and Structural Engineering - Published
- 2022
5. Experimental Study of Rock Subjected to Triaxial Extension
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Chunde Ma, Zelin Liu, Weibin Xie, and Xin’ao Wei
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Geology ,Geotechnical engineering ,Extension (predicate logic) ,Geotechnical Engineering and Engineering Geology ,Civil and Structural Engineering - Published
- 2021
6. Genetic diversity and population structure of masson pine (Pinus massoniana Lamb.) superior clones in South China as revealed by EST-SSR markers
- Author
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Lina Mei, Xiaopeng Wen, Zhangqi Yang, Fan Fuhua, Yonghui Hong, and Weibin Xie
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0106 biological sciences ,0301 basic medicine ,Germplasm ,Genetic diversity ,education.field_of_study ,Pinus massoniana ,biology ,Population ,UPGMA ,food and beverages ,Plant Science ,biology.organism_classification ,01 natural sciences ,Gene flow ,03 medical and health sciences ,030104 developmental biology ,Evolutionary biology ,Genetic variation ,Genetic structure ,Genetics ,education ,Agronomy and Crop Science ,Ecology, Evolution, Behavior and Systematics ,010606 plant biology & botany - Abstract
Masson pine (Pinus massoniana Lamb.) is one of the most economically important and widely distributed forest species in China. Understanding the genetic diversity and population structure of masson pine germplasms has crucial significance to effective collection, conservation, and utilization of the resource. In the present study, we explored the characteristics of the genetic diversity (H) and genetic structure between three typical seed orchards in South China and revealed the degree of genetic differentiation between different economic superior traits by 24 EST-SSR molecular markers. All the loci were polymorphic and showed several alleles per locus with a mean of 6 alleles and 168 rare alleles in the population. The mean value of polymorphism information content (PIC) was 0.7011, which indicated that the markers were informative. There were moderate genetic differentiation and genetic diversities (H) among the masson pine subpopulations. Most of the genetic variation existed within the population, and only a small part existed among the populations. However, although the genetic differentiation among populations only accounted for a small part, significant differences in pairwise genetic differentiation in different subpopulations occurred. And the estimated value of the migration coefficient indicated a low gene flow in our populations. STRUCTURE analysis showed 3 clusters grouped similar to the Unweighted Pair Group Method with Arithmetic (UPGMA) clustering and principal coordinates analysis (PCoA). The clusters were neither strictly classified by geographical region nor classified according to the traits, especially for the FG-NN group had a relatively pure structure. These results provided comprehensive information about the collection and protection of these valuable masson pine germplasm resources in southern China.
- Published
- 2021
7. Microstructure and strengthening mechanisms of CuCrZr alloy by two-step thermomechanical treatment
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Hang Wang, Huiming Chen, Bin Yang, Weibin Xie, Shiha Huang, and Wei Huang
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010302 applied physics ,Materials science ,Alloy ,engineering.material ,Condensed Matter Physics ,Microstructure ,01 natural sciences ,Indentation hardness ,Atomic and Molecular Physics, and Optics ,Grain size ,Electronic, Optical and Magnetic Materials ,Precipitation hardening ,0103 physical sciences ,Ultimate tensile strength ,engineering ,Electrical and Electronic Engineering ,Composite material ,Dislocation ,Strengthening mechanisms of materials - Abstract
The high strength obtained in Cu–Cr alloys is mainly attributed to the precipitation strengthening, dislocation strengthening, and grain-boundary strengthening. The precipitate size, dislocation density, and grain size are related to thermomechanical treatment. The strength of Cu–Cr alloys can be controlled by the thermomechanical treatment process. In this study, the microstructure and strengthening mechanisms of Cu–0.8Cr–0.1Zr (wt%) alloy after one-step and two-step thermomechanical treatment were studied. The results showed that after the following thermomechanical treatments, solution treated at 950 °C for 60 min, thickness reduction at first cold rolled for 60%, annealed at 450 °C for 180 min, and then 30% thickness reduction in secondary cold rolling, the microhardness, tensile strength, and conductivity reach 215 HV, 623 MPa, and 74.5% IACS, respectively. The main difference of strength between one-step and two-step thermomechanical treatment in the Cu–0.8Cr–0.1Zr alloy is due to the difference of dislocation strengthening effect. The dislocation strengthening achieved in two-step thermomechanical treatment (175.6 MPa) is 95 MPa greater than that of one-step thermomechanical treatment (80.6 MPa).
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- 2020
8. The Effect of Precipitation Characteristics on Hardening Behavior in Cu–Cr–Sn Alloy with Sn Variation
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Weibin Xie, Fuxin Luo, Luo Zeyu, Bin Yang, Huiming Chen, and Hang Wang
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Materials science ,Precipitation (chemistry) ,Alloy ,Metals and Alloys ,Nucleation ,02 engineering and technology ,engineering.material ,Condensed Matter Physics ,Microstructure ,030226 pharmacology & pharmacy ,03 medical and health sciences ,Solid solution strengthening ,020303 mechanical engineering & transports ,0302 clinical medicine ,Precipitation hardening ,0203 mechanical engineering ,Mechanics of Materials ,Vickers hardness test ,Materials Chemistry ,Ceramics and Composites ,Hardening (metallurgy) ,engineering ,Composite material - Abstract
The influence of minor solute additions of Sn on hardening behavior and microstructure evolution of the Cu–Cr–Sn alloys has been investigated with help of an optical microscope, scanning electron microscope, transmission electron microscopy, and the Vickers hardness tester. Experimental results show that the Sn solutes, homogeneously distributed within the Cu matrix, provide a weak solid solution strengthening effect in the Cu–Cr–Sn alloy, nevertheless are important in enhancing precipitation hardening. The Cu–0.43Cr–0.36Sn alloy exhibits a significant age-hardening effect with a hardness increase by 62 HV after peak aging at 450°C, which is stronger than that of the Cu–0.43Cr–0.08Sn and the Cu–0.43Cr–0.17Zr–0.05Mg–0.1RE alloys. A trace amount of Sn is highly effective at suppressing the transformation of the Cr-rich phase from the face-centered cubic (FCC) into the body-centered cubic (BCC) structure in the Cu–Cr alloys during the aging process, and therefore the FCC Cr-rich precipitate is the dominant strengthening phase in the Cu–Cr–Sn alloys. Besides, a higher areal number density of Cr-rich precipitates (~4.2 · 1015 m–2) was observed in peak-aging Cu–0.43Cr–0.36Sn alloy as compared to Cu–0.43Cr–0.08Sn alloy, which shows that the adding Sn to Cu–Cr alloy can accelerate the nucleation of the Cr-rich precipitates. The improvement of precipitation hardening and hardening kinetics in the Cu–0.43Cr–0.36Sn alloy is mainly attributed to the acceleration in the nucleation of Cr-rich precipitates through Sn addition.
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- 2020
9. Development of a radiomics model to diagnose pheochromocytoma preoperatively: a multicenter study with prospective validation
- Author
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Jianqiu Kong, Junjiong Zheng, Jieying Wu, Shaoxu Wu, Jinhua Cai, Xiayao Diao, Weibin Xie, Xiong Chen, Hao Yu, Lifang Huang, Hongpeng Fang, Xinxiang Fan, Haide Qin, Yong Li, Zhuo Wu, Jian Huang, and Tianxin Lin
- Subjects
Radiomics ,Research ,Adrenal Gland Neoplasms ,Pheochromocytoma ,General Medicine ,Nomogram ,General Biochemistry, Genetics and Molecular Biology ,Nomograms ,Magnetic resonance imaging ,Humans ,Medicine ,Prediction ,Retrospective Studies - Abstract
Background Preoperative diagnosis of pheochromocytoma (PHEO) accurately impacts preoperative preparation and surgical outcome in PHEO patients. Highly reliable model to diagnose PHEO is lacking. We aimed to develop a magnetic resonance imaging (MRI)-based radiomic-clinical model to distinguish PHEO from adrenal lesions. Methods In total, 305 patients with 309 adrenal lesions were included and divided into different sets. The least absolute shrinkage and selection operator (LASSO) regression model was used for data dimension reduction, feature selection, and radiomics signature building. In addition, a nomogram incorporating the obtained radiomics signature and selected clinical predictors was developed by using multivariable logistic regression analysis. The performance of the radiomic-clinical model was assessed with respect to its discrimination, calibration, and clinical usefulness. Results Seven radiomics features were selected among the 1301 features obtained as they could differentiate PHEOs from other adrenal lesions in the training (area under the curve [AUC], 0.887), internal validation (AUC, 0.880), and external validation cohorts (AUC, 0.807). Predictors contained in the individualized prediction nomogram included the radiomics signature and symptom number (symptoms include headache, palpitation, and diaphoresis). The training set yielded an AUC of 0.893 for the nomogram, which was confirmed in the internal and external validation sets with AUCs of 0.906 and 0.844, respectively. Decision curve analyses indicated the nomogram was clinically useful. In addition, 25 patients with 25 lesions were recruited for prospective validation, which yielded an AUC of 0.917 for the nomogram. Conclusion We propose a radiomic-based nomogram incorporating clinically useful signatures as an easy-to-use, predictive and individualized tool for PHEO diagnosis.
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- 2022
10. Study on the Hot Deformation Behavior and Microstructure Evolution of Cu-Cr-In Alloy
- Author
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Haigen Wei, Weibin Xie, Bin Yang, Huiming Chen, Huaichao Peng, Hang Wang, and Pengzhe Gao
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010302 applied physics ,Materials science ,Mechanical Engineering ,Alloy ,Constitutive equation ,technology, industry, and agriculture ,02 engineering and technology ,Strain rate ,engineering.material ,Atmospheric temperature range ,equipment and supplies ,021001 nanoscience & nanotechnology ,Microstructure ,01 natural sciences ,Stress (mechanics) ,Equivalent stress ,Mechanics of Materials ,0103 physical sciences ,engineering ,General Materials Science ,Composite material ,Deformation (engineering) ,0210 nano-technology - Abstract
Based on the hot compressive tests in the temperature range of 700-900 °C and strain rate range of 0.01-10 s−1, the hot deformation behavior of a Cu-Cr-In alloy was investigated. The true stress–strain curves of the alloy were obtained, and a constitutive equation for the alloy was established by the method of equivalent stress. The processing maps were constructed based on the constitutive equation, and the microstructural evolutions were analyzed and correlated with the processing maps. The results show that the true stress of the alloy increased with decreasing strain rate and decreased with increasing temperature. The microstructures of the alloy deformed under different conditions were in good accordance with the processing maps results. According to the processing maps and the microstructures of the alloy with true strains of 0.4 and 0.8, the optimal hot deformation conditions lie in the range of 850-900 °C and strain rate range of 0.01-0.1 s−1.
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- 2019
11. Correction to: Circular RNA circ-ZKSCAN1 inhibits bladder cancer progression through miR-1178-3p/p21 axis and acts as a prognostic factor of recurrence
- Author
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Junming Bi, Hongwei Liu, Wei Dong, Weibin Xie, Qingqing He, Zijian Cai, Jian Huang, and Tianxin Lin
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Male ,Cancer Research ,lcsh:RC254-282 ,Mice ,Cell Movement ,Cell Line, Tumor ,Biomarkers, Tumor ,Animals ,Humans ,Aged ,Cell Proliferation ,Neoplasm Staging ,Aged, 80 and over ,Correction ,Zinc Fingers ,RNA, Circular ,Middle Aged ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Prognosis ,Gene Expression Regulation, Neoplastic ,MicroRNAs ,Urinary Bladder Neoplasms ,Oncology ,Molecular Medicine ,Female ,RNA Interference ,Neoplasm Grading - Abstract
Circular RNAs (circRNAs) represent a subclass of regulatory RNAs that have been shown to have significant regulatory roles in cancer progression. However, the biological functions of circRNAs in bladder cancer (BCa) are largely unknown.Cell invasion models were established, and invasion-related circRNAs were detected by qPCR. Using above method, circ-ZKSCAN1 was picked out for further study. Circ-ZKSCAN1 expression and survival analyses were performed through qPCR. The survival curves were generated by the Kaplan-Meier method, and the log-rank test was used to assess the significance. Cell proliferation, migration and invasion were examined to investigate the function of circ-ZKSCAN1. Tumorigenesis in nude mice was assessed to determine the effect of circ-ZKSCAN1 in bladder cancer. Biotin-coupled probe pull-down assays, FISH and luciferase reporter assays were conducted to confirm the relationship between circ-ZKSCAN1 and microRNA. RNA-seq revealed different molecular changes in downstream genes.Here, we found that circ-ZKSCAN1 was downregulated in BCa tissues and cell lines. Circ-ZKSCAN1 levels were associated with survival, tumor grade, pathological T stage and tumor recurrence. Overexpressed circ-ZKSCAN1 inhibits cell proliferation, migration, invasion and metastasis in vitro and in vivo. Mechanistically, we demonstrated that circ-ZKSCAN1 upregulated p21 expression by sponging miR-1178-3p, which suppressed the aggressive biological behaviors in bladder cancer.These results reveal that Circ-ZKSCAN1 acts as a tumor suppressor via a novel circ-ZKSCAN1/miR-1178-3p/p21 axis, which have the important role in the proliferation, migration and invasion ablitities of BCa cells and provide a novel perspective on circRNAs in BCa progression.
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- 2020
12. Upregulated WDR5 promotes proliferation, self-renewal and chemoresistance in bladder cancer via mediating H3K4 trimethylation
- Author
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Qingqing Cai, Jian Huang, Wang He, Weibin Xie, Peng Gu, Xu Chen, Tianxin Lin, Bo Wang, Yun Xie, Guangzheng Zhong, and Wen Dong
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Male ,Homeobox protein NANOG ,Antineoplastic Agents ,Bioinformatics ,Methylation ,Article ,Histones ,Cell Line, Tumor ,Animals ,Humans ,WDR5 ,Medicine ,MCL1 ,Cell Self Renewal ,Cyclin B1 ,Aged ,Cell Proliferation ,Neoplasm Staging ,Aged, 80 and over ,Cisplatin ,Multidisciplinary ,Bladder cancer ,business.industry ,Intracellular Signaling Peptides and Proteins ,Cell Cycle Checkpoints ,Histone-Lysine N-Methyltransferase ,Middle Aged ,medicine.disease ,Immunohistochemistry ,Tumor Burden ,Disease Models, Animal ,Cyclin E1 ,Cell Transformation, Neoplastic ,Cyclin E2 ,Urinary Bladder Neoplasms ,Drug Resistance, Neoplasm ,Case-Control Studies ,Gene Knockdown Techniques ,Lymphatic Metastasis ,Cancer research ,Female ,Neoplasm Grading ,business ,medicine.drug - Abstract
WD repeat domain 5 (WDR5) plays an important role in various biological functions through the epigenetic regulation of gene transcription; however, its role in bladder cancer remains largely unknown. Our study investigated the role of WDR5 in bladder cancer and demonstrated that WDR5 was upregulated in bladder cancer tissues and elevated WDR5 protein levels positively correlated with advanced tumor stage and poor survival. Through gain or loss of function, we demonstrated that WDR5 promoted proliferation, self-renewal and chemoresistance to cisplatin in bladder cancer cells in vitro and tumor growth in vivo. Mechanistically, WDR5 regulated various functions in bladder cancer by mediating the transcription of cyclin B1, cyclin E1, cyclin E2, UHMK1, MCL1, BIRC3 and Nanog by histone H3 lysine 4 trimethylation. Therefore, we have discovered that WDR5 plays an important role in bladder cancer suggesting that WDR5 is a potential biomarker and a promising target in the treatment of bladder cancer.
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- 2015
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