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White celery (Apium graveolens L.), a variety of common celery, is an important leafy vegetable in the Apiaceae family and is famous for its nutritional value. However, limited work has been devoted to quality formation and regulation in white celery. In this study, four white celery varieties, 'Xuebaiqincai', 'Saixue', 'Baiganshiqin' and 'Ruixue', were selected and analyzed for the comparison of ascorbic acid (AsA) and lignin levels, which are two important quality evaluation indicators in celery. The expression levels of the genes involved in AsA and lignin metabolic pathways were also detected. In the leaf blades, the AsA content was highest in 'Xuebaiqincai' compared with other varieties, whereas the most abundant AsA levels in the petioles were observed in 'Baiganshiqin' and 'Ruixue'. The expression levels of AsA-related genes varied among the studied varieties. The highest level was detected in 'Xuebaiqincai', whereas other varieties exhibited relatively lower levels. The lignin content in the leaf blades was lower than that in the petioles. Correspondingly, the transcript profiles of genes involved in lignin biosynthesis were in accordance with the different levels in the petioles and blades. The results of this study provide potentially useful information for white celery breeding aimed at quality improvement and regulation. [ABSTRACT FROM AUTHOR]

Increasing the level of AsA and maintaining proper lignin content will improve the quality of celery (Apium graveolens L.). However, the study on the regulation mechanism of genes related to AsA and lignin metabolism in celery was limited, especially in yellow celery. In this study, the accumulation of AsA and lignin and the expression profiles of related-genes were detected in three kinds of yellow celery. The results showed that the content of AsA was higher in the leaf blades of 'Huangtaiji' and the petioles of 'Jinhuangqincai'. The content of lignin was the highest in 'Jinhuangqincai' leaves, followed by 'Liuhehuangxinqin' and 'Huangtaiji'. The expression levels of AgAO (r = −0.032) and AgDHAR1 (r = −0.193) genes involved in AsA recycling and degradation showed negatively correlated with AsA content. AgCCoAOMT (r = 0.692) and AgF5 H (r = 0.733) genes expression were positively correlated with lignin content, while the expression of AgCAD (r = −0.694) and AgC3ʹH (r = −0.722) genes were negatively correlated with lignin content. Our current work provided potential theoretical basis for effectively changing accumulation of AsA and lignin by genetic engineering in celery. [ABSTRACT FROM AUTHOR]

Celery (Apium graveolens L.) is one of the most important vegetables in the Apiaceae family, rich in nutrients and widely grown around the world. bZIP transcription factors family plays an important role in the transcription regulation of plant growth and development, as well as adaptation to the external environment. In this paper, 62 bZIP family transcription factors were screened and identified based on the whole genome sequence of celery. The bZIP proteins of celery and Arabidopsis thaliana were divided into 10 subfamilies according to the phylogenetic tree. Phylogenetic and evolutionary analysis showed that the number of bZIP family members gradually expanded from lower plants to higher plants during the long evolution process. Based on the homology of celery and A. thaliana bZIP genes, the interaction network between celery bZIP transcription factors and other proteins in the genome was constructed, and the correlation data of protein interaction were also obtained. The expression profiles of 12 selected AgbZIP genes were detected and analyzed under abiotic stress treatments and different tissues using RT-qPCR. The results showed that AgbZIP can respond to high temperature, low temperature, drought, and high salt stress. [ABSTRACT FROM AUTHOR]

Biotic stress is one of the key factors that restrict the growth and development of plants. Fruit crops are mostly perennial, so they are more seriously endangered by biotic stress. Plant responses to different types of biotic stresses such as pathogens and insects are controlled by a very complex regulatory and defense system. High-throughput sequencing (next-generation sequencing) has brought powerful research strategies and methods to the research fields of genomics and post-genomics. Functional genomics, transcriptomics, proteomics, metabolomics, and deep-sequencing of small RNAs provides a new path to better understand the complex regulatory and defense systems behind biotic stress in plants. In this review, we summarized recent progresses in research on fruit crops responses to biotic stress using genomics, transcriptomics, proteomics, metabolomics, and deep-sequencing approaches. This paper also summarized the information of SNP marker resources and the transcription factors that are involved in the regulation of biotic stress responses obtained from genome sequencing, and discusses the differential expression of related genes and proteins identified by transcriptome and proteome sequencing. At the same time, the roles of signaling pathways and metabolites involved in plant biotic stress revealed by the metabolome have also been discussed. In addition, the application of small RNA deep sequencing in the study of fruit crop response to biotic stress has also been included in this review. These omics and deep sequencing methods will greatly support the biotic resistance-resistant breeding of fruit crops. [ABSTRACT FROM AUTHOR]