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The nonrandom association between landscape characteristics and the dominant life history strategies observed in species pools is a typical pattern in nature. Here, we argue that these associations determine predictable changes in the relative importance of assembly mechanisms along broadscale geographic gradients (i.e., the geographic context of metacommunity dynamics). To demonstrate that, we employed simulation models in which groups of species with the same initial distribution of niche breadths and dispersal abilities interacted across a wide range of landscapes with contrasting characteristics. By assessing the traits of dominant species in the species pool in each landscape type, we determined how different landscape characteristics select for different life history strategies at the metacommunity level. We analyzed the simulated data using the same analytical approaches used in the study of empirical metacommunities to derive predictions about the causal relationships between landscape characteristics and dominant life histories in species pools, as well as their reciprocal influence on empirical inferences regarding the assembly process. We provide empirical support for these predictions by contrasting the assembly of moth metacommunities in a tropical versus a temperate mountainous landscape. Together, our model framework and empirical analyses demonstrate how the geographic context of metacommunities influences our understanding of community assembly across broadscale ecological gradients. [ABSTRACT FROM AUTHOR]

Studies on beta diversity across different spatial scales can yield insight into the ecological factors that shape communities and the mechanisms of maintenance and loss of diversity. The coastal rivers in southeast Brazil have different lengths and salinity gradients because of variation in coastal plain width and slope. These differences in environmental characteristics promote natural gradients and patterns of macrophyte assemblage variation within and among rivers. To investigate the drivers of macrophyte beta diversity, we recorded the occurrence of species and life forms and collected limnological variables at 100 sampling sites over 8 unconnected rivers that run directly to the sea. We estimated macrophyte beta diversity, and its nestedness and turnover components, within (local scale) and among (regional scale) coastal rivers using traditional metrics (Jaccard dissimilarity matrix) and a metric that accounts for sampling effect (permutational analysis of multivariate dispersions). At each sampling site, we collected variables from water (nutrients, dissolved oxygen, and pH), sediment (nutrients, salinity, and grain type), and channel (width, littoral declivity, distance from river's mouth, and coastline). For assessment of regional-scale drivers of macrophyte beta diversity, we measured river length and calculated salinity gradient. We evaluated the potential of environmental variables to explain local and regional beta diversity using distance-based redundancy analysis and multiple linear regression. As expected, at the local scale, high species turnover and life-form nestedness were predominantly explained by the rivers' longitudinal gradients (mainly salinity, P, and channel width). At the regional scale, we found that river length explained life-form nestedness among rivers (small rivers are subsets of the largest rivers); however, neither river length nor salinity gradient explained the high species turnover among rivers. We suggest that dispersal limitation among rivers and historical colonization shaped the species pool in each river resulting in almost completely distinct assemblage compositions. This high turnover at the regional scale suggests that conservation strategies for macrophytes must consider multiple rivers and not only the largest ones. Overall, our results suggest that environmental variation strongly influences macrophyte beta diversity within and among coastal tropical rivers. [ABSTRACT FROM AUTHOR]

Despite the rich biodiversity found in nature, it is unclear to what extent some combinations of interacting species, while conceivable in a given place and time, may never be realized. Yet solving this problem is important for understanding the role of randomness and predictability in the assembly of ecological communities. Here we show that the specific combinations of interacting species that emerge from the ecological dynamics within regional species pools are not all equally likely to be seen; rather, they are among the most likely to persist under changing environments. First, we use niche-based competition matrices and Lotka-Volterra models to demonstrate that realized combinations of interacting species are more likely to persist under random parameter perturbations than the majority of potential combinations with the same number of species that could have been formed from the regional pool. We then corroborate our theoretical results using a 10-year observational study, recording 88 plant-herbivore communities across three different forest successional stages. By inferring and validating plant-mediated communities of competing herbivore species, we find that observed combinations of herbivores have an expected probability of species persistence higher than half of all potential combinations. Our findings open up the opportunity to establish a formal probabilistic and predictive understanding of the composition of ecological communities. [ABSTRACT FROM AUTHOR]

In hydromorphologically-degraded lowland streams, large-wood reintroductions are often used to re-establish instream physical structure, which might also increase biodiversity. However, the success rate of this approach varies in terms of positive macroinvertebrate assemblage responses. To obtain better insight into macroinvertebrate–wood relationships, we studied macroinvertebrate assemblage composition and its associated ecological and functional traits in 3 lowland streams in The Netherlands where wood was reintroduced. We used a before–after control–impact design in which we studied stream sections in 3 y: 1 y before and 2 y after large wood was added to some stream sections but not others. We recorded changes in physical structure expressed as substrate diversity, complexity, patchiness, and stability and then compared these parameters within and among the control and treated sections in each stream. We also sampled macroinvertebrates to determine whether the assemblage composition changed because of the wood addition. Finally, we assessed whether changes in macroinvertebrate assemblage could be related to taxa preferences for substrate type and flow and to their functional traits related to mode of locomotion and feeding type. Habitat heterogeneity increased after the wood additions and was relatively stable between years. Macroinvertebrate assemblages changed relative to the control sections in the 2 y after introduction, with 50 to 58% of the taxa increasing or decreasing significantly in abundance. Despite the changes in substrate composition and habitat heterogeneity, most of the functional relationships we expected between macroinvertebrates and large wood were either not apparent or site specific. The only characteristic shared by the macroinvertebrates that consistently increased in response to wood additions was a high affinity for hard substrates. In 1 stream we also observed an increase in taxa with a preference for high-flow velocity and a grazer–scraper feeding mode. These findings suggest that an increase in the surface area of stable, hard substrate was the main underlying ecological effect of reintroducing large wood to the stream channel of sand-bed lowland streams, at least in the short term, and that this change only affected a specific part of the macroinvertebrate assemblage. Changes in assemblage composition occurred primarily during the 1st y after the wood additions and decreased between the 1st and 2nd y, so colonization in this early successional stage seems to be limited to the species pool present in the immediate surroundings. [ABSTRACT FROM AUTHOR]

Human-mediated species invasion and climate change are leading to global extinctions and are predicted to result in the loss of important axes of phylogenetic and functional diversity. However, the long-term robustness of modern communities to invasion is unknown, given the limited timescales over which they can be studied. Using the fossil record of the Paleocene-Eocene thermal maximum (PETM; ∼56 Ma) in North America, we evaluate mammalian community-level response to a rapid global warming event (5°–8°C) and invasion by three Eurasian mammalian orders and by species undergoing northward range shifts. We assembled a database of 144 species body sizes and created a time-scaled composite phylogeny. We calculated the phylogenetic and functional diversity of all communities before, during, and after the PETM. Despite increases in the phylogenetic diversity of the regional species pool, phylogenetic diversity of mammalian communities remained relatively unchanged, a pattern that is invariant to the tree dating method, uncertainty in tree topology, and resolution. Similarly, body size dispersion and the degree of spatial taxonomic turnover of communities remained similar across the PETM. We suggest that invasion by new taxa had little impact on Paleocene-Eocene mammal communities because niches were not saturated. Our findings are consistent with the numerous studies of modern communities that record little change in community-scale richness despite turnover in taxonomic composition during invasion. What remains unknown is whether long-term robustness to biotic and abiotic perturbation are retained by modern communities given global anthropogenic landscape modification. [ABSTRACT FROM AUTHOR]

Metacommunity theory and its constituent theory of island biogeography (TIB) have the potential to unify ecology across different scales. The TIB has been successful in predicting alpha diversity patterns, such as species-area relationships and species-abundance distributions, but lags behind in predicting spatial beta diversity patterns. In this study we use island biogeography theory as the starting point to integrate spatial beta diversity patterns into metacommunity theory. We first derive theoretical predictions for the expected beta diversity patterns under the classic MacArthur and Wilson framework, where all species have equal colonization and extinction rates. We then test these predictions for the avian community composition of 42 islands (and 93 species) in Thousand Island Lake, China. Our theoretical results corroborate that longer distance and smaller area lead to higher beta diversity and further reveal that pairwise beta diversity is independent of the size of the mainland species pool. We also find that for the partitioned pairwise beta diversity components, the turnover component increases with the ratio of extinction rates and colonization rates, while the nestedness component is a unimodal function of the ratio of extinction rates and colonization rates. For the empirical island system, we find that beta diversity patterns better distinguish a species-equivalent model from a species-nonequivalent model than alpha diversity patterns. Our findings suggest that beta diversity patterns provide a powerful tool in detecting nonneutral processes, and our model has the potential to incorporate more biological realism in future analyses. [ABSTRACT FROM AUTHOR]

The high number of freshwater species at low salinity and the correspondingly high number of marine species at high salinity enveloping a conspicuous richness minimum at intermediate salinities has shaped our basic understanding of biodiversity along a coastal salinity gradient for almost 80 years. Visualized as the Remane curve, this iconic concept was originally based on sedentary macroinvertebrates in the Baltic Sea. To what extent the concept can be generalized, particularly to free-drifting organisms, is currently debated. Here we use approximately 16,000 phytoplankton samples from two large coastal ecosystems—the Baltic Sea and Chesapeake Bay—to analyze the relationship between salinity and phytoplankton species richness. Alpha diversity showed a consistent variation along the salinity gradient, with a minimum at mesohaline salinities of around 7–9. Rarefied species pools at narrow salinity intervals also showed reduced diversity at intermediate salinities, surrounded by high richness toward both ends of the gradient. The cumulative likelihood of species presence validated the minimum at intermediate salinities. Community composition changed abruptly at the α diversity minimum in the Baltic Sea, while it changed gradually along the salinity gradient in Chesapeake Bay. We conclude that the Remane concept is in every respect valid for phytoplankton. [ABSTRACT FROM AUTHOR]

Convergence occurs in both species traits and community structure, but how convergence at the two scales influences each other remains unclear. To address this question, we focus on tropical forest monodominance, in which a single, often ectomycorrhizal (EM) tree species occasionally dominates forest stands within a landscape otherwise characterized by diverse communities of arbuscular mycorrhizal (AM) trees. Such monodominance is a striking potential example of community divergence resulting in alternative stable states. However, it is observed only in some tropical regions. A diverse suite of AM and EM trees locally codominate forest stands elsewhere. We develop a hypothesis to explain this geographical difference using a simulation model of plant community assembly. Simulation results suggest that in a region with a few EM species (e.g., South America), EM trees experience strong selection for convergent traits that match the abiotic conditions of the environment. Consequently, EM species successfully compete against other species to form monodominant stands via positive plant-soil feedbacks. By contrast, in a region with many EM species (e.g., Southeast Asia), species maintain divergent traits because of complex plant-soil feedbacks, with no species having traits that enable monodominance. An analysis of plant trait data from Borneo and Peruvian Amazon was inconclusive. Overall, this work highlights the utility of geographical comparison in understanding the relationship between trait convergence and community convergence. [ABSTRACT FROM AUTHOR]

The maintenance of species diversity occurs at the regional scale but depends on interacting processes at the full range of lower scales. Although there is a long history of study of regional diversity as an emergent property, analyses of fully multiscale dynamics are rare. Here, we use scale transition theory for a quantitative analysis of multiscale diversity maintenance with continuous scales of dispersal and environmental variation in space and time. We develop our analysis with a model of a linear habitat, applicable to streams or coastlines, to provide a theoretical foundation for the long-standing interest in environmental variation and dispersal, including downstream drift. We find that the strength of regional coexistence is strongest when local densities and local environmental conditions are strongly correlated. Increasing dispersal and shortening environmental correlations weaken the strength of coexistence regionally and shift the dominant coexistence mechanism from fitness-density covariance to the spatial storage effect, while increasing local diversity. Analysis of the physical and biological determinants of these mechanisms improves understanding of traditional concepts of environmental filters, mass effects, and species sorting. Our results highlight the limitations of the binary distinction between local communities and a species pool and emphasize species coexistence as a problem of multiple scales in space and time. [ABSTRACT FROM AUTHOR]

A persistent challenge in ecology is to tease apart the influence of multiple processes acting simultaneously and interacting in complex ways to shape the structure of species assemblages. We implement a heuristic approach that relies on explicitly defining species pools and permits assessment of the relative influence of themain processes thought to shape assemblage structure: environmental filtering, dispersal limitations, and biotic interactions. We illustrate our approach using data on the assemblage composition and geographic distribution of hummingbirds, a comprehensive phylogeny and morphological traits. The implementation of several process-based species pool definitions in null models suggests that temperature—but not precipitation or dispersal limitation—acts as the main regional filter of assemblage structure. Incorporating this environmental filter directly into the definition of assemblage-specific species pools revealed an otherwise hidden pattern of phylogenetic evenness, indicating that biotic interactions might further influence hummingbird assemblage structure. Such hidden patterns of assemblage structure call for a reexamination of a multitude of phylogenetic- and trait-based studies that did not explicitly consider potentially important processes in their definition of the species pool. Our heuristic approach provides a transparent way to explore patterns and refine interpretations of the underlying causes of assemblage structure. [ABSTRACT FROM AUTHOR]

Differences in trait composition, or functional structure, of assemblages across spatial scales may stem from the ability to tolerate local conditions (environmental filters) and from assembly rules (biological filters). However, disentangling their respective roles has proven difficult, and limited generalities have emerged from research on the spatial scaling of functional structure. Here we quantify differences in trait composition among 679 spatially nested (i.e., paired regional pool and local community) bird and mammal assemblages worldwide. Among the regional pool, we identify species with trait combinations within the range observed locally as the ecological species pool. The ecological species pool has a trait structure that is generally different from that of the regional pool, consistent with the operation of environmental filters. In contrast, local species trait structure generally shows little difference from that of the ecological pool. We find notable deviations from expectations based on equiprobable draws from the ecological pool. However, these deviations vary little across scales and broad environmental gradients. For mammals, but not birds, this is consistent with assembly rules. Thus, by conceptualizing ecological pools, we demonstrate that functional structure is jointly determined by processes causing both low and high functional differences between scales and are able to quantify their relative importance. [ABSTRACT FROM AUTHOR]

The species richness of local communities depends on the richness of the regional pool and the filtering processes that preclude some regional species from occurring locally. These filters may include absolute attributes of the local environment and also how representative the local environment is of the surrounding region. The latter is consistent with a species-sorting perspective, in which regional species only occupy the local habitats to which they are adapted. Here we evaluate the relative effects of local environmental conditions, environmental representativeness, and environment-independent processes on the probability of local species occurrence, given their regional presence, of birds, mammals, and amphibians worldwide. In multipredictor models, environmental representativeness is a strong independent predictor of local species occurrence probability, with a relative contribution greater than that of absolute local environmental conditions. Furthermore, we find that local occurrence probability diminishes with increased regional richness independent of the local environment. This is consistent with reduced local occupancy in richer regions, which is a pattern that could stem from a largely neutral community assembly process. Our results support the importance of both environment-independent and species-sorting processes and suggest that regional richness and environmental representativeness should be jointly used for understanding richness gradients across scales. [ABSTRACT FROM AUTHOR]

The relationship between resident species diversity and invasion is generally negative in experimental studies but takes various forms in observational studies of natural communities. We hypothesized that stochastic species colonization, which applies to natural communities but not to experimental communities generally assembled through simultaneous species introduction, may lead to nonnegative diversity-invasion relationships via incurring priority effects. To test this hypothesis, we manipulated both resident species diversity and colonization history in sequentially assembled communities of bacterivorous protist species. We found that, despite a significant effect of assembly history on invader abundance, invader abundance decreased with diversity. This result was largely driven by positive selection effects associated with the dominant influence of an invasion-resistant species, which shared the most similar resource use pattern with the invader, and by the overall weak priority effects observed for the resident communities. Increasing species diversity, however, significantly strengthened priority effects, providing the first experimental support for the idea that larger species pools promote alternative community states. We suggest that elucidating mechanisms regulating the strength of priority effects may help in understanding variation in diversity-invasion relationships among natural communities. [ABSTRACT FROM AUTHOR]

Range limits of species are determined by combined effects of physical, historical, ecological, and evolutionary forces. We consider a subset of these factors by using spatial models of competition, hybridization, and local adaptation to examine the effects of partial dispersal barriers on the locations of borders between similar species. Prompted by results from population genetic models and biogeographic observations, we investigate the conditions under which species' borders are attracted to regions of reduced dispersal. For borders maintained by competition or hybridization, we find that dispersal barriers can attract borders whose positions would otherwise be either neutrally stable or moving across space. Borders affected strongly by local adaptation and gene flow, however, are repelled from dispersal barriers. These models illustrate how particular biotic and abiotic factors may combine to limit species' ranges, and they help to elucidate mechanisms by which range limits of many species may coincide. [ABSTRACT FROM AUTHOR]

Taxa co-occurring in communities often represent a nonrandom sample, in phenotypic or phylogenetic terms, of the regional species pool. While heuristic arguments have identified processes that create community phylogenetic patterns, further progress hinges on a more comprehensive understanding of the interactions between underlying ecological and evolutionary processes. We created a simulation framework to model trait evolution, assemble communities (via competition, habitat filtering, or neutral assembly), and test the phylogenetic pattern of the resulting communities. We found that phylogenetic community structure is greatest when traits are highly conserved and when multiple traits influence species membership in communities. Habitat filtering produces stronger phylogenetic structure when taxa with derived (as opposed to ancestral) traits are favored in the community. Nearest-relative tests have greater power to detect patterns due to competition, while total community relatedness tests perform better with habitat filtering. The size of the local community relative to the regional pool strongly influences statistical power; in general, power increases with larger pool sizes for communities created by filtering but decreases for communities created by competition. Our results deepen our understanding of processes that contribute to phylogenetic community structure and provide guidance for the design and interpretation of empirical research. [ABSTRACT FROM AUTHOR]

Metacommunity theory suggests a potentially important role for dispersal in diversity maintenance at local, as well as regional, scales. In addition, propagule addition experiments have shown that dispersal often limits local diversity. However, actual dispersal rates into local communities and the contribution of immigrants to observed local diversity are poorly known. We present a new approach that partitions the diversity of a target community into dispersal-maintained and dispersal-independent components. Specifically, we quantify distances through space and time to the nearest potential seed source for naturally occurring recruits in target communities by using hierarchical data on species pools (local, site, region, and seed bank). Using this ‘recruit tag’ approach, we found that dispersal contributed 29%–57% of the seedling diversity in perennial grasslands with different successional histories. However, both dispersal and seedling mortality remained remarkably constant, in absolute terms, over succession. The considerable loss of diversity over secondary succession (66%), therefore, could be understood only by considering how these processes interact with the decreasing disturbance rate (i.e., frequency of gaps) in later-successional sites. We conclude that a metacommunity perspective is relevant and necessary to understand the diversity and community assembly of this study system. [ABSTRACT FROM AUTHOR]

Our understanding of the relative influence of different ecological drivers on the number of species in a place remains limited. Assessing the relative influence of local ecological interactions versus regional species pools on local species richness should help bridge this conceptual gap. Plots of local species richness versus regional species pools have been used to address this question, yet after an active quarter-century of research on the relative influence of local interactions versus regional species pools, consensus remains elusive. We propose a conceptual framework that incorporates spatial scale and ecological interaction strength to reconcile current disparities. We then test this framework using a survey of marine rocky intertidal algal and invertebrate communities from the northeast Pacific. We reach two main conclusions. First, these data show that the power of regional species pools to predict local richness disintegrates at small spatial scales coincident with the scale of biological interactions, when studying ecologically interactive groups of species, and in generally more abiotically stressful habitats (e.g., the high intertidal). Second, conclusions of past studies asserting that the regional species pool is the primary driver of local species richness may be artifacts of large spatial scales or ecologically noninteractive groups of species. [ABSTRACT FROM AUTHOR]

Presents information on a study which predicted the abundance of a species from its occupancy. Distribution of individual species; Empirical evaluation; Generality and limits of species abundance.