41 results on '"Jernigan, Robert L"'
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2. Structural compliance: A new metric for protein flexibility
3. Structure and function of LCI1: a plasma membrane CO2 channel in the Chlamydomonas CO2 concentrating mechanism
4. Coupling dynamics and evolutionary information with structure to identify protein regulatory and functional binding sites
5. Profiling of the Exosomal Cargo of Bovine Milk Reveals the Presence of Immune‐ and Growth‐modulatory ncRNAs
6. Altered dynamics upon oligomerization corresponds to key functional sites
7. Multibody coarse‐grained potentials for native structure recognition and quality assessment of protein models
8. The critical role of the loops of triosephosphate isomerase for its oligomerization, dynamics, and functionality
9. Revealing Rotational Modes of Functionalized Gold Nanorods on Live Cell Membranes
10. How noise in force fields can affect the structural refinement of protein models?
11. Multibody coarse‐grained potentials for native structure recognition and quality assessment of protein models
12. The energy profiles of atomic conformational transition intermediates of adenylate kinase
13. Collective dynamics of the ribosomal tunnel revealed by elastic network modeling
14. Iterative cluster-NMA: A tool for generating conformational transitions in proteins
15. Comparisons of experimental and computed protein anisotropic temperature factors
16. Orientational distributions of contact clusters in proteins closely resemble those of an icosahedron
17. Ideal amino acid exchange forms for approximating substitution matrices
18. Predicting the order in which contacts are broken during single molecule protein stretching experiments
19. Four‐body contact potentials derived from two protein datasets to discriminate native structures from decoys
20. Configurational distributions for finite chain molecules
21. A Consensus Data Mining secondary structure prediction by combining GOR V and Fragment Database Mining
22. An enhanced elastic network model to represent the motions of domain-swapped proteins
23. How do side chains orient globally in protein structures?
24. Collective Dynamics of Large Proteins from Mixed Coarse-Grained Elastic Network Model
25. Inferring ideal amino acid interaction forms from statistical protein contact potentials
26. Myosin flexibility: Structural domains and collective vibrations
27. Functional motions can be extracted from on‐lattice construction of protein structures
28. The origin and extent of coarse‐grained regularities in protein internal packing
29. Long‐ and short‐range interactions in native protein structures are consistent/minimally frustrated in sequence space
30. Important fluctuation dynamics of large protein structures are preserved upon coarse‐grained renormalization*
31. Dynamics of large proteins through hierarchical levels of coarse-grained structures
32. Evaluation of short-range interactions as secondary structure energies for protein fold and sequence recognition
33. An empirical energy potential with a reference state for protein fold and sequence recognition
34. Self‐consistent estimation of inter‐residue protein contact energies based on an equilibrium mixture approximation of residues
35. Identification of kinetically hot residues in proteins
36. Understanding the recognition of protein structural classes by amino acid composition
37. DNA conformational kinetics
38. Composite predictions of secondary structures oflac repressor
39. Prediction of ?-sheets in immunoglobulin chains. Comparison of various methods and an expanded 20 � 20 table for evaluation of the effects of nearest-neighbors on conformations of middle amino acids in proteins
40. Equilibrium folding–unfolding pathways of model proteins: Effect of myoglobin–heme contacts
41. Dynamics of large proteins through hierarchical levels of coarse-grained structures.
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