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Abstract: Mid‐ to high‐latitude peatlands are a major terrestrial carbon stock but become carbon sources during droughts, which are increasingly frequent as a result of climate warming. A critical question within this context is the sensitivity to drought of peatland microbial food webs. Microbiota drive key ecological and biogeochemical processes, but their response to drought is likely to impact these processes. Peatland food webs have, however, been little studied, especially the response of microbial predators. We studied the response of microbial predators (testate amoebae, ciliates, rotifers, and nematodes) living in Sphagnum moss carpet to droughts, and their influence on lower trophic levels and on related microbial enzyme activity. We assessed the impact of reduced water availability on microbial predators in two peatlands using experimental (Linje mire, Poland) and natural (Forbonnet mire, France) water level gradients, reflecting a sudden change in moisture regime (Linje), and a typically drier environment (Forbonnet). The sensitivity of different microbial groups to drought was size dependent; large sized microbiota such as testate amoebae declined most under dry conditions (−41% in Forbonnet and −80% in Linje). These shifts caused a decrease in the predator–prey mass ratio (PPMR). We related microbial enzymatic activity to PPMR; we found that a decrease in PPMR can have divergent effects on microbial enzymatic activity. In a community adapted to drier conditions, decreasing PPMR stimulated microbial enzyme activity, while in extreme drought experiment, it reduced microbial activity. These results suggest that microbial enzymatic activity resulting from food web structure is optimal only within a certain range of PPMR, and that different trophic mechanisms are involved in the response of peatlands to droughts. Our findings confirm the importance of large microbial consumers living at the surface of peatlands on the functioning of peatlands, and illustrate their value as early warning indicators of change. [ABSTRACT FROM AUTHOR]

Payne, R. J., Lamentowicz, M. & Mitchell, E. A. D. 2010: The perils of taxonomic inconsistency in quantitative palaeoecology: experiments with testate amoeba data. Boreas, 10.1111/j.1502-3885.2010.00174.x. ISSN 0300-9483. A fundamental requirement of quantitative palaeoecology is consistent taxonomy between a modern training set and palaeoecological data. In this study we assess the possible consequences of violation of this requirement by simulating taxonomic errors in testate amoeba data. Combinations of easily confused taxa were selected, and data manipulated to reflect confusion of these taxa; transfer functions based on unmodified data were then applied to these modified data sets. Initially these experiments were carried out one error at a time using four modern training sets; subsequently, multiple errors were separately simulated both in four modern training sets and in four palaeoecological data sets. Some plausible taxonomic confusions caused major biases in reconstructed values. In the case of two palaeoecological data sets, a single consistent taxonomic error was capable of changing the pattern of environmental reconstruction beyond all recognition, totally removing any real palaeoenvironmental signal. The issue of taxonomic consistency is one that many researchers would rather ignore; our results show that the consequences of this may ultimately be severe. [ABSTRACT FROM AUTHOR]

This high-resolution, multiproxy, palaeoenvironmental study of the Słowińskie Błota raised bog in N Poland, 10 km from the Baltic Sea, covering the last 1200 years reveals different aspects of environmental change in a range of spatial scales from local to regional. Testate amoebae allowed quantitative reconstruction of the local water table using a transfer function based on a training set from N and W Poland. Special attention is paid to the testate amoeba Arcella discoides, which responds to rapid water-table fluctuations more than to average surface wetness. Macrofossils supported by local pollen tracked the local vegetation dynamics caused by local human impact and disturbance, including nutrients. Regional pollen showed human-induced landscape change outside the bog. Tree rings of Pinus sylvestris reflected the history of tree establishment and desiccation of the bog. Strong correlations between DCA axes 1 of regional pollen, of macrofossils and of testate amoebae, and a testate-amoebae-based water-table reconstruction that excludes A. discoides, indicate that changes on all spatial scales are linked, which is explained by a strong hydrologic connection between bog and surroundings. The combination of proxies shows that groundwater levels were modified by both human impact and climate change. [ABSTRACT FROM AUTHOR]

In northern peatlands, reduction of Sphagnum dominance in favour of vascular vegetation is likely to influence biogeochemical processes. Such vegetation changes occur as the water table lowers and temperatures rise. To test which of these factors has a significant influence on peatland vegetation, we conducted a 3‐year manipulative field experiment in Linje mire (northern Poland). We manipulated the peatland water table level (wet, intermediate and dry; on average the depth of the water table was 17.4, 21.2 and 25.3 cm respectively), and we used open‐top chambers (OTCs) to create warmer conditions (on average increase of 1.2°C in OTC plots compared to control plots). Peat drying through water table lowering at this local scale had a larger effect than OTC warming treatment per see on Sphagnum mosses and vascular plants. In particular, ericoid shrubs increased with a lower water table level, while Sphagnum decreased. Microclimatic measurements at the plot scale indicated that both water‐level and temperature, represented by heating degree days (HDDs), can have significant effects on the vegetation. In a large‐scale complementary vegetation gradient survey replicated in three peatlands positioned along a transitional oceanic–continental and temperate–boreal (subarctic) gradient (France–Poland–Western Siberia), an increase in ericoid shrubs was marked by an increase in phenols in peat pore water, resulting from higher phenol concentrations in vascular plant biomass. Our results suggest a shift in functioning from a mineral‐N‐driven to a fungi‐mediated organic‐N nutrient acquisition with shrub encroachment. Both ericoid shrub encroachment and higher mean annual temperature in the three sites triggered greater vascular plant biomass and consequently the dominance of decomposers (especially fungi), which led to a feeding community dominated by nematodes. This contributed to lower enzymatic multifunctionality. Our findings illustrate mechanisms by which plants influence ecosystem responses to climate change, through their effect on microbial trophic interactions. [ABSTRACT FROM AUTHOR]

Summary: Plants produce a wide diversity of metabolites. Yet, our understanding of how shifts in plant metabolites as a response to climate change feedback on ecosystem processes remains scarce. Here, we test to what extent climate warming shifts the seasonality of metabolites produced by Sphagnum mosses, and what are the consequences of these shifts for peatland C uptake.We used a reciprocal transplant experiment along a climate gradient in Europe to simulate climate change. We evaluated the responses of primary and secondary metabolites in five Sphagnum species and related their responses to gross ecosystem productivity (GEP).When transplanted to a warmer climate, Sphagnum species showed consistent responses to warming, with an upregulation of either their primary or secondary metabolite according to seasons. Moreover, these shifts were correlated to changes in GEP, especially in spring and autumn.Our results indicate that the Sphagnum metabolome is very plastic and sensitive to warming. We also show that warming‐induced changes in the seasonality of Sphagnum metabolites have consequences on peatland GEP. Our findings demonstrate the capacity for plant metabolic plasticity to impact ecosystem C processes and reveal a further mechanism through which Sphagnum could shape peatland responses to climate change. [ABSTRACT FROM AUTHOR]

Summary: Soil photoautotrophic prokaryotes and micro‐eukaryotes – known as soil algae – are, together with heterotrophic microorganisms, a constitutive part of the microbiome in surface soils. Similar to plants, they fix atmospheric carbon (C) through photosynthesis for their own growth, yet their contribution to global and regional biogeochemical C cycling still remains quantitatively elusive.Here, we compiled an extensive dataset on soil algae to generate a better understanding of their distribution across biomes and predict their productivity at a global scale by means of machine learning modelling.We found that, on average, (5.5 ± 3.4) × 106 algae inhabit each gram of surface soil. Soil algal abundance especially peaked in acidic, moist and vegetated soils. We estimate that, globally, soil algae take up around 3.6 Pg C per year, which corresponds to c. 6% of the net primary production of terrestrial vegetation.We demonstrate that the C fixed by soil algae is crucial to the global C cycle and should be integrated into land‐based efforts to mitigate C emissions. [ABSTRACT FROM AUTHOR]

Sphagnum mosses are key to northern peatland carbon sequestration. They have a range of morphological and anatomical characteristics that allow them to cope with environmental stress. Sphagnum also produces a plethora of biochemicals that may prevent stress‐induced cell‐damage. However, the linkages between Sphagnum anatomical, morphological and biochemical traits (i.e. metabolites, pigments and antioxidant enzyme activities) are poorly known, neither are their joint responses to environmental change. Here, we quantify and link an array of Sphagnum anatomical, morphological and biochemical traits in five Sphagnum‐dominated peatlands distributed along a latitudinal gradient in Europe, covering a range of regional and local environmental conditions. Sphagnum morphological and anatomical traits were intrinsically linked to Sphagnum metabolites and enzyme activities, and these relationships were driven by shared responses to local and regional environmental factors. More particularly, we found that Sphagnum traits can be grouped into four clusters related to growth, biomass, defense and water stress tolerance. We used regional and local environmental conditions data to further show that biochemicals and their specific linkages with some morphological traits describe dimensions of physiology not captured by anatomical and morphological traits alone. These results suggest that Sphagnum morphology and function is rooted in the metabolome, and that incorporating biochemicals into the functional trait space concept can enhance our mechanistic understanding and predictive power in Sphagnum ecology. [ABSTRACT FROM AUTHOR]

Sphagnum mosses are keystone species in northern peatlands. Notably, they play an important role in peatland carbon (C) cycling by regulating the composition and activity of microbial communities. However, it remains unclear whether information on Sphagnum phylogeny and/or traits‐based composition (i.e. anatomical and morphological traits and metabolites) can be used to predict the structure of microbial communities and their functioning. Here we evaluated whether Sphagnum phylogeny and traits predict additional variation in peatland microbial community composition and functioning beyond what would be predicted from environmental characteristics (i.e. climatic and edaphic conditions).We collected Sphagnum and microbial data from five European peatlands distributed along a latitudinal gradient from northern Sweden to southern France. These data allowed us to assess Sphagnum anatomical and morphological traits and metabolites at different sites along changing environmental conditions. Using structural equation modelling (SEM) and phylogenetic distance analyses, we investigated the role of Sphagnum traits in shaping microbial community composition and functioning along with environmental conditions.We show that microbial community composition and traits varied independently from both Sphagnum phylogeny and the latitudinal gradient. Specifically, the addition of Sphagnum traits to climatic and edaphic variables to the SEM allowed it to explain a larger proportion of the explained variance (R2). This observation was most apparent for the biomass of decomposers (+42%) and phototrophs (+19%), as well as for growth yield microbial traits (+10%). As such, that Sphagnum metabolites were important drivers for microbial community structure and traits, while Sphagnum anatomical and morphological traits were poor predictors.Synthesis. Our results highlight that Sphagnum metabolites are more likely to influence peatland microbial food web structure and functioning than Sphagnum anatomical and morphological traits. We provide further evidence that measurements of the plant metabolome, when combined with classical functional traits, improve our understanding of how the plants interact with their associated microbiomes. [ABSTRACT FROM AUTHOR]

Phototrophic microbes, also known as micro‐algae, display a high abundance in many terrestrial surface soils. They contribute to atmospheric carbon dioxide fluxes through their photosynthesis, and thus regulate climate similar to plants. However, microbial photosynthesis remains overlooked in most terrestrial ecosystems. Here, we hypothesise that phototrophic microbes significantly contribute to peatland C uptake, unless environmental conditions limit their development and their photosynthetic activity.To test our hypothesis, we studied phototrophic microbial communities in five peatlands distributed along a latitudinal gradient in Europe. By means of metabarcoding, microscopy and cytometry analyses, as well as measures of photosynthesis, we investigated the diversity, absolute abundance and photosynthetic rates of the phototrophic microbial communities.We identified 351 photosynthetic prokaryotic and eukaryotic operational taxonomic units (OTUs) across the five peatlands. We found that water availability and plant composition were important determinants of the composition and the structure of phototrophic microbial communities. Despite environmental shifts in community structure and composition, we showed that microbial C fixation rates remained similar along the latitudinal gradient. Our results further revealed that phototrophic microbes accounted for approximately 10% of peatland C uptake.Synthesis. Our findings show that phototrophic microbes are extremely diverse and abundant in peatlands. While species turnover with environmental conditions, microbial photosynthesis similarly contributed to peatland C uptake at all latitudes. We estimate that phototrophic microbes take up around 75 MT CO2 per year in northern peatlands. This amount roughly equals the magnitude of projected peatland C loss due to climate warming and highlights the importance of phototrophic microbes for the peatland C cycle. [ABSTRACT FROM AUTHOR]

Recent studies show that soil eukaryotic diversity is immense and dominated by micro‐organisms. However, it is unclear to what extent the processes that shape the distribution of diversity in plants and animals also apply to micro‐organisms. Major diversification events in multicellular organisms have often been attributed to long‐term climatic and geological processes, but the impact of such processes on protist diversity has received much less attention as their distribution has often been believed to be largely cosmopolitan. Here, we quantified phylogeographical patterns in Hyalosphenia papilio, a large testate amoeba restricted to Holarctic Sphagnum‐dominated peatlands, to test if the current distribution of its genetic diversity can be explained by historical factors or by the current distribution of suitable habitats. Phylogenetic diversity was higher in Western North America, corresponding to the inferred geographical origin of the H. papilio complex, and was lower in Eurasia despite extensive suitable habitats. These results suggest that patterns of phylogenetic diversity and distribution can be explained by the history of Holarctic Sphagnum peatland range expansions and contractions in response to Quaternary glaciations that promoted cladogenetic range evolution, rather than the contemporary distribution of suitable habitats. Species distributions were positively correlated with climatic niche breadth, suggesting that climatic tolerance is key to dispersal ability in H. papilio. This implies that, at least for large and specialized terrestrial micro‐organisms, propagule dispersal is slow enough that historical processes may contribute to their diversification and phylogeographical patterns and may partly explain their very high overall diversity. [ABSTRACT FROM AUTHOR]

Abstract: Ecosystems are increasingly prone to climate extremes, such as drought, with long‐lasting effects on both plant and soil communities and, subsequently, on carbon (C) cycling. However, recent studies underlined the strong variability in ecosystem's response to droughts, raising the issue of nonlinear responses in plant and soil communities. The conundrum is what causes ecosystems to shift in response to drought. Here, we investigated the response of plant and soil fungi to drought of different intensities using a water table gradient in peatlands—a major C sink ecosystem. Using moving window structural equation models, we show that substantial changes in ecosystem respiration, plant and soil fungal communities occurred when the water level fell below a tipping point of −24 cm. As a corollary, ecosystem respiration was the greatest when graminoids and saprotrophic fungi became prevalent as a response to the extreme drought. Graminoids indirectly influenced fungal functional composition and soil enzyme activities through their direct effect on dissolved organic matter quality, while saprotrophic fungi directly influenced soil enzyme activities. In turn, increasing enzyme activities promoted ecosystem respiration. We show that functional transitions in ecosystem respiration critically depend on the degree of response of graminoids and saprotrophic fungi to drought. Our results represent a major advance in understanding the nonlinear nature of ecosystem properties to drought and pave the way towards a truly mechanistic understanding of the effects of drought on ecosystem processes. [ABSTRACT FROM AUTHOR]

Population dynamics is a field rich in theory and poor in long-term observational data. Finding sources of long-term data is critical as ecosystems around the globe continue to change in ways that current theories and models have failed to predict. Here we show how long-term ecological data can improve our understanding about palaeo-population change in response to external environmental factors, antecedent conditions and community diversity., We examined a radiometrically dated sediment core from the Didachara Mire in the mountains of south-western Georgia (Caucasus) and analysed multiple biological proxies (pollen, fern spores, non-pollen palynomorphs, charcoal, diatoms, chrysophyte cysts, midges, mites and testate amoebae). Numerical techniques, including multivariate ordination, rarefaction, independent splitting and trait analysis, were used to assess the major drivers of changes in community diversity and population stability. Integrated multi-proxy analyses are very rare in the Caucasus, making this a unique record of long-term ecological change in a global biodiversity hotspot., Synthesis. Population changes in the terrestrial community coincided primarily with external environmental changes, while populations within the peatland community were affected by both internal and external drivers at different times. In general, our observations accord with theoretical predictions that population increases lead to greater stability and declines lead to instability. Random variation and interspecific competition explain population dynamics that diverged from predictions. Population change and diversity trends were positively correlated in all taxonomic groups, suggesting that population-level instability is greater in more diverse communities, even though diverse communities are themselves more stable. There is a continuing need to confront population theory with long-term data to test the predictive success of theoretical frameworks, thereby improving their ability to predict future change. [ABSTRACT FROM AUTHOR]

Untangling the relationships between morphology and phylogeny is key to building a reliable taxonomy, but is especially challenging for protists, where the existence of cryptic or pseudocryptic species makes finding relevant discriminant traits difficult. Here we use Hyalosphenia papilio (a testate amoeba) as a model species to investigate the contribution of phylogeny and phenotypic plasticity in its morphology. We study the response of H. papilio morphology (shape and pores number) to environmental variables in (i) a manipulative experiment with controlled conditions (water level), (ii) an observational study of a within-site natural ecological gradient (water level), and (iii) an observational study across 37 European peatlands (climate). We showed that H. papilio morphology is correlated to environmental conditions (climate and water depth) as well as geography, while no relationship between morphology and phylogeny was brought to light. The relative contribution of genetic inheritance and phenotypic plasticity in shaping morphology varies depending on the taxonomic group and the trait under consideration. Thus, our data call for a reassessment of taxonomy based on morphology alone. This clearly calls for a substantial increase in taxonomic research on these globally still under-studied organisms leading to a reassessment of estimates of global microbial eukaryotic diversity. [ABSTRACT FROM AUTHOR]

Plant community composition is recognized more and more for playing an important role in ecosystem processes, such as C cycling. In particular, plant functional type ( PFT) composition seems to have a key regulatory role, yet the underlying mechanisms in the interaction between PFTs and ecosystem processes are still to be identified., Here, we assess the link between PFTs and dominant microbial consumers along a calcareous poor to extremely rich fen gradient in western Poland. We particularly focussed on dominant microbial consumers (testate amoebae), which can exert large effects on the functioning of peatlands. Using moving-window analyses and path-relation networks subjected to structural equation modelling ( SEM), we investigated linkages among abiotic factors, PFTs and testate amoebae., We show that along the poor to extremely rich fen gradient, the dependence of testate amoebae to PFTs is higher than their dependence to abiotic factors. We also found that the link between testate amoebae and PFTs differs between size assemblages of testate amoebae. While large testate amoeba species (i.e. high trophic level) were highly linked to Sphagnum mosses cover, small species (i.e. low trophic level) were linked to brown mosses. Distinction between shallow-rooted and deep-rooted vascular plants also showed that shallow-rooted plants play a role on testate amoeba community structure at the 'poor' side of the gradient., Our results further show a dominant role for calcium content and the structure of the bryophyte community on testate amoeba size assemblages at the poor to extremely rich fen scale, both for diversity and abundance of testate amoebae., Synthesis. Variations in plant functional type composition drive niche-size-structure of testate amoebae along the (calcareous) poor to extremely rich fen gradient. Furthermore, strong relationships between moss types and testate amoeba size-structure suggest that mosses specifically influence testate amoeba development through autogenic effects. Therefore, moss cover composition is key to microbial consumers and may be the driving factor determining microbial network structure and associated ecosystem processes, such as carbon cycling. [ABSTRACT FROM AUTHOR]

We investigated the relationships between testate amoebae (Arcellinida, Euglyphida), vegetation and water chemistry along environmental gradients in minerotrophic peatlands (fens) in western Poland. We hypothesized that: a) hydrochemistry significantly influences structure of testate amoeba communities, and b) testate amoeba communities are more closely correlated with the hydrochemical variables (environment) than with the vegetation data. Testate amoeba communities and vegetation from 71 sample plots were investigated together with the hydro-chemistry and hydrology based on 16 environmental variables and vegetation composition. Testate amoeba communities revealed a distinctive poor-rich gradient in analysed fens. Mineral-rich habitats, which were dominated by brown mosses, were preferred by a higher number of taxa than acidic habitats, which were dominated by Sphagnum. We recorded a total of 107 testate amoebae taxa. The average species richness of testate amoebae for brown mosses was higher (20) than for Sphagnum (13). We found that testate amoebae communities were similarly correlated with vascular plants, mosses and environmental parameters. Results of direct ordination demonstrate that hydrology, pH, Mg2+ and sodium remain the most important environmental control for the entire data set. CCA showed that in case of brown mosses hydrology, sodium and oxygen affect testate amoeba communities significantly whereas in Sphagnum only sodium emerge as most significant determining testate amoeba assemblages. (© 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [ABSTRACT FROM AUTHOR]