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2. Microbially mediated climate feedbacks from wetland ecosystems.

3. Ecophysiological and genomic analyses of a representative isolate of highly abundant Bacillus cereus strains in contaminated subsurface sediments.

4. Microbial maintenance energy quantified and modeled with microcalorimetry.

6. The influence of alfalfa‐switchgrass intercropping on microbial community structure and function.

8. Reply.

9. Nitrous oxide emissions associated with ammonia‐oxidizing bacteria abundance in fields of switchgrass with and without intercropped alfalfa.

10. Iron‐ and aluminium‐induced depletion of molybdenum in acidic environments impedes the nitrogen cycle.

11. Ammonia‐oxidizing bacteria are the primary N2O producers in an ammonia‐oxidizing archaea dominated alkaline agricultural soil.

12. Constraint‐based modelling captures the metabolic versatility of <italic>Desulfovibrio vulgaris</italic>.

13. Relative impacts of light, temperature, and reactive oxygen on thaumarchaeal ammonia oxidation in the North Pacific Ocean.

14. Robustness of a model microbial community emerges from population structure among single cells of a clonal population.

15. Influence of oxygen availability on the activities of ammonia-oxidizing archaea.

16. Mechanism for microbial population collapse in a fluctuating resource environment.

17. Agricultural land usage transforms nitrifier population ecology.

18. The production of nitric oxide by marine ammonia-oxidizing archaea and inhibition of archaeal ammonia oxidation by a nitric oxide scavenger.

19. Influence of edaphic and management factors on the diversity and abundance of ammonia-oxidizing thaumarchaeota and bacteria in soils of bioenergy crop cultivars.

20. Evaluation of revised polymerase chain reaction primers for more inclusive quantification of ammonia-oxidizing archaea and bacteria.

21. Determination of four forms of vitamin B12 and other B vitamins in seawater by liquid chromatography/tandem mass spectrometry.

22. The energy-conserving electron transfer system used by D esulfovibrio alaskensis strain G20 during pyruvate fermentation involves reduction of endogenously formed fumarate and cytoplasmic and membrane-bound complexes, Hdr-Flox and Rnf.

23. Copper requirements of the ammonia-oxidizing archaeon Nitrosopumilus maritimus SCM1 and implications for nitrification in the marine environment.

24. Mapping of active replication origins in vivo in thaum- and euryarchaeal replicons.

25. Mimicking the oxygen minimum zones: stimulating interaction of aerobic archaeal and anaerobic bacterial ammonia oxidizers in a laboratory-scale model system.

26. Cdv-based cell division and cell cycle organization in the thaumarchaeon Nitrosopumilus maritimus.

27. Hydrogen peroxide-induced oxidative stress responses in Desulfovibrio vulgaris Hildenborough.

28. Diversity and host specificity of the Verminephrobacter–earthworm symbiosis.

29. Transmission of a bacterial consortium in Eisenia fetida egg capsules.

30. Methylophilaceae link methanol oxidation to denitrification in freshwater lake sediment as suggested by stable isotope probing and pure culture analysis.

31. Dietary Protein and Cellulose Effects on Chemical and Microbial Characteristics of Swine Feces and Stored Manure.

32. Contribution of mobile genetic elements to Desulfovibrio vulgaris genome plasticity.

35. Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol.

36. Functionally distinct communities of ammonia-oxidizing bacteria along an estuarine salinity gradient.

37. Saliva-Based Diagnostics Using 16S rRNA Microarrays and Microfluidics.

38. Recovery of temperate Desulfovibrio vulgaris bacteriophage using a novel host strain.

39. Impact of prehybridization PCR amplification on microarray detection of nitrifying bacteria in wastewater treatment plant samples.

40. Loss of diversity of ammonia-oxidizing bacteria correlates with increasing salinity in an estuary system.

41. Hydrothermal vent gastropods from the same family (Provannidae) harbourℇ- andγ-proteobacterial endosymbionts.

42. Pathways of organic carbon oxidation in a deep lacustrine sediment, Lake Michigan.

43. Acidovorax -like symbionts in the nephridia of earthworms.

44. Related assemblages of sulphate-reducing bacteria associated with ultradeep gold mines of South Africa and deep basalt aquifers of Washington State.

45. Fluorescence in situ hybridization of 16S rRNA gene clones (Clone-FISH) for probe validation and screening of clone libraries.

46. Optimization of an oligonucleotide microchip for microbial identification studies: a non-equilibrium dissociation approach.

48. Microbiological, molecular biological and stable isotopic evidence for nitrogen fixation in the....

49. Comparison of microbial populations in model and natural rumens using 16S ribosomal RNA-targeted probes.

50. Sulphate reduction and vertical distribution of sulphate-reducing bacteria quantified by rRNA slot-blot hybridization in a coastal marine sediment.

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