222 results on '"Mirny, Leonid A."'
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2. Mitotic chromosomes are self-entangled and disentangle through a topoisomerase-II-dependent two-stage exit from mitosis
3. Diverse silent chromatin states modulate genome compartmentalization and loop extrusion barriers
4. Chromosome and protein folding: In search for unified principles
5. MCM complexes are barriers that restrict cohesin-mediated loop extrusion
6. The 4D Nucleome Data Portal as a resource for searching and visualizing curated nucleomics data
7. Spatial organization of transcribed eukaryotic genes
8. Systematic evaluation of chromosome conformation capture assays
9. DNA-loop-extruding SMC complexes can traverse one another in vivo
10. RNA polymerases as moving barriers to condensin loop extrusion
11. Chromatin organization by an interplay of loop extrusion and compartmental segregation
12. A pathway for mitotic chromosome formation
13. Heterochromatin drives compartmentalization of inverted and conventional nuclei
14. Protein Complexes and Functional Modules in Molecular Networks
15. Amino Acids Determining Enzyme-Substrate Specificity in Prokaryotic and Eukaryotic Protein Kinases
16. Highly structured homolog pairing reflects functional organization of the Drosophila genome
17. The genome-wide multi-layered architecture of chromosome pairing in early Drosophila embryos
18. How Evolution Makes Proteins Fold Quickly
19. Two independent modes of chromatin organization revealed by cohesin removal
20. The 4D nucleome project
21. Tug-of-war between driver and passenger mutations in cancer and other adaptive processes
22. Corrigendum: The 4D nucleome project
23. Diminished PRRX1 Expression Is Associated With Increased Risk of Atrial Fibrillation and Shortening of the Cardiac Action Potential
24. Organization of the Mitotic Chromosome
25. High-Resolution Mapping of the Spatial Organization of a Bacterial Chromosome
26. HiGlass: web-based visual exploration and analysis of genome interaction maps
27. Super-resolution imaging reveals distinct chromatin folding for different epigenetic states
28. Cells use loop extrusion to weave and tie the genome
29. Impact of deleterious passenger mutations on cancer progression
30. Sequence-dependent sliding kinetics of p53
31. Isoform-Specific Expression and Feedback Regulation of E Protein TCF4 Control Dendritic Cell Lineage Specification
32. A single-molecule characterization of p53 search on DNA
33. Nucleosome-mediated cooperativity between transcription factors
34. Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
35. How Gene Order Is Influenced by the Biophysics of Transcription Regulation
36. A Metabolic Network in the Evolutionary Context: Multiscale Structure and Modularity
37. Live-cell micromanipulation of a genomic locus reveals interphase chromatin mechanics.
38. Cohesin-dependent globules and heterochromatin shape 3D genome architecture in S. pombe
39. The fractal globule as a model of chromatin architecture in the cell
40. Dynamics of CTCF- and cohesin-mediated chromatin looping revealed by live-cell imaging.
41. BIOLOGICAL TECHNIQUES: Chromosomes captured one by one
42. Single-nucleus Hi-C reveals unique chromatin reorganization at oocyte-to-zygote transition
43. Zfx Controls the Self-Renewal of Embryonic and Hematopoietic Stem Cells
44. Using genome-wide measurements for computational prediction of SH2–peptide interactions
45. Spatial effects on the speed and reliability of protein–DNA search
46. Predicting transcription factor specificity with all-atom models
47. Protein knot server: detection of knots in protein structures
48. CoC: a database of universally conserved residues in protein folds
49. A Ligand-Based Approach to Understanding Selectivity of Nuclear Hormone Receptors PXR, CAR, FXR, LXRα, and LXRβ
50. Structural analysis of conserved base pairs in protein–DNA complexes
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