33 results on '"B. A. Stark"'
Search Results
2. meso-Tetrahexyl-7,8-dihydroxychlorin and Its Conversion to ß-Modified Derivatives
- Author
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Daniel Aicher, Dinusha Damunupola, Christian B. W. Stark, Arno Wiehe, and Christian Brückner
- Subjects
meso-alkylporphyrins ,meso-hexylporphyrin ,meso-hexylchlorin ,meso-hexylporphyrionoids ,porphyrin β-position modification ,Organic chemistry ,QD241-441 - Abstract
meso-Tetrahexylporphyrin was converted to its corresponding 7,8-dihydroxychlorin using an osmium tetroxide-mediated dihydroxylation strategy. Its diol moiety was shown to be able to undergo a number of subsequent oxidation reactions to form a chlorin dione and porpholactone, the first meso-alkylporphyrin-based porphyrinoid containing a non-pyrrolic building block. Further, the diol chlorin was shown to be susceptible to dehydration, forming the porphyrin enol that is in equilibrium with its keto-chlorin form. The meso-hexylchlorin dione could be reduced and it underwent mono- and bis-methylation reactions using methyl-Grignard reagents, and trifluoromethylation using the Ruppert-Prakash reagent. The optical and spectroscopic properties of the products are discussed and contrasted to their corresponding meso-aryl derivatives (where known). This contribution establishes meso-tetrahexyl-7,8-dihydroxychlorins as a new and versatile class of chlorins that is susceptible to a broad range of conversions to generate functionalized chlorins and a pyrrole-modified chlorin analogue.
- Published
- 2024
- Full Text
- View/download PDF
3. The direct oxidative diene cyclization and related reactions in natural product synthesis
- Author
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Juliane Adrian, Leona J. Gross, and Christian B. W. Stark
- Subjects
asymmetric synthesis ,natural products ,oxidation catalysis ,tetrahydrofurans ,total synthesis ,Science ,Organic chemistry ,QD241-441 - Abstract
The direct oxidative cyclization of 1,5-dienes is a valuable synthetic method for the (dia)stereoselective preparation of substituted tetrahydrofurans. Closely related reactions start from 5,6-dihydroxy or 5-hydroxyalkenes to generate similar products in a mechanistically analogous manner. After a brief overview on the history of this group of transformations and a survey on mechanistic and stereochemical aspects, this review article provides a summary on applications in natural product synthesis. Moreover, current limitations and future directions in this area of chemistry are discussed.
- Published
- 2016
- Full Text
- View/download PDF
4. Heronapyrrole D: A case of co-inspiration of natural product biosynthesis, total synthesis and biodiscovery
- Author
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Jens Schmidt, Zeinab Khalil, Robert J. Capon, and Christian B. W. Stark
- Subjects
biomimetic synthesis ,biosynthesis ,heronapyrroles ,microbial biodiscovery ,natural products ,nitropyrroloterpenes ,Science ,Organic chemistry ,QD241-441 - Abstract
The heronapyrroles A–C have first been isolated from a marine-derived Streptomyces sp. (CMB-0423) in 2010. Structurally, these natural products feature an unusual nitropyrrole system to which a partially oxidized farnesyl chain is attached. The varying degree of oxidation of the sesquiterpenyl subunit in heronapyrroles A–C provoked the hypothesis that there might exist other hitherto unidentified metabolites. On biosynthetic grounds a mono-tetrahydrofuran-diol named heronapyrrole D appeared a possible candidate. We here describe a short asymmetric synthesis of heronapyrrole D, its detection in cultivations of CMB-0423 and finally the evaluation of its antibacterial activity. We thus demonstrate that biosynthetic considerations and the joint effort of synthetic and natural product chemists can result in the identification of new members of a rare class of natural products.
- Published
- 2014
- Full Text
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5. Light‐Driven Waste‐To‐Value Upcycling: Bio‐Based Polyols and Polyurethanes from the Photo‐Oxygenation of Cardanols
- Author
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Christian B. W. Stark, Patrick Bayer, Robin Stuhr, and Axel Jacobi von Wangelin
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Green chemistry ,chemistry.chemical_classification ,polyols ,Cardanol ,photochemistry ,Materials science ,Full Paper ,oxidation ,Alkene ,General Chemical Engineering ,Bio based ,Biomass ,Full Papers ,biomass valorization ,Upcycling ,chemistry.chemical_compound ,General Energy ,chemistry ,polyurethane ,Light driven ,Environmental Chemistry ,Organic chemistry ,General Materials Science ,Polyurethane - Abstract
The upcycling of waste biomass into valuable materials by resource‐efficient chemical transformations is a prime objective for sustainable chemistry. This approach is demonstrated in a straightforward light‐driven synthesis of polyols and polyurethane foams from the multi‐ton waste products of cashew nut processing. The photo‐oxygenation of cardanol from nutshell oil results in the formation of synthetically versatile hydroperoxides. The choice of the workup method (i. e., reduction, hydrogenation, epoxidation) enables access to a diverse range of alcohols with tunable alkene and OH functions. Condensation with isocyanates to give rigid polyurethane foams provides a resource‐efficient waste‐to‐value chain that benefits from the availability of cardanol and installation of OH groups from aerial O2., A tough nut to crack: The upcycling of waste biomass into valuable materials is a prime objective for sustainable chemistry. The multi‐ton waste cashew nut shell liquid is used in the light‐driven synthesis of polyols with tunable OH contents and in the subsequent preparation of rigid polyurethane foams.
- Published
- 2021
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6. Synthesis of Cytospolide Analogues and Late-State Diversification Thereof
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Gunnar Ehrlich and Christian B. W. Stark
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chemistry.chemical_classification ,Biological Products ,Natural product ,Bicyclic molecule ,010405 organic chemistry ,Chemistry ,Stereochemistry ,Organic Chemistry ,Molecular Conformation ,Alkyne ,Sonogashira coupling ,010402 general chemistry ,Ring (chemistry) ,01 natural sciences ,0104 chemical sciences ,Polyketide ,chemistry.chemical_compound ,Acetylation ,Polyketides ,Side chain ,Macrolides ,Furans - Abstract
The cytospolides are a novel group of fungal secondary metabolites first described in 2011. Although all 17 natural derivatives share the same C-14 polyketide backbone, they exhibit a fairly broad structural diversity regarding their oxygenation and acetylation pattern as well as macrolide structure, e.g., monocyclic nonanolide core or bicyclic ring systems with a bridging THF ring. In the present work, the prospects for an extension of the structural diversity of cytospolides have been investigated. On the basis of a previously established synthesis of cytospolide D, a modified route to a truncated analogue carrying an alkyne instead of the natural n-pentyl side chain has been developed. In a bioinspired approach the so-derived cytospolide D alkyne analogue has been further converted to bicyclic and THF ring containing derivatives with a different backbone architecture. Finally, Sonogashira couplings or Huisgen-Sharpless click reactions have been used for late-stage diversifications. Thus, a set of 15 novel and structurally diverse natural product derivatives has been synthesized in a highly efficient manner.
- Published
- 2019
7. Heronapyrrole D: A case of co-inspiration of natural product biosynthesis, total synthesis and biodiscovery
- Author
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Zeinab G. Khalil, Robert J. Capon, Christian B. W. Stark, and Jens Schmidt
- Subjects
Letter ,Stereochemistry ,natural products ,Protein subunit ,Streptomyces ,microbial biodiscovery ,lcsh:QD241-441 ,chemistry.chemical_compound ,Biosynthesis ,lcsh:Organic chemistry ,Biomimetic synthesis ,Organic chemistry ,biomimetic synthesis ,lcsh:Science ,nitropyrroloterpenes ,Natural product ,biology ,Organic Chemistry ,Enantioselective synthesis ,Total synthesis ,biology.organism_classification ,Chemistry ,heronapyrroles ,chemistry ,lcsh:Q ,biosynthesis ,Antibacterial activity - Abstract
The heronapyrroles A–C have first been isolated from a marine-derived Streptomyces sp. (CMB-0423) in 2010. Structurally, these natural products feature an unusual nitropyrrole system to which a partially oxidized farnesyl chain is attached. The varying degree of oxidation of the sesquiterpenyl subunit in heronapyrroles A–C provoked the hypothesis that there might exist other hitherto unidentified metabolites. On biosynthetic grounds a mono-tetrahydrofuran-diol named heronapyrrole D appeared a possible candidate. We here describe a short asymmetric synthesis of heronapyrrole D, its detection in cultivations of CMB-0423 and finally the evaluation of its antibacterial activity. We thus demonstrate that biosynthetic considerations and the joint effort of synthetic and natural product chemists can result in the identification of new members of a rare class of natural products.
- Published
- 2014
8. Synthetic Endeavors toward 2-Nitro-4-Alkylpyrroles in the Context of the Total Synthesis of Heronapyrrole C and Preparation of a Carboxylate Natural Product Analogue
- Author
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Christian B. W. Stark and Jens Schmidt
- Subjects
Biological Products ,Molecular Structure ,Organic Chemistry ,Carboxylic Acids ,Regioselectivity ,Total synthesis ,Haloform reaction ,Nitro Compounds ,Combinatorial chemistry ,chemistry.chemical_compound ,chemistry ,Biomimetics ,Cyclization ,Dihydroxylation ,Nitration ,Organic chemistry ,Pyrroles ,Carboxylate ,Shi epoxidation ,Pyrrole - Abstract
The synthesis of 2-nitro-4-oligoprenyl-substituted pyrrole derivatives relevant to the heronapyrroles and related natural products was investigated. Among numerous approaches, nitration of a 3-farnesyl-substituted unprotected pyrrole using AcONO2 gave the best results, albeit still with unsatisfactory yield and regioselectivity. Therefore, the synthesis of (-)-heronapyrrole C acid, an analogue of the naturally occurring antibiotic heronapyrrole C carrying a bioisosteric carboxylate in place of the nitro group, was examined. In lieu of the unsatisfactory nitration, a regioselective acylation with Cl3CCOCl was carried out (>8:1 regioselectivity, in contrast to the 1:1.3 ratio for the nitration). The trichloromethyl ketone was converted to the desired acid in a haloform reaction at the final stage of the synthesis. Further key steps of the analogue synthesis involved a position- and stereoselective Corey-Noe-Lin dihydroxylation and an organocatalytic double Shi epoxidation. A biomimetic polyepoxide cyclization cascade established the bis-THF backbone. Thus, (-)-heronapyrrole C acid was synthesized in eight steps (14.5% overall yield) from commercially available starting materials.
- Published
- 2014
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9. Total synthesis of (±)-paracaseolide A and initial attempts at a Lewis acid mediated dimerization of its putative biosynthetic precursor
- Author
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David S. Giera and Christian B. W. Stark
- Subjects
Suzuki reaction ,Chemistry ,Stereochemistry ,General Chemical Engineering ,Yield (chemistry) ,Total synthesis ,General Chemistry ,Lewis acids and bases ,Butenolide ,Catalysis - Abstract
A short (5 steps) and highly efficient (25% overall yield) synthesis of paracaseolide A is described. Crucial steps are an α-iodination of a butenolide, a Suzuki coupling and a thermal Diels–Alder reaction. In attempts at Lewis acid catalyzed [4 + 2]-cycloadditions a set of novel dimerization products of the proposed biosynthetic paracaseolide A precursor were produced.
- Published
- 2013
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10. Modular and Stereodivergent Approach to Unbranched 1,5,9,n-Polyenes: Total Synthesis of Chatenaytrienin-4
- Author
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Christian B. W. Stark and Juliane Adrian
- Subjects
chemistry.chemical_classification ,Double bond ,010405 organic chemistry ,Stereochemistry ,Organic Chemistry ,Alkyne ,Total synthesis ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,Hydroboration ,chemistry.chemical_compound ,chemistry ,Acetogenin ,Stereoselectivity ,Selectivity ,Protecting group - Abstract
An iterative strategy for the stereodivergent synthesis of unbranched 1,5,9,n-polyenes (and -polyynes) was investigated. Starting from a terminal alkyne the iteration cycle consists of a C3 extension (allylation), a chemoselective hydroboration, an alkyne reduction, and an oxidation of the associated alcohol with subsequent C1 homologation. Double bond geometry is controlled using stereoselective alkyne reductions, employing either the Lindlar hydrogenation protocol or an aluminum hydride reduction. In a model sequence it was demonstrated that the strategy is applicable to the synthesis of 1,5,9,n-polyenes with any possible double bond configuration accessible in equally high efficiency and selectivity. It is worth noting that our approach does not require any protecting group chemistry. Furthermore, using the same strategy, the first total synthesis of chatenaytrienin-4, the proposed unsaturated biosynthetic precursor of the bis-THF acetogenin membranacin, was examined. Thus, the all-cis 1,5,9-triene natural product was prepared in 15 steps from commercially available starting materials in 6% overall yield.
- Published
- 2016
11. The direct oxidative diene cyclization and related reactions in natural product synthesis
- Author
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Leona J. Gross, Christian B. W. Stark, and Juliane Adrian
- Subjects
oxidation catalysis ,Diene ,natural products ,asymmetric synthesis ,Oxidative phosphorylation ,Review ,010402 general chemistry ,01 natural sciences ,lcsh:QD241-441 ,chemistry.chemical_compound ,lcsh:Organic chemistry ,Organic chemistry ,lcsh:Science ,total synthesis ,Oxidative cyclization ,Natural product ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Enantioselective synthesis ,Total synthesis ,0104 chemical sciences ,Stereoselectivity ,lcsh:Q ,tetrahydrofurans - Abstract
The direct oxidative cyclization of 1,5-dienes is a valuable synthetic method for the (dia)stereoselective preparation of substituted tetrahydrofurans. Closely related reactions start from 5,6-dihydroxy or 5-hydroxyalkenes to generate similar products in a mechanistically analogous manner. After a brief overview on the history of this group of transformations and a survey on mechanistic and stereochemical aspects, this review article provides a summary on applications in natural product synthesis. Moreover, current limitations and future directions in this area of chemistry are discussed.
- Published
- 2016
12. Vanadium diboride catalyzed oxidation of cyclooctene by molecular oxygen: Kinetic study
- Author
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Bärbel Schulze, Christian B. W. Stark, Oksana Makota, Wladimir Suprun, Yuriy Trach, and Lidia V. Bulgakova
- Subjects
chemistry.chemical_classification ,Alkene ,Process Chemistry and Technology ,Radical ,Kinetics ,Inorganic chemistry ,Vanadium ,chemistry.chemical_element ,Photochemistry ,Decomposition ,Catalysis ,Reaction rate ,chemistry.chemical_compound ,chemistry ,Cyclooctene ,Physical and Theoretical Chemistry - Abstract
The kinetics of the liquid-phase oxidation of cyclooctene by molecular oxygen catalyzed by VB2 on initial stages of process was studied. The vanadium diboride was found to activate the oxidation process in the presence of hydroperoxide in the reaction system. It was shown by FTIR investigation that cyclooctene and hydroperoxide are complexed with the same catalytic center. The reaction rate depended on cyclooctene concentration with less than first order. In the investigation system the radicals are formed as a result of proceeding of two processes—noncatalytic and catalyzed by vanadium diboride bimolecular decomposition of tert-butyl hydroperoxide. Based on the obtained data the kinetic model of the investigated process was proposed. The equation for the reaction rate was derived from this model. This equation is allowed to describe all observed kinetic dependences.
- Published
- 2009
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13. The winter stonefly genus Paracapnia (Plecoptera: Capniidae)
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B. P. Stark and R. W. Baumann
- Subjects
Holarctic ,Genus ,Nearctic ecozone ,Paracapnia ,Zoology ,Capniidae ,Biology ,biology.organism_classification - Abstract
This article reviews the capniid genus Paracapnia Hanson and describes a new species, P. boris, from males and females collected in northern California, provisionally assigned to the genus. Paracapnia oswegaptera (Jewett) is placed in synonymy with P. ensicala (Jewett), and the first description is provided for the male of P. disala (Jewett). Keys are presented for recognized Palearctic and Nearctic members of the genus. Distribution data are given for specimens examined and for those in the published literature.
- Published
- 2004
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14. Analysis of the biosynthetic gene cluster for the polyether antibiotic monensin in Streptomyces cinnamonensis and evidence for the role of monB and monC genes in oxidative cyclization
- Author
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Zoryana Oliynyk, Zoë A. Hughes-Thomas, Yuliya Demydchuk, Christopher J. Wilkinson, Christian B. W. Stark, Peter F. Leadlay, Michelle A. Jones, Markiyan Oliynyk, Apoorva Bhatt, and James Staunton
- Subjects
biology ,Monensin ,Microbiology ,Cyclase ,Polyketide ,chemistry.chemical_compound ,chemistry ,Biochemistry ,Polyketide synthase ,Gene cluster ,biology.protein ,Heterologous expression ,Molecular Biology ,Gene ,Regulator gene - Abstract
The analysis of a candidate biosynthetic gene cluster (97 kbp) for the polyether ionophore monensin from Streptomyces cinnamonensis has revealed a modular polyketide synthase composed of eight separate multienzyme subunits housing a total of 12 extension modules, and flanked by numerous other genes for which a plausible function in monensin biosynthesis can be ascribed. Deletion of essentially all these clustered genes specifically abolished monensin production, while overexpression in S. cinnamonensis of the putative pathway-specific regulatory gene monR led to a fivefold increase in monensin production. Experimental support is presented for a recently-proposed mechanism, for oxidative cyclization of a linear polyketide intermediate, involving four enzymes, the products of monBI, monBII, monCI and monCII. In frame deletion of either of the individual genes monCII (encoding a putative cyclase) or monBII (encoding a putative novel isomerase) specifically abolished monensin production. Also, heterologous expression of monCI, encoding a flavin-linked epoxidase, in S. coelicolor was shown to significantly increase the ability of S. coelicolor to epoxidize linalool, a model substrate for the presumed linear polyketide intermediate in monensin biosynthesis.
- Published
- 2003
- Full Text
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15. Charge-induced distortion and stabilization of surface transfer doped porphyrin films
- Author
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Christiane Ziegler, Martina Wanke, Felix Schmitt, Lothar Ley, Yaou Smets, Christian B W Stark, Stefan Lach, Christopher A. Wright, and Christopher Ian Pakes
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Materials science ,Fullerene ,Naturwissenschaftliche Fakultät -ohne weitere Spezifikation ,Analytical chemistry ,General Physics and Astronomy ,Molecular electronics ,Electron spectroscopy ,law.invention ,Organic semiconductor ,X-ray photoelectron spectroscopy ,law ,Chemical physics ,Monolayer ,ddc:530 ,Physical and Theoretical Chemistry ,Scanning tunneling microscope ,Ultraviolet photoelectron spectroscopy - Abstract
The interaction between zinc-tetraphenylporphyrin (ZnTPP) and fullerenes (C60 and C60F48) are studied using ultraviolet photoelectron spectroscopy (UPS) and scanning tunneling microscopy (STM). Low temperature STM reveals highly ordered ZnTPP monolayers on Au(111). In contrast to C60, a submonolayer coverage of C60F48 results in long-range disorder of the underlying single ZnTPP layer and distortion of individual ZnTPP molecules. This is induced by substantial charge transfer at the organic-organic interface, revealed by the interface energetics from UPS. However, a second layer of ZnTPP prevents C60F48 guests from breaking the self-assembled porphyrin template. This finding is important for understanding the growth behaviour of “bottom-up” functional nanostructures involving strong donor-acceptor heterojunctions in molecular electronics.
- Published
- 2013
16. Sodium monensin dihydrate
- Author
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Norberto Peporine Lopes, James Staunton, Jacek Klinowski, Christian B. W. Stark, Stan Fowler, Paul J. Gates, Filipe A. Almeida Paz, Barbara M. Harvey, Jonathan B. Spencer, and Andrew R. Gallimore
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Chemistry ,Stereochemistry ,Hydrogen bond ,Sodium ,Monensin ,chemistry.chemical_element ,General Chemistry ,Crystal structure ,Condensed Matter Physics ,law.invention ,chemistry.chemical_compound ,Crystallography ,Octahedron ,law ,Group (periodic table) ,General Materials Science ,Orthorhombic crystal system ,Crystallization - Abstract
The crystal structure of the title compound, [Na(C36H61O11)]·2H2O, was first reported by Duax et al. [J. Am. Chem. Soc. (1980), 102, 6725–6729]. We report here the crystal structure of a new polymorph, determined at the low temperature of 180 (2) K, in the same orthorhombic non-centrosymmetric space group P212121. The structure contains one crystallographically unique sodium monensin complex, showing a highly distorted octahedral coordination environment for Na+, forming undulating layers in the ac plane. H atoms from the pendant hydroxyl groups involved in head-to-tail hydrogen bonding with the carboxylate group and from the crystallization water molecules occupying the interlayer spaces have been successfully located in difference Fourier maps.
- Published
- 2003
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17. Sequence of the region downstream of the Vitreoscilla hemoglobin gene: vgb is not part of a multigene operon
- Author
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S.-C. Liu, Y.-X. Liu, D. A. Webster, and B. C. Stark
- Subjects
General Medicine ,Applied Microbiology and Biotechnology ,Biotechnology - Published
- 1994
- Full Text
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18. Analysis of the biosynthetic gene cluster for the polyether antibiotic monensin in Streptomyces cinnamonensis and evidence for the role of monB and monC genes in oxidative cyclization
- Author
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Markiyan, Oliynyk, Christian B W, Stark, Apoorva, Bhatt, Michelle A, Jones, Zoë A, Hughes-Thomas, Christopher, Wilkinson, Zoryana, Oliynyk, Yuliya, Demydchuk, James, Staunton, and Peter F, Leadlay
- Subjects
DNA, Bacterial ,Epoxide Hydrolases ,Base Sequence ,Molecular Sequence Data ,Steroid Isomerases ,Gene Expression Regulation, Bacterial ,Methyltransferases ,Streptomyces ,Mixed Function Oxygenases ,Cyclization ,Genes, Bacterial ,Multienzyme Complexes ,Drug Resistance, Bacterial ,Gene Order ,Genes, Regulator ,Thiolester Hydrolases ,Fatty Acid Synthases ,Monensin ,Oxidoreductases ,Oxidation-Reduction ,Gene Deletion - Abstract
The analysis of a candidate biosynthetic gene cluster (97 kbp) for the polyether ionophore monensin from Streptomyces cinnamonensis has revealed a modular polyketide synthase composed of eight separate multienzyme subunits housing a total of 12 extension modules, and flanked by numerous other genes for which a plausible function in monensin biosynthesis can be ascribed. Deletion of essentially all these clustered genes specifically abolished monensin production, while overexpression in S. cinnamonensis of the putative pathway-specific regulatory gene monR led to a fivefold increase in monensin production. Experimental support is presented for a recently-proposed mechanism, for oxidative cyclization of a linear polyketide intermediate, involving four enzymes, the products of monBI, monBII, monCI and monCII. In frame deletion of either of the individual genes monCII (encoding a putative cyclase) or monBII (encoding a putative novel isomerase) specifically abolished monensin production. Also, heterologous expression of monCI, encoding a flavin-linked epoxidase, in S. coelicolor was shown to significantly increase the ability of S. coelicolor to epoxidize linalool, a model substrate for the presumed linear polyketide intermediate in monensin biosynthesis.
- Published
- 2003
19. Vitreoscilla hemoglobin. Intracellular localization and binding to membranes
- Author
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Ramandeep, K W, Hwang, M, Raje, K J, Kim, B C, Stark, K L, Dikshit, and D A, Webster
- Subjects
Cytoplasm ,Hemoglobins ,Membranes ,Cell Membrane ,Vitreoscilla ,Escherichia coli ,Animals ,Horses - Abstract
The obligate aerobic bacterium, Vitreoscilla, synthesizes elevated quantities of a homodimeric hemoglobin (VHb) under hypoxic growth conditions. Expression of VHb in heterologous hosts often enhances growth and product formation. A role in facilitating oxygen transfer to the respiratory membranes is one explanation of its cellular function. Immunogold labeling of VHb in both Vitreoscilla and recombinant Escherichia coli bearing the VHb gene clearly indicated that VHb has a cytoplasmic (not periplasmic) localization and is concentrated near the periphery of the cytosolic face of the cell membrane. OmpA signal-peptide VHb fusions were transported into the periplasm in E. coli, but this did not confer any additional growth advantage. The interaction of VHb with respiratory membranes was also studied. The K(d) values for the binding of VHb to Vitreoscilla and E. coli cell membranes were approximately 5-6 microm, a 4-8-fold higher affinity than those of horse myoglobin and hemoglobin for these same membranes. VHb stimulated the ubiquinol-1 oxidase activity of inverted Vitreoscilla membranes by 68%. The inclusion of Vitreoscilla cytochrome bo in proteoliposomes led to 2.4- and 6-fold increases in VHb binding affinity and binding site number, respectively, relative to control liposomes, suggesting a direct interaction between VHb and cytochrome bo.
- Published
- 2001
20. Engineering of complex polyketide biosynthesis--insights from sequencing of the monensin biosynthetic gene cluster
- Author
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Michelle A. Jones, J. Staunton, H. A. I. Mcarthur, Christian B. W. Stark, Elizabeth J. Frost, J. B. Lester, Jesus Cortes, Christopher J. Wilkinson, Ellen L. McCormick, Peter F. Leadlay, Christian Bisang, Steven G. Kendrew, Zoë A. Hughes-Thomas, Markiyan Oliynyk, Z. Oliynyk, and Paul F. Long
- Subjects
biology ,Stereochemistry ,Monensin ,Bioengineering ,Protein engineering ,Multifunctional Enzymes ,Sequence Analysis, DNA ,Steroid biosynthesis ,Protein Engineering ,Applied Microbiology and Biotechnology ,Streptomyces ,chemistry.chemical_compound ,Polyketide ,Biosynthesis ,chemistry ,Biochemistry ,Genes, Bacterial ,Multienzyme Complexes ,Polyketide synthase ,Multigene Family ,Gene cluster ,biology.protein ,Biotechnology - Abstract
The biosynthesis of complex reduced polyketides is catalysed in actinomycetes by large multifunctional enzymes, the modular Type I polyketide synthases (PKSs). Most of our current knowledge of such systems stems from the study of a restricted number of macrolide-synthesising enzymes. The sequencing of the genes for the biosynthesis of monensin A, a typical polyether ionophore polyketide, provided the first genetic evidence for the mechanism of oxidative cyclisation through which polyethers such as monensin are formed from the uncyclised products of the PKS. Two intriguing genes associated with the monensin PKS cluster code for proteins, which show strong homology with enzymes that trigger double bond migrations in steroid biosynthesis by generation of an extended enolate of an unsaturated ketone residue. A similar mechanism operating at the stage of an enoyl ester intermediate during chain extension on a PKS could allow isomerisation of an E double bond to the Z isomer. This process, together with epoxidations and cyclisations, form the basis of a revised proposal for monensin formation. The monensin PKS has also provided fresh insight into general features of catalysis by modular PKSs, in particular into the mechanism of chain initiation.
- Published
- 2001
21. Surface transfer doping of hydrogen-terminated diamond by C60F48: Energy level scheme and doping efficiency
- Author
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Martina Wanke, Lothar Ley, Alex Schenk, H M Vulling, Kevin J. Rietwyk, Qihui Wu, Peter Sharp, Yaou Smets, Christian B W Stark, Anton Tadich, Mark T. Edmonds, and Christopher Ian Pakes
- Subjects
Dipole ,Band bending ,X-ray photoelectron spectroscopy ,Chemistry ,Ionization ,Doping ,General Physics and Astronomy ,Surface charge ,Physical and Theoretical Chemistry ,Atomic physics ,Acceptor ,HOMO/LUMO - Abstract
Surface sensitive C1s core level photoelectron spectroscopy was used to examine the electronic properties of C(60)F(48) molecules on the C(100):H surface. An upward band bending of 0.74 eV in response to surface transfer doping by fluorofullerene molecules is measured. Two distinct molecular charge states of C(60)F(48) are identified and their relative concentration determined as a function of coverage. One corresponds to ionized molecules that participate in surface charge transfer and the other to neutral molecules that do not. The position of the lowest unoccupied molecular orbital of neutral C(60)F(48) which is the relevant acceptor level for transfer doping lies initially 0.6 eV below the valence band maximum and shifts upwards in the course of transfer doping by up to 0.43 eV due to a doping induced surface dipole. This upward shift in conjunction with the band bending determines the occupation of the acceptor level and limits the ultimately achievable hole concentration with C(60)F(48) as a surface acceptor to values close to 10(13) cm(-2) as reported in the literature.
- Published
- 2012
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22. Understanding Selectivities in Ligand-free Oxidative Cyclizations of 1,5- and 1,6-Dienes with RuO4 from Density Functional Theory
- Author
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Barbara Kirchner, Stefan Zahn, Philipp J. di Dio, and Christian B. W. Stark
- Subjects
Oxidative cyclization ,Computational chemistry ,Chemistry ,Ligand ,Density functional theory ,General Chemistry ,Oxidative phosphorylation ,Cycloaddition - Abstract
Quantum-chemical calculations using density functional theory were carried out to investigate the mechanism of the oxidative cyclization of 1,5- and 1,6-dienes with ruthenium tetroxide. Current experimental results show different selectivities for the formation of tetrahydrofuran and tetrahydropyran derivatives. Our theoretical data correctly reproduce the experimental selectivities. Transition structures for the first [3+2]-cycloaddition of RuO4 with ethene and for the second [3+2]- cycloaddition with two ethene molecules, 1,5-hexadiene, and 1,6-heptadiene were calculated. For the formation of tetrahydrofuran and tetrahydropyran derivatives we observed two reaction pathways. The transition structure for the formation of cis-tetrahydrofuran derivatives was found to be more stable than the trans-tetrahydrofuran-forming transition structure by about 40 kJ mol−1. By comparison to the reaction with two ethene molecules it was shown that the linking alkyl chain causes the energy gap between stereoisomers by a directing influence. In the tetrahydropyran reaction the transtetrahydropyran- forming transition structure was less than 4 kJ mol−1 more stable than the transition structure leading to the cis-tetrahydropyran. The obtained geometries showed that for tetrahydropyrans the energy gap between stereoisomers is not caused by the linking alkyl chain.
- Published
- 2010
- Full Text
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23. The cutoff frequency for fast-mode magnetohydrodynamic waves in an isothermal atmosphere with a uniform horizontal magnetic field
- Author
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Zdzislaw E. Musielak and B. A. Stark
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Physics ,Wave propagation ,Stellar atmosphere ,Astronomy and Astrophysics ,Wave equation ,Cutoff frequency ,Computational physics ,Classical mechanics ,Critical frequency ,Space and Planetary Science ,Reflection (physics) ,Astrophysics::Solar and Stellar Astrophysics ,Magnetohydrodynamic drive ,Magnetohydrodynamics - Abstract
This study analytically examines conditions for reflection of MHD fast-mode waves propagating upward in an isothermal atmosphere. A new method of transforming the linearized wave equation into Klein-Gordon form is utilized to calculate a local cutoff (critical) frequency for these waves. This critical frequency determines the height in the atmosphere at which reflection dominates and above which wave propagation is effectively cut off. Comparison of our results to those previously obtained shows that earlier calculations of the critical frequency for MHD fast mode waves were done incorrectly. The results may be helpful in explaining the short-period end of the spectrum of the solar global p-mode oscillations. They may also be important in studies of wave propagation and wave trapping in highly magnetized stellar atmospheres.
- Published
- 1993
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24. Isolation and characterization of cloned DNA sequences containing ribosomal protein genes of Drosophila melanogaster
- Author
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M D Macklin, D K Burns, B C Stark, and W Y Chooi
- Subjects
Polytene chromosome ,Cell Biology ,Ribosomal RNA ,Biology ,Molecular biology ,law.invention ,chemistry.chemical_compound ,chemistry ,Ribosomal protein ,law ,Complementary DNA ,Recombinant DNA ,Genomic library ,Molecular Biology ,Gene ,DNA - Abstract
Ribosomal (r) proteins encoded by polyadenylated RNA were specifically precipitated in vitro from polysomes by using antibodies raised against characterized Drosophila melanogaster r proteins. The immuno-purified mRNA in the polysome complex was used to prepare cDNA with which to probe a D. melanogaster genomic library. Selected recombinant phages were used to hybrid select mRNAs, which were analyzed by in vitro translation. Three clones containing the genes for r proteins 7/8, S18, and L12 were positively identified by electrophoresis of the translation products in one-dimensional and two-dimensional polyacrylamide gels. Sequences encoding r proteins S18 and L12 were found to be present in the genome in single copies. In contrast, the polynucleotide containing the region encoding 7/8 may be repeated or may contain or be flanked by short repeated sequences. The sizes of mRNAs that hybridized to the recombinant clone containing 7/8 were significantly larger than would be expected from the molecular weight of protein 7/8, implying that there were unusually long 5' and 3' noncoding sequences. The mRNAs for r proteins S18 and L12 were however, only about 10% larger. In situ hybridizations to salivary gland polytene chromosomes, using the recombinant phage, revealed that the recombinant clone containing the gene for r protein 7/8 hybridized to 5D on the X chromosome; the recombinant clone containing the gene for S18 hybridized to 15B on the same chromosome, and the recombinant phage containing the gene for L12 hybridized to 62E on chromosome 3L. It is of interest that the genomic locations of all three r protein clones were within the chromosomal intervals known to contain the Minute mutations [M(1)0, M(1)30, and M(3)LS2]. Although each clone contained sequences specifying two to four proteins, none had more than one identifiable r protein gene, suggesting that different D. melanogaster r protein genes may not be closely linked.
- Published
- 1984
- Full Text
- View/download PDF
25. Egg morphology and classification of Perlodinae (Plecoptera : Perlodidae)
- Author
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S W Szczytko and B P Stark
- Subjects
Perlodidae ,Sensu ,Diploperlini ,Perlodinae ,Zoology ,Taxonomy (biology) ,Arcynopterygini ,Aquatic Science ,Biology ,biology.organism_classification - Abstract
A new classification of Perlodinae (sensu Zwick 1973) is proposed in which three tribes are recognized. Arcynopterygini Ricker & Scudder includes genera whose eggs are circular in cross section while Perlodini Klapalek and Diploperlini, new tribe, include genera whose eggs are triangular or semicircular in cross section.
- Published
- 1984
- Full Text
- View/download PDF
26. Marginality Associated with Interorganizational Linking Process, Productivity, and Satisfaction
- Author
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H. O. Pruden and B. J. Stark
- Subjects
Management of Technology and Innovation ,Strategy and Management ,Business and International Management ,General Business, Management and Accounting - Published
- 1971
- Full Text
- View/download PDF
27. Marginality and Integrative Management Positions
- Author
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R. C. Ziller, Henry O. Pruden, and B. J. Stark
- Subjects
Management of Technology and Innovation ,Strategy and Management ,media_common.quotation_subject ,Personality ,Gender studies ,Organizational structure ,Sociology ,Business and International Management ,General Business, Management and Accounting ,Work environment ,media_common - Abstract
The marginality component of personality appears appropriate for men who hold integrative management positions. Research reveals an association between the Self-Other Orientation measure of margina...
- Published
- 1969
- Full Text
- View/download PDF
28. MARGINALITY ASSOCIATED WITH INTERORGANIZATIONAL LINKING PROCESS, PRODUCTIVITY, AND SATISFACTION
- Author
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Henry O. Pruden and B. J. Stark
- Subjects
Process (engineering) ,Organizational behavior ,Management of Technology and Innovation ,Strategy and Management ,Industrial management ,Job satisfaction ,Business ,Business and International Management ,General Business, Management and Accounting ,Productivity ,Industrial organization ,Sales personnel - Abstract
The article reports on the concept of marginality as it applies to industrial organization and industrial management. The author focuses on ways in which marginality affects job satisfaction and in...
- Published
- 1971
- Full Text
- View/download PDF
29. Evidence for the Role of the monB Genes in Polyether Ring Formation during Monensin Biosynthesis
- Author
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Christian B. W. Stark, Yuliya Demydchuk, Daniel J. Fowler, Jonathan B. Spencer, Apoorva Bhatt, James Staunton, Victor M. Bolanos-Garcia, Barbara M. Harvey, Andrew R. Gallimore, and Peter F. Leadlay
- Subjects
DNA, Bacterial ,Models, Molecular ,MICROBIO ,Stereochemistry ,Clinical Biochemistry ,Molecular Sequence Data ,Epoxide ,Biochemistry ,chemistry.chemical_compound ,Polyketide ,Bacterial Proteins ,Species Specificity ,Hydrolase ,Gene cluster ,Drug Discovery ,Rhodococcus ,Scattering, Radiation ,Amino Acid Sequence ,Monensin ,Molecular Biology ,chemistry.chemical_classification ,Pharmacology ,Epoxide Hydrolases ,Base Sequence ,Sequence Homology, Amino Acid ,General Medicine ,Streptomyces ,Amino acid ,Enzyme ,CHEMBIO ,chemistry ,Genes, Bacterial ,Molecular Medicine ,Gene Deletion - Abstract
SummaryIonophoric polyethers are produced by the exquisitely stereoselective oxidative cyclization of a linear polyketide, probably via a triepoxide intermediate. We report here that deletion of either or both of the monBI and monBII genes from the monensin biosynthetic gene cluster gave strains that produced, in place of monensins A and B, a mixture of C-3-demethylmonensins and a number of minor components, including C-9-epi-monensin A. All the minor components were efficiently converted into monensins by subsequent acid treatment. These data strongly suggest that epoxide ring opening and concomitant polyether ring formation are catalyzed by the MonB enzymes, rather than by the enzyme MonCII as previously thought. Consistent with this, homology modeling shows that the structure of MonB-type enzymes closely resembles the recently determined structure of limonene-1,2-epoxide hydrolase from Rhodococcus erythropolis.
- Full Text
- View/download PDF
30. Reproductive System and Mating of Hydroperla crosbyi: A Newly Discovered Method of Sperm Transfer in Insecta
- Author
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K. W. Stewart and B. P. Stark
- Subjects
biology ,media_common.quotation_subject ,Anatomy ,biology.organism_classification ,Hydroperla crosbyi ,Sperm ,Perlodidae ,Aedeagus ,Reproductive system ,Mating ,Reproduction ,Ecology, Evolution, Behavior and Systematics ,Intromittent organ ,media_common - Abstract
The internal reproductive systems of both sexes of Hydroperla crosbyi (Needham and Claassen) are generally similar to those of Arcynopteryx compacta (McLachl.). Sperm transfer is external, to a depression around the female genital opening formed by a 'packing action" of the male epiproct during what appears superficially to be copulation. Sperm are deposited in the depression after a spontaneous aedeagal eversion lasting 0.5-1.5 min. The aedeagus does not function as an intromittent organ. Sperm are aspirated by the female after the releaser consisting of cercal brushing or tapping by the male. This represents a previously unreported means of sperm conveyance in the Plecoptera and among the Insecta. Potential contribution of reproduction knowledge to phylogeny in the Perlodidae is discussed.
- Published
- 1977
- Full Text
- View/download PDF
31. A Painter's Discussion of Contemporary Aesthetics
- Author
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B. George Stark
- Subjects
Warrant ,Painting ,Visual Arts and Performing Arts ,media_common.quotation_subject ,Art ,The arts ,Everyday Aesthetics ,Computer Science Applications ,Contemporary art ,Visual arts ,Dilemma ,Work of art ,Aesthetics ,Engineering (miscellaneous) ,Music ,media_common - Abstract
The author stresses the major role of art in society and the importance of the relationships between a work of art, its maker and the public. The relations between philosophy and art in the past are contrasted with the separation existing between the arts, aesthetics and science, and between contemporary artists and aestheticians. The heart of the dilemma for aesthetics is pointed out as being the multiplicity of styles that have emerged during this century. Some of the reasons for the existence of so many styles are discussed. The debate that has been going on in Leonardo between aestheticians and artists is summarized and commented upon. Important issues that warrant aesthetic investigation are brought out. The influence of aesthetic hypotheses on the author's own work as a painter is described. She concludes that perhaps it is not aesthetics as a theorizing discipline that the contemporary artist refuses to take seriously but rather many of today's aestheticians.
- Published
- 1972
- Full Text
- View/download PDF
32. Design of an Inductive Power Transfer System with Flexible Coils for Body-worn Applications.
- Author
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L R Clare, S G Burrow, B H Stark, N J Grabham, and S P Beeby
- Published
- 2015
- Full Text
- View/download PDF
33. Near field wireless power transfer using curved relay resonators for extended transfer distance.
- Author
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D Zhu, L Clare, B H Stark, and S P Beeby
- Published
- 2015
- Full Text
- View/download PDF
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