Search

Your search keyword '"Bonačić Marinović, Axel"' showing total 30 results
Start Over Author "Bonačić Marinović, Axel" Search Limiters Available in Library Collection
30 results on '"Bonačić Marinović, Axel"'

6. A statistical modelling approach for source attribution meta-analysis of sporadic infection with foodborne pathogens

Author

Mughini-Gras, Lapo, Benincà, Elisa, McDonald, Scott A, de Jong, Aarieke, Chardon, Jurgen, Evers, Eric, Bonačić Marinović, Axel A, IRAS OH Epidemiology Microbial Agents, and IRAS OH Epidemiology Microbial Agents

Subjects
Listeria, Swine, Epidemiology, Discover, Bayesian inference, Cattle Diseases, Sheep Diseases, Modelling, Foodborne Diseases, Models, Salmonella, Escherichia coli, Animals, Ovum, Swine Diseases, Models, Statistical, Sheep, Source attribution, General Veterinary, General Immunology and Microbiology, Foodborne Diseases/epidemiology, Public Health, Environmental and Occupational Health, Bayes Theorem, Campylobacter, Statistical, Meta-analysis, Infectious Diseases, Food Microbiology, Cattle
Abstract

Numerous source attribution studies for foodborne pathogens based on epidemiological and microbiological methods are available. These studies provide empirical data for modelling frameworks that synthetize the quantitative evidence at our disposal and reduce reliance on expert elicitations. Here, we develop a statistical model within a Bayesian estimation framework to integrate attribution estimates from expert elicitations with estimates from microbial subtyping and case-control studies for sporadic infections with four major bacterial zoonotic pathogens in the Netherlands (Campylobacter, Salmonella, Shiga toxin-producing E. coli [STEC] O157 and Listeria). For each pathogen, we pooled the published fractions of human cases attributable to each animal reservoir from the microbial subtyping studies, accounting for the uncertainty arising from the different typing methods, attribution models, and year(s) of data collection. We then combined the population attributable fractions (PAFs) from the case-control studies according to five transmission pathways (domestic food, environment, direct animal contact, human-human transmission and travel) and 11 groups within the foodborne pathway (beef/lamb, pork, poultry meat, eggs, dairy, fish/shellfish, fruit/vegetables, beverages, grains, composite foods and food handlers/vermin). The attribution estimates were biologically plausible, allowing the human cases to be attributed in several ways according to reservoirs, transmission pathways and food groups. All pathogens were predominantly foodborne, with Campylobacter being mostly attributable to the chicken reservoir, Salmonella to pigs (albeit closely followed by layers), and Listeria and STEC O157 to cattle. Food-wise, the attributions reflected those at the reservoir level in terms of ranking. We provided a modelling solution to reach consensus attribution estimates reflecting the empirical evidence in the literature that is particularly useful for policy-making and is extensible to other pathogens and domains.

Published
2022

8. Long-Term Immunogenicity upon Pertussis Booster Vaccination in Young Adults and Children in Relation to Priming Vaccinations in Infancy

Author

Immuno/reuma onderzoek 7 (Montfrans), Onderzoek, Child Health, Infection & Immunity, Cluster B, Versteegen, Pauline, Bonačić Marinović, Axel A., van Gageldonk, Pieter G.M., van der Lee, Saskia, Hendrikx, Lotte H., Sanders, Elisabeth A.M., Berbers, Guy A.M., Buisman, Anne Marie, Immuno/reuma onderzoek 7 (Montfrans), Onderzoek, Child Health, Infection & Immunity, Cluster B, Versteegen, Pauline, Bonačić Marinović, Axel A., van Gageldonk, Pieter G.M., van der Lee, Saskia, Hendrikx, Lotte H., Sanders, Elisabeth A.M., Berbers, Guy A.M., and Buisman, Anne Marie

Published
2022

10. Test, trace, isolate: Evidence for declining SARS-CoV-2 PCR sensitivity in a clinical cohort

Author

Bergmans, Barbara J.M., Reusken, Chantal B.E.M., Van Oudheusden, Anne J.G., Godeke, Gert-Jan, Bonačić Marinović, Axel A., De Vries, Esther, Kluiters-de Hingh, Yvette C.M., Vingerhoets, Ralf, Berrevoets, Marvin A.H., Verweij, Jaco J., Nieman, An-Emmie, Reimerink, Johan, Murk, Jean-Luc., Swart, Arno, Bergmans, Barbara J.M., Reusken, Chantal B.E.M., Van Oudheusden, Anne J.G., Godeke, Gert-Jan, Bonačić Marinović, Axel A., De Vries, Esther, Kluiters-de Hingh, Yvette C.M., Vingerhoets, Ralf, Berrevoets, Marvin A.H., Verweij, Jaco J., Nieman, An-Emmie, Reimerink, Johan, Murk, Jean-Luc., and Swart, Arno

Abstract

Real-time reverse transcription-polymerase chain reaction (RT-PCR) on upper respiratory tract (URT) samples is the primary method to diagnose SARS-CoV-2 infections and guide public health measures, with a supportive role for serology. We reinforce previous findings on limited sensitivity of PCR testing, and solidify this fact by statistically utilizing a firm basis of multiple tests per individual. We integrate stratifications with respect to several patient characteristics such as severity of disease and time since onset of symptoms. Bayesian statistical modelling was used to retrospectively determine the sensitivity of RT-PCR using SARS-CoV-2 serology in 644 COVID-19-suspected patients with varying degrees of disease severity and duration. The sensitivity of RT-PCR ranged between 80% − 95%; increasing with disease severity, it decreased rapidly over time in mild COVID-19 cases. Negative URT RT-PCR results should be interpreted in the context of clinical characteristics, especially with regard to containment of viral transmission based on ‘test, trace and isolate’.

Published
2021

11. Different Long-Term Duration of Seroprotection against Neisseria meningitidis in Adolescents and Middle-Aged Adults after a Single Meningococcal ACWY Conjugate Vaccination in The Netherlands

Author

Ohm, Milou, primary, van Rooijen, Debbie M., additional, Bonačić Marinović, Axel A., additional, van Ravenhorst, Mariëtte B., additional, van der Heiden, Marieke, additional, Buisman, Anne-Marie, additional, Sanders, Elisabeth A.M., additional, and Berbers, Guy A.M., additional

Published
2020
Full Text
View/download PDF

13. A social cost-benefit analysis of two One Health interventions to prevent toxoplasmosis

Author

Suijkerbuijk, Anita W. M., primary, Over, Eelco A. B., additional, Opsteegh, Marieke, additional, Deng, Huifang, additional, Gils, Paul F. van, additional, Bonačić Marinović, Axel A., additional, Lambooij, Mattijs, additional, Polder, Johan J., additional, Feenstra, Talitha L., additional, Giessen, Joke W. B. van der, additional, Wit, G. Ardine de, additional, and Mangen, Marie-Josee J., additional

Published
2019
Full Text
View/download PDF

14. A social cost-benefit analysis of two One Health interventions to prevent toxoplasmosis

Author

Suijkerbuijk, Anita W M, Over, Eelco A B, Opsteegh, Marieke, Deng, Huifang, Gils, Paul F van, Bonačić Marinović, Axel A, Lambooij, Mattijs, Polder, Johan J, Feenstra, Talitha L, Giessen, Joke W B van der, Wit, G Ardine de, Mangen, Marie-Josee J, Suijkerbuijk, Anita W M, Over, Eelco A B, Opsteegh, Marieke, Deng, Huifang, Gils, Paul F van, Bonačić Marinović, Axel A, Lambooij, Mattijs, Polder, Johan J, Feenstra, Talitha L, Giessen, Joke W B van der, Wit, G Ardine de, and Mangen, Marie-Josee J

Published
2019

16. Timeliness of infectious disease reporting, the Netherlands, 2003 to 2017: law change reduced reporting delay, disease identification delay is next

Author

Epi Infectieziekten Team 2, Infection & Immunity, JC onderzoeksprogramma Infectieziekten, Swaan, Corien M, Wong, Albert, Bonačić Marinović, Axel, Kretzschmar, Mirjam Ee, van Steenbergen, Jim E, Epi Infectieziekten Team 2, Infection & Immunity, JC onderzoeksprogramma Infectieziekten, Swaan, Corien M, Wong, Albert, Bonačić Marinović, Axel, Kretzschmar, Mirjam Ee, and van Steenbergen, Jim E

Published
2019

17. A social cost-benefit analysis of two One Health interventions to prevent toxoplasmosis

Author

Healthcare Innovation & Evaluation, HEE Team 1, JC onderzoeksprogramma Methodology, Circulatory Health, HEE, Suijkerbuijk, Anita W M, Over, Eelco A B, Opsteegh, Marieke, Deng, Huifang, Gils, Paul F van, Bonačić Marinović, Axel A, Lambooij, Mattijs, Polder, Johan J, Feenstra, Talitha L, Giessen, Joke W B van der, Wit, G Ardine de, Mangen, Marie-Josee J, Healthcare Innovation & Evaluation, HEE Team 1, JC onderzoeksprogramma Methodology, Circulatory Health, HEE, Suijkerbuijk, Anita W M, Over, Eelco A B, Opsteegh, Marieke, Deng, Huifang, Gils, Paul F van, Bonačić Marinović, Axel A, Lambooij, Mattijs, Polder, Johan J, Feenstra, Talitha L, Giessen, Joke W B van der, Wit, G Ardine de, and Mangen, Marie-Josee J

Published
2019

18. The design of a Social Cost-Benefit Analysis of preventive interventions for toxoplasmosis : An example of the One Health approach

Author

Suijkerbuijk, Anita W M, van Gils, P.F., Bonačić Marinović, Axel, Feenstra, T L, Kortbeek, Laetitia M., Mangen, M-J J, Opsteegh, M, de Wit, G A, van der Giessen, J W B, Suijkerbuijk, Anita W M, van Gils, P.F., Bonačić Marinović, Axel, Feenstra, T L, Kortbeek, Laetitia M., Mangen, M-J J, Opsteegh, M, de Wit, G A, and van der Giessen, J W B

Published
2018

19. Detection of opsonizing antibodies directed against a recently circulating Bordetella pertussis strain in paired plasma samples from symptomatic and recovered pertussis patients

Author

One Health Microbieel, dIRAS RA-I&I I&I, Hovingh, Elise S., Kuipers, Betsy, Bonačić Marinović, Axel A., Jan Hamstra, Hendrik, Hijdra, Danielle, Mughini Gras, Lapo, van Twillert, Inonge, Jongerius, Ilse, van Els, Cecile A.C.M., Pinelli, Elena, One Health Microbieel, dIRAS RA-I&I I&I, Hovingh, Elise S., Kuipers, Betsy, Bonačić Marinović, Axel A., Jan Hamstra, Hendrik, Hijdra, Danielle, Mughini Gras, Lapo, van Twillert, Inonge, Jongerius, Ilse, van Els, Cecile A.C.M., and Pinelli, Elena

Published
2018

20. The design of a Social Cost-Benefit Analysis of preventive interventions for toxoplasmosis: An example of the One Health approach

Author

HEE, Circulatory Health, JC onderzoeksprogramma Methodologie, Suijkerbuijk, Anita W M, van Gils, P.F., Bonačić Marinović, Axel, Feenstra, T L, Kortbeek, Laetitia M., Mangen, M-J J, Opsteegh, M, de Wit, G A, van der Giessen, J W B, HEE, Circulatory Health, JC onderzoeksprogramma Methodologie, Suijkerbuijk, Anita W M, van Gils, P.F., Bonačić Marinović, Axel, Feenstra, T L, Kortbeek, Laetitia M., Mangen, M-J J, Opsteegh, M, de Wit, G A, and van der Giessen, J W B

Published
2018

22. Impact of age and vaccination history on long-term serological responses after symptomatic B. pertussis infection, a high dimensional data analysis

Author

Immuno/reuma onderzoek 7 (Montfrans), Infection & Immunity, Child Health, Immuno/reuma patientenzorg, van Twillert, Inonge, Bonačić Marinović, Axel A, Kuipers, Betsy, van Gaans-van den Brink, Jacqueline A M, Sanders, Elisabeth A M, van Els, Cécile A C M, Immuno/reuma onderzoek 7 (Montfrans), Infection & Immunity, Child Health, Immuno/reuma patientenzorg, van Twillert, Inonge, Bonačić Marinović, Axel A, Kuipers, Betsy, van Gaans-van den Brink, Jacqueline A M, Sanders, Elisabeth A M, and van Els, Cécile A C M

Published
2017

24. The Use of Innovative Two-Component Cluster Analysis and Serodiagnostic Cut-Off Methods to Estimate Prevalence of Pertussis Reinfections

Author

van Twillert, Inonge, primary, Bonačić Marinović, Axel A., additional, van Gaans-van den Brink, Jacqueline A. M., additional, Kuipers, Betsy, additional, Berbers, Guy A. M., additional, van der Maas, Nicoline A. T., additional, Verheij, Theo J. M., additional, Versteegh, Florens G. A., additional, Teunis, Peter F. M., additional, and van Els, Cécile A. C. M., additional

Published
2016
Full Text
View/download PDF

26. Quantifying reporting timeliness to improve outbreak control

Author

Epi Infectieziekten Team 2, Infection & Immunity, Bonačić Marinović, Axel, Swaan, Corien, van Steenbergen, Jim, Kretzschmar, MEE, Epi Infectieziekten Team 2, Infection & Immunity, Bonačić Marinović, Axel, Swaan, Corien, van Steenbergen, Jim, and Kretzschmar, MEE

Published
2015

28. Effectiveness and timing of vaccination during school measles outbreak.

Author

Marinovic AA, Swaan C, Wichmann O, van Steenbergen J, Kretzschmar M, Bonačić Marinović, Axel Antonio, Swaan, Corien, Wichmann, Ole, van Steenbergen, Jim, and Kretzschmar, Mirjam

Abstract

Despite high vaccination coverage in most European countries, large community outbreaks of measles do occur, normally clustered around schools and resulting from suboptimal vaccination coverage. To determine whether or when it is worth implementing outbreak-response vaccination campaigns in schools, we used stochastic outbreak models to reproduce a public school outbreak in Germany, where no vaccination campaign was implemented. We assumed 2 scenarios covering the baseline vaccination ratio range (91.3%-94.3%) estimated for that school and computed outbreaks assuming various vaccination delays. In one scenario, reacting (i.e., implementing outbreak-response vaccination campaigns) within 12-24 days avoided large outbreaks and reacting within 50 days reduced outbreak size. In the other scenario, reacting within 6-14 days avoided large outbreaks and reacting within 40 days reduced the outbreak size. These are realistic time frames for implementing school outbreak response vaccination campaigns. High baseline vaccination ratios extended the time needed for effective response. [ABSTRACT FROM AUTHOR]

Published
2012
Full Text
View/download PDF

29. Prospects of toxoplasmosis control by cat vaccination.

Author

Bonačić Marinović AA, Opsteegh M, Deng H, Suijkerbuijk AWM, van Gils PF, and van der Giessen J

Abstract

Intro: Toxoplasmosis has high disease burden in the Netherlands and in the rest of Europe. It can be acquired directly by ingestion of Toxoplasma gondii (T. gondii) oocysts shed by infected cats, or indirectly via consumption of undercooked meat from infected livestock. Cat vaccination has been proposed for reducing oocyst-acquired human infections but it remains unclear whether such an intervention can be effective. In this study we quantified the effects of using cat vaccination on reducing oocyst-originated T. gondii human infections., Method: By using a disease dynamics compartmental model for T. gondii infections in cats and mice we studied the effects of a hypothetical cat vaccine on the presence of T. gondii oocysts in the environment. A fitted dose response model was used to assess the effect of oocyst reduction on the expected human infections., Results: For rats, mice and pigs, and possibly intermediate hosts in general, ingestion of one oocyst provides 30%-60% probability of T. gondii infection. Assuming a favourable ideal scenario where vaccination completely prevents oocyst shedding and predation rate is of one mouse per week per cat, eight cats can be left susceptible in order to achieve elimination and stop oocyst-originated transmission, independent of the total cat population. Considering populations of 1000, 100, 50 and 20 cats, cat vaccination coverage of 94%, 68%, 54% and 35%, respectively, would reduce expected oocyst-originated human cases by 50%., Conclusion: For attaining elimination of oocyst-originated human infections, only few cats may remain unvaccinated, regardless of the cat-population size, and only a few more cats may remain unvaccinated for reducing infections substantially. Such vaccination coverages can in practice be achieved only when small cat-populations are considered, but in larger cat-populations the large efficacy and vaccination coverage needed are unfeasible., (Copyright © 2019. Published by Elsevier B.V.)

Published
2019
Full Text
View/download PDF

30. Quantifying reporting timeliness to improve outbreak control.

Author

Bonačić Marinović A, Swaan C, van Steenbergen J, and Kretzschmar M

Subjects
Humans, Models, Statistical, Population Surveillance methods, Quality Improvement, Time Factors, Vaccination, Communicable Disease Control, Communicable Diseases epidemiology, Disease Notification, Disease Outbreaks
Abstract

The extent to which reporting delays should be reduced to gain substantial improvement in outbreak control is unclear. We developed a model to quantitatively assess reporting timeliness. Using reporting speed data for 6 infectious diseases in the notification system in the Netherlands, we calculated the proportion of infections produced by index and secondary cases until the index case is reported. We assumed interventions that immediately stop transmission. Reporting delays render useful only those interventions that stop transmission from index and secondary cases. We found that current reporting delays are adequate for hepatitis A and B control. However, reporting delays should be reduced by a few days to improve measles and mumps control, by at least 10 days to improve shigellosis control, and by at least 5 weeks to substantially improve pertussis control. Our method provides quantitative insight into the required reporting delay reductions needed to achieve outbreak control and other transmission prevention goals.

Published
2015
Full Text
View/download PDF

Catalog

Books, media, physical & digital resources
See catalog results