1,282 results on '"Facteur climatique"'
Search Results
2. Mosquito dynamics and their drivers in peri-urban Antananarivo, Madagascar: Insights from a longitudinal multi-host single-site survey
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Tantely, Luciano Michaël, Guis, Hélène, Raharinirina, Manou Rominah, Ambinintsoa, Maminirina Fidelis, Randriananjantenaina, Iavonirina, Velonirina, Haja Johnson, Révillion, Christophe, Herbreteau, Vincent, Tran, Annelise, Girod, Romain, Tantely, Luciano Michaël, Guis, Hélène, Raharinirina, Manou Rominah, Ambinintsoa, Maminirina Fidelis, Randriananjantenaina, Iavonirina, Velonirina, Haja Johnson, Révillion, Christophe, Herbreteau, Vincent, Tran, Annelise, and Girod, Romain
- Abstract
Background: Antananarivo, the capital city of Madagascar, is experiencing a steady increase in population growth. Due to the abundance of mosquito vectors in this locality, the population exposed to mosquito-borne diseases is therefore also increasing, as is the risk of epidemic episodes. The aim of the present study was to assess, in a resource-limited setting, the information on mosquito population dynamics and disease transmission risk that can be provided through a longitudinal entomological study carried out in a multi-host single site. Methods: Mosquitoes were collected every 15 days over 16 months (from January 2017 to April 2018) using six CDC-light traps in a peri-urban area of Antananarivo. Multivariable generalised linear models were developed using indoor and outdoor densities of the predominant mosquito species as response variables and moon illumination, environmental data and climatic data as the explanatory variables. Results: Overall, 46,737 mosquitoes belonging to at least 20 species were collected, of which Culex antennatus (68.9%), Culex quinquefasciatus (19.8%), Culex poicilipes (3.7%) and Anopheles gambiae sensu lato (2.3%) were the most abundant species. Mosquito densities were observed to be driven by moon illumination and climatic factors interacting at different lag periods. The outdoor models demonstrated biweekly and seasonal patterns of mosquito densities, while the indoor models demonstrated only a seasonal pattern. Conclusions: An important diversity of mosquitoes exists in the peri-urban area of Antananarivo. Some well-known vector species, such as Cx. antennatus, a major vector of West Nile virus (WNV) and Rift-Valley fever virus (RVFV), Cx. quinquefasciatus, a major vector of WNV, Cx. poicilipes, a candidate vector of RVFV and An. gambiae sensu lato, a major vector of Plasmodium spp., are abundant. Importantly, these four mosquito species are present all year round, even though their abundance declines during the cold dry season, wi
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- 2024
3. Does seasonal flowering and fruiting patterns of cacao only depend on climatic factors? The case study of mixed genotype populations in Côte d'Ivoire
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Wibaux, Thomas, Normand, Frédéric, Vezy, Rémi, Durand, Jean-Baptiste, Lauri, Pierre-Eric, Wibaux, Thomas, Normand, Frédéric, Vezy, Rémi, Durand, Jean-Baptiste, and Lauri, Pierre-Eric
- Abstract
Theobroma cacao, a tropical cauliflorous fruit tree, typically produces flowers and fruits twice a year and exhibits alternate harvesting patterns over consecutive six-monthly seasons in regions with bi-modal rainfall distribution, such as Côte d'Ivoire. This study investigated seasonal variations in flowering and fruiting among trees in populations of mixed cacao genotypes. The intensities of crown and trunk flowering and pod production were monitored for eight consecutive six-monthly seasons on 114 adult cacao trees grown from seedlings. We investigated distributions of seasonal flowering and fruiting values, relationships between flowering and pod production, and the effects of seasonal cumulative rainfall. The patterns of seasonal flowering and fruiting series were analyzed using two descriptors: the first distinguishing between regular and variable patterns, and the second analyzing the structure of such variability, classifying it as either irregular or alternating. Despite being subjected to similar climate and agronomic management, individual trees exhibited highly variable flowering and fruiting behaviors within each season, as well as variable patterns of flowering and fruiting across seasons. Seasonal alternate fruiting on a population scale masked highly variable patterns among trees, and only 19 % of the trees exhibited marked alternate fruiting patterns. Variations in pod production on a tree scale were mainly related to variations in trunk flowering. Endogenous factors seemed to control seasonal variations in flowering and fruiting, even though exogenous factors, both climatic and agronomic, could structure flowering and fruiting patterns at the orchard scale.
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- 2024
4. Global patterns of tree wood density
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Yang, Hui, Wang, Siyuan, Son, Rackhun, lee, Hoontaek, Benson, Vitus, Zhang, Weijie, Zhang, Yahai, Zhang, Yuzhen, Kattge, Jens, Boenisch, Gerhard, Schepaschenko, Dmitry, Karaszewski, Zbigniew, Stereńczak, Krzysztof, Moreno-Martínez, Álvaro, Nabais, Cristina, Birnbaum, Philippe, Vieilledent, Ghislain, Weber, Ulrich, Carvalhais, Nuno, Yang, Hui, Wang, Siyuan, Son, Rackhun, lee, Hoontaek, Benson, Vitus, Zhang, Weijie, Zhang, Yahai, Zhang, Yuzhen, Kattge, Jens, Boenisch, Gerhard, Schepaschenko, Dmitry, Karaszewski, Zbigniew, Stereńczak, Krzysztof, Moreno-Martínez, Álvaro, Nabais, Cristina, Birnbaum, Philippe, Vieilledent, Ghislain, Weber, Ulrich, and Carvalhais, Nuno
- Abstract
Wood density is a fundamental property related to tree biomechanics and hydraulic function while playing a crucial role in assessing vegetation carbon stocks by linking volumetric retrieval and a mass estimate. This study provides a high-resolution map of the global distribution of tree wood density at the 0.01° (~1 km) spatial resolution, derived from four decision trees machine learning models using a global database of 28,822 tree-level wood density measurements. An ensemble of four top-performing models combined with eight cross-validation strategies shows great consistency, providing wood density patterns with pronounced spatial heterogeneity. The global pattern shows lower wood density values in northern and northwestern Europe, Canadian forest regions and slightly higher values in Siberia forests, western United States, and southern China. In contrast, tropical regions, especially wet tropical areas, exhibit high wood density. Climatic predictors explain 49%–63% of spatial variations, followed by vegetation characteristics (25%–31%) and edaphic properties (11%–16%). Notably, leaf type (evergreen vs. deciduous) and leaf habit type (broadleaved vs. needleleaved) are the most dominant individual features among all selected predictive covariates. Wood density tends to be higher for angiosperm broadleaf trees compared to gymnosperm needleleaf trees, particularly for evergreen species. The distributions of wood density categorized by leaf types and leaf habit types have good agreement with the features observed in wood density measurements. This global map quantifying wood density distribution can help improve accurate predictions of forest carbon stocks, providing deeper insights into ecosystem functioning and carbon cycling such as forest vulnerability to hydraulic and thermal stresses in the context of future climate change.
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- 2024
5. Divergence in evolutionary potential of life history traits among wild populations is predicted by differences in climatic conditions
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Chantepie, Stéphane, Charmantier, Anne, Delahaie, Boris, Adriaensen, Frank, Matthysen, Erik, Visser, Marcel E., Alvarez, Elena, Barba, Emilio, Orell, Markku, Sheldon, Ben, Ivankina, Elena, Kerimov, Anvar, Lavergne, Sébastien, Teplitsky, Céline, Chantepie, Stéphane, Charmantier, Anne, Delahaie, Boris, Adriaensen, Frank, Matthysen, Erik, Visser, Marcel E., Alvarez, Elena, Barba, Emilio, Orell, Markku, Sheldon, Ben, Ivankina, Elena, Kerimov, Anvar, Lavergne, Sébastien, and Teplitsky, Céline
- Abstract
Short-term adaptive evolution represents one of the primary mechanisms allowing species to persist in the face of global change. Predicting the adaptive response at the species level requires reliable estimates of the evolutionary potential of traits involved in adaptive responses, as well as understanding how evolutionary potential varies across a species' range. Theory suggests that spatial variation in the fitness landscape due to environmental variation will directly impact the evolutionary potential of traits. However, empirical evidence on the link between environmental variation and evolutionary potential across a species range in the wild is lacking. In this study, we estimate multivariate evolutionary potential (via the genetic variance–covariance matrix, or G-matrix) for six morphological and life history traits in 10 wild populations of great tits (Parus major) distributed across Europe. The G-matrix significantly varies in size, shape, and orientation across populations for both types of traits. For life history traits, the differences in G-matrix are larger when populations are more distant in their climatic niche. This suggests that local climates contribute to shaping the evolutionary potential of phenotypic traits that are strongly related to fitness. However, we found no difference in the overall evolutionary potential (i.e., G-matrix size) between populations closer to the core or the edge of the distribution area. This large-scale comparison of G-matrices across wild populations emphasizes that integrating variation in multivariate evolutionary potential is important to understand and predict species' adaptive responses to new selective pressures.
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- 2024
6. Refining greenhouse gas emission factors for Indonesian peatlands and mangroves to meet ambitious climate targets
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Murdiyarso, Daniel, Swails, Erin, Hergoualc'H, Kristell Anaïk, Bhomia, Rupesh, Sasmito, Sigit D., Murdiyarso, Daniel, Swails, Erin, Hergoualc'H, Kristell Anaïk, Bhomia, Rupesh, and Sasmito, Sigit D.
- Abstract
For countries' emission-reduction efforts under the Paris Agreement to be effective, baseline emission/removals levels and reporting must be as transparent and accurate as possible. For Indonesia, which holds among the largest area of tropical peatlands and mangrove forest in the world, it is particularly important for these high-carbon ecosystems to produce high-accuracy greenhouse gas inventory and to improve national forest reference emissions level/forest reference level. Here, we highlight the opportunity for refining greenhouse gas emission factors (EF) of peatlands and mangroves and describe scientific challenges to support climate policy processes in Indonesia, where 55 to 59% of national emission reduction targets by 2030 depend on mitigation in Forestry and Other Land Use. Based on the stock-difference and flux change approaches, we examine higher-tier EF for drained and rewetted peatland, peatland fires, mangrove conversions, and mangrove on peatland to improve future greenhouse gas flux reporting in Indonesia. We suggest that these refinements will be essential to support Indonesia in achieving Forest and Other Land Use net sink by 2030 and net zero emissions targets by 2060 or earlier.
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- 2024
7. Rank-based data synthesis of heterogeneous trials to identify the effects of climatic factors on the reaction of Musa genotypes to black leaf streak disease
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Brown, David, de Bruin, Sytze, De Sousa, Kauê, Abadie, Catherine, Carpentier, Sébastien Christian, Machida, Lewis, Van Etten, Jacob, Brown, David, de Bruin, Sytze, De Sousa, Kauê, Abadie, Catherine, Carpentier, Sébastien Christian, Machida, Lewis, and Van Etten, Jacob
- Abstract
Synthesis of crop trial data can generate insights that are not available from the analysis of individual studies, but such synthesis is often constrained by the heterogeneity of data among studies. Rank-based data synthesis provides the flexibility to combine data of heterogeneous types and from different sources. We demonstrate the application of rank-based data synthesis of heterogeneous trial data to assess the effect of climatic factors on the reaction of several Musa genotypes to black leaf streak disease (BLSD; caused by Pseudocercospora fijiensis [sexual morph: Mycosphaerella fijiensis]). We aggregated data from the main public repositories of Musa trial data. We applied model-based recursive partitioning with the Plackett–Luce model, using climatic data as covariates. The model identified the maximum length of the dry spell as the main variable influencing differences in genotypic response to BLSD, dividing the aggregated trial dataset into humid and dry environments. We found differences in the reaction of genotypes to BLSD between these environments. In humid environments, NARITA 8 was found to be the most resistant genotype, while in dry environments FHIA-01 was the best performing improved genotype. We also assessed reliability, which is the probability of outperforming the reference genotype (Calcutta 4). In humid environments, NARITA 2, NARITA 8, and FHIA-01 had the highest reliability, while in dry environments only the landrace Saba surpassed 50% reliability. The information generated by our data synthesis approach supports selecting Musa genotypes for further evaluations at new locations.
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- 2023
8. VectorNet: Collaborative mapping of arthropod disease vectors in Europe and surrounding areas since 2010
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Wint, William, Balenghien, Thomas, Berriatua, Eduardo, Braks, Marieta, Marsboom, Cedric, Medlock, Jolyon, Schaffner, Francis, Van Bortel, Wim, Alexander, Neil, Alten, Bulent, Czwienczek, Ewelina, Dhollander, Sofie, Ducheyne, Els, Gossner, Céline M., Hansford, Kayleigh M., Hendrickx, Guy, Honrubia, Hector, Matheussen, Tom, Mihalca, Andrei Daniel, Petric, Dusan, Richardson, Jane, Sprong, Hein, Versteirt, Veerle, Briët, Olivier, Wint, William, Balenghien, Thomas, Berriatua, Eduardo, Braks, Marieta, Marsboom, Cedric, Medlock, Jolyon, Schaffner, Francis, Van Bortel, Wim, Alexander, Neil, Alten, Bulent, Czwienczek, Ewelina, Dhollander, Sofie, Ducheyne, Els, Gossner, Céline M., Hansford, Kayleigh M., Hendrickx, Guy, Honrubia, Hector, Matheussen, Tom, Mihalca, Andrei Daniel, Petric, Dusan, Richardson, Jane, Sprong, Hein, Versteirt, Veerle, and Briët, Olivier
- Abstract
Background: Arthropod vectors such as ticks, mosquitoes, sandflies and biting midges are of public and veterinary health significance because of the pathogens they can transmit. Understanding their distributions is a key means of assessing risk. VectorNet maps their distribution in the EU and surrounding areas. Aim: We aim to describe the methodology underlying VectorNet maps, encourage standardisation and evaluate output. Methods: Vector distribution and surveillance activity data have been collected since 2010 from a combination of literature searches, field-survey data by entomologist volunteers via a network facilitated for each participating country and expert validation. Data were collated by VectorNet members and extensively validated during data entry and mapping processes. Results: As of 2021, the VectorNet archive consisted of ca 475,000 records relating to > 330 species. Maps for 42 species are routinely produced online at subnational administrative unit resolution. On VectorNet maps, there are relatively few areas where surveillance has been recorded but there are no distribution data. Comparison with other continental databases, namely the Global Biodiversity Information Facility and VectorBase show that VectorNet has 5–10 times as many records overall, although three species are better represented in the other databases. In addition, VectorNet maps show where species are absent. VectorNet's impact as assessed by citations (ca 60 per year) and web statistics (58,000 views) is substantial and its maps are widely used as reference material by professionals and the public. Conclusion: VectorNet maps are the pre-eminent source of rigorously validated arthropod vector maps for Europe and its surrounding areas.
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- 2023
9. Impact of regional climate change on the mosquito vector Aedes albopictus in a tropical island environment: La Réunion
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Lamy, K., Tran, Annelise, Portafaix, T., Leroux, M.D., Baldet, Thierry, Lamy, K., Tran, Annelise, Portafaix, T., Leroux, M.D., and Baldet, Thierry
- Abstract
The recent expansion of Aedes albopictus across continents in both tropical and temperate regions and the exponential growth of dengue cases over the past 50 years represent a significant risk to human health. Although climate change is not the only factor responsible for the increase and spread of dengue cases worldwide, it might increase the risk of disease transmission at global and regional scale. Here we show that regional and local variations in climate can induce differential impacts on the abundance of Ae. albopictus. We use the instructive example of Réunion Island with its varied climatic and environmental conditions and benefiting from the availability of meteorological, climatic, entomological and epidemiological data. Temperature and precipitation data based on regional climate model simulations (3 km × 3 km) are used as inputs to a mosquito population model for three different climate emission scenarios. Our objective is to study the impact of climate change on the life cycle dynamics of Ae. albopictus in the 2070–2100 time horizon. Our results show the joint influence of temperature and precipitation on Ae. albopictus abundance as a function of elevation and geographical subregion. At low-elevations areas, decreasing precipitation is expected to have a negative impact on environmental carrying capacity and, consequently, on Ae. albopictus abundance. At mid- and high-elevations, decreasing precipitation is expected to be counterbalanced by a significant warming, leading to faster development rates at all life stages, and consequently increasing the abundance of this important dengue vector in 2070–2100.
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- 2023
10. Native and invasive seedling drought-resistance under elevated temperature in common gorse populations
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Christina, Mathias, Gire, Céline, Bakker, Mark, Leckie, Alan, Xue, Jianming, Clinton, Peter W., Negrin-Perez, Zaira, Arevalo Sierra, Jose Ramon, Domec, Jean-Christophe, Gonzalez, Maya, Christina, Mathias, Gire, Céline, Bakker, Mark, Leckie, Alan, Xue, Jianming, Clinton, Peter W., Negrin-Perez, Zaira, Arevalo Sierra, Jose Ramon, Domec, Jean-Christophe, and Gonzalez, Maya
- Abstract
The assumption that climatic growing requirements of invasive species are conserved between their native and non-native environment is a key ecological issue in the evaluation of invasion risk. We conducted a growth chamber experiment to compare the effect of water regime and temperature on the growth and mortality of native and invasive populations of common gorse seedlings (Ulex europaeus L.). Seeds were sampled from 20 populations of five areas from both native (continental France and Spain) and non-native areas (New Zealand, Canary and Reunion islands). The seedlings were grown over 36 days in two temperature treatments (ambient and elevated) combined with two water treatments (irrigated or droughted). The elevated temperature (ET) was defined as the highest temperature observed at the niche margin in the different countries. While ET increased seedlings growth, the drought treatment increased mortality rate and limited seedlings growth. Under ET and drought, native populations showed a greater mortality rate (53%) than invasive populations (16%). Invasive seedlings also showed higher above- and belowground development than native ones under these constrained climatic conditions. While phenotypic plasticity did not differ between native and invasive populations, the difference between populations in terms of total dry mass could be related to differences in the climate of origin (precipitation in particular). Assessing the importance of phenotypic changes between populations within invasive species is crucial to identify the margins of their climatic distribution range and to highlight areas where management efforts should be concentrated in order to limit its spread.
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- 2023
11. Spatial modelling of malaria prevalence associated with geographical factors in Houet province of Burkina Faso, West Africa
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Millogo, Abdoul Azize, Yaméogo, Lassane, Kassie, Daouda, de Charles Ouédraogo, François, Guissou, Charles, Diabaté, Abdoulaye, Millogo, Abdoul Azize, Yaméogo, Lassane, Kassie, Daouda, de Charles Ouédraogo, François, Guissou, Charles, and Diabaté, Abdoulaye
- Abstract
Malaria is a permanent threat to health in western Burkina Faso. Research has shown that geographical variables contribute to the spatial distribution in its transmission. The objective of this study is to assess the relationship between malaria prevalence and potential explanatory geographical variables in the Houet province in Burkina Faso. Statistics on malaria prevalence registered by health centres in the Houet province in 2017 and potential geographical variables identified through a literature review were collected. An Ordinary Least Squares (OLS) regression was used to identify key geographical variables and to measure their association with malaria while the Getis Ord Gi* index was used to locate malaria hotspots. The results showed that average annual temperature, vegetation density, percentage of clay in the soil, total annual rainfall and distance to the nearest waterbody are the main variables associated with malaria prevalence. These variables account for two-thirds of the spatial variability of malaria prevalence observed in Houet province. The intensity and direction of the relationship between malaria prevalence and geographical factors vary according to the variable. Hence, only vegetation density is positively correlated with malaria prevalence. Average temperature, for soil clay content, annual rainfall and for distance to the nearest water body are negatively correlated with the disease prevalence. These results show that even in an endemic area, malaria prevalence has significant spatial variation. The results could contribute to the choice of intervention sites, as this choice is crucial for reducing the malaria burden.
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- 2023
12. Upland rice varietal mixtures in Madagascar: Evaluating the effects of varietal interaction on crop performance
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Rahajaharilaza, Koloina, Muller, Bertrand, Violle, Cyrille, Vom Brocke, Kirsten, Ramavovololona, Morel, Jean-Benoit, Ballini, Elsa, Fort, Florian, Rahajaharilaza, Koloina, Muller, Bertrand, Violle, Cyrille, Vom Brocke, Kirsten, Ramavovololona, Morel, Jean-Benoit, Ballini, Elsa, and Fort, Florian
- Abstract
Introduction: Rice plays a critical role in human livelihoods and food security. However, its cultivation requires inputs that are not accessible to all farming communities and can have negative effects on ecosystems. simultaneously, ecological research demonstrates that biodiversity management within fields contributes to ecosystem functioning. Methods: This study aims to evaluate the mixture effect of four functionally distinct rice varieties in terms of characteristics and agronomic performance and their spatial arrangement on the upland rice performance in the highlands of Madagascar. The study was conducted during the 2021-2022 rainfall season at two close sites in Madagascar. Both site differ from each other's in soil properties and soil fertility management. The experimental design at each site included three modalities: i) plot composition, i.e., pure stand or binary mixture; ii) the balance between the varieties within a mixture; iii) and for the balanced mixture (50% of each variety), the spatial arrangement, i.e., row or checkerboard patterns. Data were collected on yields (grain and biomass), and resistance to Striga asiatica infestation, Pyricularia oryzea and bacterial leaf blight (BLB) caused by Xanthomonas oryzae-pv from each plot. Results and discussion: Varietal mixtures produced significantly higher grain and biomass yields, and significantly lower incidence of Pyricularia oryzea compared to pure stands. No significant differences were observed for BLB and striga infestation. These effects were influenced by site fertility, the less fertilized site showed stronger mixture effects with greater gains in grain yield (60%) and biomass yield (42%). The most unbalanced repartition (75% and 25% of each variety) showed the greatest mixture effect for grain yield at both sites, with a strong impact of the varietal identity within the plot. The mixture was most effective when EARLY_MUTANT_IAC_165 constituted 75% of the density associated with other varietie
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- 2023
13. Impact of regional climate change on the mosquito vector Aedes albopictus in a tropical island environment: La Réunion
- Author
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K. Lamy, A. Tran, T. Portafaix, M.D. Leroux, and T. Baldet
- Subjects
Changement climatique ,Environmental Engineering ,P40 - Météorologie et climatologie ,Aedes albopictus ,Facteur climatique ,Pollution ,Vecteur de maladie ,Environmental Chemistry ,Dynamique des populations ,Climat tropical ,Waste Management and Disposal ,L72 - Organismes nuisibles des animaux ,Zone tropicale - Abstract
The recent expansion of Aedes albopictus across continents in both tropical and temperate regions and the exponential growth of dengue cases over the past 50 years represent a significant risk to human health. Although climate change is not the only factor responsible for the increase and spread of dengue cases worldwide, it might increase the risk of disease transmission at global and regional scale. Here we show that regional and local variations in climate can induce differential impacts on the abundance of Ae. albopictus. We use the instructive example of Réunion Island with its varied climatic and environmental conditions and benefiting from the availability of meteorological, climatic, entomological and epidemiological data. Temperature and precipitation data based on regional climate model simulations (3 km × 3 km) are used as inputs to a mosquito population model for three different climate emission scenarios. Our objective is to study the impact of climate change on the life cycle dynamics of Ae. albopictus in the 2070–2100 time horizon. Our results show the joint influence of temperature and precipitation on Ae. albopictus abundance as a function of elevation and geographical subregion. At low-elevations areas, decreasing precipitation is expected to have a negative impact on environmental carrying capacity and, consequently, on Ae. albopictus abundance. At mid- and high-elevations, decreasing precipitation is expected to be counterbalanced by a significant warming, leading to faster development rates at all life stages, and consequently increasing the abundance of this important dengue vector in 2070–2100.
- Published
- 2023
14. Spatial modelling of malaria prevalence associated with geographical factors in Houet province of Burkina Faso, West Africa
- Author
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Millogo, Abdoul Azize, Yaméogo, Lassane, Kassie, Daouda, de Charles Ouédraogo, François, Guissou, Charles, Diabaté, Abdoulaye, Millogo, Abdoul Azize, Yaméogo, Lassane, Kassie, Daouda, de Charles Ouédraogo, François, Guissou, Charles, and Diabaté, Abdoulaye
- Abstract
Malaria is a permanent threat to health in western Burkina Faso. Research has shown that geographical variables contribute to the spatial distribution in its transmission. The objective of this study is to assess the relationship between malaria prevalence and potential explanatory geographical variables in the Houet province in Burkina Faso. Statistics on malaria prevalence registered by health centres in the Houet province in 2017 and potential geographical variables identified through a literature review were collected. An Ordinary Least Squares (OLS) regression was used to identify key geographical variables and to measure their association with malaria while the Getis Ord Gi* index was used to locate malaria hotspots. The results showed that average annual temperature, vegetation density, percentage of clay in the soil, total annual rainfall and distance to the nearest waterbody are the main variables associated with malaria prevalence. These variables account for two-thirds of the spatial variability of malaria prevalence observed in Houet province. The intensity and direction of the relationship between malaria prevalence and geographical factors vary according to the variable. Hence, only vegetation density is positively correlated with malaria prevalence. Average temperature, for soil clay content, annual rainfall and for distance to the nearest water body are negatively correlated with the disease prevalence. These results show that even in an endemic area, malaria prevalence has significant spatial variation. The results could contribute to the choice of intervention sites, as this choice is crucial for reducing the malaria burden.
- Published
- 2022
15. Influences of climate variability on cocoa health and productivity in agroforestry systems in Ghana
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Asitoakor, Bismark Kwesi, Asare, Richard, Ræbild, Anders, Ravn, Hans Peter, Eziah, Vincent Yao, Owusu, Kwadwo, Opoku Mensah, Eric, Vaast, Philippe, Asitoakor, Bismark Kwesi, Asare, Richard, Ræbild, Anders, Ravn, Hans Peter, Eziah, Vincent Yao, Owusu, Kwadwo, Opoku Mensah, Eric, and Vaast, Philippe
- Abstract
The susceptibility of cocoa to harsh climatic conditions is evident in cocoa growing areas in Ghana, and climate distribution models show reduced cocoa suitability to climate change. We assessed how cocoa health and productivity were affected by varying climate conditions for 4 years in 23 cocoa farms along a gradient of low rainfall/high temperature in the north to high rainfall/low temperature in the south of Ghana's cocoa belts. Twenty cocoa trees per farm (in total 460) were observed and scored for their canopy condition, flower intensity, and damaged pods due to mirids, cocoa shield bugs, and black pod disease (BPD). Harvested pods and extracted dried cocoa beans were evaluated to ascertain yield/productivity. Insect pest damages to pods were on average 2.3 ± 0.8, 2.2 ± 1.0, and 3.0 ± 0.7 pods tree−1 year−1 in the south, middle and north, respectively. The healthiest and highest yielding trees were in the rainy south at 0.99 ± 0.02 kg dry beans tree−1 followed by the middle (0.84 ± 0.02 kg) and the north (0.60 ± 0.01 kg). BPD infection was highest in the south at 1.1 ± 1.1 pods tree−1 year−1, followed by the middle (0.7 ± 0.8), and the north (0.4 ± 0.6). Within sites variability in rainfall and temperature was not found to affect yields significantly. The variability in cocoa performance and occurrence of pests and diseases observed within sites may thus be caused by farm management practices that are key to the enhancement of productivity at site level. We recommend regular pruning of cocoa and shade trees to increase aeration and prevent BPD in high rainfall areas, and an increase in shade tree components in dry regions for insect pest management in cocoa systems.
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- 2022
16. Joint effects of climate, tree size, and year on annual tree growth derived from tree-ring records of ten globally distributed forests
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Anderson‐Teixeira, Kristina, Herrmann, Valentine, Rollinson, Christine R., Gonzalez, Bianca, Gonzalez‐Akre, Erika B., Pederson, Neil, Alexander, M. Ross, Allen, Craig D., Alfaro‐Sánchez, Raquel, Awada, Tala, Baltzer, Jennifer L., Baker, Patrick J., Birch, Joseph D., Bunyavejchewin, Sarayudh, Cherubini, Paolo, Davies, Stuart J., Dow, Cameron, Helcoski, Ryan, Kašpar, Jakub, Lutz, James A., Margolis, Ellis Q., Maxwell, Jusitn, McMahon, Sean M., Piponiot, Camille, Russo, Sabrina E., Samonil, Pavel, Sniderhan, Anastasia E., Tepley, Alan J., Vasicková, Ivana, Vlam, Mart, Zuidema, Pieter A., Anderson‐Teixeira, Kristina, Herrmann, Valentine, Rollinson, Christine R., Gonzalez, Bianca, Gonzalez‐Akre, Erika B., Pederson, Neil, Alexander, M. Ross, Allen, Craig D., Alfaro‐Sánchez, Raquel, Awada, Tala, Baltzer, Jennifer L., Baker, Patrick J., Birch, Joseph D., Bunyavejchewin, Sarayudh, Cherubini, Paolo, Davies, Stuart J., Dow, Cameron, Helcoski, Ryan, Kašpar, Jakub, Lutz, James A., Margolis, Ellis Q., Maxwell, Jusitn, McMahon, Sean M., Piponiot, Camille, Russo, Sabrina E., Samonil, Pavel, Sniderhan, Anastasia E., Tepley, Alan J., Vasicková, Ivana, Vlam, Mart, and Zuidema, Pieter A.
- Abstract
Tree rings provide an invaluable long-term record for understanding how climate and other drivers shape tree growth and forest productivity. However, conventional tree-ring analysis methods were not designed to simultaneously test effects of climate, tree size, and other drivers on individual growth. This has limited the potential to test ecologically relevant hypotheses on tree growth sensitivity to environmental drivers and their interactions with tree size. Here, we develop and apply a new method to simultaneously model nonlinear effects of primary climate drivers, reconstructed tree diameter at breast height (DBH), and calendar year in generalized least squares models that account for the temporal autocorrelation inherent to each individual tree's growth. We analyze data from 3811 trees representing 40 species at 10 globally distributed sites, showing that precipitation, temperature, DBH, and calendar year have additively, and often interactively, influenced annual growth over the past 120 years. Growth responses were predominantly positive to precipitation (usually over ≥3-month seasonal windows) and negative to temperature (usually maximum temperature, over ≤3-month seasonal windows), with concave-down responses in 63% of relationships. Climate sensitivity commonly varied with DBH (45% of cases tested), with larger trees usually more sensitive. Trends in ring width at small DBH were linked to the light environment under which trees established, but basal area or biomass increments consistently reached maxima at intermediate DBH. Accounting for climate and DBH, growth rate declined over time for 92% of species in secondary or disturbed stands, whereas growth trends were mixed in older forests. These trends were largely attributable to stand dynamics as cohorts and stands age, which remain challenging to disentangle from global change drivers. By providing a parsimonious approach for characterizing multiple interacting drivers of tree growth, our method reveals
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- 2022
17. Influence of weather and endogenous cycles on spatiotemporal yield variation in oil palm
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Monzon, Juan P., Jabloun, Mohamed, Cock, James, Caliman, Jean-Pierre, Couedel, Antoine, Donough, Christopher, Ho Vun Vui, Philippe, Lim, Ya Li, Mathews, Joshua, Oberthür, Thomas, Prabowo, Noto E., Rattalino Edreira, Juan Ignacio, Sidhu, Manjit, Slingerland, Maja, Sugianto, Hendra, Grassini, Patricio, Monzon, Juan P., Jabloun, Mohamed, Cock, James, Caliman, Jean-Pierre, Couedel, Antoine, Donough, Christopher, Ho Vun Vui, Philippe, Lim, Ya Li, Mathews, Joshua, Oberthür, Thomas, Prabowo, Noto E., Rattalino Edreira, Juan Ignacio, Sidhu, Manjit, Slingerland, Maja, Sugianto, Hendra, and Grassini, Patricio
- Abstract
Oil palm is the major source of vegetable oil in the world and Indonesia is the main palm oil producing country. There is limited knowledge on the factors accounting for spatial and temporal variation in fresh fruit bunches (FFB) yield. Here we investigated relationships between weather and endogenous factors with FFB yield and its components (bunch number and individual bunch weight) using data collected from well-managed plantations in Indonesia. The database included many sites and years (total of 136 block-years observations), portraying a wide range of FFB yield and environmental conditions. We used average annual values to detect spatial variations in yield associated with weather, and monthly values to detect temporal yield variations in yield associated with weather and endogenous cycles. We found that water stress was the key factor accounting for the spatial and/or temporal variation in FFB yield. Our analysis also highlights the importance of vapor pressure deficit (VPD) as a stress factor in oil palm, with this study being the first to demonstrate the negative relationship between yield and VPD and yield and water-use efficiency at the block level. Meteorological anomalies during the bunch failure, anthesis, and sex differentiation periods had the largest impact on yield. Besides climate factors, we confirmed the existence of endogenous yield cycles, with high-yield cycles typically followed by low-yield cycles and vice versa. Our findings extend current knowledge about sources of variation in oil palm yield, providing useful information to describe oil palm production environments and improve oil palm modeling and yield forecasting.
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- 2022
18. The interacting effect of habitat amount, habitat diversity and fragmentation on insect diversity along elevational gradients
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Joëlle Sadeyen, Enric Frago, Marie-Ludders Moutoussamy, Lala Harivelo Ravaomanarivo, Niry Tiana Dianzinga, Peuplements végétaux et bioagresseurs en milieu tropical (UMR PVBMT), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Université de La Réunion (UR)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Département Systèmes Biologiques (Cirad-BIOS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Université d'Antananarivo, Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Centre de Cooperation Internationale en Recherche Agronomique pour le Developpement : European 490 Union (EAFRD program), European 490 Union (ERDF program), Regional Council of Reunion, Departmental Council of the Region Reunion, French National Research Agency (ANR), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
- Subjects
0106 biological sciences ,environmental gradient ,[SDV]Life Sciences [q-bio] ,Beta diversity ,Facteur climatique ,01 natural sciences ,elevational gradient ,Abiotic component ,0303 health sciences ,Ecology ,seasonality ,Altitude ,Facteur du milieu ,respiratory system ,Habitat ,Échantillonnage ,beta diversity ,L20 - Écologie animale ,Biodiversité ,Land cover ,Biology ,010603 evolutionary biology ,thrips ,03 medical and health sciences ,multi-scale analysis ,medicine ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,Environmental gradient ,fragmentation de l'habitat ,Méthode statistique ,Thysanoptera ,fungi ,alpha diversity ,15. Life on land ,Seasonality ,medicine.disease ,barcoding ,Taxon ,13. Climate action ,insect ,Alpha diversity ,human activities - Abstract
Aim: Elevational gradients are a useful approach to evaluate how environmental factors affect animal diversity. Decades of studies on the elevation-diversity gradient have revealed that this gradient varies greatly with taxa and geographic regions. One potential explanation for this may be the dependence of the relationship on landscape features. We explore the impact of fragmentation, habitat diversity and habitat amount on insect diversity (alpha and beta) and abundance along elevational gradients. We hypothesize that insect diversity and abundance will relate negatively with elevation, but positively with these landscape features. We also hypothesize that landscape features will interact in a way that the positive effect of a given variable on insect diversity may be offset by the others. Location: Reunion Island (Indian Ocean). Taxon: The insect order thrips (Thysanoptera). Methods: Insects were sampled along replicated elevational gradients, and at each sampling plot landscape features and abiotic variables were estimated within buffers surrounding the site. Insect alpha diversity was estimated using abundance-based rarefaction methods, whereas beta diversity was estimated calculating the "Local contributions to beta diversity" metric. The effect of elevation, rainfall, landscape features and their interactions was assessed on insect alpha and beta diversity and abundance during two consecutive seasons using linear mixed effects models. Results: We found that thrips alpha and beta diversity was negatively related with elevation, but the relationship varied between seasons and rainfall regimes. Among the different landscape features considered, we found that habitat amount had the strongest effect on diversity. The effect of habitat amount on diversity, however, was offset in areas of low habitat (or land cover) diversity. Main conclusions: Generalizing the factors that underlie the elevation diversity gradient has become a cornerstone in ecological theory because it can help to understand the impact of human activities on diversity. Here we show that taking landscape information into account may help to fulfil this objective because landscape effects co-vary with elevation with often intricate consequences for diversity.
- Published
- 2020
19. Spatial modelling of malaria prevalence associated with geographical factors in Houet province of Burkina Faso, West Africa
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Abdoul Azize Millogo, Lassane Yaméogo, Daouda Kassié, François de Charles Ouédraogo, Charles Guissou, and Abdoulaye Diabaté
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Précipitation ,Méthode statistique ,Geography, Planning and Development ,Morbidité ,Facteur climatique ,Température ,Malaria ,S50 - Santé humaine ,Collecte de données ,Analyse de régression - Abstract
Malaria is a permanent threat to health in western Burkina Faso. Research has shown that geographical variables contribute to the spatial distribution in its transmission. The objective of this study is to assess the relationship between malaria prevalence and potential explanatory geographical variables in the Houet province in Burkina Faso. Statistics on malaria prevalence registered by health centres in the Houet province in 2017 and potential geographical variables identified through a literature review were collected. An Ordinary Least Squares (OLS) regression was used to identify key geographical variables and to measure their association with malaria while the Getis Ord Gi* index was used to locate malaria hotspots. The results showed that average annual temperature, vegetation density, percentage of clay in the soil, total annual rainfall and distance to the nearest waterbody are the main variables associated with malaria prevalence. These variables account for two-thirds of the spatial variability of malaria prevalence observed in Houet province. The intensity and direction of the relationship between malaria prevalence and geographical factors vary according to the variable. Hence, only vegetation density is positively correlated with malaria prevalence. Average temperature, for soil clay content, annual rainfall and for distance to the nearest water body are negatively correlated with the disease prevalence. These results show that even in an endemic area, malaria prevalence has significant spatial variation. The results could contribute to the choice of intervention sites, as this choice is crucial for reducing the malaria burden.
- Published
- 2022
20. Influence des variations climatiques sur la croissance et la qualité du bois de deux essences des zones semi-arides tchadiennes : Faidherbia albida (Del.) A. Chev. et Balanites aegyptiaca (L.) Delile
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Dougabka, Dao
- Subjects
P40 - Météorologie et climatologie ,Conditions météorologiques ,Facteur climatique ,K10 - Production forestière ,Faidherbia albida ,Propriété mécanique ,Accroissement du diamètre ,Balanites aegyptiaca ,Zone semi-aride ,Propriété du bois ,Propriété physicochimique - Abstract
Faidherbia albida et Balanites aegyptiaca sont deux espèces caractéristiques et emblématiques de la zone semi-aride tchadienne. Elles revêtent une grande importance socio-économique dans toutes leurs zones naturelles de répartition du fait de leurs multiples usages. La présente étude de nature exploratoire a consisté à comprendre le déterminisme des variations des caractéristiques du bois des deux espèces en relation avec leurs variations de conditions de croissance. Sa finalité est de mieux connaitre l'hétérogénéité de comportement technologique des bois de ces deux espèces afin de mieux les valoriser dans les processus de reboisement et d'élargir leur domaine d'utilisation locale. L'étude a été réalisée selon deux approches. La première a consisté à déterminer par des méthodes conventionnelles et normalisées une sélection de caractéristiques physiques, mécaniques et chimiques des bois prélevés dans deux zones climatiques tchadiennes (zone sahélienne et zone soudanienne) et une zone climatique sénégalaise (zone sahélienne), et à étudier leurs variations en fonction des conditions de croissance liées essentiellement aux différences climatiques. La seconde a consisté à étudier les variations radiales de caractéristiques physiques, mécaniques, et de la composition isotopique de carbone 13 (δ13C), ceci en fonction de la croissance des arbres, par des mesures réalisées sur des micro-échantillons prélevés au niveau des cernes. Les résultats du premier volet de l'étude ont mis en évidence pour les deux espèces des tendances variables pour toutes les caractéristiques étudiées. Pour Faidherbia albida, l'infradensité, la masse volumique, les retraits de séchage et les trois caractéristiques mécaniques étudiées sont significativement plus élevés dans la zone sahélienne sénégalaise que dans les deux provenances tchadiennes. Cette même tendance est observée pour les taux d'extractibles et de lignine, mais les taux de cellulose et d'hémicellulose sont significativement plus élevés dans la zone sahélienne tchadienne. Pour Balanites aegyptiaca, les tendances sont variables suivant les propriétés, avec un effet inverse des provenances pour le retrait tangentiel et le retrait radial, et aucune tendance marquée pour le retrait volumique. Le point de saturation des fibres est faible pour les trois provenances (inférieur à 25 %). En zone soudanienne tchadienne, la masse volumique est significativement plus élevée que dans les deux autres zones, alors que la contrainte de rupture en compression et le module d'élasticité longitudinal sont moins élevés. Les taux de lignine et d'hémicellulose sont plus élevés en zone sahélienne tchadienne. Une analyse des extractibles par GC-MS a mis en évidence des différences marquées entre les deux espèces d'une part et les trois provenances d'autre part. Ces différences pourraient être mises en relation avec celles observées entre provenances et espèces pour certaines propriétés physiques et mécaniques du bois telles que les retraits de séchage, le PSF, la masse volumique et le module d'élasticité. L'effet de chaque extractible sur ces propriétés resterait cependant à établir, en tenant compte des probables impacts conjugués de ces différents composés. Le second volet de l'étude a montré que l'accroissement moyen était légèrement supérieur en zone soudanienne qu'en zone sahélienne ce qui reflète les différences de conditions climatiques qui impactent la croissance des arbres. Pour Faidherbia albida, l'absence de différence significative de δ13C entre les deux provenances peut s'expliquer par le fait que cette espèce est une phréatophyte. Pour Balanites aegyptiaca, le δ13C moyen dans la zone sahélienne est significativement inférieur à celui de la zone soudanienne, tendance inverse à celle à laquelle on pouvait s'attendre. Ce résultat tend à montrer que cette espèce présente une bonne efficacité et une bonne stratégie opportuniste d'utilisation de l'eau. L'étude des relations entre les variables prises deux à deux a donné des résultats contrastés. L'absence de relation entre la largeur de cerne et la pluviométrie peut être liée à plusieurs causes : pluviométrie sur les sites de prélèvement des bois différente de celle de la station météorologique éloignée de ces sites, comportement phréatophile avéré de Faidherbia albida et possible pour Balanites aegyptiaca, et délimitation incertaine des cernes liée à leur structure. Les perspectives de recherche à venir sur les deux espèces sont multiples, et concernent aussi bien le protocole d'échantillonnage (utilisation de branches au lieu de troncs), l'étude des rythmes de croissance afin de comprendre le phénomène de disparition/fusion partielle des cernes, que l'élargissement de l'étude à d'autres provenances.
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- 2022
21. Understanding the complexity of disease-climate interactions for rice bacterial panicle blight under tropical conditions
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Echeverri-Rico, Johanna, Petro, Eliel, Fory, Paola A., Mosquera, Gloria, Lang, Jillian M., Leach, Jan E., Lobaton, Juan D., Garcés, Gabriel, Perafán, Ricardo, Amezquita, Nelson, Toro, Shirley, Mora, Brayan, Cuasquer, Juan, Ramirez-Villegas, Julian, Rebolledo, Maria Camila, Torres, Edgar A., Echeverri-Rico, Johanna, Petro, Eliel, Fory, Paola A., Mosquera, Gloria, Lang, Jillian M., Leach, Jan E., Lobaton, Juan D., Garcés, Gabriel, Perafán, Ricardo, Amezquita, Nelson, Toro, Shirley, Mora, Brayan, Cuasquer, Juan, Ramirez-Villegas, Julian, Rebolledo, Maria Camila, and Torres, Edgar A.
- Abstract
Bacterial panicle blight (BPB) caused by Burkholderia glumae is one of the main concerns for rice production in the Americas since bacterial infection can interfere with the grain-filling process and under severe conditions can result in high sterility. B. glumae has been detected in several rice-growing areas of Colombia and other countries of Central and Andean regions in Latin America, although evidence of its involvement in decreasing yield under these conditions is lacking. Analysis of different parameters in trials established in three rice-growing areas showed that, despite BPB presence, severity did not explain the sterility observed in fields. PCR tests for B. glumae confirmed low infection in all sites and genotypes, only 21.4% of the analyzed samples were positive for B. glumae. Climate parameters showed that Monteria and Saldaña registered maximum temperature above 34˚C, minimum temperature above 23˚C, and Relative Humidity above 80%, conditions that favor the invasion model described for this pathogen in Asia. Our study found that in Colombia, minimum temperature above 23˚C during 10 days after flowering is the condition that correlates with disease incidence. Therefore, this correlation, and the fact that Monteria and Saldaña had a higher level of infected samples according to PCR tests, high minimum temperature, but not maximum temperature, seems to be determinant for B. glumae colonization under studied field conditions. This knowledge is a solid base line to design strategies for disease control, and is also a key element for breeders to develop strategies aimed to decrease the effect of B. glumae and high night-temperature on rice yield under tropical conditions.
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- 2021
22. Post-harvest physiological deterioration in several cassava genotypes over sequential harvests and effect of pruning prior to harvest
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Luna, Jorge, Dufour, Dominique, Tran, Thierry, Pizarro, Monica, Calle, Fernando, Garcia Domínguez, Moralba, Hurtado, Iván M., Sanchez, Teresa, Ceballos, Hernan, Luna, Jorge, Dufour, Dominique, Tran, Thierry, Pizarro, Monica, Calle, Fernando, Garcia Domínguez, Moralba, Hurtado, Iván M., Sanchez, Teresa, and Ceballos, Hernan
- Abstract
Consumers, traders and processors consider post‐harvest physiological deterioration (PPD) an important constraint. In Experiment 1, PPD was assessed three consecutive years in roots from five genotypes through seven storage days. PPD, scopoletin and dry matter content (DMC) was recorded during storage. Year, genotype, duration of storage and their interactions were significant. PPD was associated with duration of storage period, DMC and scopoletin contents. Ambient moisture and temperature during storage influenced PPD. In Experiment 2, roots from seven clones were harvested 10 months after planting from 30 consecutive biweekly plantings. PPD was assessed 0, 2 and 7 days after harvest. In 13 harvests, roots from plants pruned six days earlier were also evaluated. Results indicated large seasonal variation across genotypes. Pruning reduced PPD and DMC. Complex and contrasting relationships among the variables analysed were found. There is no uniform model explaining the relationship between PPD and the independent variables considered.
- Published
- 2021
23. Adaptability and interspecific variability in growth and leaf traits of eucalypt
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Makouanzi Ekomono, Chrissy Garel, Loubassou, Castela Bath Shéba Vitel, Mbama, Mavie Parfait, Loubota Panzou, Grace Jopaul, Vigneron, Philippe, Makouanzi Ekomono, Chrissy Garel, Loubassou, Castela Bath Shéba Vitel, Mbama, Mavie Parfait, Loubota Panzou, Grace Jopaul, and Vigneron, Philippe
- Abstract
Effective adaptability of plants to new environments can be analysed in terms of survival rate. Analysing the traits that favour adaptation to environmental changes provides a more in-depth understanding of the mechanisms involved. Local adaptation occurs because different environmental factors exert selective pressure across habitats. Understanding the leaf mechanisms underlying plant survival and growth is crucial to determine why local adaptation involves trade-offs. A comparative provenance test on 29 eucalyptus species was conducted to improve our understanding of species adaptation strategies on coastal plains of Pointe-Noire, Republic of the Congo. We studied the different functional traits to determine how plants function and to highlight the different species' adaptive strategies. For each species, survival, growth traits and leaf traits were measured, and the climatic factors of the origin area for each species was taken into account. Cluster analysis was performed on groups of species with a similar growth strategy. The results revealed general trends that explain the physiological mechanisms involved in the species' local adaptation. Indeed, species have survived to current environmental changes by adjusting their specific leaf area plasticity. The 32 provenances of eucalyptus were subdivided into four groups by cluster analysis. The first cluster included two species (E. pilularis and E. peltata) that are totally unsuited to the local conditions in Pointe-Noire, with the slowest growth rate and smallest specific leaf area. The second cluster contained species that showed a wide variety of growing strategies, allowing them to adapt to local conditions. The third cluster included a species that is specialised in obtaining large quantities of resources, while investing very little in growth. The fourth cluster included species that acquired and used resources at a slow rate. Leaf anatomy was quite responsive to climatic conditions. We evaluated the differe
- Published
- 2021
24. Using UAV borne, multi-spectral imaging for the field phenotyping of shoot biomass, leaf area index and height of west african sorghum varieties under two contrasted water conditions
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Gano, Baboucar, Dembele, Joseph Sekou B, Ndour, Adama, Luquet, Delphine, Beurier, Grégory, Diouf, Diaga, Audebert, Alain, Gano, Baboucar, Dembele, Joseph Sekou B, Ndour, Adama, Luquet, Delphine, Beurier, Grégory, Diouf, Diaga, and Audebert, Alain
- Abstract
Meeting food demand for the growing population will require an increase to crop production despite climate changes and, more particularly, severe drought episodes. Sorghum is one of the cereals most adapted to drought that feed millions of people around the world. Valorizing its genetic diversity for crop improvement can benefit from extensive phenotyping. The current methods to evaluate plant biomass, leaves area and plants height involve destructive sampling and are not practical in breeding. Phenotyping relying on drone based imagery is a powerful approach in this context. The objective of this study was to develop and validate a high throughput field phenotyping method of sorghum growth traits under contrasted water conditions relying on drone based imagery. Experiments were conducted in Bambey (Senegal) in 2018 and 2019, to test the ability of multi-spectral sensing technologies on-board a UAV platform to calculate various vegetation indices to estimate plants characteristics. In total, ten (10) contrasted varieties of West African sorghum collection were selected and arranged in a randomized complete block design with three (3) replicates and two (2) water treatments (well-watered and drought stress). This study focused on plant biomass, leaf area index (LAI) and the plant height that were measured weekly from emergence to maturity. Drone flights were performed just before each destructive sampling and images were taken by multi-spectral and visible cameras. UAV-derived vegetation indices exhibited their capacity of estimating LAI and biomass in the 2018 calibration data set, in particular: normalized difference vegetative index (NDVI), corrected transformed vegetation index (CTVI), seconded modified soil-adjusted vegetation index (MSAVI2), green normalize difference vegetation index (GNDVI), and simple ratio (SR) (r2 of 0.8 and 0.6 for LAI and biomass, respectively). Developed models were validated with 2019 data, showing a good performance (r2 of 0.92 and 0.
- Published
- 2021
25. African plum (Dacryodes edulis [G. Don] H.J. Lam) fruit development indexes clearly defined and phenophases correlated with temperature in the tropics
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Nsangou, Salamatou Mpemboura, Tonfack, Libert Brice, Mbéguié-A-Mbéguié, Didier, Temegne Nono, Carine, Ntsomboh-Ntsefong, Godswill, Youmbi, Emmanuel, Nsangou, Salamatou Mpemboura, Tonfack, Libert Brice, Mbéguié-A-Mbéguié, Didier, Temegne Nono, Carine, Ntsomboh-Ntsefong, Godswill, and Youmbi, Emmanuel
- Abstract
Dacryodes edulis (G. Don) H.J. Lam is an underexploited oil-bearing fruit tree highly appreciated in the Central Africa rainforest. To improve horticultural management and provide relevant data to scientists for physiological studies, the reproductive phenology of D. edulis as well as their fruit (safou) development and ripening indexes has been defined and correlated to climatic conditions. Changes in safou were assessed in four production localities in Cameroon. Fruit-set-to-ripening time was evaluated over 2 consecutive production years. Four fruits developmental and ripening stages and their durations were determined as follows: The putative cell division (1–2 weeks); putative elongation (10–14 weeks); pre-ripening (2–7 weeks); and ripening phases (3–5 weeks). Rainfall, average, and cumulative temperatures were found to be correlated with the chronology of reproductive phenophases. The average temperature during the period ranging from the floral bud emergence to the fruit set can be used to predict the thermal time. Similarly, the average ambient temperature during the period from floral bud emergence to anthesis can help to determine the temperature to be cumulated during the ripening phase. These findings are considerable contributions that could help producers to enhance the industrial management of safou sector, reduce fruit perishability, and better control their harvesting time.
- Published
- 2021
26. An operational framework for mapping irrigated areas at plot scale using Sentinel-1 and Sentinel-2 data
- Author
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Hatem Belhouchette, Mehrez Zribi, Ibrahim Fayad, Valérie Demarez, Hassan Bazzi, Nicolas Baghdadi, Ghaith Amin, Territoires, Environnement, Télédétection et Information Spatiale (UMR TETIS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-AgroParisTech-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Centre d'études spatiales de la biosphère (CESBIO), Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut national des sciences de l'Univers (INSU - CNRS)-Observatoire Midi-Pyrénées (OMP), Météo France-Centre National d'Études Spatiales [Toulouse] (CNES)-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Météo France-Centre National d'Études Spatiales [Toulouse] (CNES)-Centre National de la Recherche Scientifique (CNRS), Centre International de Hautes Etudes Agronomiques Méditerranéennes - Institut Agronomique Méditerranéen de Montpellier (CIHEAM-IAMM), Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM), Agrosystèmes Biodiversifiés (UMR ABSys), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Centre International de Hautes Etudes Agronomiques Méditerranéennes - Institut Agronomique Méditerranéen de Montpellier (CIHEAM-IAMM), Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM)-Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Fonctionnement et conduite des systèmes de culture tropicaux et méditerranéens (UMR SYSTEM), This research received funding from the French Space Study Center (CNES, TOSCA 2021 project), the National Research Institute for Agriculture, Food and the Environment (INRAE), the Occitanie Region of France and the Mediterranean Agronomic Institute of Montpellier (CIHEAM-IAMM)., Institut de Recherche pour le Développement (IRD)-Université Toulouse III - Paul Sabatier (UT3), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut national des sciences de l'Univers (INSU - CNRS)-Observatoire Midi-Pyrénées (OMP), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National d'Études Spatiales [Toulouse] (CNES)-Centre National de la Recherche Scientifique (CNRS)-Météo-France -Institut national des sciences de l'Univers (INSU - CNRS)-Centre National d'Études Spatiales [Toulouse] (CNES)-Centre National de la Recherche Scientifique (CNRS)-Météo-France -Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre International de Hautes Etudes Agronomiques Méditerranéennes - Institut Agronomique Méditerranéen de Montpellier (CIHEAM-IAMM), Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM)-Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), and Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM)-Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier
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IMAGING TECHNIQUES ,Synthetic aperture radar ,Irrigation ,INDEX DE VEGETATION ,010504 meteorology & atmospheric sciences ,VEGETATION INDEX ,TENEUR EN EAU ,Science ,irrigation ,synthetic aperture radar ,normalized difference vegetation index ,soil moisture ,summer crops ,0211 other engineering and technologies ,FRANCE ,Terrain ,METHODE ,02 engineering and technology ,CLIMATIC FACTORS ,01 natural sciences ,Normalized Difference Vegetation Index ,law.invention ,CENTRE NORD ,law ,Statistics ,CULTURE IRRIGUEE ,Radar ,CARTOGRAPHIE ,021101 geological & geomatics engineering ,0105 earth and related environmental sciences ,Mathematics ,HUMIDITE ,[SDV.SA.AEP]Life Sciences [q-bio]/Agricultural sciences/Agriculture, economy and politics ,CENTRE NORTH ,CARTOGRAPHY ,15. Life on land ,Random forest ,FACTEUR CLIMATIQUE ,Metric (mathematics) ,[SDE]Environmental Sciences ,TECHNIQUE D'IMAGERIE ,METHODS ,General Earth and Planetary Sciences ,Scale (map) ,MOISTURE CONTENT ,HUMIDITY ,IRRIGATED FARMING - Abstract
International audience; In this study, we present an operational methodology for mapping irrigated areas at plot scale, which overcomes the limitation of terrain data availability, using Sentinel-1 (S1) C-band SAR (synthetic-aperture radar) and Sentinel-2 (S2) optical time series. The method was performed over a study site located near Orléans city of north-central France for four years (2017 until 2020). First, training data of irrigated and non-irrigated plots were selected using predefined selection criteria to obtain sufficient samples of irrigated and non-irrigated plots each year. The training data selection criteria is based on two irrigation metrics; the first one is a SAR-based metric derived from the S1 time series and the second is an optical-based metric derived from the NDVI (normalized difference vegetation index) time series of the S2 data. Using the newly developed irrigation event detection model (IEDM) applied for all S1 time series in VV (Vertical-Vertical) and VH (Vertical-Horizontal) polarizations, an irrigation weight metric was calculated for each plot. Using the NDVI time series, the maximum NDVI value achieved in the crop cycle was considered as a second selection metric. By fixing threshold values for both metrics, a dataset of irrigated and non-irrigated samples was constructed each year. Later, a random forest classifier (RF) was built for each year in order to map the summer agricultural plots into irrigated/non-irrigated. The irrigation classification model uses the S1 and NDVI time series calculated over the selected training plots. Finally, the proposed irrigation classifier was validated using real in situ data collected each year. The results show that, using the proposed classification procedure, the overall accuracy for the irrigation classification reaches 84.3%, 93.0%, 81.8%, and 72.8% for the years 2020, 2019, 2018, and 2017, respectively. The comparison between our proposed classification approach and the RF classifier built directly from in situ data showed that our approach reaches an accuracy nearly similar to that obtained using in situ RF classifiers with a difference in overall accuracy not exceeding 6.2%. The analysis of the obtained classification accuracies of the proposed method with precipitation data revealed that years with higher rainfall amounts during the summer crop-growing season (irrigation period) had lower overall accuracy (72.8% for 2017) whereas years encountering a drier summer had very good accuracy (93.0% for 2019).
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- 2021
27. Understanding the complexity of disease-climate interactions for rice bacterial panicle blight under tropical conditions
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Shirley Toro, Jillian M. Lang, Gabriel Garces, Ricardo Perafán, Johanna Echeverri-Rico, Nelson Amezquita, Eliel Petro, Juan B. Cuasquer, Julian Ramirez-Villegas, Juan David Lobaton, Paola A. Fory, Edgar Torres, Jan E. Leach, Gloria Mosquera, Brayan Mora, Maria Camila Rebolledo, Fedearroz FNA Bogota, International Center for Tropical Agriculture [Colombie] (CIAT), Consultative Group on International Agricultural Research [CGIAR] (CGIAR), Colorado State University [Pueblo] (CSUPueblo), Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Département Systèmes Biologiques (Cirad-BIOS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), RiceTec LTDA, Colombian Ministry of Science 556-2013, Global Rice Science Partnership (GRiSP), CGIAR AIDBFS-G-11-00002-10 MTO 069018, and Climate Change, Agriculture and Food Security (CCAFS) project Agroclimas
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0106 biological sciences ,0301 basic medicine ,Atmospheric Science ,Veterinary medicine ,Epidemiology ,[SDV]Life Sciences [q-bio] ,Artificial Gene Amplification and Extension ,Plant Science ,Disease ,Pathology and Laboratory Medicine ,Facteur climatique ,Polymerase Chain Reaction ,01 natural sciences ,Geographical locations ,Maladie des plantes ,Genotype ,Medicine and Health Sciences ,Colonization ,Température de l'air ,2. Zero hunger ,Multidisciplinary ,Virulence ,biology ,Plant Anatomy ,Eukaryota ,food and beverages ,Plants ,Bacterial Pathogens ,Experimental Organism Systems ,Medical Microbiology ,Medicine ,Seasons ,Pathogens ,Research Article ,Inflorescences ,Burkholderia ,Sterility ,P40 - Météorologie et climatologie ,Science ,Oryza sativa ,Colombia ,Research and Analysis Methods ,Microbiology ,03 medical and health sciences ,Meteorology ,Plant and Algal Models ,Burkholderia glumae ,Blight ,Grasses ,Panicles ,Climat tropical ,Molecular Biology Techniques ,Molecular Biology ,Microbial Pathogens ,Plant Diseases ,Panicle ,H20 - Maladies des plantes ,Tropical Climate ,Infertilité ,Organisms ,Biology and Life Sciences ,Oryza ,Humidity ,South America ,biology.organism_classification ,Maladie bactérienne ,030104 developmental biology ,13. Climate action ,Animal Studies ,Earth Sciences ,Rice ,People and places ,010606 plant biology & botany - Abstract
Bacterial panicle blight (BPB) caused by Burkholderia glumae is one of the main concerns for rice production in the Americas since bacterial infection can interfere with the grain-filling process and under severe conditions can result in high sterility. B. glumae has been detected in several rice-growing areas of Colombia and other countries of Central and Andean regions in Latin America, although evidence of its involvement in decreasing yield under these conditions is lacking. Analysis of different parameters in trials established in three rice-growing areas showed that, despite BPB presence, severity did not explain the sterility observed in fields. PCR tests for B. glumae confirmed low infection in all sites and genotypes, only 21.4% of the analyzed samples were positive for B. glumae. Climate parameters showed that Montería and Saldaña registered maximum temperature above 34°C, minimum temperature above 23°C, and Relative Humidity above 80%, conditions that favor the invasion model described for this pathogen in Asia. Our study found that in Colombia, minimum temperature above 23°C during 10 days after flowering is the condition that correlates with disease incidence. Therefore, this correlation, and the fact that Montería and Saldaña had a higher level of infected samples according to PCR tests, high minimum temperature, but not maximum temperature, seems to be determinant for B. glumae colonization under studied field conditions. This knowledge is a solid base line to design strategies for disease control, and is also a key element for breeders to develop strategies aimed to decrease the effect of B. glumae and high night-temperature on rice yield under tropical conditions.
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- 2021
28. Joint species distributions reveal the combined effects of host plants, abiotic factors and species competition as drivers of species abundances in fruit flies
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Abir Hafsi, Stéphane Robin, Pierre François Duyck, Frédéric Chiroleu, Benoit Facon, Virginie Ravigné, François Massol, Julien Chiquet, Maud Charlery De La Masseliere, Maxime Dubart, Enric Frago, Peuplements végétaux et bioagresseurs en milieu tropical (UMR PVBMT), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Université de La Réunion (UR)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Mathématiques et Informatique Appliquées (MIA Paris-Saclay), AgroParisTech-Université Paris-Saclay-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Centre d’Infection et d’Immunité de Lille - INSERM U 1019 - UMR 9017 - UMR 8204 (CIIL), Institut Pasteur de Lille, Réseau International des Instituts Pasteur (RIIP)-Réseau International des Instituts Pasteur (RIIP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Lille-Centre Hospitalier Régional Universitaire [Lille] (CHRU Lille)-Centre National de la Recherche Scientifique (CNRS), Évolution, Écologie et Paléontologie (Evo-Eco-Paleo) - UMR 8198 (Evo-Eco-Paléo (EEP)), Université de Lille-Centre National de la Recherche Scientifique (CNRS), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Département Systèmes Biologiques (Cirad-BIOS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Institut Agronomique Néo-Calédonien (IAC), Thicenters work used images acquired within the framework of the CNES Kalideos device (Reunion site), which benefited from the 'Programme Investissements d'Avenir' EQUIPEX of the French 'Agence Nationale de la Recherche' on project GEOSUD bearing the reference ANR-10-EQPX-0020. The images also required financial support the French Ministry of Agriculture and field data transmitted by the `Syndicat du Sucre de la Reunion' and the 'SAFER de la Reunion'. BF, FC, FM, JC, MD, SR and VR received the financial support of the French 'Agence Nationale de la Recherche' project NGB (ANR-17-CE32-0011). EF, FC, PFD and VR were funded by the European Union (European Regional Development Fund, ERDF contract GURDT I2016-1731-0006632), the Conseil Regional de La Reunion and the Centre de Cooperation Internationale en Recherche Agronomique pour le Developpement (CIRAD). AH was funded by the 'Ministere de l'Enseignement superieur et de la Recherche Scientifique de la Tunisie'., ANR-10-EQPX-0020,GEOSUD,GEOSUD : Infrastructure nationale d'imagerie satellitaire pour la recherche sur l'environnement et les territoires et ses applications à la gestion et aux politiques publiques(2010), ANR-17-CE32-0011,NGB,Biosurveillance Next-Gen des changements dans la structure et le fonctionnement des écosystèmes(2017), This work is dedicated to Serge Quilici who has been leading prolific research on the tephritids of Reunion his whole career. Cirad technicians Jim Payet and Serge Glenac made this study possible through their invaluable expertise with fly rearing and ecology. We also thank them as well as Antoine Franck, Christophe Simiand and Patrick Turpin for collecting field data over the years. Thomas Brequigny contributed to measuring larval traits during his internship. Thicenters work used images acquired within the framework of the CNES Kalideos device (Reunion site), which benefited from the 'Programme Investissements d'Avenir' EQUIPEX of the French 'Agence Nationale de la Recherche' on project GEOSUD bearing the reference ANR-10-EQPX-0020. The images also required financial support the French Ministry of Agriculture and field data transmitted by the `Syndicat du Sucre de la Reunion' and the 'SAFER de la Reunion'. BF, FC, FM, JC, MD, SR and VR received the financial support of the French 'Agence Nationale de la Recherche' project NGB (ANR-17-CE32-011). EF, FC, PFD and VR were funded by the European Union (European Regional Development Fund, ERDF contract GURDT I2016-1731-0006632), the Conseil Regional de La Reunion and the Centre de Cooperation Internationale en Recherche Agronomique pour le Developpement (CIRAD). AH was funded by the 'Ministere de l'Enseignement superieur et de la Recherche Scientifique de la Tunisie'. This study used the facilities provided by the Plant Protection Platform (3P, IBISA), Saint-Pierre, Reunion, France., Mathématiques et Informatique Appliquées (MIA-Paris), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-AgroParisTech-Université Paris-Saclay, Centre National de la Recherche Scientifique (CNRS)-Centre Hospitalier Régional Universitaire [Lille] (CHRU Lille)-Université de Lille-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut Pasteur de Lille, Réseau International des Instituts Pasteur (RIIP)-Réseau International des Instituts Pasteur (RIIP), Évolution, Écologie et Paléontologie (Evo-Eco-Paleo) - UMR 8198 (Evo-Eco-Paléo), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
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0106 biological sciences ,pecialisation ,[SDV]Life Sciences [q-bio] ,Facteur climatique ,Generalist and specialist species ,01 natural sciences ,specialization ,Abundance (ecology) ,preference ,preferences ,media_common ,U10 - Informatique, mathématiques et statistiques ,Ecology ,Tephritidae ,food and beverages ,Plants ,phytophagous insects ,Sympatric speciation ,Drosophila ,L20 - Écologie animale ,niche modelling ,performance ,Assembly rules ,Plante hôte ,media_common.quotation_subject ,Distribution des populations ,Biology ,010603 evolutionary biology ,Competition (biology) ,Animals ,Ecology, Evolution, Behavior and Systematics ,Ecological niche ,Host (biology) ,010604 marine biology & hydrobiology ,fungi ,facteurs abiotiques ,15. Life on land ,H10 - Ravageurs des plantes ,Environmental niche modelling ,[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate Zoology ,Modélisation ,Compétition interspécifique ,Écologie animale ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,Adaptation ,community ecology - Abstract
This work is dedicated to Serge Quilici who has been leading prolific research on the tephritids of Reunion his whole career. This article has been reviewed and recommended by Peer Community in Ecology, https://doi.org/10.24072/pci.ecology.100080. The peer review history for this article is available at https://publo ns.com /publo n/10.1111/ele.13825.; International audience; The relative importance of ecological factors and species interactions for shaping species distributions is still debated. The realised niches of eight sympatric tephritid fruit flies were inferred from field abundance data using joint species distribution modelling and network inference, on the whole community and separately on three host plant groups. These estimates were then confronted the fundamental niches of seven fly species estimated through laboratory-measured fitnesses on host plants. Species abundances depended on host plants, followed by climatic factors, with a dose of competition between species sharing host plants. The relative importance of these factors mildly changed among the three host plant groups. Despite overlapping fundamental niches, specialists and generalists had almost distinct realised niches, with possible competitive exclusion of generalists by specialists on Cucurbitaceae. They had different assembly rules: Specialists were mainly influenced by their adaptation to host plants, while generalist abundances varied regardless of their fundamental host use.
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- 2021
29. Using UAV Borne, Multi-Spectral Imaging for the Field Phenotyping of Shoot Biomass, Leaf Area Index and Height of West African Sorghum Varieties under Two Contrasted Water Conditions
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Boubacar Gano, Delphine Luquet, Alain Audebert, Joseph Sékou B. Dembele, Grégory Beurier, Adama P. Ndour, Diaga Diouf, Institut Sénégalais de Recherches Agricoles [Dakar] (ISRA), Université Cheikh Anta Diop [Dakar, Sénégal] (UCAD), Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Département Systèmes Biologiques (Cirad-BIOS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Deutscher Akademischer Austausch Dienst (DAAD), and sgt terra gates project - Bill and Melinda Gates foundation
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0106 biological sciences ,Tolérance à la sécheresse ,010504 meteorology & atmospheric sciences ,UAV platform ,Phénotype ,unmanned aerial vehicles [EN] ,drought tolerance ,Facteur climatique ,RGB cameras ,01 natural sciences ,Imagerie multispectrale ,Mathematics ,2. Zero hunger ,Biomass (ecology) ,education.field_of_study ,biology ,Indice de surface foliaire ,food and beverages ,Agriculture ,Vegetation ,vegetation indices ,multi-spectral ,phenotyping ,F60 - Physiologie et biochimie végétale ,Drought tolerance ,Population ,Context (language use) ,Normalized Difference Vegetation Index ,West Africa ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,Leaf area index ,education ,0105 earth and related environmental sciences ,15. Life on land ,Sorghum ,biology.organism_classification ,Agronomy ,sorghum ,U30 - Méthodes de recherche ,Agronomy and Crop Science ,010606 plant biology & botany ,Index de végétation - Abstract
Meeting food demand for the growing population will require an increase to crop production despite climate changes and, more particularly, severe drought episodes. Sorghum is one of the cereals most adapted to drought that feed millions of people around the world. Valorizing its genetic diversity for crop improvement can benefit from extensive phenotyping. The current methods to evaluate plant biomass, leaves area and plants height involve destructive sampling and are not practical in breeding. Phenotyping relying on drone based imagery is a powerful approach in this context. The objective of this study was to develop and validate a high throughput field phenotyping method of sorghum growth traits under contrasted water conditions relying on drone based imagery. Experiments were conducted in Bambey (Senegal) in 2018 and 2019, to test the ability of multi-spectral sensing technologies on-board a UAV platform to calculate various vegetation indices to estimate plants characteristics. In total, ten (10) contrasted varieties of West African sorghum collection were selected and arranged in a randomized complete block design with three (3) replicates and two (2) water treatments (well-watered and drought stress). This study focused on plant biomass, leaf area index (LAI) and the plant height that were measured weekly from emergence to maturity. Drone flights were performed just before each destructive sampling and images were taken by multi-spectral and visible cameras. UAV-derived vegetation indices exhibited their capacity of estimating LAI and biomass in the 2018 calibration data set, in particular: normalized difference vegetative index (NDVI), corrected transformed vegetation index (CTVI), seconded modified soil-adjusted vegetation index (MSAVI2), green normalize difference vegetation index (GNDVI), and simple ratio (SR) (r2 of 0.8 and 0.6 for LAI and biomass, respectively). Developed models were validated with 2019 data, showing a good performance (r2 of 0.92 and 0.91 for LAI and biomass accordingly). Results were also promising regarding plant height estimation (RMSE = 9.88 cm). Regression plots between the image-based estimation and the measured plant height showed a r2 of 0.83. The validation results were similar between water treatments. This study is the first successful application of drone based imagery for phenotyping sorghum growth and development in a West African context characterized by severe drought occurrence. The developed approach could be used as a decision support tool for breeding programs and as a tool to increase the throughput of sorghum genetic diversity characterization for adaptive traits.
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- 2021
30. Instraspecific variations of wing and thorax size of Glossina palpalis palpalis (Robineau-Desvoidy, 1830) in the forest region of Côte d'Ivoire
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B. Sané, P. Solano, A. Garcia, F. Fournet, and C. Laveissière
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Glossina palpalis ,Aile ,Thorax ,Mesure ,Facteur climatique ,Côte d'Ivoire ,Animal culture ,SF1-1100 - Abstract
Thorax and wing morphometry was studied in 497 Glossina palpalis palpalis caught on the outskirts of a village in the center-west of Côte d’Ivoire. Significant size differences were observed depending on the sex and season of catching. Tsetse flies caught at the end of the rainy season were bigger than those caught during the dry season. Within a G. p. palpalis population, the relation between climatic conditions and a fly might affect the latter’s vectorial capacity. New analytical methods in size measurement will help further specify these results.
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- 2000
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31. Variability in the physico-chemical properties of wood from Eucalyptus robusta depending on ecological growing conditions and forestry practices: The case of smallholdings in the Highlands of Madagascar
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Mevanarivo, Zo Elia, Ramananantoandro, Tahiana, Tomazello Filho, Mario, Napoli, Alfredo, Razafimahatratra, Andriambelo Radonirina, Razakamanarivo, Ramarson Herintsitohaina, Chaix, Gilles, Mevanarivo, Zo Elia, Ramananantoandro, Tahiana, Tomazello Filho, Mario, Napoli, Alfredo, Razafimahatratra, Andriambelo Radonirina, Razakamanarivo, Ramarson Herintsitohaina, and Chaix, Gilles
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This study set out to determine which environmental factors of growth and silvicultural practices can affect the properties of Eucalyptus robusta coppice wood and also to study variability in those properties depending on the factors. Hundred and thirty-five coppice logs aged 2 to 10 years were collected from five zones in the Highlands of Madagascar. Wood density at 12% moisture content was measured by X-ray microdensitometry. Chemical properties, such as the total extractives, Klason lignin and holocellulose contents were predicted using near infrared spectrometry prediction models. The results significantly showed (p-value<0,001) that wood density (543 – 836 kg/m3), total extractives (3,1 – 9,8%) and Klason lignin content (24,6 – 35,3%) increased with age, with the opposite occurring for holocellulose (63,8 – 69,9%). Wood density also varied significantly (p-value<0,001) depending on the zones, which was not the case for chemical properties. The densest woods were found at the hottest zones with less acid soils. Woods were less dense in zones, characterized by high rainfall and a soil rich in nitrogen and organic carbon. The plantation spacing, elevation of the zone and soil texture did not significantly affect wood properties.
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- 2020
32. L'agriculture de décrue en Afrique de l'Ouest et du centre. Une certaine résilience face à la variabilité climatique et à la régulation des fleuves
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Dieye, Mohamadou, Dia, Djiby, Barbier, Bruno, Sylla, El Hadji Malick, Sall, Mamadou, Bader, Jean-Claude, Bossa, Aymar Yaovi, Sanfo, Safiétou, Fall, Cheickh Sadibou, Dieye, Mohamadou, Dia, Djiby, Barbier, Bruno, Sylla, El Hadji Malick, Sall, Mamadou, Bader, Jean-Claude, Bossa, Aymar Yaovi, Sanfo, Safiétou, and Fall, Cheickh Sadibou
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- 2020
33. Pearl millet genomic vulnerability to climate change in West Africa highlights the need for regional collaboration
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Rhone, Bénédicte, Defrance, Dimitri, Berthouly-Salazar, Cécile, Mariac, Cédric, Cubry, Philippe, Couderc, Marie, Dequincey, Anaïs, Assoumane, Aichatou, Kane, Ndjido Ardo, Sultan, Benjamin, Barnaud, Adeline, Vigouroux, Yves, Rhone, Bénédicte, Defrance, Dimitri, Berthouly-Salazar, Cécile, Mariac, Cédric, Cubry, Philippe, Couderc, Marie, Dequincey, Anaïs, Assoumane, Aichatou, Kane, Ndjido Ardo, Sultan, Benjamin, Barnaud, Adeline, and Vigouroux, Yves
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Climate change is already affecting agro-ecosystems and threatening food security by reducing crop productivity and increasing harvest uncertainty. Mobilizing crop diversity could be an efficient way to mitigate its impact. We test this hypothesis in pearl millet, a nutritious staple cereal cultivated in arid and low-fertility soils in sub-Saharan Africa. We analyze the genomic diversity of 173 landraces collected in West Africa together with an extensive climate dataset composed of metrics of agronomic importance. Mapping the pearl millet genomic vulnerability at the 2050 horizon based on the current genomic-climate relationships, we identify the northern edge of the current areas of cultivation of both early and late flowering varieties as being the most vulnerable to climate change. We predict that the most vulnerable areas will benefit from using landraces that already grow in equivalent climate conditions today. However, such seed-exchange scenarios will require long distance and trans-frontier assisted migrations. Leveraging genetic diversity as a climate mitigation strategy in West Africa will thus require regional collaboration.
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- 2020
34. Environmental and trophic determinism of fruit abscission and outlook with climate change in tropical regions
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Tisne, Sébastien, Denis, Marie, Domonhedo, Hubert, Pallas, Benoît, Cazemajor, Michel, Tranbarger, Timothy John, Morcillo, Fabienne, Tisne, Sébastien, Denis, Marie, Domonhedo, Hubert, Pallas, Benoît, Cazemajor, Michel, Tranbarger, Timothy John, and Morcillo, Fabienne
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Fruit abscission facilitates the optimal conditions and timing of seed dispersal. Environmental regulation of tropical fruit abscission has received little attention, even though climate change may have its strongest impacts in tropical regions. In this study, oil palm fruit abscission was monitored during multiple years in the Benin Republic to take advantage of the climatic seasonality and the continuous fruit production by this species. An innovative multivariable statistical method was used to identify the best predictors of fruit abscission among a set of climate and ecophysiological variables, and the stage of inflorescence and fruit bunch development when the variables are perceived. The effects of climate scenarios on fruit abscission were then predicted based on the calibrated model. We found complex regulation takes place at specific stages of inflorescence and bunch development, even long before the fruit abscission zone is competent to execute abscission. Among the predictors selected, temperature variations during inflorescence and fruit bunch development are major determinants of the fruit abscission process. Furthermore, the timing of ripe fruit drop is determined by temperature in combination with the trophic status. Finally, climate simulations revealed that the abscission process is robust and is more affected by seasonal variations than by extreme scenarios. Our investigations highlighted the central function of the abscission zone as the sensor of environmental signals during reproductive development. Coupling ecophysiological and statistical modeling was an efficient approach to disentangle this complex environmental regulation.
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- 2020
35. African plum (Dacryodes edulis [G. Don] H.J. Lam) fruit development indexes clearly defined and phenophases correlated with temperature in the tropics
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Mbeguie-A-Mbeguie Didier, Ntsomboh-Ntsefong Godswill, Nono Carine Temegne, Youmbi Emmanuel, Nsangou Salamatou Mpemboura, and Tonfack Libert Brice
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biology ,P40 - Météorologie et climatologie ,Fruit development ,food and beverages ,Tropics ,F62 - Physiologie végétale - Croissance et développement ,Plant Science ,Facteur climatique ,biology.organism_classification ,General Biochemistry, Genetics and Molecular Biology ,Physiologie végétale ,Horticulture ,date de récolte ,Dacryodes edulis ,Phénologie ,Agronomy and Crop Science ,Food Science - Abstract
Dacryodes edulis (G. Don) H.J. Lam is an underexploited oil-bearing fruit tree highly appreciated in the Central Africa rainforest. To improve horticultural management and provide relevant data to scientists for physiological studies, the reproductive phenology of D. edulis as well as their fruit (safou) development and ripening indexes has been defined and correlated to climatic conditions. Changes in safou were assessed in four production localities in Cameroon. Fruit-set-to-ripening time was evaluated over 2 consecutive production years. Four fruits developmental and ripening stages and their durations were determined as follows: The putative cell division (1–2 weeks); putative elongation (10–14 weeks); pre-ripening (2–7 weeks); and ripening phases (3–5 weeks). Rainfall, average, and cumulative temperatures were found to be correlated with the chronology of reproductive phenophases. The average temperature during the period ranging from the floral bud emergence to the fruit set can be used to predict the thermal time. Similarly, the average ambient temperature during the period from floral bud emergence to anthesis can help to determine the temperature to be cumulated during the ripening phase. These findings are considerable contributions that could help producers to enhance the industrial management of safou sector, reduce fruit perishability, and better control their harvesting time.
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- 2021
36. The powdery mildew disease of rubber (Oidium heveae) is jointly controlled by the winter temperature and host phenology
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Philippe Thaler, Yiqi Luo, Jianchu Xu, De-Li Zhai, Kunming Institute of Botany [CAS] (KIB), Chinese Academy of Sciences [Beijing] (CAS), Ecologie fonctionnelle et biogéochimie des sols et des agro-écosystèmes (UMR Eco&Sols), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Northern Arizona University [Flagstaff], World Agroforestry Center [CGIAR, Chine] (ICRAF), World Agroforestry Center [CGIAR, Kenya] (ICRAF), Consultative Group on International Agricultural Research [CGIAR] (CGIAR)-Consultative Group on International Agricultural Research [CGIAR] (CGIAR), National Natural Science Foundation of China (NSFC) and the Belmont Forum Collaborative Research Action 'Mountains as Sentinels of Change -2015' (No. 41661144001), and Key Research Program of Frontier Sciences, the Chinese Academy of Sciences (QYZDY-SSW-SMC014). This work is also supported by Key Research Project (No. 2017YFC0505101)
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Atmospheric Science ,010504 meteorology & atmospheric sciences ,Health, Toxicology and Mutagenesis ,Winter warming ,Facteur climatique ,01 natural sciences ,0302 clinical medicine ,Maladie des plantes ,Developing regions ,Oidium heveae ,Ecology ,biology ,Phenology ,Plant physiology ,food and beverages ,Horticulture ,Hevea brasiliensis ,visual_art ,visual_art.visual_art_medium ,Phénologie ,Powdery mildew ,Oidium (manifestation maladies) ,Conditions météorologiques ,03 medical and health sciences ,Natural rubber ,Rubber plantation ,Partial least square (PLS) regression ,0105 earth and related environmental sciences ,H20 - Maladies des plantes ,030203 arthritis & rheumatology ,Host (biology) ,biology.organism_classification ,Température ,[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy ,Hiver ,13. Climate action ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology - Abstract
International audience; Rubber powdery mildew disease (Oidium heveae) is a serious threat to natural rubber production (Hevea brasiliensis) in some rubber developing regions of the world. Both phenological- and meteorological-related factors have been reported influencing the powdery mildew disease. However, few studies have investigated the effects of both phenological- and meteorological-related factors on the disease. The objective of this study is to quantify the contributions of phenological- and meteorological-related factors to affect the disease. We used the partial least squares (PLS) regression method to comprehensively quantify the effects of thirty-five phenological related factors and six meteorological factors on the infection level of powdery mildew of rubber trees over 9-year records (2003–2011). The relative contributions of significant factors were further investigated by the variation partition analysis. We found that the most influential variables were the mean temperature during winter and the duration of leaf development to maturation which explained 32 and 26% of the variations in the infection level. We found the controlling role of winter mean temperature, for the first time, on the infection level of powdery mildew. The controlling role of winter temperature may have directly increase the infection level when winter temperature is high and indirectly increase the infection level through prolonging the duration of leaf development to maturation, although the duration itself had smaller influences. We detected a warming trend of the winter temperatures from 2003 to 2011, which indicates that the infection level of powdery mildew will be increased if the winter warming continues.
- Published
- 2021
37. Chemical composition of cool-climate grapes and enological parameters of cool-climate wines.
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Tarko, Tomasz, Duda-Chodak, Aleksandra, Satora, Paweł, Sroka, Paweł, and Gojniczek, Iga
- Abstract
Introduction. Wines produced in cool climate regions may be competitive with wines obtained in traditional wine-producing countries. The aim of this paper was to conduct a quality analysis of the chemical composition of selected varieties of cool-climate grapes and to assess the enological parameters of wines obtained from them. Materials and methods. The chemical composition of 11 varieties of grapes as well as the basic enological parameters, profile of volatile components, and antioxidant and sensory properties of wines obtained from selected varieties were assessed. Results and discussion. The extract content of the assessed varieties of grapes varied within the range of 128.5–218.5 g×kg–1. The fruit was characterised by similar acidity but significantly heterogeneous antioxidant activity. The basic quality parameters of wines were in accordance with the EU regulations. Antioxidant activity and polyphenol content in red wines were approximately 5–7 times higher than those in white wines. In the sensory assessment the wines obtained high grades. Conclusion. Wines from the cool climate regions fulfil the EU normative requirements and are characterised by original sensory features. They may compete with products from traditional wine-producing countries. [ABSTRACT FROM PUBLISHER]
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- 2014
- Full Text
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38. Pearl millet genomic vulnerability to climate change in West Africa highlights the need for regional collaboration
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Bénédicte Rhoné, Dimitri Defrance, Cécile Berthouly-Salazar, Cédric Mariac, Philippe Cubry, Marie Couderc, Anaïs Dequincey, Aichatou Assoumanne, Ndjido Ardo Kane, Benjamin Sultan, Adeline Barnaud, and Yves Vigouroux
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P40 - Météorologie et climatologie ,Evolution ,Science ,adaptation aux changements climatiques ,Facteur climatique ,Article ,F30 - Génétique et amélioration des plantes ,génomique ,Résistance aux facteurs nuisibles ,Genetics ,genomic features [EN] ,Pennisetum glaucum ,Adaptation physiologique ,mil chandelle ,lcsh:Science ,atténuation des effets du changement climatique ,Diversité génétique (comme ressource) ,phytogénétique ,collaboration ,Environmental sciences ,Rendement des cultures ,lcsh:Q ,Plant sciences - Abstract
Climate change is already affecting agro-ecosystems and threatening food security by reducing crop productivity and increasing harvest uncertainty. Mobilizing crop diversity could be an efficient way to mitigate its impact. We test this hypothesis in pearl millet, a nutritious staple cereal cultivated in arid and low-fertility soils in sub-Saharan Africa. We analyze the genomic diversity of 173 landraces collected in West Africa together with an extensive climate dataset composed of metrics of agronomic importance. Mapping the pearl millet genomic vulnerability at the 2050 horizon based on the current genomic-climate relationships, we identify the northern edge of the current areas of cultivation of both early and late flowering varieties as being the most vulnerable to climate change. We predict that the most vulnerable areas will benefit from using landraces that already grow in equivalent climate conditions today. However, such seed-exchange scenarios will require long distance and trans-frontier assisted migrations. Leveraging genetic diversity as a climate mitigation strategy in West Africa will thus require regional collaboration., Replacement of local crops with alternative varieties adapted to future conditions may improve food security under climate change. Here the authors apply landscape genomics and ensemble climate modelling to pearl millet in West Africa, supporting the potential of transfrontier assisted seed exchange.
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- 2020
39. Pre and postharvest assessment of mango anthracnose incidence and severity in the north of Côte d’Ivoire
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Daouda Koné, Brahima Camara, Dio Dramane Dembele, Ler-N'Og n Dadé Georges Elisée Amari, Isabelle Grechi, and Jean-Yves Rey
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0106 biological sciences ,Wet season ,Veterinary medicine ,Biology ,medicine.disease_cause ,Facteur climatique ,01 natural sciences ,Crop ,Maladie des plantes ,Dry season ,Infestation ,medicine ,Anthracnose ,H20 - Maladies des plantes ,Abiotic component ,Incidence (epidemiology) ,Mangifera indica ,04 agricultural and veterinary sciences ,Maladie postrécolte ,040103 agronomy & agriculture ,Postharvest ,Anthracnose, incidence, severity, mango, symptoms ,0401 agriculture, forestry, and fisheries ,Orchard ,010606 plant biology & botany - Abstract
Mango is one of the most economically important fruit crop in the north of Côte d’Ivoire. However, its production and productivity are limited by various biotic and abiotic factors. Amongst fungal disease, mango anthracnose is recorded to be the most important disease in the northern districts. This study assessed the incidence and severity of pre- and post-harvest anthracnose to compare the level of orchard infestation in the seven mango producing districts in the north of Côte d’Ivoire. Anthracnose disease incidence and severity varied from locality to locality both in dry and rainy season. Disease intensity was higher in rainy season than dry season. In dry and rainy seasons, the highest disease incidence (19.08% and 32.25%) was recorded in Bèrèdougou and the least in Zèguèrè. Pre and post-harvest anthracnose correlated significantly indicating that infection initiated in field and remained latent until fruits repining. The disease was also more severe on fruits than leaves. On fruits disease incidence and severity were higher in Dianra village (90% and 100%) and Bèrèdougou (36% and 40%). The lowest disease incidence (7.5%) and severity (1.5%) on fruits were observed in Zèguèrè. This study showed that anthracnose disease is one the most important threat to production and marketing of fresh mango fruits in the north of Côte d’Ivoire.Keywords: Anthracnose, incidence, severity, mango, symptoms.
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- 2020
40. Trend and Sensitivity Analysis of Reference Evapotranspiration in the Senegal River Basin Using NASA Meteorological Data
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Ndiaye, P.M., Bodian, A., Diop, L., Deme, A., Dezetter, A., Djaman, K., Ogilvie, Andrew, Université Gaston Berger de Saint-Louis Sénégal (UGB), Hydrosciences Montpellier (HSM), Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS), New Mexico State University, Gestion de l'Eau, Acteurs, Usages (UMR G-EAU), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-AgroParisTech-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Institut national des sciences de l'Univers (INSU - CNRS)-Institut de Recherche pour le Développement (IRD)-Université Montpellier 2 - Sciences et Techniques (UM2)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-AgroParisTech-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
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Mann-Kendall test ,SENEGAL ,ZONE SOUDANOGUINEENNE ,lcsh:Hydraulic engineering ,VARIATION SAISONNIERE ,VENT ,ANALYSE SPATIALE ,Penman-Monteith ,METEOROLOGIE ,ZONE SOUDANOSAHELIENNE ,[SDU.STU.ME]Sciences of the Universe [physics]/Earth Sciences/Meteorology ,HUMIDITE RELATIVE ,lcsh:Water supply for domestic and industrial purposes ,lcsh:TC1-978 ,1984 2017 ,reference evapotranspiration ,[SDU.STU.HY]Sciences of the Universe [physics]/Earth Sciences/Hydrology ,TEMPERATURE ,ZONE GUINEENNE ,lcsh:TD201-500 ,EVAPOTRANSPIRATION ,ZONE SAHELIENNE ,sensitivity coefficient ,Senegal river basin ,MAURITANIE ,EVOLUTION ,BASSIN VERSANT ,VARIATION ANNUELLE ,FLEUVE SENEGAL VALLEE ,COURS D'EAU ,FACTEUR CLIMATIQUE ,CHANGEMENT CLIMATIQUE - Abstract
Understanding evapotranspiration and its long-term trends is essential for water cycle studies, modeling and for water uses. Spatial and temporal analysis of evapotranspiration is therefore important for the management of water resources, particularly in the context of climate change. The objective of this study is to analyze the trend of reference evapotranspiration (ET0) as well as its sensitivity to climatic variables in the Senegal River basin. Mann-Kendall&rsquo, s test and Sen&rsquo, s slope were used to detect trends and amplitude changes in ET0 and climatic variables that most influence ET0. Results show a significant increase in annual ET0 for 32% of the watershed area over the 1984&ndash, 2017 period. A significant decrease in annual ET0 is observed for less than 1% of the basin area, mainly in the Sahelian zone. On a seasonal scale, ET0 increases significantly for 32% of the basin area during the dry season and decreases significantly for 4% of the basin during the rainy season. Annual maximum, minimum temperatures and relative humidity increase significantly for 68%, 81% and 37% of the basin, respectively. However, a significant decrease in wind speed is noted in the Sahelian part of the basin. The wind speed decrease and relative humidity increase lead to the decrease in ET0 and highlight a &ldquo, paradox of evaporation&rdquo, in the Sahelian part of the Senegal River basin. Sensitivity analysis reveals that, in the Senegal River basin, ET0 is more sensitive to relative humidity, maximum temperature and solar radiation.
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- 2020
41. Variability in the physico-chemical properties of wood from Eucalyptus robusta depending on ecological growing conditions and forestry practices: The case of smallholdings in the Highlands of Madagascar
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Gilles Chaix, Tahiana Ramananantoandro, Zo Elia Mevanarivo, Mario Tomazello Filho, Alfredo Napoli, Andriambelo Radonirina Razafimahatratra, Herintsitohaina Razakamanarivo, Ecole Supérieure des Sciences Agronomiques, Universidade de São Paulo (USP), BioWooEB (UPR BioWooEB), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Département Performances des systèmes de production et de transformation tropicaux (Cirad-PERSYST), Université d'Antananarivo, Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Département Systèmes Biologiques (Cirad-BIOS), CIRAD by Agropolis Fondation, DP Fôret et Biodiversité, and ANR-10-IDEX-0001,PSL,Paris Sciences et Lettres(2010)
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Eucalyptus robusta ,Soil texture ,Facteur écologique ,Materials Science (miscellaneous) ,F08 - Systèmes et modes de culture ,Climate ,[SDV]Life Sciences [q-bio] ,F62 - Physiologie végétale - Croissance et développement ,SILVICULTURA ,Facteur climatique ,rotation ,Industrial and Manufacturing Engineering ,Petite exploitation agricole ,soil ,chemistry.chemical_compound ,Coppicing ,coppice ,Chemical Engineering (miscellaneous) ,Lignin ,Water content ,Silviculture ,Propriété physicochimique ,Total organic carbon ,Forestry ,Facteur du milieu ,15. Life on land ,silvicultural practices ,wood properties ,Eucalyptus ,K10 - Production forestière ,Pratique culturale ,chemistry ,Agronomy ,Soil water ,Environmental science ,Propriété du bois - Abstract
This study set out to determine which environmental factors of growth and silvicultural practices can affect the properties of Eucalyptus robusta coppice wood and also to study variability in those properties depending on the factors. Hundred and thirty-five coppice logs aged 2 to 10 years were collected from five zones in the Highlands of Madagascar. Wood density at 12% moisture content was measured by X-ray microdensitometry. Chemical properties, such as the total extractives, Klason lignin and holocellulose contents were predicted using near infrared spectrometry prediction models. The results significantly showed (p-value
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- 2020
42. Near-future ocean warming and acidification alter foraging behaviour, locomotion, and metabolic rate in a keystone marine mollusc
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Horwitz, R., Norin, T., Watson, S.-A., Pistevos, J.C.A., Beldade, R., Hacquart, S., Gattuso, J.P., Rodolfo-Metalpa, Riccardo, Vidal-Dupiol, J., Killen, S.S., and Mills, S.C.
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RECIF CORALLIEN ,METABOLISME ,FACTEUR CLIMATIQUE ,LIEVRE DE MER ,BIOLOGIE ,INVERTEBRE AQUATIQUE ,ETHOLOGIE ,RECHAUFFEMENT CLIMATIQUE ,ACIDIFICATION ,IMPACT SUR L'ENVIRONNEMENT ,CYANOBACTERIE TOXIQUE - Abstract
Environmentally-induced changes in fitness are mediated by direct effects on physiology and behaviour, which are tightly linked. We investigated how predicted ocean warming (OW) and acidification (OA) affect key ecological behaviours (locomotion speed and foraging success) and metabolic rate of a keystone marine mollusc, the sea hare Stylocheilus striatus, a specialist grazer of the toxic cyanobacterium Lyngbya majuscula. We acclimated sea hares to OW and/or OA across three developmental stages (metamorphic, juvenile, and adult) or as adults only, and compare these to sea hares maintained under current-day conditions. Generally, locomotion speed and time to locate food were reduced ~1.5- to 2-fold when the stressors (OW or OA) were experienced in isolation, but reduced ~3-fold when combined. Decision-making was also severely altered, with correct foraging choice nearly 40% lower under combined stressors. Metabolic rate appeared to acclimate to the stressors in isolation, but was significantly elevated under combined stressors. Overall, sea hares that developed under OW and/or OA exhibited a less severe impact, indicating beneficial phenotypic plasticity. Reduced foraging success coupled with increased metabolic demands may impact fitness in this species and highlight potentially large ecological consequences under unabated OW and OA, namely in regulating toxic cyanobacteria blooms on coral reefs.
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- 2020
43. Environmental and trophic determinism of fruit abscission and outlook with climate change in tropical regions
- Author
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Tisné, S., Denis, M., Domonhédo, H., Pallas, B., Cazemajor, M., Tranbarger, Timothy, Morcillo, F., Amélioration génétique et adaptation des plantes méditerranéennes et tropicales (UMR AGAP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Écophysiologie des Plantes sous Stress environnementaux (LEPSE), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Institut National de Recherche Agricole du Bénin (INRAB), INRAB, PalmElit, Diversité, adaptation, développement des plantes (UMR DIADE), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud]), Département Systèmes Biologiques (Cirad-BIOS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), PalmElit SAS/IRD/CIRAD/CRA-PP, Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Institut de Recherche pour le Développement (IRD [France-Sud])-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)
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Changement climatique ,Abscission ,ZONE TROPICALE ,P40 - Météorologie et climatologie ,Facteur lié au site ,F60 - Physiologie et biochimie végétale ,[SDV]Life Sciences [q-bio] ,Facteur du milieu ,Facteur climatique ,BENIN ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,Elaeis guineensis ,Adaptation physiologique - Abstract
International audience; Fruit abscission facilitates the optimal conditions and timing of seed dispersal. Environmental regulation of tropical fruit abscission has received little attention, even though climate change may have its strongest impacts in tropical regions. In this study, oil palm fruit abscission was monitored during multiple years in the Benin Republic to take advantage of the climatic seasonality and the continuous fruit production by this species. An innovative multivariable statistical method was used to identify the best predictors of fruit abscission among a set of climate and ecophysiological variables, and the stage of inflorescence and fruit bunch development when the variables are perceived. The effects of climate scenarios on fruit abscission were then predicted based on the calibrated model. We found complex regulation takes place at specific stages of inflorescence and bunch development, even long before the fruit abscission zone is competent to execute abscission. Among the predictors selected, temperature variations during inflorescence and fruit bunch development are major determinants of the fruit abscission process. Furthermore, the timing of ripe fruit drop is determined by temperature in combination with the trophic status. Finally, climate simulations revealed that the abscission process is robust and is more affected by seasonal variations than by extreme scenarios. Our investigations highlighted the central function of the abscission zone as the sensor of environmental signals during reproductive development. Coupling ecophysiological and statistical modeling was an efficient approach to disentangle this complex environmental regulation. K E Y W O R D S climate change, Elaeis guineensis, environmental regulation, fruit abscission, multivariable models
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- 2020
44. Influences of edaphoclimatic conditions on deep rooting and soil water availability in Brazilian Eucalyptus plantations
- Author
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Ilenia Murgia, Cassio Hamilton Abreu-Junior, Jean-Paul Laclau, Marcelo Carvalho Minhoto Teixeira Filho, Thiago Assis Rodrigues Nogueira, Gian Franco Capra, Vinicius Evangelista Silva, Salatiér Buzetti, Zhenli He, Eleonora Grilli, Vimef-Soluções Florestais, Partenaires INRAE, Universidade Estadual Paulista Júlio de Mesquita Filho = São Paulo State University (UNESP), Universidade de São Paulo (USP), University of Florida [Gainesville] (UF), Ecologie fonctionnelle et biogéochimie des sols et des agro-écosystèmes (UMR Eco&Sols), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Università della Campania Luigi Vanvitelli, Università degli Studi di Sassari, School of Agricultural, Forest and Food Sciences, Bern University of Applied Sciences (BFH), Desertification Research Centre, University of Sassari, Instituto de Pesquisas e Estudos Florestais–IPEF,Tolerancia de Eucalyptus Clonais aos Estresses Hídrico, Térmico eBiótico–TECHS Cooperative Research Program and the 26 fundingcompanies: Anglo American, Arauco, Arborgen, ArcelorMittal, Cenibra, CMPC, Copener, Duratex, Eldorado Brasil Celulose, Fazenda CampoBom, Fibria, Florestal Itaquari, orestal Oriental, Gerdau, GMR, Grande do Norte, Brazil, CNPq and Fapesp, Brazil, Colorado StateUniversity, USA, North Carolina State University, USA, USDA ForestService (USA), and University of Sassari, (fondo di Ateneo per laricerca 2019), Vimef-Soluções Florestais Ltda, Universidade Estadual Paulista (Unesp), University of Florida, Montpellier SupAgro, UMR Eco&Sols, Università della Campania 'Luigi Vanvitelli', Polo Bionaturalistico, and Bern University of Applied Science
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0106 biological sciences ,Stand development ,Inceptisol ,Management, Monitoring, Policy and Law ,Facteur climatique ,F50 - Anatomie et morphologie des plantes ,010603 evolutionary biology ,01 natural sciences ,Soil development ,Entisols ,Teneur en eau du sol ,Oxisols ,Nature and Landscape Conservation ,P30 - Sciences et aménagement du sol ,Enracinement ,Forestry ,15. Life on land ,Eucalyptus urophylla ,Soil type ,Plantation forestière ,Eucalyptus ,Facteur édaphique ,K10 - Production forestière ,Agronomy ,Oxisol ,Soil water ,Sol de forêt ,Environmental science ,Soil horizon ,Deep rooting ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,Entisol ,010606 plant biology & botany - Abstract
Made available in DSpace on 2020-12-12T02:29:22Z (GMT). No. of bitstreams: 0 Previous issue date: 2020-01-01 Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) Colorado State University North Carolina State University Universidade Federal de Lavras Universidade Federal do Rio Grande do Norte Università degli Studi di Sassari U.S. Forest Service Universidade de São Paulo ArcelorMittal International Paper Brazilian roundwood industry is one of the most important and productive in the world, with Eucalyptus plantations alone representing 73% of the total planted forests. Deep rooting in these plantations represents a more common phenomena than generally expected. However, there is still a lack of information on environmental factors that drive root growth in deep soil layers, with particular emphasis on edaphoclimatic conditions, and related consequence in terms of soil water behavior. As a part of a larger project, this research aimed to investigate soil water and fine root system distribution in deep tropical soils under a commercial Eucalyptus plantation chronosequence. Along a 2800-km gradient (from south- to north-east Brazil), 14 experimental areas were planted with a “plastic” clone (E. urophylla) and investigated in terms of climatic conditions, soil and water features, and plant/stand development for an entire 6-years rotation period. Fine roots distribution were investigated in one site (in Brazil) till to 20 m deep at 3, 9, 24, 48, and 65 months after planting. Results showed a fast displacement of the root front down to 75, 325, 825, 1250, and 1575 cm at month 3, 9, 24, 48, and 65 after planting, respectively. Fine root densities (g cm−3) and proportional water capture exponentially decreased with soil depth. Deep fine roots showed a relativelly higher efficiency in acquiring water than the shallower, denser roots. The relationship between stand height vs root front depth followed an exponential trend, suggesting that these stands developed relatively faster in height rather than in depth during the first 48 months, with the opposite characterizing plantation afterwards. Regardless of stand age, E. urophylla trees rapidly explored a considerable volume of soil at a relatively limited carbon cost. Multivariate statistics showed that edaphoclimatic conditions play a major role in Eucalyptus plant/stand development. This study outlined the major role played by soil development. From poorly developed sandy Entisols, to medium developed Inceptisols, and to most developed fine textured Oxisols, both plant growth and stand productivity greatly improved accordingly. This study suggests that soil type, together with other environmental factors, are likely to influence both the development and behavior of Eucalyptus plantations for an extent greater than commonly anticipated. Vimef-Soluções Florestais Ltda, Rua Juca Prates, 1014 UNESP São Paulo State University School of Agricultural Sciences Department of Plant Protection Rural Engineering and Soils School of Engineering São Paulo State University Universidade de São Paulo Center of Nuclear Energy in Agriculture, Av. Centenário, 303 Institute of Food and Agricultural Sciences Indian River Research and Education Center University of Florida Eco&Sols Univ Montpellier CIRAD INRA IRD Montpellier SupAgro CIRAD UMR Eco&Sols Dipartimento di Scienze e Tecnologie Ambientali Biologiche e Farmaceutiche Università della Campania “Luigi Vanvitelli”, Via Vivaldi n◦ 43 Dipartimento di Architettura Design e Urbanistica Università degli Studi di Sassari Polo Bionaturalistico, Via Piandanna n° 4 School of Agricultural Forest and Food Sciences Bern University of Applied Science, Laenggasse 85 Desertification Research Centre Università degli Studi di Sassari, Viale Italia n◦ 39 UNESP São Paulo State University School of Agricultural Sciences Department of Plant Protection Rural Engineering and Soils School of Engineering São Paulo State University
- Published
- 2020
45. Risques climatiques et agriculture en Afrique de l'Ouest
- Author
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Dieye, Mohamadou, Dia, Djiby, Barbier, Bruno, Sylla, El Hadji Malick, Sall, Mamadou, Bader, Jean-Claude, Bossa, Aymar Yaovi, Sanfo, Safiétou, Fall, Cheickh Sadibou, Sultan, Benjamin (ed.), Bossa, A.Y. (ed.), Salack, S. (ed.), Sanon, M. (ed.), Gestion de l'Eau, Acteurs, Usages (UMR G-EAU), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-AgroParisTech-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), and Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
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[SDV.SA]Life Sciences [q-bio]/Agricultural sciences ,SENEGAL ,AFRIQUE DE L'OUEST ,P40 - Météorologie et climatologie ,F08 - Systèmes et modes de culture ,[SDV]Life Sciences [q-bio] ,Facteur climatique ,TCHAD LAC ,BENIN ,NIGERIA ,[SDU.STU.HY]Sciences of the Universe [physics]/Earth Sciences/Hydrology ,Changement climatique ,GOLFE DE GUINEE ,MALI ,FLEUVE SENEGAL VALLEE ,GHANA ,Gestion des eaux ,AFRIQUE CENTRALE ,[SDU]Sciences of the Universe [physics] ,Système de culture ,CAMEROUN ,[SDV.EE.BIO]Life Sciences [q-bio]/Ecology, environment/Bioclimatology ,Plaine d'inondation - Abstract
L'agriculture de décrue est un mode de production ancestral qui a permis aux populations des plaines inondables africaines de survivre, et même de développer des sociétés avancées comme l'Égypte pharaonique, le Tekrour, le Ghana, les empires malien ou songhaï. Elle a l'avantage de fournir une production appréciable en saison sèche, et nécessite très peu d'intrants et un travail limité. Si les rendements à l'hectare sont faibles, la productivité du travail est appréciable et explique l'engouement des riverains à son endroit, malgré la fréquente possibilité de la remplacer par une agriculture irriguée moderne. L'importance de cette pratique dans la sous-région ouest-africaine reste peu connue, car les services statistiques nationaux ont tendance à la négliger. Dans ce chapitre, nous passons en revue la littérature existante pour l'Afrique de l'Ouest et centrale, c'est-à-dire du Sénégal jusqu'au Tchad. L'objectif est de mieux appréhender les perspectives de cette agriculture, qui avait presque disparu pendant les grandes sécheresses des années 1980 et qui était censée disparaître définitivement avec la construction de plusieurs dizaines de barrages régulateurs sur les grands fleuves de la sous-région. Depuis, les plans de barrages ont été suspendus à cause de l'endettement des États et du rapport alarmant rendu par la Commission mondiale des barrages (WCD, 2000). Par ailleurs, les pluies sont en partie revenues, permettant aux riverains de certaines plaines inondables de relancer cette production, notamment dans plusieurs plaines du bassin du lac Tchad. Depuis quelque temps, les plans de barrages sont réapparus sur l'agenda des États et des agences de bassin. Si les bailleurs traditionnels sont toujours réticents, la Chine se montre déterminée à financer et réaliser ces projets de barrages qui avaient été enterrés dans les années 1990. Dans ce chapitre, les auteurs font un bilan zone par zone, en comparant les surfaces potentiellement inondables, les surfaces cultivées, les cultures pratiquées et les techniques de production spécifiques à ces zones.
- Published
- 2020
46. Inorganic fertilizer use efficiency of millet crop increased with organic fertilizer application in rainfed agriculture on smallholdings in central Senegal
- Author
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Laurent Cournac, François Affholder, Adama Tounkara, Saliou Ndiaye, Cathy Clermont-Dauphin, Dominique Masse, LMI IESOL Intensification Ecologique des Sols Cultivés en Afrique de l’Ouest [Dakar] (IESOL), Institut de recherche pour le développement (IRD [Sénégal]), Université de Thiès, Ecologie fonctionnelle et biogéochimie des sols et des agro-écosystèmes (UMR Eco&Sols), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Agroécologie et Intensification Durables des cultures annuelles (UPR AIDA), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Département Performances des systèmes de production et de transformation tropicaux (Cirad-PERSYST), IRD ARTS program under the grant 862166G, ICRISAT research program on Grain Legumes and Dryland Cereals (CRP GLDC), Kansas State University through the SIMCO project funded by USAID though award No. AID-OAA-L-14-00006 (Prime Agreement), Subaward #S15115, and ANR-13-AGRO-0002,CERAO,Auto-adaptation des agro-socio-écosystèmes tropicaux face aux changements globaux ? Etude à long terme en vue d'une intensification écologique de la production de céréales dans les zones de savanes en Afrique de l'Ouest.(2013)
- Subjects
[SDV.SA]Life Sciences [q-bio]/Agricultural sciences ,0106 biological sciences ,Rotation culturale ,Pluie ,F08 - Systèmes et modes de culture ,millet ,Facteur climatique ,01 natural sciences ,Agronomic use efficiency ,Crop rotation ,Striga ,Inorganic fertilizer ,Rainfed agriculture ,Mathematics ,2. Zero hunger ,Engrais organique ,Ecology ,biology ,Rainfall distribution ,04 agricultural and veterinary sciences ,Fertilizer ,Striga hermonthica ,P40 - Météorologie et climatologie ,[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study ,engineering.material ,010603 evolutionary biology ,Fertilisation ,Culture pluviale ,Engrais NPK ,Fertilité du sol ,business.industry ,Organic manure strategies (OMS) ,15. Life on land ,biology.organism_classification ,Manure ,Agronomy ,Agriculture ,040103 agronomy & agriculture ,engineering ,0401 agriculture, forestry, and fisheries ,Animal Science and Zoology ,business ,Agronomy and Crop Science ,Organic fertilizer ,F04 - Fertilisation - Abstract
International audience; Much effort has been spent on formulating guidelines for inorganic fertilizer use in millet crops in Sub-sahelian farms. However, these guidelines do not take into account the diversity of manuring practices. In this study we analyzed over two years (2016–2017) the use efficiency of an inorganic NPK fertilizer as affected by the two most contrasted categories of organic manure strategies (OMS) found in millet fields of central Senegal. 19 farmers’ fields were selected in a village typical of that region, 11 and 8 of which respectively corresponding to categories OMS1 and OMS2 as follows: OMS1, locally referred to as Homefields, were fields continuously cropped with millet over the last 15 years, having received organic manure regularly in the past, and manured again at the onset of the 2016 rainy season. OMS2 fields locally referred to as Outfields, were not manured in 2016 and were rarely manured in the past. Four of them were continuously cropped with millet and the others had followed a triennial millet-peanut-fallow rotation. In 2017, no manure was applied in any of the OMS1 or OMS2 fields. A pairwise treatments with and without the same inorganic fertilizer dose was applied in each field in both 2016 and 2017 cropping seasons. In 2016, the higher the manure application, the higher the use efficiency of the inorganic fertilizer applied. The use efficiency of the inorganic N was most closely related to soil bulk density and P availability. In 2017, with no new manure amendment, millet yield in OMS1 was about three times higher than in 2016. It was close to the water-limited yield, suggesting that the residual effect of the manure applied in 2016 was high. The use efficiency of the inorganic N was generally low under these conditions. In OMS2, millet yield and use efficiency of inorganic fertilizer remained low in both years. The crop rotation with peanuts did not enrich the soil compared to the millet returning every year, but it reduced Striga hermontica infestation and increased the millet 1000-grain weight. The methodological approach developed here may help in formulating guidelines to deal with the diversity of farming practices in Sub-sahelian villages.
- Published
- 2020
47. Cocoa agroforestry is less resilient to suboptimal and extreme climate than cocoa in full sun: Reply to Norgrove (2017)
- Author
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Munir P. Hoffmann, Richard Asare, Sophie Graefe, Laurence Jassogne, Issaka Abdulai, Piet J.A. van Asten, Reimund P. Rötter, and Philippe Vaast
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Extreme climate ,010504 meteorology & atmospheric sciences ,media_common.quotation_subject ,Arbre d'ombrage ,Agroforesterie ,010501 environmental sciences ,Facteur climatique ,01 natural sciences ,Competition (biology) ,Trees ,systèmes agroforestiers ,chaleur ,Environmental Chemistry ,Theobroma cacao ,Resilience (network) ,0105 earth and related environmental sciences ,General Environmental Science ,media_common ,2. Zero hunger ,Global and Planetary Change ,Résistance à la température ,Ecology ,Agroforestry ,Shade tree ,Tolérance à la chaleur ,Water ,15. Life on land ,Geography ,Compétition interspécifique - Abstract
Resilience of cocoa agroforestry vs. full sun under extreme climatic conditions. In the specific case of our study, the two shade tree species associated with cocoa resulted in strong competition for water and became a disadvantage to the cocoa plants contrary to expected positive effects.
- Published
- 2018
48. Effets du microclimat sur le développement de l'épidémie de rouille orangée du caféier Arabica (Hemileia vastatrix - Coffea arabica) dans une gamme de situations de production
- Author
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Merle, Isabelle and Merle, Isabelle
- Abstract
Depuis 2012, la rouille orangée du caféier, une maladie foliaire causée par le champignon Hemileia vastatrix, provoque de fortes épidémies sur la culture du café Arabica dans l'ensemble des pays d'Amérique Centrale. Cette année-là, c'est environ 20% de la production qui a été perdue et la mort de rameaux, voire des plants de café ont entraîné d'importantes pertes secondaires de production les années suivantes. La caféiculture offrant de nombreux emplois en Amérique Centrale, ces épidémies ont entraîné une crise sociale importante. Pour éviter les futures épidémies, le programme PROCAGICA (Programa Centroamericano para la Gestión de la Roya del Café), initié en 2016, grâce à un financement de l'Union Européenne, vise à mettre en place des mesures telles que la création d'un réseau régional d'avertissement, basé sur des systèmes nationaux renforcés, incluant une composante de pronostic basé sur les variables météorologiques. Dans la plupart des modèles de prédiction déjà disponibles sur cette maladie, les variables météorologiques sont considérées sur de longues périodes pour expliquer des indicateurs tels que l'incidence reflétant la progression de la maladie mais aussi la croissance de l'hôte. Au cours de cette thèse, nous avons émis l'hypothèse qu'il est possible de prédire la croissance des épidémies à l'aide de la modélisation de différents stades de développement du champignon, chacun déterminé par des combinaisons complexes de variables microclimatiques agissant à des périodes (moments et durées) différentes. Pour mieux comprendre le fonctionnement du pathosystème et ainsi définir les variables à prédire, nous avons d'abord décrit les relations causales qui existent entre la phénologie du caféier Arabica, le développement de la rouille orangée et leur environnement en système agroforestier. Grâce à l'analyse en modèles d'équations structurelles, l'effet global controversé de l'ombrage sur la maladie a été expliqué comme étant la résultante d'effets antagonistes
- Published
- 2019
49. Wetting-drying cycles do not increase organic carbon and nitrogen mineralization in soils with straw amendment
- Author
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Isabelle Bertrand, Martial Bernoux, Tiphaine Chevallier, Pierrot Lionel Yemadje, Hervé Guibert, Ecologie fonctionnelle et biogéochimie des sols et des agro-écosystèmes (UMR Eco&Sols), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Agroécologie et Intensification Durables des cultures annuelles (UPR AIDA), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), and C2D Cameroun Project
- Subjects
[SDV.SA]Life Sciences [q-bio]/Agricultural sciences ,Crop residue ,010504 meteorology & atmospheric sciences ,MINERALISATION ,01 natural sciences ,STOCKAGE ,C-13 isotope ,[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/Geochemistry ,Priming effect ,Périodicité ,2. Zero hunger ,chemistry.chemical_classification ,FERTILITE DU SOL ,Chemistry ,13C isotope ,food and beverages ,Soil chemistry ,Residues ,04 agricultural and veterinary sciences ,Straw ,CARBONE ,FACTEUR CLIMATIQUE ,Minéralisation du carbone ,Nitrogen ,Soil Science ,Wetting-drying cycles ,Saison sèche ,AZOTE ,Soil organic carbon mineralization ,Organic matter ,0105 earth and related environmental sciences ,Soil organic matter ,MATIERE ORGANIQUE ,P30 - Sciences et aménagement du sol ,Mineralization (soil science) ,15. Life on land ,Saison humide ,Agronomy ,13. Climate action ,Soil water ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,Soil fertility ,Minéralisation de l'azote - Abstract
Increasing soil organic matter (SOM) is of primary importance for maintaining soil fertility and mitigating climate change. Leaving crop residues on top of soil is not always an efficient means of increasing SOM because (i) of the high mineralization of the crop residues, (ii) crop residues may increase the mineralization of existing SOM (priming effect) and (iii) wetting-drying cycles may increase mineralization of SOM and crop residues. Little research has been carried out into these mechanisms under Sudano-Sahelian conditions where the rainfall is mostly irregular with wetting-drying cycles during the transition between the wet and the dry season. To evaluate the effect of wetting-drying cycles on the mineralization of SOM and crop residues and the priming effect, an agricultural soil from the North Region of Cameroon with or without (controls) 13 C-labeled rice straw amendment as crop residues was either subjected to five wetting-drying cycles or maintained at constant water potential after a single rewetting event. Soil samples were incubated for 70 days at 28 °C and the CO 2 and 13 CO 2 emissions and mineral N were monitored. Adding straw (+ 833 μg C g − 1 soil) increased the cumulative CO 2 emissions from the soil (+ 921 μg C-CO 2 g − 1 soil). A positive priming effect was observed (+ 92 μg C-CO 2 g − 1 soil). Only the first wetting cycle created a mineralization flush of the SOM and the straw. This flush did not recur probably because of a lack of labile SOM. However an extra addition of straw after 28 days increased CO 2 emissions but did not result in further mineralization flushes after re-wetting while SOM mineralization was not limited by N availability. We conclude that SOM depletion under Sudano-Sahelian conditions was not explained by SOM mineralization enhancement due to multiple rewetting events or to priming effect following crop residues addition. Indeed, SOM depletion could rather be explained by a high level of mineralization of both, SOM and crop residues, when the soil reached its water retention capacity.
- Published
- 2017
50. Plant community structure and nitrogen inputs modulate the climate signal on leaf traits
- Author
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Cyrille Violle, Henry Brisse, Sylvain Diquélou, Alexis Mikolajczak, Nicolas Viovy, Guilhem Debarros, Sandra Lavorel, Eric Garnier, Bernard Amiaud, Benjamin Borgy, Claudy Jolivet, Pierre Denelle, Patrice de Ruffray, Jens Kattge, Servane Lemauviel-Lavenant, Peter M. van Bodegom, Michael Bahn, Jenny C. Ordoñez, Jean Olivier, Philippe Choler, Jessy Loranger, François Munoz, Sophie Gachet, Centre d’Ecologie Fonctionnelle et Evolutive (CEFE), Université Paul-Valéry - Montpellier 3 (UPVM)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Centre de Synthèse et d’Analyse sur la Biodiversité (CESAB), Fondation pour la recherche sur la Biodiversité (FRB), Université de Grenoble, Laboratoire d'Ecologie Alpine (LECA ), Université Savoie Mont Blanc (USMB [Université de Savoie] [Université de Chambéry])-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019]), Centre National de la Recherche Scientifique (CNRS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Institut National de la Recherche Agronomique (INRA), École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL), Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Université de Montpellier (UM), Botanique et Modélisation de l'Architecture des Plantes et des Végétations (UMR AMAP), Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Institut National de la Recherche Agronomique (INRA)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD [France-Sud]), Max Planck Institute for Biogeochemistry (MPI-BGC), Max-Planck-Gesellschaft, German Centre for Integrative Biodiversity Research, Université de Sherbrooke (UdeS), Ecologie et Ecophysiologie Forestières [devient SILVA en 2018] (EEF), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), University of Innsbruck, VU University Amsterdam, Fédération des Conservatoires Botaniques Nationaux, Ecophysiologie Végétale, Agronomie et Nutritions (EVA), Université de Caen Normandie (UNICAEN), Normandie Université (NU)-Normandie Université (NU)-Institut National de la Recherche Agronomique (INRA), InfoSol (InfoSol), Conservatoire Botanique National Alpin, Institut de biologie moléculaire des plantes (IBMP), Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA), Université de Strasbourg (UNISTRA), Laboratoire des Sciences du Climat et de l'Environnement [Gif-sur-Yvette] (LSCE), Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ), Modélisation des Surfaces et Interfaces Continentales (MOSAIC), Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ), Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut National de la Recherche Agronomique (INRA)-Université Paul-Valéry - Montpellier 3 (UPVM)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut de Recherche pour le Développement (IRD [France-Sud]), Vrije universiteit = Free university of Amsterdam [Amsterdam] (VU), Systems Ecology, Université Paul-Valéry - Montpellier 3 (UM3)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-École pratique des hautes études (EPHE)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Laboratoire d'Ecologie Alpine (LECA), Centre National de la Recherche Scientifique (CNRS)-Université Savoie Mont Blanc (USMB [Université de Savoie] [Université de Chambéry])-Université Joseph Fourier - Grenoble 1 (UJF)-Université Grenoble Alpes (UGA), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud]), Sherbrooke University, Unité INFOSOL (ORLEANS INFOSOL), Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS), Université Paris-Saclay-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Centre National de la Recherche Scientifique (CNRS), Université de Versailles Saint-Quentin-en-Yvelines (UVSQ), Institut de Recherche pour le Développement (IRD [France-Sud])-Centre National de la Recherche Scientifique (CNRS)-École pratique des hautes études (EPHE)-Université de Montpellier (UM)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université Paul-Valéry - Montpellier 3 (UM3), Institut National de la Recherche Agronomique (INRA)-Université de Caen Normandie (UNICAEN), Normandie Université (NU)-Normandie Université (NU), Université Paul-Valéry - Montpellier 3 (UPVM)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-École Pratique des Hautes Études (EPHE), École Pratique des Hautes Études (EPHE), Leopold Franzens Universität Innsbruck - University of Innsbruck, Vrije Universiteit Amsterdam [Amsterdam] (VU), Conservatoire Botanique National Alpin (CBNA), Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), and Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)
- Subjects
0106 biological sciences ,Biogeochemical cycle ,community functional structure ,Specific leaf area ,plant community ,permanent pastures ,Growing season ,Biology ,modèle ,010603 evolutionary biology ,01 natural sciences ,growing season length ,fertilisation ,permanent grasslands ,functional biogeography ,Nutrient ,trait foliaire ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,environmental gradients ,Relative species abundance ,Ecology, Evolution, Behavior and Systematics ,2. Zero hunger ,numerical models ,écosystème terrestre ,Global and Planetary Change ,Ecology ,land management ,terrestrial ecosystems ,facteur climatique ,Plant community ,prairie permanente ,Vegetation ,biogeochemical cycle ,15. Life on land ,functional diversity ,communauté végétale ,Agronomy ,fertilization ,plant traits ,13. Climate action ,azote disponible ,Terrestrial ecosystem ,cycle biogéochimique ,010606 plant biology & botany - Abstract
Aim: Leaf traits strongly impact biogeochemical cycles in terrestrial ecosystems. Understanding leaf trait variation along environmental gradients is thus essential to improve the representation of vegetation in Earth system models. Our aims were to quantify relationships between leaf traits and climate in permanent grasslands at a biogeographical scale and to test whether these relationships were sensitive to (a) the level of nitrogen inputs and (b) the inclusion of information pertaining to plant community organization. Location: Permanent grasslands throughout France. Methods: We combined existing datasets on climate, soil, nitrogen inputs (fertilization and deposition), species composition and four traits, namely specific leaf area, leaf dry matter content and leaf nitrogen and phosphorus concentrations, for 15,865 French permanent grasslands. Trait–climate relationships were tested using the following four climatic variables available across 1,833 pixels (5 km × 5 km): mean annual temperature (MAT) and precipitation (MAP), and two indices accounting for the length of the growing season. We compared these relationships at the pixel level using either using community-level or species’ trait means. Results: Our findings were as follows: (a) leaf traits related to plant nutrient economy shift consistently along a gradient of growing season length accounting for temperature and soil water limitations of plant growth (GSLtw); (b) weighting leaf traits by species abundance in local communities is pivotal to capture leaf trait–environment relationships correctly at a biogeographical scale; and (c) the relationships between traits and GSLtw weaken for grasslands with a high nitrogen input. Main conclusions: The effects of climate on plant communities are better described using composite descriptors than coarse variables such as MAT or MAP, but appear weaker for high-nitrogen grasslands. Using information at the community level tends to strengthen trait–climate relationships. The interplay of land management, community assembly and bioclimate appears crucial to the prediction of leaf trait variations and their effects on biogeochemical cycles.
- Published
- 2017
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