72 results on '"Fazli subhan"'
Search Results
2. Molding robust S-box design based on linear fractional transformation and multilayer Perceptron: Applications to multimedia security
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Adil Waheed, Fazli Subhan, Mazliham Mohd Su'ud, and Muhammad Mansoor Alam
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S-box ,Nonlinearity ,Multilayer perceptron ,Image encryption ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
This study introduces a novel and refined approach for generating exceptionally efficient S-boxes. The proposed methodology employs a hybrid approach that combines linear fractional transformation (LFT) with a multilayer perceptron (MLP) architecture. This method makes use of a perceptron with three layers: input, hidden, and output. Each layer's neuron count is fine-tuned to conform to the S-box layout. In addition, a threshold nonlinear transformation is utilized to increase nonlinearity, and a novel algorithm for boosting nonlinearity is introduced. The utilization of both LFT and MLP approaches has led to the development of S-boxes that possess nearly ideal average nonlinearity values, surpassing those that have been presented in literature. Notably, one S-box achieved an exceptional nonlinearity score of 114.50. Furthermore, to demonstrate how well the S-box works, this study also employs it in an image encryption application.
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- 2024
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3. Construction of nonlinear component of block cipher using coset graph
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Adil Waheed, Fazli Subhan, Mazliham Mohd Suud, Muhammad Yasir Hayat Malik, Alina Mirza, and Farkhanda Afzal
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s-box ,nonlinear component ,coset diagram ,nonlinearity ,security ,block cipher ,Mathematics ,QA1-939 - Abstract
In recent times, the research community has shown interest in information security due to the increasing usage of internet-based mobile and web applications. This research presents a novel approach to constructing the nonlinear component or Substitution Box (S-box) of block ciphers by employing coset graphs over the Galois field. Cryptographic techniques are employed to enhance data security and address current security concerns and obstacles with ease. Nonlinear component is a keystone of cryptography that hides the association between plaintext and cipher-text. Cryptographic strength of nonlinear component is directly proportional to the data security provided by the cipher. This research aims to develop a novel approach for construction of dynamic S-boxes or nonlinear components by employing special linear group $ PSL(2, \mathbb{Z}) $ over the Galois Field $ GF\left({2}^{10}\right) $. The vertices of coset diagram belong to $ GF\left({2}^{10}\right) $ and can be expressed as powers of α, where α represents the root of an irreducible polynomial $ p\left(x\right) = {x}^{10}+{x}^{3}+1 $. We constructed several nonlinear components by using $ {GF}^{*}\left({2}^{10}\right) $. Furthermore, we have introduced an exceptionally effective algorithm for optimizing nonlinearity, which significantly enhances the cryptographic properties of the nonlinear component. This algorithm leverages advanced techniques to systematically search for and select optimal S-box designs that exhibit improved resistance against various cryptographic attacks.
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- 2023
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4. Design and optimization of nonlinear component of block cipher: Applications to multimedia security
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Adil Waheed, Fazli Subhan, Mazliham Mohd Suud, Muhammad Mansoor Alam, and Sajjad Haider
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S-box ,Nonlinear component ,Image encryption ,Nonlinearity ,Security ,Chaotic maps ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
Nowadays, various image encryption schemes based on chaotic systems have been developed, each of them has its own limitations and strength in terms of security and computational speed. The proposed image encryption scheme utilizes 2-D maps without disturbing their mathematical structure, characterized by topological features such as chaotic behavior and fractal properties, namely the Zaslavasky, Bakers, and Henon Maps. This approach utilizes both confusion and diffusion stages to achieve high levels of security against various attacks. The confusion stage utilizes chaotic values to muddle the rows and columns of the image, reducing the correlations between neighboring pixels, while the diffusion step achieves the avalanche effect with 2D Bakers map and Henon map. The proposed image encryption scheme is analyzed thoroughly to evaluate its security and performance. To evaluate the security and computational efficiency of the proposed image encryption method, various analysis such as correlation, contrast, entropy, energy, homogeneity, and performance analyses are conducted. Moreover, the three proposed S-boxes are also tested to evaluate their effectiveness using cryptographic analysis tests such as nonlinearity, strict Avalanche criterion, differential probability, linear probability, and bit independence criterion, which we also utilized in our proposed image encryption scheme.
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- 2024
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5. Deep Learning Based Anomaly Detection for Fog-Assisted IoVs Network
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Shumayla Yaqoob, Asad Hussain, Fazli Subhan, Giuseppina Pappalardo, and Muhammad Awais
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Fog computing ,smooth communication ,Internet of Vehicles ,anomaly detection ,fog-assisted IoVs ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Internet of vehicles (IoVs) allows millions of vehicles to be connected and share information for various purposes. The main applications of IoVs are traffic management, emergency messages delivery, E-health, traffic, and temperature monitoring. On the other hand, IoVs lack in location awareness and geographic distribution, which is critical for some IoVs applications such as smart traffic lights and information sharing in vehicles. To support these topographies, fog computing was proposed as an appealing and novel term, which was integrated with IoVs to extend storage, computation, and networking. Unfortunately, it is also challenged with various security and privacy hazards, which is a serious concern of smart cities. Therefore, we can formulate that Fog-assisted IoVs (Fa-IoVs), are challenged by security threats during information dissemination among mobile nodes. These security threats of Fa-IoVs are considered as anomalies which is a serious concern that needs to be addressed for smooth Fa-IoVs network communication. Here, smooth communication refers to less risk of important data loss, delay, communication overhead, etc. This research work aims to identify research gaps in the Fa-IoVs network and present a deep learning-based dynamic scheme named CAaDet (Convolutional autoencoder Aided anomaly detection) to detect anomalies. CAaDet exploits convolutional layers with a customized autoencoder for useful feature extraction and anomaly detection. Performance evaluation of the proposed scheme is done by using the F1-score metric where experiments are carried out by exploiting a benchmark dataset named NSL-KDD. CAaDet also observes the behavior of fog nodes and hidden neurons and selects the best match to reduce false alarms and improve F1-score. The proposed scheme achieved significant improvement over existing schemes for anomaly detection. Identified research gaps in Fa-IoVs can give future directions to researchers and attract more attention to this new era.
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- 2023
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6. A deep learning‐based approach for software vulnerability detection using code metrics
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Fazli Subhan, Xiaoxue Wu, Lili Bo, Xiaobing Sun, and Muhammad Rahman
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Computer software ,QA76.75-76.765 - Abstract
Abstract Vulnerabilities can have devastating effects on information security, affecting the economy, social stability, and national security. The idea of automatic vulnerability detection has always attracted researchers. From traditional manual vulnerability mining techniques to static and dynamic detection, all rely on human experts for feature definition. The rapid development of machine learning and deep learning has alleviated the tedious task of manually defining features by human experts while reducing the lack of objectivity caused by human subjective awareness. However, it is still necessary to find an objective characterisation method to define the features of vulnerabilities. Therefore, the authors use code metrics for code characterisation, sequences of metrics representing code. To use code metrics for vulnerability detection, a deep learning‐based vulnerability detection approach that uses a composite neural network of convolutional neural network (CNN) with long short‐term memory (LSTM) is proposed. The authors conduct experiments independently using the proposed approach for CNN‐LSTM CNN, LSTM, gated recurrent units (GRU), and deep neural network (DNN). The authors’ experimental results show that CNN‐LSTM has a high precision of 92%, a recall of 99%, and an accuracy of 91%. In terms of the F1‐score, it is 95%, compared to previous research results, which indicated an improvement of 18%. Compared to other deep learning‐based vulnerability detection models, the authors’ proposed model produced a lower false‐positive rate, a lower miss rate, and improved accuracy.
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- 2022
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7. An overview of dengue viral infection circulating in Pakistan
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Liaqat Ali, Zakkia Gul, Asiya Ijaz, Nouman Khalid, Falak Zeb, Samia Afzal, Anayat Ullah, Fazli Subhan, and Saeed Ahmed
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dengue virus ,serotypes ,prevalence ,pathogenesis ,non-structural proteins ,Infectious and parasitic diseases ,RC109-216 - Abstract
Background & objectives: Dengue virus (DENV) is an RNA virus that infects approximately 2.5 billion people around the world. The incidence of dengue fever has rapidly increased at an alarming rate in the last few years and has affected thousands of people in Pakistan. This review explores the prevalence, serotypes and pathogenesis of dengue virus circulating in Pakistan. Methods: A systematic review of observational studies published between 1994 and December 2019 was performed. All records of the confirmed outbreak of dengue fever in Pakistan were reviewed and articles containing no primary data were excluded. Results: Four identified serotypes of dengue virus (DENV 1-4) circulate in different regions of the world causing epidemics. The most prevalent serotype, which is still epidemic and dominant in Pakistan, is DENV-2. Many factors like over-population, rapid urbanization, travelling, lack of vector control in dengue endemic areas and inadequate health-care are responsible of dynamic and huge raise of dengue in Pakistan. Interpretation & conclusion: Currently there is no specific treatment for prevention of dengue virus. Recently some antiviral compounds were being tested to eradicate this disease. There is a need to develop an efficient and safe vaccine for all four serotypes to combat dengue viral infection globally and particularly in Pakistan.
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- 2022
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8. Evaluation of antinociceptive activity of Ilex dipyrena Wall. in mice
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Amjad Ali, Abdul Nasir, Syed Wadood Ali Shah, Atif Ali Khan Khalil, Mi-jeong Ahn, Syed Muhammad Mukarram Shah, Fazli Subhan, Muhammad Faheem, Wasim Sajjad, Mohammad Shoaib, Saeed Ahmad, Nausheen Nazir, and Mohammad Nisar
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Ilex dipyrena ,Analgesic effect ,Mouse models ,Opioidergic ,GABAergic ,Other systems of medicine ,RZ201-999 - Abstract
Abstract Background In order to find a new natural resource for pain-relief, the analgesic effects of Ilex dipyrena crude extract, fractions, and subfractions were evaluated in in-vivo mouse models with possible mechanism of action. Methods Analgesic effects of crude extract (100 and 200 mg/kg body weight), fractions and subfractions (75 mg/kg body weight) were screened using heat-induced (tail-immersion and hot plate test) and chemical-induced (formalin and acetic acid) nociception models in mice. The samples were also tested for the elucidation of a possible mechanism through opioidergic and GABAergic systems. Results The administration of crude extract, fractions and subfractions produced analgesic responses in acetic acid, formalin, tail immersion, and hot plate model for pain similar to those obtained with the standard. Naloxone antagonized the antinociceptive effects of the tested samples, whereas bicuculline showed partial inhibition. Considering the analgesic response, crude extract, fractions, and subfractions demonstrated promising inhibitory activity against all test models for pain, which was further supported by the possible involvement of opioidergic and GABAergic systems. Conclusion The results suggest that this plant may be useful in the development of new analgesic drugs. Further research with regard to the isolation of bioactive compounds is required to verify these findings.
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- 2021
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9. Decision Support System for Predicting Survivability of Hepatitis Patients
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Fahad R. Albogamy, Junaid Asghar, Fazli Subhan, Muhammad Zubair Asghar, Mabrook S. Al-Rakhami, Aurangzeb Khan, Haidawati Mohamad Nasir, Mohd Khairil Rahmat, Muhammad Mansoor Alam, Adidah Lajis, and Mazliham Mohd Su'ud
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disease diagnosis ,deep learning ,hepatitis diagnostics ,decision support system ,bidirectional LSTM ,Public aspects of medicine ,RA1-1270 - Abstract
Background and ObjectiveViral hepatitis is a major public health concern on a global scale. It predominantly affects the world's least developed countries. The most endemic regions are resource constrained, with a low human development index. Chronic hepatitis can lead to cirrhosis, liver failure, cancer and eventually death. Early diagnosis and treatment of hepatitis infection can help to reduce disease burden and transmission to those at risk of infection or reinfection. Screening is critical for meeting the WHO's 2030 targets. Consequently, automated systems for the reliable prediction of hepatitis illness. When applied to the prediction of hepatitis using imbalanced datasets from testing, machine learning (ML) classifiers and known methodologies for encoding categorical data have demonstrated a wide range of unexpected results. Early research also made use of an artificial neural network to identify features without first gaining a thorough understanding of the sequence data.MethodsTo help in accurate binary classification of diagnosis (survivability or mortality) in patients with severe hepatitis, this paper suggests a deep learning-based decision support system (DSS) that makes use of bidirectional long/short-term memory (BiLSTM). Balanced data was utilized to predict hepatitis using the BiLSTM model.ResultsIn contrast to previous investigations, the trial results of this suggested model were encouraging: 95.08% accuracy, 94% precision, 93% recall, and a 93% F1-score.ConclusionsIn the field of hepatitis detection, the use of a BiLSTM model for classification is better than current methods by a significant margin in terms of improved accuracy.
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- 2022
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10. Inter-agency collaboration and disaster management: A case study of the 2005 earthquake disaster in Pakistan
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Ikram Shah, Tahir Mahmood, Sajjad A. Khan, Noor Elahi, Muhammad Shahnawaz, Adnan A. Dogar, Fazli Subhan, and Khoula Begum
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disaster ,disaster management ,2005 earthquake ,inter-agency collaboration ,erra ,pakistan ,Risk in industry. Risk management ,HD61 - Abstract
In post disastrous situations, coordinated and integrated interventions aimed at relief and rehabilitation not only help facilitate reaching out to the affected communities in a timely fashion but also pave the way to channel scarce and valued resources towards end users in an efficient and effective manner. This article attempts to trace the origins and gradual development of ‘inter-agency collaboration’ and the implications thereof for disaster management strategies in Pakistan through an analysis of relief and rehabilitation interventions undertaken by the Government of Pakistan in collaboration with local and international Non-governmental Organisations (NGOs) and relief agencies in the ex post of the 2005 earthquake. Data for this study were collected through structured and semi-structured interviews from government officials, representatives of NGOs and relief agencies and ordinary women and men in the earthquake stricken localities of Balakot and Mansehra districts of Pakistan. On the heels of the 2005 earthquake, both local NGOs and faith-based organisations in concert with international NGOs and relief agencies from around the world rushed to assist Pakistan in it’s rescue and relief operations at a time when the country was faced with the twin dilemma of both the non-existence of peculiar institutional arrangements for disaster management and a lack of the necessary technical and financial resources. The aftermath of the 2005 earthquake offered opportunity to the Government of Pakistan and the NGOs and relief agencies alike to transform their individual interventions into a robust and organised ‘inter-agency collaboration’, which was later on realised in the form of establishment of a national disaster management organisation called the ‘Earthquake Reconstruction and Rehabilitation Authority (ERRA)’. The establishment of ERRA not only paved the way for avoiding duplication and wastage of resources but also ensued in reaching out to the affected communities in a timely fashion. The Pakistani case offers implications in terms of highlighting the salience of establishing ‘inter-agency collaboration’ in other settings.
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- 2022
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11. AI-Enabled Wearable Medical Internet of Things in Healthcare System: A Survey
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Fazli Subhan, Alina Mirza, Mazliham Bin Mohd Su’ud, Muhammad Mansoor Alam, Shibli Nisar, Usman Habib, and Muhammad Zubair Iqbal
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AI ,healthcare ,IoMT ,wearable devices ,detection ,monitoring ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Technology has played a vital part in improving quality of life, especially in healthcare. Artificial intelligence (AI) and the Internet of Things (IoT) are extensively employed to link accessible medical resources and deliver dependable and effective intelligent healthcare. Body wearable devices have garnered attention as powerful devices for healthcare applications, leading to various commercially available devices for multiple purposes, including individual healthcare, activity alerts, and fitness. The paper aims to cover all the advancements made in the wearable Medical Internet of Things (IoMT) for healthcare systems, which have been scrutinized from the perceptions of their efficacy in detecting, preventing, and monitoring diseases in healthcare. The latest healthcare issues are also included, such as COVID-19 and monkeypox. This paper thoroughly discusses all the directions proposed by the researchers to improve healthcare through wearable devices and artificial intelligence. The approaches adopted by the researchers to improve the overall accuracy, efficiency, and security of the healthcare system are discussed in detail. This paper also highlights all the constraints and opportunities of developing AI enabled IoT-based healthcare systems.
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- 2023
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12. A Systematic Review on Clone Node Detection in Static Wireless Sensor Networks
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Muhammad Numan, Fazli Subhan, Wazir Zada Khan, Saqib Hakak, Sajjad Haider, G. Thippa Reddy, Alireza Jolfaei, and Mamoun Alazab
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Wireless sensor networks (WSNs) ,clone attack ,clone attack detection schemes ,systematic literature review (SLR) ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
The recent state of the art innovations in technology enables the development of low-cost sensor nodes with processing and communication capabilities. The unique characteristics of these low-cost sensor nodes such as limited resources in terms of processing, memory, battery, and lack of tamper resistance hardware make them susceptible to clone node or node replication attack. The deployment of WSNs in the remote and harsh environment helps the adversary to capture the legitimate node and extract the stored credential information such as ID which can be easily re-programmed and replicated. Thus, the adversary would be able to control the whole network internally and carry out the same functions as that of the legitimate nodes. This is the main motivation of researchers to design enhanced detection protocols for clone attacks. Hence, in this paper, we have presented a systematic literature review of existing clone node detection schemes. We have also provided the theoretical and analytical survey of the existing centralized and distributed schemes for the detection of clone nodes in static WSNs with their drawbacks and challenges.
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- 2020
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13. Towards a Low Complexity Scheme for Medical Images in Scalable Video Coding
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Muhammad Shoaib, Muhammad Imran, Fazli Subhan, and Iftikhar Ahmad
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eHealth ,medical imaging ,scalable video coding ,flexible macroblock ordering ,slice coding ,low complexity ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Medical imaging has become of vital importance for diagnosing diseases and conducting noninvasive procedures. Advances in eHealth applications are challenged by the fact that Digital Imaging and Communications in Medicine (DICOM) requires high-resolution images, thereby increasing their size and the associated computational complexity, particularly when these images are communicated over IP and wireless networks. Therefore, medical research requires an efficient coding technique to achieve high-quality and low-complexity images with error-resilient features. In this study, we propose an improved coding scheme that exploits the content features of encoded videos with low complexity combined with flexible macroblock ordering for error resilience. We identify the homogeneous region in which the search for optimal macroblock modes is early terminated. For non-homogeneous regions, the integration of smaller blocks is employed only if the vector difference is less than the threshold. Results confirm that the proposed technique achieves a considerable performance improvement compared with existing schemes in terms of reducing the computational complexity without compromising the bit-rate and peak signal-to-noise ratio.
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- 2020
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14. Impact of Node Deployment and Routing for Protection of Critical Infrastructures
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Fazli Subhan, Madiha Noreen, Muhammad Imran, Moeenuddin Tariq, Asfandyar Khan, and Muhammad Shoaib
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Linear wireless sensor networks ,node placement ,clustering ,network lifetime ,energy efficiency ,performance analysis ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Recently, linear wireless sensor networks (LWSNs) have been eliciting increasing attention because of their suitability for applications such as the protection of critical infrastructures. Most of these applications require LWSN to remain operational for a longer period. However, the non-replenishable limited battery power of sensor nodes does not allow them to meet these expectations. Therefore, a shorter network lifetime is one of the most prominent barriers in large-scale deployment of LWSN. Unlike most existing studies, in this paper, we analyze the impact of node placement and clustering on LWSN network lifetime. First, we categorize and classify existing node placement and clustering schemes for LWSN and introduce various topologies for disparate applications. Then, we highlight the peculiarities of LWSN applications and discuss their unique characteristics. Several application domains of LWSN are described. We present three node placement strategies (i.e., linear sequential, linear parallel, and grid) and various deployment methods such as random, uniform, decreasing distance, and triangular. Extensive simulation experiments are conducted to analyze the performance of the three state-of-the-art routing protocols in the context of node deployment strategies and methods. The experimental results demonstrate that the node deployment strategies and methods significantly affect LWSN lifetime.
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- 2019
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15. PGPRs of plum (Prunus domestica) rhizosphere enhance plant growth and antagonise fungal activity in vitro
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Izhar Ali, Tariq Sultan, Fazli Subhan, Kashif Syed Haleem, Nighat Sultana, and Isfahan Tauseef
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bio-fertilizer ,diversity ,pgpr ,plant growth ,plum ,Plant culture ,SB1-1110 - Abstract
Plant growth promoting rhizobacteria (PGPR) promote the plant growth by various direct and indirect mechanisms. The present study was undertaken to isolate and characterise the PGPRs of plum (Prunus domestica) rhizosphere in Pakistan. A total of 95 rhizobacteria were isolated, out of which 40 strains were selected on the basis of morphological, biochemical and Gram staining characteristics. The selected isolates were screened for in vitro plant growth promoting potential and were subsequently evaluated for host plant growth promotion. The selected isolates demonstrated strong lytic enzymatic activities and were able to produce ammonia, siderophore, Hydrogen cyanide along with capability of phosphate solubilisation. Moreover, the results showed a significant growth suppression of pathogenic Fusarium oxysporum and Rhizoctonia solani in an in vitro assay. The plant microbe interaction study was carried out using 11 most efficient rhizobacterial strains inoculated to roots of plum plants. The inoculated PGPRs significantly augmented the leaves number per shoot, shoot diameter, shoot length and plant height. The inoculation also significantly increased the chlorophyll contents of leaves, concentration of micro and macro nutrients compared with control. The current study shows the importance of these selected PGPRs as bio-fertilizer to improve the health and productivity of plum species in Pakistan.
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- 2018
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16. A Review of Urdu Sentiment Analysis with Multilingual Perspective: A Case of Urdu and Roman Urdu Language
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Ihsan Ullah Khan, Aurangzeb Khan, Wahab Khan, Mazliham Mohd Su’ud, Muhammad Mansoor Alam, Fazli Subhan, and Muhammad Zubair Asghar
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preprocessing ,feature extraction ,classification ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
Research efforts in the field of sentiment analysis have exponentially increased in the last few years due to its applicability in areas such as online product purchasing, marketing, and reputation management. Social media and online shopping sites have become a rich source of user-generated data. Manufacturing, sales, and marketing organizations are progressively turning their eyes to this source to get worldwide feedback on their activities and products. Millions of sentences in Urdu and Roman Urdu are posted daily on social sites, such as Facebook, Instagram, Snapchat, and Twitter. Disregarding people’s opinions in Urdu and Roman Urdu and considering only resource-rich English language leads to the vital loss of this vast amount of data. Our research focused on collecting research papers related to Urdu and Roman Urdu language and analyzing them in terms of preprocessing, feature extraction, and classification techniques. This paper contains a comprehensive study of research conducted on Roman Urdu and Urdu text for a product review. This study is divided into categories, such as collection of relevant corpora, data preprocessing, feature extraction, classification platforms and approaches, limitations, and future work. The comparison was made based on evaluating different research factors, such as corpus, lexicon, and opinions. Each reviewed paper was evaluated according to some provided benchmarks and categorized accordingly. Based on results obtained and the comparisons made, we suggested some helpful steps in a future study.
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- 2021
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17. Pathogenesis of COVID-19: ACE2, Cytokine Storm and Extrapulmonary Manifestations
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Abdul Muhaymin Muhaymin, Hyder Wajid Abbasi, Muhammad Naeem, Naeem Ullah, Adnan Haider, Syed Babar Jamal, and Fazli Subhan
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ace2, covid-19 pathogenesis, cytokines storm, extrapulmonary manifestations. ,Science - Abstract
The coronavirus disease 19 (COVID-19) is a global pandemic of the twenty-first century and currently fourth wave is creating fear and panic worldwide. It is caused by severe acute respiratory syndrome coronavirus 2 (SARS-COV-2), a highly contagious viral infection of humans. The COVID-19 can be spread mainly through respiratory droplet particles and in contact with a COVID-19 infected person. Clinical manifestation of COVID-19 patients includes cough, fever, diarrhea, loss of taste and smell. In critical cases of COVID-19, the development of pneumonia and dyspnea leads to acute respiratory distress syndrome that may cause the death of the patient. It is well established that Angiotensin-Converting Enzyme 2 (ACE2) receptors on alveolar cells act as an entry gate for the SARS-COV-2. However, ACE2 is also highly expressed in multiple extrapulmonary vital organs such as the gastrointestinal system, cardiovascular system, kidney, etc. Therefore, the direct viral entry in these organs can be a likely pathway of injury. In addition, decoupling of immune responses leads to the cytokines storm, which might contribute to the injury of extrapulmonary organs. In this review, we report the multiple organ pathogenesis and clinical manifestations of COVID-19 patients, which could aid clinicians and researchers in prioritizing therapeutics remedies and developing research for all vital body systems involved.
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- 2021
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18. Epidermal Growth Factor-Like Domain-8 (EGFL8) in Mammals: The Story so far
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Fazli Subhan, Muhammad Naeem, Wasim Sajjad, Liaqat Ali, Isfahan Tauseef, and Syed Kashif Haleem
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endothelial, egfl, egfl8, notch, thymopoiesis. ,Science - Abstract
Epidermal growth factor-like domain-8 (EGFL8) also known as vascular endothelial statin-2 (VE-statin-2). It was identified by using retroviral gene entrapment vectors, expressed in endothelial cells. It is located on chromosome6inhumansandchromosome17inthemouse. EGFL8codesaproteinof293aminoacidswithan amino-terminal signal peptide and has two EGF-like domains. EGFL8 plays a very important regulatory role in thymopoiesis, cell migration and invasion through the modulation of Notch signaling. Although the signaling regulatory factors of EGFL8 need to be explored but recent scientific advances have revealed some important aspect of its regulation. This review summarizes the current knowledge about all aspects of EGFL8 since its discovery.
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- 2020
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19. Isolation, identification, and pathological effects of beach sand bacterial extract on human skin keratinocytes in vitro
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Fazli Subhan, Raheem Shahzad, Isfahan Tauseef, Kashif Syed Haleem, Atta-Ur Rehman, Sajid Mahmood, and In-Jung Lee
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Sequencing ,Skin ,Pathology ,Bacteria ,Beach sand ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
Background Beaches are recreational spots for people. However, beach sand contains harmful microbes that affect human health, and there are no established methods for either sampling and identifying beach-borne pathogens or managing the quality of beach sand. Method This study was conducted with the aim of improving human safety at beaches and augmenting the quality of the beach experience. Beach sand was used as a resource to isolate bacteria due to its distinctive features and the biodiversity of the beach sand biota. A selected bacterial isolate termed FSRS was identified as Pseudomonas stutzeri using 16S rRNA sequencing and phylogenetic analysis, and the sequence was deposited in the NCBI GenBank database under the accession number MF599548. The isolated P. stutzeri bacterium was cultured in Luria–Bertani growth medium, and a crude extract was prepared using ethyl acetate to examine the potential pathogenic effect of P. stutzeri on human skin. A human skin keratinocyte cell line (HaCaT) was used to assess cell adhesion, cell viability, and cell proliferation using a morphological analysis and a WST-1 assay. Result The crude P. stutzeri extract inhibited cell adhesion and decreased cell viability in HaCaT cells. We concluded that the crude extract of P. stutzeri FSRS had a strong pathological effect on human skin cells. Discussion Beach visitors frequently get skin infections, but the exact cause of the infections is yet to be determined. The beach sand bacterium P. stutzeri may, therefore, be responsible for some of the dermatological problems experienced by people visiting the beach.
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- 2018
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20. CLINICAL PRESENTATION AND OUTCOME OF 100 CASES OF FALCIPARUM MALARIA
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Iqbal Haider, Muhammad Saleem, imran khan, Fazli subhan, iftikhar muhammad, shahzad ahmad, and Aliena badshah
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Medicine - Abstract
Objective: To evaluate the clinical presentation and outcome of Falciparum malaria in 100 hospitalized patients. Methodology: This hospital based descriptive study was conducted at Department of Medicine, Khyber Teaching Hospital, Peshawar from January 2011 to November 2011. One hundred patients of either gender, aged more than 12 years, diagnosed to have falciparum malaria on the basis of peripheral blood smear findings were included. Detailed information was recorded regarding presenting symptoms and signs of patients, response of patients to drugs used for Falciparum malaria, and complications of malaria. Results: Main presenting symptoms were fever (100%), headache (85%), chills (76%), nausea/vomiting (73%), altered level of consciousness (28%), fits (7%) and oliguria (5%). The main signs of Falciparum malaria were splenomegaly (75%), hepatomegaly (67%), anemia (60%), herpes labialis (42%) and jaundice (20%). Female patients were 42%, of whom 17% were pregnant. Ninety eight (98%) patients were treated with quinine + doxycycline, out of which seven (7%) patients died. Two (2%) patients were treated with combination of artemether and lumafantrine, both recovered completely. The common complications were anemia (60%), cerebral malaria (28%), hepatitis (20%), pulmonary edema (10%), hypoglycemia (8%), thrombocytopenia (7%), fundal hemorrhages (6%), renal failure (6%) and disseminated intravascular coagulation (5%). Conclusion: Falciparum malaria can present in a diverse spectrum. Fever with chills, headache, vomiting and altered level of consciousness are the common presenting symptoms. Anemia, cerebral malaria, hepatitis and pulmonary edema are the common complications of falciparum malaria. Response to quinine with doxycycline is good and mortality rate is 7%. Key Words: Falciparum Malaria, Quinine, Artemether, Artemisin-Based Combination Therapy, Complications.
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- 2012
21. Role of Estimating Serum Luteinizing Hormone and Testosterone in Infertile Males
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Muhammad Shoaib Khan, Irshad Ali, Aziz Marjan Khattak, Faheem Tahir, Fazli Subhan, Birjees Mazhar Kazi, Jahanzeb Khan Aurakzai, and Nadia Usman
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Medicine - Abstract
Background: This study was aimed to determine the levels and ratios of serum LH and Testosterone, among men with history of infertility, having varying sperm counts. Material & Methods: Two hundred fifty married men, presenting with a complaint of infertility, who had been initially evaluated for their seminal profile, and had been classified into four (04) groups, as azoospermic (50), oligozoospermic (75), asthenozoospermic (50) and normozoospermic (75) were studied for the analysis of serum LH and Testosterone levels using Enzyme Immuno Assay (EIA), along with 50 proven fathers as a control group. The data was compared using student’s ‘t’ test. Results: LH indicated inverse/negative correlation to sperm concentration, while decreased Testosterone levels were associated with depleted sperm concentration. The mean levels of LH (mIU/ml) and Testosterone (nmol/L) for the groups were 13.85±2.33 and 11.86+0.70 (Azoospermia), 10.92±3.79 and 11.88+1.06 (Oligozoospermia), 3.92±1.17 and 16.24+2.05 (Asthenozoospermia), while the levels in normozoospermic men were 7.24±1.02 and 17.29+1.02, respectively. Similarly, the LH/T and T/LH ratios were 1.17(+/-0.28) and 0.86(+/-2.70) respectively in azoospermia, 0.92(+/-0.28)and 1.08(+/-0.17) in oligozoospermia, 0.30(+/-0.10)and 4.14(+/-10.4) in asthenozoospermia 0.42(+/-0.08) and 2.34(+/-0.48) in normozoospermic men. The proven fathers group had 7.74+0.71 mIU/ml LH and 15.88+ 1.15 nmol/ml testosterone, while the ratio of LH/T and T/LH was 0.49+ 0.28 and 2.05+ 0.33, respectively. Conclusion: The present data indicates that not only the disturbance in LH and Testosterone levels, but also disturbance in their ratios causes infertility, since these hormones act together by maintaining delicate feedback control system.
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- 2005
22. An Analysis of Genotype Frequencies of Blood Group Antigens from Bannu Region (NWFP) in Pakistan
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Mohammad Shoaib Khan, Faheem Tahir, Mubashir Ahmed Sheikh, Fazli Subhan, Birjees Mazhar Kazi, Athar Saeed Dil, Fariyal Deepa, Irshad Ali, and Musa Kaleem Baloch
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Medicine - Abstract
Objective: A community-based study was carried out on a random population sample from urban and rural areas of Bannu region, North West Frontier Province (NWFP) of Pakistan. The objective was to identify the genotypic frequency of blood groups in the region, in order to comprehend the allelic diversity. Material and Methods: Blood grouping was carried out over a period of 16 month from January 2002 to April 2003, and encompassed 2581 subjects, in which 57.09% were male and 42.09% female. These were categorized according to ABO/Rh system. Allele frequency was computed according to Hardy-Weinberg law. Results: The distribution of phenotypes in the total sample were 0.3623, 0.3103, 0.2507 and 0.0767 for group B, A, O and AB, respectively, with 0.672 Rh positive ® and 0.328 Rh negative (r). B group was dominant in both the genders, and AB was rare in both males as well as females. The distribution of the alleles in the total sample was 0.345, 0.378 and 0.277 for IA, IB and i, respectively. Conclusion: The studied population exhibited a predominance of group B, in the order of B>A>O>AB, as well as Rh positive antigen for both male (90.26%) and female (87.98%) subjects within the population, with Rh negative men and women being 9.74% and 12.02% respectively. Allele frequency recorded was in the order of IB>IA>i, and R>r.
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- 2004
23. Pattern of Semen Characteristics in Infertile Males
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Muhammad Shoaib Khan, Irshad Ali, Zulfaqar A. Khan, Faheem Tahir, Fazli Subhan, Fariyal Deepa, Waheed Alam, Birjees Mazhar Kazi, and Karamat A. Karamat
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Medicine - Abstract
Background: To observe the variation in semen quality of infertile men, with the purpose of generating preliminary data in our population. Material & Methods: Analysis of semen including volume, liquefaction time, pH, sperm concentration and quality was carried out over a period of 14 months from November 2003 to December 2004. A total of 350 men presenting as infertile couples were studied. Semen analysis was performed in Department of Reproductive Physiology/Health, Public Health Laboratories Division, National Institute of Health, Islamabad, as a part of fertility assessment. Results: According to the sperm concentration, the samples were categorized in four different groups; (A) Azoospermic group having absence of sperms, (B) Oligozoospermic group with a sperm concentration of less than 20 million/ml, (C) Asthenozoospermic group with a sperm concentration greater than 20 million/ml but with less than 25% of progressive motility and (D) Normozoospermic group with a sperm concentration of more than 20 million/ml and sperm motility of 60% or greater, with more than 25% progressive motility. Linear regression analysis shows a decrease in semen volume in group A and B. The mean liquefaction time showing linear increase in group A and B. The pH did not vary too much among all the groups. The mean of sperm concentration was 0, 6.7+1.7, 45.3+ 8.8 and 86.8 + 7.5 million/ml in groups A, B, C and D respectively. Conclusion: Semen analysis provides important information about the quality and quantity of the sperm and is an integral part of infertility work up.
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- 2004
24. Enhanced Fingerprinting Based Indoor Positioning Using Machine Learning
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Muhammad Waleed Pasha, Mir Yasir Umair, Alina Mirza, Faizan Rao, Abdul Wakeel, Safia Akram, Fazli Subhan, and Wazir Zada Khan
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Biomaterials ,Mechanics of Materials ,Modeling and Simulation ,Electrical and Electronic Engineering ,Computer Science Applications - Published
- 2021
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25. Position Vectors Based Efficient Indoor Positioning System
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Mir Yasir Umair, Fazli Subhan, Ayesha Javed, Alina Mirza, Abdul Wakeel, and Wazir Zada Khan
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Biomaterials ,Indoor positioning system ,Mechanics of Materials ,Computer science ,business.industry ,Modeling and Simulation ,Computer vision ,Artificial intelligence ,Electrical and Electronic Engineering ,business ,Computer Science Applications - Published
- 2021
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26. Maize (Zea mays) Response to Abiotic Stress
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Yousaf Ali, Taufiq Nawaz, Nazeer Ahmed, Muhammad Junaid, Mehwish Kanwal, Fazli Hameed, Saeed Ahmed, Rafi Ullah, Muhammad Shahab, and Fazli Subhan
- Abstract
The most extensively produced crop globally is Maize (Zea mays). Its response to diverse environmental stressors is dynamics and complicated, and it can be plastic (irreversible) or elastic (reversible). There is a wide range of soil and climatic conditions in which Maize can be grown. Climate change, for example, has the potential to impair grain quality and productivity of Maize all over the world. For the best harvest yield, the maize crop requires the right temperature. As a result of climate change, environmental stress factors such as abiotic and biotic stress factors are projected to intensify and become more common. Abiotic stress such as drought, temperature, and salinity are the major constraints limiting Maize’s worldwide production (Z. mays L.). In places prone to various stresses, the development of stress-tolerant crop types will be useful. Drought, salinity, and temperature extremes are examples of abiotic factors that can significantly impact the development and growth of the plant. Furthermore, various management options available may aid in the development of strategies for better maize performance in abiotic stress conditions to understand the maize response to resistance mechanisms and abiotic stress. Therefore, this chapter will focus on the impact of abiotic stress regarding temperature on Maize.
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- 2022
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27. Prediction of Gender-Biased Perceptions of Learners and Teachers Using Machine Learning
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Ghazala Kausar, Sajid Saleem, Fazli Subhan, Mazliham Mohd Suud, Mansoor Alam, and M. Irfan Uddin
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Renewable Energy, Sustainability and the Environment ,gender bias ,text books ,perceptions ,artificial intelligence ,machine learning ,Geography, Planning and Development ,Building and Construction ,Management, Monitoring, Policy and Law - Abstract
Computers have enabled diverse and precise data processing and analysis for decades. Researchers of humanities and social sciences are increasingly adopting computational tools such as artificial intelligence (AI) and machine learning (ML) to analyse human behaviour in society by identifying patterns within data. In this regard, this paper presents the modelling of teachers and students’ perceptions regarding gender bias in text books through AI. The data was collected from 470 respondents through a questionnaire using five different themes. The data was analysed with support vector machines (SVM), decision trees (DT), random forest (RF) and artificial neural networks (ANN). The experimental results show that the prediction of perceptions regarding gender varies according to the theme and leads to the different performances of the AI techniques. However, it is observed that when data from all the themes are combined, the best results are obtained. The experimental results show that ANN, on average, demonstrates the best performance by achieving an accuracy of 87.2%, followed by RF and SVM, which demonstrate an accuracy of 84% and 80%, respectively. This paper is significant in modelling human behaviour in society through AI, which is a significant contribution to the field.
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- 2023
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28. Mechanism of Insecticide Resistance in Insects/Pests
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Muhammad Nazir Uddin, Wajid Ali Khan, Khaliq Ur Rahman, Muhammad Farooq, Muhammad Muhammad, Shahid Ali, Sajad Khan, Fazli Subhan, Ahsan Ali Khan, Abdul Sattar Shah, Fawad Aziz, and Muhammad Rizwan
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Target site ,Environmental Chemistry ,Biology ,Mechanism (sociology) ,General Environmental Science ,Cell biology - Published
- 2020
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29. Performance Evaluation Of Supervised Machine Learning Techniques For Efficient Detection Of Emotions From Online Content
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Muhammad Zubair Asghar, Fazli Subhan, Muhammad Imran, Fazal Masud Kundi, Adil khan, Shahboddin Shamshirband, Amir Mosavi, Annamaria R. Varkonyi Koczy, and Peter Csiba
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Biomaterials ,Mechanics of Materials ,Modeling and Simulation ,05 social sciences ,0202 electrical engineering, electronic engineering, information engineering ,050301 education ,020201 artificial intelligence & image processing ,02 engineering and technology ,Electrical and Electronic Engineering ,0503 education ,Computer Science Applications - Published
- 2020
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30. A Systematic Review on Clone Node Detection in Static Wireless Sensor Networks
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Wazir Zada Khan, Mamoun Alazab, Saqib Hakak, G. Thippa Reddy, Muhammad Numan, Fazli Subhan, Alireza Jolfaei, and Sajjad Haider
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General Computer Science ,Cloning (programming) ,Computer science ,business.industry ,Node (networking) ,Wireless sensor networks (WSNs) ,General Engineering ,020206 networking & telecommunications ,clone attack ,02 engineering and technology ,Replication (computing) ,systematic literature review (SLR) ,0202 electrical engineering, electronic engineering, information engineering ,020201 artificial intelligence & image processing ,General Materials Science ,Clone (computing) ,State (computer science) ,lcsh:Electrical engineering. Electronics. Nuclear engineering ,business ,Wireless sensor network ,lcsh:TK1-9971 ,clone attack detection schemes ,Computer network - Abstract
The recent state of the art innovations in technology enables the development of low-cost sensor nodes with processing and communication capabilities. The unique characteristics of these low-cost sensor nodes such as limited resources in terms of processing, memory, battery, and lack of tamper resistance hardware make them susceptible to clone node or node replication attack. The deployment of WSNs in the remote and harsh environment helps the adversary to capture the legitimate node and extract the stored credential information such as ID which can be easily re-programmed and replicated. Thus, the adversary would be able to control the whole network internally and carry out the same functions as that of the legitimate nodes. This is the main motivation of researchers to design enhanced detection protocols for clone attacks. Hence, in this paper, we have presented a systematic literature review of existing clone node detection schemes. We have also provided the theoretical and analytical survey of the existing centralized and distributed schemes for the detection of clone nodes in static WSNs with their drawbacks and challenges.
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- 2020
31. Towards a Low Complexity Scheme for Medical Images in Scalable Video Coding
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Iftikhar Ahmad, Muhammad Imran, Fazli Subhan, and Muhammad Shoaib
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General Computer Science ,Computational complexity theory ,Computer science ,scalable video coding ,General Engineering ,Macroblock ,medical imaging ,slice coding ,Scalable Video Coding ,low complexity ,Flexible Macroblock Ordering ,DICOM ,Computer engineering ,Medical imaging ,General Materials Science ,eHealth ,flexible macroblock ordering ,lcsh:Electrical engineering. Electronics. Nuclear engineering ,Performance improvement ,lcsh:TK1-9971 ,Coding (social sciences) - Abstract
Medical imaging has become of vital importance for diagnosing diseases and conducting noninvasive procedures. Advances in eHealth applications are challenged by the fact that Digital Imaging and Communications in Medicine (DICOM) requires high-resolution images, thereby increasing their size and the associated computational complexity, particularly when these images are communicated over IP and wireless networks. Therefore, medical research requires an efficient coding technique to achieve high-quality and low-complexity images with error-resilient features. In this study, we propose an improved coding scheme that exploits the content features of encoded videos with low complexity combined with flexible macroblock ordering for error resilience. We identify the homogeneous region in which the search for optimal macroblock modes is early terminated. For non-homogeneous regions, the integration of smaller blocks is employed only if the vector difference is less than the threshold. Results confirm that the proposed technique achieves a considerable performance improvement compared with existing schemes in terms of reducing the computational complexity without compromising the bit-rate and peak signal-to-noise ratio.
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- 2020
32. Development and Characterization of Yeast-Incorporated Antimicrobial Cellulose Biofilms for Edible Food Packaging Application
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Mazhar Ul-Islam, Abeer Ahmed Qaed Ahmed, Mohamed F. Awad, Omar Mohammad Atta, Fazli Subhan, Muhammad Wajid Ullah, Guang Yang, and Sehrish Manan
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Polymers and Plastics ,yeasts ,Organic chemistry ,02 engineering and technology ,glycerol ,Shelf life ,Saccharomyces ,Article ,chemistry.chemical_compound ,0404 agricultural biotechnology ,biocompatibility ,QD241-441 ,Glycerol ,medicine ,Food science ,Cellulose ,carboxymethyl cellulose ,antimicrobial activity ,biology ,bacterial cellulose ,04 agricultural and veterinary sciences ,General Chemistry ,021001 nanoscience & nanotechnology ,biology.organism_classification ,040401 food science ,Yeast ,Carboxymethyl cellulose ,Food packaging ,chemistry ,Bacterial cellulose ,edible film ,0210 nano-technology ,food packaging ,medicine.drug - Abstract
The unique properties and advantages of edible films over conventional food packaging have led the way to their extensive exploration in recent years. Moreover, the incorporation of bioactive components during their production has further enhanced the intrinsic features of packaging materials. This study was aimed to develop edible and bioactive food packaging films comprising yeast incorporated into bacterial cellulose (BC) in conjunction with carboxymethyl cellulose (CMC) and glycerol (Gly) to extend the shelf life of packaged food materials. First, yeast biomass and BC hydrogels were produced by Meyerozyma guilliermondii (MT502203.1) and Gluconacetobacter xylinus (ATCC53582), respectively, and then the films were developed ex situ by mixing 30 wt.% CMC, 30 wt.% Gly, 2 wt.% yeast dry biomass, and 2 wt.% BC slurry. FE-SEM observation showed the successful incorporation of Gly and yeast into the fibrous cellulose matrix. FTIR spectroscopy confirmed the development of composite films through chemical interaction between BC, CMC, Gly, and yeast. The developed BC/CMC/Gly/yeast composite films showed high water solubility (42.86%). The yeast-incorporated films showed antimicrobial activities against three microbial strains, including Escherichia coli, Pseudomonas aeruginosa, and Saccharomyces aureus, by producing clear inhibition zones of 16 mm, 10 mm, and 15 mm, respectively, after 24 h. Moreover, the films were non-toxic against NIH-3T3 fibroblast cells. Finally, the coating of oranges and tomatoes with BC/CMC/Gly/yeast composites enhanced the shelf life at different storage temperatures. The BC/CMC/Gly/yeast composite film-coated oranges and tomatoes demonstrated acceptable sensory features such as odor and color, not only at 6 °C but also at room temperature and further elevated temperatures at 30 °C and 40 °C for up to two weeks. The findings of this study indicate that the developed BC/CMC/Gly/yeast composite films could be used as edible packaging material with high nutritional value and distinctive properties related to the film component, which would provide protection to foods and extend their shelf life, and thus could find applications in the food industry.
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- 2021
33. Evaluation of antinociceptive activity of Ilex dipyrena Wall. in mice
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Wasim Sajjad, Abdul Nasir, Amjad Ali, Muhammad Faheem, Syed Wadood Ali Shah, Mohammad Shoaib, Mohammad Nisar, Mi-Jeong Ahn, Nausheen Nazir, Atif Ali Khan Khalil, Syed Muhammad Mukarram Shah, Fazli Subhan, and Saeed Ahmad
- Subjects
Narcotic Antagonists ,Analgesic ,Pain ,(+)-Naloxone ,Pharmacology ,Ilex ,Mouse models ,Bicuculline ,030226 pharmacology & pharmacy ,03 medical and health sciences ,Acetic acid ,chemistry.chemical_compound ,Other systems of medicine ,0302 clinical medicine ,Ilex dipyrena ,medicine ,Toxicity Tests, Acute ,Animals ,GABA-A Receptor Antagonists ,Hot plate test ,Analgesic effect ,Opioidergic ,Analgesics ,Mice, Inbred BALB C ,Chemistry ,Naloxone ,Plant Extracts ,Nociception ,Complementary and alternative medicine ,Mechanism of action ,030220 oncology & carcinogenesis ,Models, Animal ,GABAergic ,medicine.symptom ,RZ201-999 ,medicine.drug ,Research Article - Abstract
Background In order to find a new natural resource for pain-relief, the analgesic effects of Ilex dipyrena crude extract, fractions, and subfractions were evaluated in in-vivo mouse models with possible mechanism of action. Methods Analgesic effects of crude extract (100 and 200 mg/kg body weight), fractions and subfractions (75 mg/kg body weight) were screened using heat-induced (tail-immersion and hot plate test) and chemical-induced (formalin and acetic acid) nociception models in mice. The samples were also tested for the elucidation of a possible mechanism through opioidergic and GABAergic systems. Results The administration of crude extract, fractions and subfractions produced analgesic responses in acetic acid, formalin, tail immersion, and hot plate model for pain similar to those obtained with the standard. Naloxone antagonized the antinociceptive effects of the tested samples, whereas bicuculline showed partial inhibition. Considering the analgesic response, crude extract, fractions, and subfractions demonstrated promising inhibitory activity against all test models for pain, which was further supported by the possible involvement of opioidergic and GABAergic systems. Conclusion The results suggest that this plant may be useful in the development of new analgesic drugs. Further research with regard to the isolation of bioactive compounds is required to verify these findings.
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- 2021
34. Inter-agency collaboration and disaster management: A case study of the 2005 earthquake disaster in Pakistan
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Ikram Shah, Tahir Mahmood, Sajjad A. Khan, Noor Elahi, Muhammad Shahnawaz, Adnan A. Dogar, Fazli Subhan, and Khoula Begum
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inter-agency collaboration ,pakistan ,HD61 ,erra ,disaster ,2005 earthquake ,ERRA ,disaster management ,Risk in industry. Risk management ,Pakistan ,Management, Monitoring, Policy and Law ,Safety Research - Abstract
In post disastrous situations, coordinated and integrated interventions aimed at relief and rehabilitation not only help facilitate reaching out to the affected communities in a timely fashion but also pave the way to channel scarce and valued resources towards end users in an efficient and effective manner. This article attempts to trace the origins and gradual development of ‘inter-agency collaboration’ and the implications thereof for disaster management strategies in Pakistan through an analysis of relief and rehabilitation interventions undertaken by the Government of Pakistan in collaboration with local and international Non-governmental Organisations (NGOs) and relief agencies in the ex post of the 2005 earthquake. Data for this study were collected through structured and semi-structured interviews from government officials, representatives of NGOs and relief agencies and ordinary women and men in the earthquake stricken localities of Balakot and Mansehra districts of Pakistan. On the heels of the 2005 earthquake, both local NGOs and faith-based organisations in concert with international NGOs and relief agencies from around the world rushed to assist Pakistan in it’s rescue and relief operations at a time when the country was faced with the twin dilemma of both the non-existence of peculiar institutional arrangements for disaster management and a lack of the necessary technical and financial resources. The aftermath of the 2005 earthquake offered opportunity to the Government of Pakistan and the NGOs and relief agencies alike to transform their individual interventions into a robust and organised ‘inter-agency collaboration’, which was later on realised in the form of establishment of a national disaster management organisation called the ‘Earthquake Reconstruction and Rehabilitation Authority (ERRA)’. The establishment of ERRA not only paved the way for avoiding duplication and wastage of resources but also ensued in reaching out to the affected communities in a timely fashion. The Pakistani case offers implications in terms of highlighting the salience of establishing ‘inter-agency collaboration’ in other settings.
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- 2021
35. Cuckoo Search-based SVM (CS-SVM) Model for Real-Time Indoor Position Estimation in IoT Networks
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M. Irfan Uddin, Abdullah Khan, Asfandyar Khan, Atif Khan, Fazli Subhan, Javed Iqbal Bangash, Marwan Mahmoud, and Amjad Khan
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Science (General) ,Article Subject ,Computer Networks and Communications ,Computer science ,Fingerprint (computing) ,Normalization (image processing) ,020206 networking & telecommunications ,02 engineering and technology ,Object (computer science) ,computer.software_genre ,Maxima and minima ,Support vector machine ,Q1-390 ,Position (vector) ,0202 electrical engineering, electronic engineering, information engineering ,T1-995 ,020201 artificial intelligence & image processing ,Data mining ,Cuckoo search ,MATLAB ,computer ,Technology (General) ,Information Systems ,computer.programming_language - Abstract
Internet of Things (IoT), an emerging technology, is becoming an essential part of today’s world. Machine learning (ML) algorithms play an important role in various applications of IoT. For decades, the location information has been extremely useful for humans to navigate both in outdoor and indoor environments. Wi-Fi access point-based indoor positioning systems get more popularity, as it avoids extra calibration expenses. The fingerprinting technique is preferred in an indoor environment as it does not require a signal’s Line of Sight (LoS). It consists of two phases: offline and online phase. In the offline phase, the Wi-Fi RSSI radio map of the site is stored in a database, and in the online phase, the object is localized using the offline database. To avoid the radio map construction which is expensive in terms of labor, time, and cost, machine learning techniques may be used. In this research work, we proposed a hybrid technique using Cuckoo Search-based Support Vector Machine (CS-SVM) for real-time position estimation. Cuckoo search is a nature-inspired optimization algorithm, which solves the problem of slow convergence rate and local minima of other similar algorithms. Wi-Fi RSSI fingerprint dataset of UCI repository having seven classes is used for simulation purposes. The dataset is preprocessed by min-max normalization to increase accuracy and reduce computational speed. The proposed model is simulated using MATLAB and evaluated in terms of accuracy, precision, and recall with K-nearest neighbor (KNN) and support vector machine (SVM). Moreover, the simulation results show that the proposed model achieves high accuracy of 99.87%.
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- 2021
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36. Linear Discriminant Analysis-Based Dynamic Indoor Localization Using Bluetooth Low Energy (BLE)
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Haseeb Bari, Fazli Subhan, Sajid Saleem, Shafiq Ahmad, Ahmed M. El-Sherbeeny, Saqib Hakak, and Wazir Zada Khan
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Computer science ,LDA ,Geography, Planning and Development ,Real-time computing ,KNN ,Mobile computing ,Decision tree ,TJ807-830 ,02 engineering and technology ,Management, Monitoring, Policy and Law ,TD194-195 ,localization ,Renewable energy sources ,law.invention ,Bluetooth ,Naive Bayes classifier ,0203 mechanical engineering ,law ,0202 electrical engineering, electronic engineering, information engineering ,Wireless ,GE1-350 ,Environmental effects of industries and plants ,Renewable Energy, Sustainability and the Environment ,business.industry ,020302 automobile design & engineering ,020206 networking & telecommunications ,Object (computer science) ,Linear discriminant analysis ,Support vector machine ,received signal strength indicator ,Environmental sciences ,business - Abstract
Due to recent advances in wireless gadgets and mobile computing, the location-based services have attracted the attention of computing and telecommunication industries to launch location-based fast and accurate localization systems for tracking, monitoring and navigation. Traditional lateration-based techniques have limitations, such as localization error, and modeling of distance estimates from received signals. Fingerprinting based tracking solutions are also environment dependent. On the other side, machine learning-based techniques are currently attracting industries for developing tracking applications. In this paper we have modeled a machine learning method known as Linear Discriminant Analysis (LDA) for real time dynamic object localization. The experimental results are based on real time trajectories, which validated the effectiveness of our proposed system in terms of accuracy compared to naive Bayes, k-nearest neighbors, a support vector machine and a decision tree.
- Published
- 2020
37. Impact of Node Deployment and Routing for Protection of Critical Infrastructures
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Muhammad Shoaib, Madiha Noreen, Asfandyar Khan, Fazli Subhan, Moeenuddin Tariq, and Muhammad Imran
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Routing protocol ,General Computer Science ,Computer science ,Node (networking) ,Distributed computing ,Linear wireless sensor networks ,General Engineering ,node placement ,Network topology ,Grid ,Software deployment ,General Materials Science ,lcsh:Electrical engineering. Electronics. Nuclear engineering ,Routing (electronic design automation) ,performance analysis ,Cluster analysis ,Wireless sensor network ,lcsh:TK1-9971 ,energy efficiency ,clustering ,network lifetime - Abstract
Recently, linear wireless sensor networks (LWSNs) have been eliciting increasing attention because of their suitability for applications such as the protection of critical infrastructures. Most of these applications require LWSN to remain operational for a longer period. However, the non-replenishable limited battery power of sensor nodes does not allow them to meet these expectations. Therefore, a shorter network lifetime is one of the most prominent barriers in large-scale deployment of LWSN. Unlike most existing studies, in this paper, we analyze the impact of node placement and clustering on LWSN network lifetime. First, we categorize and classify existing node placement and clustering schemes for LWSN and introduce various topologies for disparate applications. Then, we highlight the peculiarities of LWSN applications and discuss their unique characteristics. Several application domains of LWSN are described. We present three node placement strategies (i.e., linear sequential, linear parallel, and grid) and various deployment methods such as random, uniform, decreasing distance, and triangular. Extensive simulation experiments are conducted to analyze the performance of the three state-of-the-art routing protocols in the context of node deployment strategies and methods. The experimental results demonstrate that the node deployment strategies and methods significantly affect LWSN lifetime.
- Published
- 2019
38. Impact of plant growth-promoting rhizobacteria on yield and disease control of Nicotiana tabacum
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Sohail Ahmad Khan, Ibrar Khan, Fazli Subhan, Kashif Syed Haleem, Isfahan Tauseef, Muhammad Nasir Khan Khattak, and Tariq Sultan
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0106 biological sciences ,plant protection ,Siderophore ,phytopathogens ,Nicotiana tabacum ,Hydrogen cyanide ,Rhizobacteria ,tobacco ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,soil ,Crop ,chemistry.chemical_compound ,Auxin ,010608 biotechnology ,Fusarium oxysporum ,rhizobacteria ,lcsh:QH301-705.5 ,chemistry.chemical_classification ,biology ,fungi ,food and beverages ,04 agricultural and veterinary sciences ,biology.organism_classification ,Fungicide ,Horticulture ,lcsh:Biology (General) ,chemistry ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,General Agricultural and Biological Sciences - Abstract
Paper description: The manuscript demonstrates the first isolation and characterization of PGPR associated with the Nicotiana tabacum root soil system from an unexplored and isolated area of Pakistan. The findings demonstrate that the indigenous microbial community of this region possess a strong potential to enhance the growth and yield of tobacco crop through enhancement of nutrients uptake and antifungal activity. These finding have a significant and sustainable impact in terms of reduction of application of chemical fertilizers/fungicides and enhancement of growth and yield of crop. A bstract: An unexplored soil microbial community associated with the root system of Nicotiana tabacum was isolated to analyze its impact on growth and yield of the crop. A total of nine isolates out of 180 were biochemically screened and characterized as potential plant growth-promoting rhizobacteria due to the expression of growth-promoting traits. All isolates were positive for ammonia production, 8 were positive for phosphate solubilization but none for auxin production. The majority of the isolates were also found positive for hydrogen cyanide, siderophore and hydrolytic/degradative enzymes production, enabling them to restrict the growth of Fusarium oxysporum in an in vitro assay. Although all tested isolates enhanced tobacco growth significantly, Baj-ER-01 and CD-RS-03 were found to be the most promising in enhancing all aspects of growth. This study provides evidence for the enhancement of growth and yield of inoculated tobacco plants through an adequate supply of nutrients and/or controlling phytopathogens. https://doi.org/10.2298/ABS180315035K Received: March 15, 2018; Revised: July 22, 2018; Accepted: July 26, 2018; Published online: August 9, 2018 How to cite this article: Khan S, Subhan F, Haleem KS, Khattak MNK, Khan I, Sultan T, Tauseef I. Impact of plant growth-promoting rhizobacteria on yield and disease control of Nicotiana tabacum . Arch Biol Sci. 2018;70(4):717-25.
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- 2018
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39. Hybrid Indoor Position Estimation using K-NN and MinMax
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Sajjad Haider, Asfandyar Khan, Shakeel Ahmed, Salman Ahmed, Muhammad Numan, Fazli Subhan, and Sajid Saleem
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Estimation ,Computer Networks and Communications ,business.industry ,Computer science ,Position (vector) ,Global Positioning System ,business ,Minimax ,Algorithm ,Trilateration ,Information Systems - Published
- 2019
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40. Performance Evaluation of Supervised Machine Learning Techniques for Efficient Detection of Emotions from Online Content
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Muhammad A. Imran, Peter Csiba, Muhammad Zubair Asghar, Fazal Masud Kundi, Shahaboddin Shamshirband, Annamária R. Várkonyi-Kóczy, Fazli Subhan, and Amir Mosavi
- Subjects
FOS: Computer and information sciences ,Computer Science - Machine Learning ,Computer Science - Computation and Language ,Recall ,business.industry ,Computer science ,Emotion classification ,Emotion detection ,Sentiment analysis ,68T01 ,Machine learning ,computer.software_genre ,Online community ,Machine Learning (cs.LG) ,Computer Science - Information Retrieval ,Classifier (linguistics) ,Benchmark (computing) ,artificial_intelligence_robotics ,Artificial intelligence ,business ,computer ,Computation and Language (cs.CL) ,Information Retrieval (cs.IR) - Abstract
Emotion detection from the text is an important and challenging problem in text analytics. The opinion-mining experts are focusing on the development of emotion detection applications as they have received considerable attention of online community including users and business organization for collecting and interpreting public emotions. However, most of the existing works on emotion detection used less efficient machine learning classifiers with limited datasets, resulting in performance degradation. To overcome this issue, this work aims at the evaluation of the performance of different machine learning classifiers on a benchmark emotion dataset. The experimental results show the performance of different machine learning classifiers in terms of different evaluation metrics like precision, recall ad f-measure. Finally, a classifier with the best performance is recommended for the emotion classification., 30 pages, 13 tables, 1 figure
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- 2019
41. Fish Scale Collagen Peptides Protect against CoCl2/TNF-α-Induced Cytotoxicity and Inflammation via Inhibition of ROS, MAPK, and NF-κB Pathways in HaCaT Cells
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Young Hun Jeong, Songwan Jin, Yeseon Lim, Sun-Yong Baek, Hae Yeong Kang, Muhammad Ikram, Fazli Subhan, Jong Young Kwak, and Sik Yoon
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0301 basic medicine ,MAPK/ERK pathway ,Aging ,Article Subject ,lcsh:Cytology ,p38 mitogen-activated protein kinases ,NF-κB ,Inflammation ,Cell Biology ,General Medicine ,Biology ,Biochemistry ,Proinflammatory cytokine ,Cell biology ,03 medical and health sciences ,chemistry.chemical_compound ,HaCaT ,030104 developmental biology ,medicine.anatomical_structure ,chemistry ,medicine ,Viability assay ,lcsh:QH573-671 ,medicine.symptom ,Keratinocyte - Abstract
Skin diseases associated with inflammation or oxidative stress represent the most common problem in dermatology. The present study demonstrates that fish scale collagen peptides (FSCP) protect against CoCl2-induced cytotoxicity and TNF-α-induced inflammatory responses in human HaCaT keratinocyte cells. Our study is the first to report that FSCP increase cell viability and ameliorate oxidative injury in HaCaT cells through mechanisms mediated by the downregulation of key proinflammatory cytokines, namely, TNF-α, IL-1β, IL-8, and iNOS. FSCP also prevent cell apoptosis by repressing Bax expression, caspase-3 activity, and cytochrome c release and by upregulating Bcl-2 protein levels in CoCl2- or TNF-α-stimulated HaCaT cells. In addition, the inhibitory effects of FSCP on cytotoxicity and the induction of proinflammatory cytokine expression were found to be associated with suppression of the ROS, MAPK (p38/MAPK, ERK, and JNK), and NF-κB signaling pathways. Taken together, our data suggest that FSCP are useful as immunomodulatory agents in inflammatory or immune-mediated skin diseases. Furthermore, our results provide new insights into the potential therapeutic use of FSCP in the prevention and treatment of various oxidative- or inflammatory stress-related inflammation and injuries.
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- 2017
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42. An Offline Signature Verification Technique Using Pixels Intensity Levels
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Asadullah Shah, Fazli Subhan, Muhammad Najam Khan, Muhammad Fayaz, and Abdul Salam Shah
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021110 strategic, defence & security studies ,Biometrics ,Computer science ,business.industry ,0211 other engineering and technologies ,Decision tree ,020207 software engineering ,Pattern recognition ,02 engineering and technology ,computer.software_genre ,Signature (logic) ,Credit card ,Tree (data structure) ,Naive Bayes classifier ,ComputingMethodologies_PATTERNRECOGNITION ,C4.5 algorithm ,Signal Processing ,0202 electrical engineering, electronic engineering, information engineering ,Data mining ,Artificial intelligence ,business ,computer ,Signature recognition - Abstract
Offline signature recognition has great importance in our day to day activities. Researchers are trying to use them as biometric identification in various areas like banks, security systems and for other identification purposes. Fingerprints, iris, thumb impression and face detection based biometrics are successfully used for identification of individuals because of their static nature. However, people’s signatures show variability that makes it difficult to recognize the original signatures correctly and to use them as biometrics. The handwritten signatures have importance in banks for cheque, credit card processing, legal and financial transactions, and the signatures are the main target of fraudulence. To deal with complex signatures, there should be a robust signature verification method in places such as banks that can correctly classify the signatures into genuine or forgery to avoid financial frauds. This paper, presents a pixels intensity level based offline signature verification model for the correct classification of signatures. To achieve the target, three statistical classifiers; Decision Tree (J48), probability based Naive Bayes (NB tree) and Euclidean distance based k-Nearest Neighbor (IBk), are used. For comparison of the accuracy rates of offline signatures with online signatures, three classifiers were applied on online signature database and achieved a 99.90% accuracy rate with decision tree (J48), 99.82% with Naive Bayes Tree and 98.11% with K-Nearest Neighbor (with 10 fold cross validation). The results of offline signatures were 64.97% accuracy rate with decision tree (J48), 76.16% with Naive Bayes Tree and 91.91% with k-Nearest Neighbor (IBk) (without forgeries). The accuracy rate dropped with the inclusion of forgery signatures as, 55.63% accuracy rate with decision tree (J48), 67.02% with Naive Bayes Tree and 88.12% (with forgeries).
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- 2016
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43. Curcumin: From Ancient Spice to Modern Anti-Viral Drug in COVID-19 Pandemic
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Isfahan Tauseef, Adnan Haider, Muhammad Zeeshan, Fazli Subhan, Atif Ali Khan Khalil, Ahmed Saadi Ibrahim, and Syed Kashif Haleem
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0301 basic medicine ,MAPK/ERK pathway ,Drug ,business.industry ,media_common.quotation_subject ,Wnt signaling pathway ,Cancer ,Inflammation ,Pharmacology ,medicine.disease ,030226 pharmacology & pharmacy ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,0302 clinical medicine ,chemistry ,medicine ,Curcumin ,Viral disease ,medicine.symptom ,Signal transduction ,business ,media_common - Abstract
A viral disease such as COVID-19 (Corona Virus Disease-2019) is a major health problem and worsens the complications of various diseases including cardiovascular diseases, hypertension, diabetes, and cancers. The current study summarises the therapeutic progress and efficacy of curcumin for the cure and prevention of severe acute respiratory syndrome (SARS) and SARS-related COVID-19. Curcumin is extracted from the herb Curcuma longa L., known for its various therapeutic functions such as anti-inflammatory, anti-obesity and anti- cancer activities. Very little is known about its therapeutic importance for the prevention and treatment of COVID-19 infections and complications. Curcumin has the ability to interact with spike protein or ACE2 protein in COVID-19-induced signal transduction pathway. Curcumin also suppresses several important signaling pathways in viral infection such as the well-known transcription factors including NF-kB, STAT-3, Wnt/β-catenin, Nrf2, p38/MAPK. Curcumin inhibit virus-induced inflammation by modulating the manifestation of various factors such as IL-10, IL-8, IL-6, TNF-α/β, and COX-2 in COVID-19 diseases. The modulation of multiple molecular targets by treatment with curcumin and anti-inflammatory effects of curcumin make it an ideal candidate phytochemical for the treatment of SARS and SARS-related COVID-19.
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- 2020
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44. The Pathophysiology of Repurposed Antiviral Drugs for treatment of COVID-19 Infection
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Raees Khan, Muhammad Naeem, Fazli Subhan, Adnan Haider, Muhammad Faheem, Atif Ali Khan Khalil, and Sayed Babar Jamal
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biology ,business.industry ,viruses ,RNA virus ,medicine.disease_cause ,biology.organism_classification ,Virology ,Pathophysiology ,Virus ,Review article ,Novel virus ,Pandemic ,Medicine ,business ,Repurposing ,Coronavirus - Abstract
Our planet earth has seen many viral pandemics The most recent pandemic was Severe Acute Respiratory Syndrome (SARS-CoV-2) commonly called Corona Virus disease (COVID-19). It was first reported inWuhan Peoples Republic of China, in December 2019. COVID-19 is a positive-sense single-strand enveloped RNA virus mainly found in mammals. To date, a total of six species of coronavirus have been reported that affected humans. These mainly cause respiratory, hepatic, enteric, and neurological complications. Since it is a novel virus, different therapies were used for the treatment These measures comprised of mostly repurposing of already available drugs, more specifically antiviral drugs. In this review article, we have summarized the virus- host relation and chemical structure and also discussed in detail the proposed mechanism of these repurposed antivirals drugs.
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- 2020
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45. Three-dimensionally microporous and highly biocompatible bacterial cellulose–gelatin composite scaffolds for tissue engineering applications
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Muhammad Wajid Ullah, Sik Yoon, Muhammad Israr, Mazhar Ul-Islam, Jae Hyun Jang, Yeji Kim, Fazli Subhan, Shaukat Khan, Muhammad Ikram, and Joong Kon Park
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Materials science ,food.ingredient ,General Chemical Engineering ,Composite number ,Nanotechnology ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Gelatin ,law.invention ,chemistry.chemical_compound ,food ,Tissue engineering ,Confocal microscopy ,law ,medicine ,Fourier transform infrared spectroscopy ,General Chemistry ,Microporous material ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Chemical engineering ,chemistry ,Bacterial cellulose ,Swelling ,medicine.symptom ,0210 nano-technology - Abstract
In the current study, highly porous and biocompatible regenerated bacterial cellulose–gelatin (rBC–G) composite scaffolds were fabricated for tissue engineering applications. The scaffolds were prepared from porogen added composite solution of BC–G using a casting and leaching approach. The structural characterization of the scaffolds was carried out through field emission scanning electron microscopy (FE-SEM), Fourier transform infrared spectroscopy (FT-IR), and X-ray photoelectron spectroscopy (XPS). FE-SEM images showed the presence and interconnectivity of pores, while FT-IR and XPS spectra confirmed the composite chemistry of the scaffolds. The observed high porosity and rapid swelling of the scaffolds ensure their nutrient exchange ability during practical applications. In vitro biological tests showed that animal fibroblast cells (NIH 3T3) adhered to and proliferated well on the rBC–G composite scaffolds. Cell penetration assessed by Confocal microscopy indicated up to 200 μm infiltration after 7 days of incubation, suggesting the suitability of the scaffolds for three-dimensional cell culture. The enhanced expression of metalloproteases (MMPs) showed that prolonged cell incubation can lead to extracellular matrix (ECM) production inside the 3D rBC–G scaffolds. These results demonstrated that our 3D rBC–G composite scaffolds are candidates for future biomedical applications, including tissue regeneration.
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- 2016
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46. Alginate–marine collagen–agarose composite hydrogels as matrices for biomimetic 3D cell spheroid formation
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Young Hun Jeong, Y.J. Na, Su-Il Shin, Yeseon Lim, Muhammad Ikram, Hae Yeong Kang, Fazli Subhan, Jong-Young Kwak, Rira Lee, Songwan Jin, and Sik Yoon
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0301 basic medicine ,Biocompatibility ,Chemistry ,Cell growth ,General Chemical Engineering ,technology, industry, and agriculture ,Biomaterial ,Nanotechnology ,macromolecular substances ,02 engineering and technology ,General Chemistry ,021001 nanoscience & nanotechnology ,law.invention ,03 medical and health sciences ,3D cell culture ,chemistry.chemical_compound ,030104 developmental biology ,Cell culture ,Confocal microscopy ,law ,Self-healing hydrogels ,Biophysics ,Agarose ,0210 nano-technology - Abstract
Hydrogels are prototypical matrices for 3D cell culture, of which alginate hydrogels are extensively used. However, ionic crosslinking agents, such as Ca2+, are required to form alginate hydrogels, but introduce Ca2+-associated cytotoxicity and long-term stability issues. Collagen is a promising biomaterial for 3D cell culture scaffolds primarily due to its biocompatibility. In the present study, the authors designed and fabricated a calcium-free, physically crosslinked, efficient, and bioactive hydrogel composed of alginate, marine collagen, and agarose (AmCA) for use in 3D cell cultures. This AmCA hydrogel was assessed by FTIR, swelling property, scanning electron microscopy, phase contrast microscopy, cell proliferation, cell viability, confocal microscopy, transparency and RT-PCR analyses. The gel was found to exhibit excellent cytocompatibility with various tumor and non-tumor cells, to generate high yields of multicellular spheroids, and to promote cellular activity. Furthermore, the transparency of the AmCA hydrogel suggests it can be used without cell-tracking chemicals in morphological studies of cell cultures. Taken together, it would appear that the described physically crosslinked AmCA hydrogel could provide a novel platform for the development of customizable, transparent, biocompatible, functional, easy-to-produce, and cost-effective scaffolds for use in 3D cultures of various cell types.
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- 2016
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47. Prevalence of goiter and iodine status among 6-12 years school age children in district Kohat, Pakistan
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Muhammad Shahab, Fazli Subhan, Matiul Haq, Rehman Mehmood Khattak, Saira Saira, Muhammad Nasir Khan Khattak, and Muhammad Jahangir
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education.field_of_study ,Pediatrics ,medicine.medical_specialty ,Goiter ,School age child ,business.industry ,Population ,chemistry.chemical_element ,Disease cluster ,medicine.disease ,Iodine ,Iodine deficiency ,Iodised salt ,chemistry ,Environmental health ,Medicine ,Journal of Public Health ,education ,business - Abstract
Pakistan is considered to be one of the most severely iodine deficient countries in the region. A decade earlier, 70% of the population was estimated to be at risk of iodine deficiency. However, the recent use of iodized salt has reduced the intensity of the problem. Earlier studies regarding iodine deficiency in Pakistan were restricted to the northern mountainous regions, but have now been extended to the sub-Himalaya areas and the plains of Punjab. The aim of the present study was to investigate the prevalence of goiter and iodine status among school children in district Kohat, Pakistan. The 30 cluster approach was adopted for the study. From each cluster, 40 samples were collected from school going children. The palpation method was used to measure goiter grade, whereas, for urinary iodine estimation, the wet digestion method was used. The prevalence of goiter in the district was found to be 35% (37.16% in boys and 33% in girls). The median urinary iodine concentration was found to be 56±31.19?g/L. Estimation of iodine content in salt illustrated that 56.8% people were consuming non-iodized salt and 43.5% were using iodized salt. The current study suggests a severe iodine deficiency in school children of district Kohat and regular iodine supplementation is required on an instant basis.South East Asia Journal of Public Health Vol.4(2) 2014: 42-46
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- 2015
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48. Molecular characterization and expression analysis of mouse epidermal growth factor-like domain 8
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Sik Yoon, Heui-Soo Kim, Ik-Jin Song, Young-Tak Lim, Ja-Rang Lee, Fazli Subhan, Muhammad Ikram, and Da-Jeong Choi
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EGF Family of Proteins ,Protein Conformation ,Molecular Sequence Data ,Gene Expression ,Sequence alignment ,Thymus Gland ,Biology ,Cell Line ,Mice ,Open Reading Frames ,Protein structure ,Epidermal growth factor ,Gene expression ,Genetics ,Animals ,Humans ,Amino Acid Sequence ,Cloning, Molecular ,Gene ,Peptide sequence ,Cells, Cultured ,Phylogeny ,Base Sequence ,Calcium-Binding Proteins ,Alternative splicing ,Proteins ,General Medicine ,Molecular biology ,Transmembrane protein ,Mice, Inbred C57BL ,Alternative Splicing ,Sequence Alignment - Abstract
Epidermal growth factor (EGF)-like (EGFL) domain, a common structural module in numerous secreted or transmembrane proteins, is generally involved in protein-protein interactions. To date, several EGFL proteins have been identified and characterized, but little is known about EGFL domain 8 (EGFL8). The present study reported the molecular characterization and expression analysis of EGFL8 in mice. Mouse EGFL8 amplified using a reverse transcription-polymerase chain reaction approach was sequenced and characterized. Mouse EGFL8 encodes a protein of 293 amino acids with two EGFL domains, an Emilin-like domain and a Ca(2+)-binding EGFL domain, which has a molecular mass of 32 kDa. The coding sequence has a high degree of amino acid sequence identity across species, and the EGFL domain has been highly conserved in various species during evolutionary radiation. A phylogenetic tree calculated using the neighbor-joining method revealed that EGFL8 and EGFL7 are more closely associated with each other than either is to EGFL3, and they cluster with EGFL6. It was found that mouse EGFL8 protein was highly expressed in diverse mouse tissue types, including the thymus, lymph nodes, testis, ovaries, epididymis, ductus deferens, ileum, colon, stomach, esophagus, lung, uterus, urinary bladder, skin, spleen, adrenal glands and penis. These results are of great use in understanding the biological roles of mouse EGFL8 for further study.
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- 2015
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49. Engineered regenerated bacterial cellulose scaffolds for application in in vitro tissue regeneration
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Muhammad Ikram, Joong Kon Park, Yeji Kim, Fazli Subhan, Shaukat Khan, Muhammad Wajid Ullah, Mazhar Ul-Islam, Jae Hyun Jang, and Sik Yoon
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chemistry.chemical_compound ,Scaffold ,Tissue engineering ,chemistry ,Biochemistry ,Bacterial cellulose ,General Chemical Engineering ,Chemical structure ,ALIZARIN RED ,Alkaline phosphatase ,General Chemistry ,Cell adhesion ,In vitro - Abstract
In this study, we sought to synthesize regenerated bacterial cellulose (rBC) scaffolds for application in in vitro tissue regeneration. Bacterial cellulose (BC) was dissolved in N-methyl morpholine-N-oxide (NMMO), and salt crystals were added as porogens, followed by casting in molds and incubation in water. The synthesized scaffolds were characterized using Fourier transform infrared (FT-IR) spectroscopy and field-emission scanning electron microscopy (FE-SEM). The FT-IR spectra exhibited bands characteristic for BC in rBC scaffolds, indicating no alteration in chemical structure, while FE-SEM revealed a porous structure of the rBC scaffold. The scaffolds exhibited very high swelling ratio, indicating enhanced water absorption and nutrient exchange capacity. The in vitro biocompatibility of the rBC scaffolds was tested based on the adhesion, growth, and proliferation of animal fibroblasts (NIH 3T3), and the osteogenesis of animal osteoblasts (MC3T3-E1). Results indicated good cell adhesion, penetration, and proliferation. Alkaline phosphatase (ALP) activity and Alizarin red staining (ARS) revealed osteogenic differentiation of animal osteoblasts on the scaffolds. These results demonstrate that the rBC scaffolds are potential candidates for future tissue engineering applications.
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- 2015
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50. Isolation, identification, and pathological effects of beach sand bacterial extract on human skin keratinocytes
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Atta Ur Rehman, Sajid Mahmood, Kashif Syed Haleem, Raheem Shahzad, In-Jung Lee, Fazli Subhan, and Isfahan Tauseef
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0301 basic medicine ,Allergy and Clinical Immunology ,030106 microbiology ,lcsh:Medicine ,Human skin ,Marine Biology ,General Biochemistry, Genetics and Molecular Biology ,Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,Pathology ,Sequencing ,Viability assay ,Skin ,Growth medium ,biology ,Bacteria ,General Neuroscience ,lcsh:R ,fungi ,General Medicine ,16S ribosomal RNA ,biology.organism_classification ,Isolation (microbiology) ,Pseudomonas stutzeri ,HaCaT ,030104 developmental biology ,chemistry ,Public Health ,General Agricultural and Biological Sciences ,Beach sand ,human activities ,Biotechnology - Abstract
BackgroundBeaches are recreational spots for people. However, beach sand contains harmful microbes that affect human health, and there are no established methods for either sampling and identifying beach-borne pathogens or managing the quality of beach sand.MethodThis study was conducted with the aim of improving human safety at beaches and augmenting the quality of the beach experience. Beach sand was used as a resource to isolate bacteria due to its distinctive features and the biodiversity of the beach sand biota. A selected bacterial isolate termed FSRS was identified asPseudomonas stutzeriusing 16S rRNA sequencing and phylogenetic analysis, and the sequence was deposited in the NCBI GenBank database under the accession numberMF599548. The isolatedP. stutzeribacterium was cultured in Luria–Bertani growth medium, and a crude extract was prepared using ethyl acetate to examine the potential pathogenic effect ofP. stutzerion human skin. A human skin keratinocyte cell line (HaCaT) was used to assess cell adhesion, cell viability, and cell proliferation using a morphological analysis and a WST-1 assay.ResultThe crudeP. stutzeriextract inhibited cell adhesion and decreased cell viability in HaCaT cells. We concluded that the crude extract ofP. stutzeriFSRS had a strong pathological effect on human skin cells.DiscussionBeach visitors frequently get skin infections, but the exact cause of the infections is yet to be determined. The beach sand bacteriumP. stutzerimay, therefore, be responsible for some of the dermatological problems experienced by people visiting the beach.
- Published
- 2017
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