1,105 results on '"Flip"'
Search Results
2. LEAP-ASIA-2019 Numerical Simulations Using a Strain Space Multiple Mechanism Model for a Liquefiable Sloping Ground
- Author
-
Tanaka, Yoshikazu, Sahare, Anurag, Ueda, Kyohei, Yuyama, Waka, Iai, Susumu, Tobita, Tetsuo, editor, Ichii, Koji, editor, and Ueda, Kyohei, editor
- Published
- 2024
- Full Text
- View/download PDF
3. Exploring the role of FLIP and Itch in mechanisms of resistance to apoptosis
- Author
-
Holloway, James, Evergren Mills, Emma, and Longley, Daniel
- Subjects
Cell death ,Aapoptosis ,FLIP ,E3 Ligase - Abstract
A considerable number of cancers are inherently resistant to apoptosis demonstrating the need to develop novel strategies for combating this resistance. FLIP is the key negative regulator of the TRAIL-mediated apoptotic pathway and is frequently overexpressed in cancer. It elicits its anti-apoptotic function by preventing procaspase-8 homodimerization and auto-activation at the DISC. FLIP is a possible therapeutic target which has been difficult target due to structural similarities with procaspase-8. To progress the understanding of FLIP as a therapeutic targeted we investigated the regulation of FLIP through Itch-mediated ubiquitination and by disrupting its interaction with the pro-apoptotic FADD using newly developed inhibitors. Here we identify the E3 ubiquitin ligase Itch as a regulator of TRAIL sensitivity. OE33 Itch knockdown cells were more resistant to TRAIL-mediated apoptosis despite no observable change in the expression FLIP splice forms. We identified a novel role for Itch in regulating TRAIL-mediated apoptosis and chemotherapy. This study identified that levels of FLIP were a determining factor in mediating the induction of apoptosis in response to two novel FLIP inhibitors. These compounds induced procaspase-8 autoactivation which promoted downstream caspase signalling and induction of apoptosis. We observed that recruitment of FLIP to the death inducing signalling complex (DISC) at the plasma membrane was impaired by treatment with FLIP inhibitors thus facilitating the induction of apoptosis. Additionally, it identified that these inhibitors could enhance the activity of TRAIL in a FLIP-dependent manner in the HCT116 and U2OS cell lines. Procaspase-8 has a critical role in the function of these inhibitors. Its absence prevented DISC formation and induction of apoptosis in response to TRAIL. Knockout of its paralog, procaspase-10 was shown to enhance apoptotic signalling and DISC formation in response to izTRAIL and FLIP inhibition but could not compensate for the loss of procaspase-8. It was frequently observed that FLIP protein expression was negatively affected by the FLIP inhibitors. The expression of the anti-apoptotic protein MCL-1 was negatively affected by the FLIP inhibitors. Through two independent mechanisms this study demonstrated the importance of developing new approaches to overcome resistance to apoptosis in cancer. Further investigations are required to elucidate the resistance mechanisms governed by Itch and by FLIP in cancer cells. The FLIP inhibitors used in this study have promising in vitro effects which warrant further investigation in vivo.
- Published
- 2023
4. Esophageal Motility Disorders: Current Approach to Diagnostics and Therapeutics.
- Author
-
Vaezi, Michael, Patel, Dhyanesh, and Yadlapati, Rena
- Subjects
Absent Contractility ,Achalasia ,Barium Esophagram ,Distal Esophageal Spasm ,Esophageal Motility Disorders ,Esophagogastric Junction ,FLIP ,High-Resolution Manometry ,Hypercontractile Esophagus ,Ineffective Esophageal Motility ,Endoscopy ,Gastrointestinal ,Esophageal Achalasia ,Esophageal Motility Disorders ,Humans ,Manometry ,Quality of Life - Abstract
Dysphagia is a common symptom with significant impact on quality of life. Our diagnostic armamentarium was primarily limited to endoscopy and barium esophagram until the advent of manometric techniques in the 1970s, which provided the first reliable tool for assessment of esophageal motor function. Since that time, significant advances have been made over the last 3 decades in our understanding of various esophageal motility disorders due to improvement in diagnostics with high-resolution esophageal manometry. High-resolution esophageal manometry has improved the sensitivity for detecting achalasia and has also enhanced our understanding of spastic and hypomotility disorders of the esophageal body. In this review, we discuss the current approach to diagnosis and therapeutics of various esophageal motility disorders.
- Published
- 2022
5. Use of Fourier phase characteristics and effective stress analyses for post-earthquake ground motion estimation: application to ESG6 blind prediction steps 2&3 dataset and JMA accelerometric data
- Author
-
Atsushi Nozu
- Subjects
Site effect ,Fourier phase spectrum ,Soil nonlinearity ,Effective stress analysis ,FLIP ,Geography. Anthropology. Recreation ,Geodesy ,QB275-343 ,Geology ,QE1-996.5 - Abstract
Abstract After the occurrence of a large earthquake, engineering seismologists are often requested to estimate strong ground motions at a site where strong motion data were not obtained. The goal of this study was to test the ability of a class of methods that uses Fourier phase characteristics for the post-earthquake ground motion estimation, making use of the precious opportunity provide by the ESG6 Blind Prediction Steps 2&3. It was also part of the goal of this study to test the performance of the effective stress analyses to account for soil nonlinearity. In addition to the dataset provided by the organizer of the blind prediction, the author used additional accelerometric data from a nearby JMA site. To simulate ground motions for an M5.9 earthquake at the target site “KUMA”, the Fourier amplitude spectrum was estimated from the spectral ratio between KUMA and the nearby JMA site. The Fourier phase spectrum was approximated by the spectrum of another event at KUMA. Comparison between the estimated and recorded ground motions after the blind prediction revealed that the estimated ground motions were fairly consistent with the observed ground motions, indicating the effectiveness of the method when the rupture process of the target event is simple and the soil nonlinearity at the target site is not significant. To simulate ground motions at KUMA for the M6.5 foreshock and the M7.3 mainshock of the 2016 Kumamoto earthquake sequence, the author conducted effective stress analyses using a program called “FLIP” to account for soil nonlinearity. Comparison between the estimated and recorded ground motions after the blind prediction indicated that the low-frequency components were overestimated and the high-frequency components were underestimated. The strong soil nonlinearity considered in the effective stress analyses was the main cause of the discrepancy. One explanation for this result could be that the nonlinear soil behavior at KUMA during the foreshock and the mainshock was not a strong one. Another explanation could be that the effect of soil nonlinearity was already included in the records at JMA and the effect of soil nonlinearity was double counted in the results submitted by the author. Graphical Abstract
- Published
- 2023
- Full Text
- View/download PDF
6. Delineating mechanisms which underlie differential cell fates induced by p53 activation and HDAC inhibition in colorectal cancer
- Author
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Lees, Andrea, McDade, Simon, and Longley, Daniel
- Subjects
616.99 ,p53 ,Cell death ,Nutlin-3A ,Entinostat ,Apoptosis ,FLIP ,HDAC inhibitors - Abstract
The tumour suppressor p53 is the most frequently mutated gene in human cancer with loss or suppression of wild-type function thought to be a prerequisite for the development of most malignancies. In colorectal cancer (CRC), approximately 50% of tumours harbour mutations in the TP53 gene, whilst the remaining wild-type tumours suppress or circumvent p53 activation via non-mutational mechanisms. This includes dysregulation of the p14ARF/MDM2 axis which constitutes the major mechanism for inducing p53 stabilisation within the cell. Strategies aimed at reactivating latent wild-type p53 in such tumours therefore hold enormous clinical potential. This led to the development of small molecule inhibitors of the E3 ubiquitin ligase, MDM2, which normally targets p53 for degradation and disrupts its transcription factor activity. Blocking this negative MDM2-p53 interaction results in rapid stabilisation of p53 protein, however, this most often leads to the activation of p53-induced cell cycle arrest rather than cell death. Understanding the mechanisms which are responsible for this decision making process are therefore of great importance in order to utilise these compounds and augment the efficacy of other therapeutic agents that activate p53. Recent work in our lab has demonstrated that combination of direct (MDM2 inhibition) or indirect (DNA-damaging chemotherapy) p53 activation with inhibitors of nuclear Class-I Histone deacetylases (HDACi) is effective in enhancing p53- dependent apoptotic cell death in multiple models of CRC. Interestingly, despite a notable switch in phenotype from cell cycle arrest to cell death, few changes in the mRNA and protein expression of pro-apoptotic p53 targets were observed following combined treatment with the MDM2 inhibitor, Nutlin-3A, and the Class I specific HDACi, Entinostat, when compared to Nutlin-3A treatment alone. Indeed, the addition of Entinostat was instead found to decrease the expression of p53 induced anti-apoptotic proteins which most notably included the only known pseudo-caspase and cell death regulatory protein, FLIPL. The work presented in this thesis builds upon these previous observations and delves into the complex mechanisms and pathways responsible for the synergistic induction of cell death following combined MDM2- and HDAC-inhibition in p53 wild-type models of CRC. Using both functional genomics and molecular techniques, this work identifies FLIPL as a direct, p53-induced transcriptional target which is potently upregulated by Nutlin-3A and suppressed by Entinostat. Importantly, both pharmacological and mutational inhibition of the NFκB pathway reveal that the Nutlin-3A-induced upregulation of FLIPL occurs independently of its canonical regulation by NFκB, further supporting the p53-dependent nature of this response. Phenotypic analyses conducted by Annexin V/PI flow cytometry reveal that whilst treatment with Nutlin-3A or Entinostat alone fail to induce cell death, combining these agents significantly increases the induction of apoptotic cell death in a p53- dependent manner. In order to delineate the role of Entinostat mediated FLIPL downregulation in the cell death resulting from the combined Nutlin-3A/Entinostat treatment, siRNA-mediated FLIPL depletion was used to successfully phenocopy this result. Subsequently, further mechanistic analyses demonstrated that p53-mediated FLIPL upregulation blocks the induction of apoptosis by inhibiting caspase-8 activation at a TRAIL-R2/DR5 death inducing signalling complex. Notably, the activation of this p53-induced complex occurs independently of canonical TRAIL ligand binding. In addition to the early induction of caspase-8 dependent apoptotic cell death, this work reveals that depleting FLIPL in combination with p53 activation can also result in the induction of caspase-8 independent cell death at later timepoints. Herein, the p53 transcriptional target and caspase-8 paralog, caspase-10, is demonstrated to compensate for the loss of caspase-8 in order to induce apoptosis, albeit to a lesser extent than in caspase-8 proficient cells. Moreover, FLIPL is also revealed to modulate the expression of p53 transcriptional targets such that in the absence of both caspase-8 and -10 cell death can still proceed. Depleting FLIPL is shown to suppress the p53-induced expression of the cell-cycle inhibitor, p21, whilst simultaneously enhancing the p53-induced expression of the pro-apoptotic protein, PUMA. Indeed, this upregulation of PUMA significantly contributes to the cell death induced by FLIPL depletion and p53 activation at later timepoints. Thus, the results presented in this thesis identify novel, clinically-relevant biology in which FLIPL acts to determine cell fate following p53 activation. Therapeutically targeting FLIPL with Entinostat therefore represents a viable means of overcoming FLIPL-mediated resistance to MDM2-inhibitors in tumours retaining wild-type p53.
- Published
- 2021
7. Pre-clinical evaluation of inhibitors of apoptosis protein (IAP) antagonists in colorectal cancer
- Author
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Stott, Katie, Longley, Daniel, Hallsworth, John, and Bengoechea, Jose
- Subjects
616.99 ,Colorectal cancer ,Inhibitor of Apoptosis Proteins ,Fusobacterium nucleatum ,Entinostat ,FLIP ,Apoptosis - Abstract
Colorectal cancer (CRC) is a leading cause of cancer-related death and the third most common type of cancer worldwide. The five-year survival rate strongly correlates with the stage of the disease at initial diagnosis, falling from well over 90% at Stage I to less than 10% when diagnosed at Stage IV. Drug resistance is a major limitation to current treatment options for advanced CRC. Consequently, there is an unmet clinical need for novel therapeutic agents for treating patients with CRC in the advanced disease setting. CRC is frequently associated with a pro-inflammatory tumour microenvironment in which TNFα signalling plays an important role. Inhibitor of apoptosis proteins (IAPs) are capable of converting TNFα signalling from a pro-apoptotic to a pro-survival and pro-inflammatory signal. Overexpression of IAPs is associated with chemoresistance and poor prognosis in CRC. Consequently, IAPs are an attractive target for therapeutic intervention, and IAP antagonists, such as ASTX660, have recently been developed in order to exploit their pro-survival mechanisms. When TNFα binds to its receptor TNFR1 in the presence of an IAP antagonist, it leads to the formation of a cytoplasmic death-inducing complex consisting of RIPK1, FADD and procaspase-8. Procaspase-8 undergoes homodimerization within this complex and subsequently activates effector caspases-3 and -7 to promote apoptosis. FLIP, a pseudo-caspase, can also bind to FADD and inhibit homodimerization of procaspase-8, subsequently inhibiting apoptosis. In vitro results indicated that the CRC cell line models investigated herein harboured intrinsic resistance to IAP antagonist-mediated cell death, even in the presence of recombinant TNFα. Further investigation using siRNA-mediated silencing techniques, revealed FLIP is a major mediator of this resistance mechanism. Moreover, Entinostat, a clinically relevant Class I HDAC inhibitor, was found to downregulate FLIP expression and sensitise CRC cell line models to ASTX660. Through the use of procaspase-8 and procaspase-10 CRISPR-Cas9 knockout cell lines, the enhanced cell death observed was determined to be dependent on caspase-8, but not on its paralog, caspase-10. Furthermore, FLIP-mediated resistance, to ASTX660 and TNFα, was also overcome through the use of a novel small molecule FLIP inhibitor that targets the FLIP:FADD protein-protein interaction (PPI). Clinical approval of IAP antagonists is not only hampered by intrinsic resistance, but also by a lack of clinical biomarkers to stratify patients who would respond well to this treatment. Herein, the potential of using the presence of a Fusobacterium nucleatum infection as a predictive biomarker for clinical positioning of these agents was investigated. F. nucleatum infection was shown to promote an upregulation of CIAP2 and TNFα in pre-clinical models and this correlated with observations made in clinical samples. Interestingly, there was evidence to suggest that FLIP expression was downregulated by F. nucleatum infection. Importantly, co-culture of F. nucleatum infected monocytic cells significantly enhanced the efficacy of IAP antagonism in a manner dependent on bacterial induction of TNFα secretion in the immune cells. Collectively, this work suggests that the presence of F. nucleatum bacteria in colorectal tumours promotes a tumour microenvironment rich in TNFα levels and may 'prime' tumours with elevated CIAP2 and lower FLIP expression to become sensitive to IAP antagonists. Overall, the work presented in this thesis indicates that IAP antagonists may be most effective in pro-inflammatory, TNFα-rich CRC, but only if combined with an agent capable of overcoming FLIP-mediated resistance. Furthermore, the data presented suggest that the presence of F. nucleatum has the potential to be utilised as a predictive biomarker to identify patients who would benefit from IAP antagonistic therapy.
- Published
- 2021
8. Development of novel antibody-targeted nanoparticle strategies for treatment of pancreatic cancer
- Author
-
Johnston, Michael, Longley, Daniel, and Scott, Christopher
- Subjects
Nanoparticles ,Nanomedicine ,FLIP ,Death Receptor 5 ,Camptothecin - Abstract
Despite major advancements in the treatment of many cancers, pancreatic cancer has one of the poorest survival rates of all, with a ten-year survival of less than 1%. One experimental clinical approach to treat pancreatic cancer had involved targeting an apoptosis pathway, the TNF-related apoptosisinducing ligand (TRAIL) receptor 2/ death receptor-5 (DR5) pathway using the monoclonal antibody conatumumab (AMG 655). However, the results of these clinical trials proved disappointing with no survival advantage being observed. Subsequent literature has suggested that this was most likely due to inadequate receptor clustering and consequent lack of tumour cell apoptosis. In view of this, this thesis attempted to address the lack of efficacy with conatumumab through developing a nanoparticle-based approach armed with an entrapped chemotherapeutic and driving receptor clustering by decorating the nanoparticles with conatumumab. The initial work in this thesis sought to test various nanoformulation approaches with the aim of characterising size and manufacturability, entrapment, ligand conjugation and in vitro efficacy. Initially, a formulation method was developed to generate nanoparticles of smaller size than traditionally formulated from the single emulsion method. A hybrid method combining salting out and single emulsion nanoparticle formulation techniques proved better than the single emulsion method in reducing particle diameter. However, with this method entrapment proved inadequate achieving only 1% efficiency. Entrapment of two established chemotherapy drugs was attempted including gemcitabine and camptothecin, and an experimental FLIP inhibitor 3642. Given its hydrophilic nature, a derivative of the double emulsion method was employed to entrap gemcitabine. But, while this showed in vitro efficacy, concerns regarding entrapment and ligand conjugation quantification precluded further development. A derivative of the single emulsion method was used to entrap 3642 and in vitro efficacy was achieved, this was not taken forward due to restrictions with freedom-to-operate and a lack of drug substance. The topoisomerase 1 inhibitor camptothecin was chosen as the payload of choice in the nanoparticle candidate going forward. Camptothecin had a number of advantages 1) it showed favourable entrapment using the single emulsion method given its hydrophobic nature, 2) it is fluorescent, meaning entrapment could be quantified with ease, 3) the much less potent topoisomerase 1 inhibitor, irinotecan is currently used in pancreatic cancer treatment as part of the FOLFIRINOX regimen. To improve antibody conjugation a novel N-hydroxysuccinamide endcapped polymer was employed to circumvent the need for in situ EDC functionalisation of carboxyl groups. This resulted in improved AMG 655 conjugation efficiency versus previously observed methods with fewer manufacturing steps required. In chapter 4 the functional potency of the nanoparticle was investigated using a number of pancreatic tumour cell lines. Initially the level of DR5 receptor expression was determined both by flow cytometry and by Western blot. Variable levels of DR5 expression were observed ranging from 15% in PANC1 to 75% in AsPC-1 cell lines. Conjugation of AMG 655 to the nanoparticle surface (in the absence of drug) rendered it capable of reducing cell viability in all 4 cell line models treated. Notably this reduction did not correlate with DR5 surface expression but was consistent with observations in the literature. The reduction of viability was promising and the addition camptothecin improved this potency. The combined effect of conjugated AMG 655 and entrapped camptothecin reduced cell viability in a synergistic manner. In Chapter 4 the role of inhibitors of apoptosis FLICE-inhibitory protein (FLIP) and inhibitor of apoptosis protein (XIAP) were explored. It was clear that camptothecin downregulated FLIP and XIAP in a dose dependent manner. To gauge whether this downregulation was a potential explanation for the synergy observed or an off-target effect, siRNA knockdown of FLIP splice forms and XIAP was employed to simulate the downregulation observed from camptothecin. This revealed that FLIP downregulation contributed significantly by enhancing the potency of conjugated AMG 655. Furthermore, CRISPR (clustered regularly interspaced short palindromic repeats) targeting of FADD (Fas Associated Via Death Domain) and caspase 8 revealed that the synergy observed using this formulation was DR5 pathway-dependent. Given the success of testing in vitro, in vivo efficacy of the formulation was next investigated. Initially, cell line xenografts of MIA PaCa-2 and PANC-1 were employed and the results revealed that, when injected intravenously, the formulation reached the tumour site in quantities sufficient to block tumour growth. Patient-derived xenograft (PDX) models were next explored as a means to more accurately simulate the pancreatic cancer environment as these models form stroma and have not been immortalised. Unfortunately, no efficacy was observed in either PDX model. This may be due to the stromal barrier, a lack of DR5 expression or slower PDX growth compared to the cell line xenograft - requiring an altered dosage regimen. Moreover, the lack of histology or access to tumour samples that could be analysed for drug infiltration or apoptotic markers prevented appropriate evaluation of these models. In summary, a lead nanoparticle candidate was developed exhibiting good manufacturability and cytotoxicity. The potent cytotoxicity observed was synergistic, associated with FLIP downregulation and was DR5 pathwaydependent. This formulation exhibited promising in vivo efficacy in cell line xenografts. Despite the lack of efficacy observed in the PDX models CPT DR5 NP has demonstrated potent cell kill and in vivo efficacy and given the lack of available therapeutic options in the clinic this formulation could be optimised for further evaluation in both in vitro and in vivo models.
- Published
- 2020
9. Use of Fourier phase characteristics and effective stress analyses for post-earthquake ground motion estimation: application to ESG6 blind prediction steps 2&3 dataset and JMA accelerometric data.
- Author
-
Nozu, Atsushi
- Subjects
- *
GROUND motion , *STRAINS & stresses (Mechanics) , *EARTHQUAKE resistant design , *EARTHQUAKES , *SEISMOLOGISTS , *FORECASTING - Abstract
After the occurrence of a large earthquake, engineering seismologists are often requested to estimate strong ground motions at a site where strong motion data were not obtained. The goal of this study was to test the ability of a class of methods that uses Fourier phase characteristics for the post-earthquake ground motion estimation, making use of the precious opportunity provide by the ESG6 Blind Prediction Steps 2&3. It was also part of the goal of this study to test the performance of the effective stress analyses to account for soil nonlinearity. In addition to the dataset provided by the organizer of the blind prediction, the author used additional accelerometric data from a nearby JMA site. To simulate ground motions for an M5.9 earthquake at the target site "KUMA", the Fourier amplitude spectrum was estimated from the spectral ratio between KUMA and the nearby JMA site. The Fourier phase spectrum was approximated by the spectrum of another event at KUMA. Comparison between the estimated and recorded ground motions after the blind prediction revealed that the estimated ground motions were fairly consistent with the observed ground motions, indicating the effectiveness of the method when the rupture process of the target event is simple and the soil nonlinearity at the target site is not significant. To simulate ground motions at KUMA for the M6.5 foreshock and the M7.3 mainshock of the 2016 Kumamoto earthquake sequence, the author conducted effective stress analyses using a program called "FLIP" to account for soil nonlinearity. Comparison between the estimated and recorded ground motions after the blind prediction indicated that the low-frequency components were overestimated and the high-frequency components were underestimated. The strong soil nonlinearity considered in the effective stress analyses was the main cause of the discrepancy. One explanation for this result could be that the nonlinear soil behavior at KUMA during the foreshock and the mainshock was not a strong one. Another explanation could be that the effect of soil nonlinearity was already included in the records at JMA and the effect of soil nonlinearity was double counted in the results submitted by the author. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
10. Affine particle in cell method for MAC grids and fluid simulation
- Author
-
Ding, Ounan, Shinar, Tamar, and Schroeder, Craig
- Subjects
APIC ,PIC ,FLIP ,MPM ,Hybrid Lagrangian/Eulerian ,Computational fluid dynamics ,Mathematical Sciences ,Physical Sciences ,Engineering ,Applied Mathematics - Published
- 2020
11. Design and Motion Planning of a Metamorphic Flipping Robot.
- Author
-
Guan, Yuntao, Zhuang, Zheming, Zhang, Chunsong, Tang, Zhao, Zhang, Ze, and Dai, Jian S.
- Subjects
ROBOT motion ,ROBOTS - Abstract
With the advantages of high flexibility, strong adaptability, etc., the legged robot can help humans to complete numerous complicated tasks. In this paper, a kind of reconfigurable legged robot with a flexible waist was proposed. Compared with the common robots with a rigid trunk, the proposed robot can twist its waist flexibly. Through analysis, it is found that the flexible waist can improve the trunk workspace, foot endpoints' workspace and static stability margin of the robot, and further enhance the motion performance of the robot. Meanwhile, by imitating the creatures in nature, the motion gait planning of the robot was provided. Additionally, the proposed robot has excellent reconfigurable characteristics, and can flexibly transform among three forms to adapt to different working environments and accomplish different tasks. Further, after capsizing, the robot can complete the motion of turning over more easily. In this paper, the reconfiguration posture and the motion of turning over of the robot were planned in detail, and finally verified by ADAMS simulation. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
12. Restoring TRAILR2/DR5-Mediated Activation of Apoptosis upon Endoplasmic Reticulum Stress as a Therapeutic Strategy in Cancer.
- Author
-
Mora-Molina, Rocío and López-Rivas, Abelardo
- Subjects
- *
CELLULAR control mechanisms , *ENDOPLASMIC reticulum , *CELL death , *UNFOLDED protein response , *CELL physiology , *TUMOR necrosis factors - Abstract
The uncontrolled proliferation of malignant cells in growing tumors results in the generation of different stressors in the tumor microenvironment, such as nutrient shortage, hypoxia and acidosis, among others, that disrupt endoplasmic reticulum (ER) homeostasis and may lead to ER stress. As a response to ER stress, both normal and tumor cells launch a set of signaling pathways known as the unfolded protein response (UPR) to restore ER proteostasis and maintain cell viability and function. However, under sustained ER stress, an apoptotic cell death process can be induced and this has been the subject of different review articles, although the role of the TRAIL-R2/DR5-activated extrinsic pathway of apoptosis has not yet been thoroughly summarized. In this Review, we provide an updated overview of the molecular mechanisms regulating cell fate decisions in tumor cells undergoing ER stress and discuss the role of the tumor necrosis factor (TNF)-related apoptosis-inducing ligand receptor 2 (TRAIL-R2/DR5) in the final outcome of UPR signaling. Particularly, we focus on the mechanisms controlling cellular FLICE-like inhibitory protein (FLIP) levels in tumor cells undergoing ER stress, which may represent a potential target for therapeutic intervention in cancer. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
13. Spatiotemporal Pattern Formation in a Discrete Toxic-Phytoplankton–Zooplankton Model with Cross-Diffusion and Weak Allee Effect.
- Author
-
Zhang, Feifan, Tian, Hao, Zhao, Hongfan, Zhang, Xinran, and Shi, Qiyu
- Subjects
- *
ALLEE effect , *BIFURCATION diagrams - Abstract
Phytoplankton patterns have been observed widely in aquatic systems. Although pattern formation has been investigated based on many PDEs, discrete models on aquatic systems can provide more complex dynamics. A discrete toxic-phytoplankton–zooplankton model is studied in this paper, with the consideration of Allee effect and cross-diffusion. Focusing on Allee effect coefficient, flip and Neimark–Sacker bifurcation analyses are carried out. And focusing on cross-diffusion coefficient, Turing bifurcation analyses are carried out. Parameter conditions and bifurcation diagram of these bifurcations are obtained correspondingly. Numerical simulations are then performed which are consistent with results of theoretical analysis. Irregular patterns can be formed by flip bifurcation. Spirals can be formed by Neimark–Sacker bifurcation. Spots and stripes can be formed by Turing bifurcation. When Turing and flip, or Turing and Neimark–Sacker bifurcations both occur, special patterns can be obtained. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
14. A quadri-fluorescence SARS-CoV-2 pseudovirus system for efficient antigenic characterization of multiple circulating variants.
- Author
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Chen J, Huang Z, Xiao J, Du S, Bu Q, Guo H, Ye J, Chen S, Gao J, Li Z, Lan M, Wang S, Zhang T, Zhang J, Wu Y, Zhang Y, Xia N, Yuan Q, and Cheng T
- Subjects
- Animals, Humans, Cricetinae, Spike Glycoprotein, Coronavirus immunology, Spike Glycoprotein, Coronavirus genetics, COVID-19 Vaccines immunology, COVID-19 Vaccines administration & dosage, Neutralization Tests methods, Fluorescence, HEK293 Cells, Antigens, Viral immunology, Antibodies, Monoclonal immunology, Mesocricetus, SARS-CoV-2 immunology, SARS-CoV-2 genetics, COVID-19 immunology, COVID-19 virology, Antibodies, Neutralizing immunology, Antibodies, Neutralizing blood, Antibodies, Viral blood, Antibodies, Viral immunology
- Abstract
The ongoing co-circulation of multiple severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strains necessitates advanced methods such as high-throughput multiplex pseudovirus systems for evaluating immune responses to different variants, crucial for developing updated vaccines and neutralizing antibodies (nAbs). We have developed a quadri-fluorescence (qFluo) pseudovirus platform by four fluorescent reporters with different spectra, allowing simultaneous measurement of the nAbs against four variants in a single test. qFluo shows high concordance with the classical single-reporter assay when testing monoclonal antibodies and human plasma. Utilizing qFluo, we assessed the immunogenicities of the spike of BA.5, BQ.1.1, XBB.1.5, and CH.1.1 in hamsters. An analysis of cross-neutralization against 51 variants demonstrated superior protective immunity from XBB.1.5, especially against prevalent strains such as "FLip" and JN.1, compared to BA.5. Our finding partially fills the knowledge gap concerning the immunogenic efficacy of the XBB.1.5 vaccine against current dominant variants, being instrumental in vaccine-strain decisions and insight into the evolutionary path of SARS-CoV-2., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2024 The Author(s). Published by Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
15. Esophageal Motility Disorders: Current Approach to Diagnostics and Therapeutics.
- Author
-
Patel, Dhyanesh A., Yadlapati, Rena, and Vaezi, Michael F.
- Abstract
Dysphagia is a common symptom with significant impact on quality of life. Our diagnostic armamentarium was primarily limited to endoscopy and barium esophagram until the advent of manometric techniques in the 1970s, which provided the first reliable tool for assessment of esophageal motor function. Since that time, significant advances have been made over the last 3 decades in our understanding of various esophageal motility disorders due to improvement in diagnostics with high-resolution esophageal manometry. High-resolution esophageal manometry has improved the sensitivity for detecting achalasia and has also enhanced our understanding of spastic and hypomotility disorders of the esophageal body. In this review, we discuss the current approach to diagnosis and therapeutics of various esophageal motility disorders. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
16. Some remarks on finiteness of extremal rays of divisorial type.
- Author
-
Yoshio FUJIMOTO
- Subjects
- *
FINITE, The , *ENDOMORPHISMS - Abstract
Let X be a normal Q-factorial projective variety with at most log canonical singularities. We shall give a sufficient condition for the existence of at most finitely many KX-negative extremal rays R(C NE(X) of divisorial type. As an application, we show that for a nonisomorphic surjective endomorphism f:X - X of a normal projective Q-factorial terminal 3-fold X with (X) > 0, a suitable power fk (k > 0) of f descends to a nonisomorphic surjective endomorphism g:Xmin - Xmin of a minimal model Xmin of X. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
17. Differential Fault Attack on Kreyvium & FLIP.
- Author
-
Roy, Dibyendu, Bathe, Bhagwan, and Maitra, Subhamoy
- Subjects
- *
STREAM ciphers , *FAULT location (Engineering) , *CIPHERS , *PORTABLE computers - Abstract
In this article, we propose key recovery attack on two stream ciphers: Kreyvium and FLIP $_{530}(42,128,360)$ 530 (42 , 128 , 360) using Differential Fault Attack (DFA) technique. These two ciphers are being used in Fully Homomorphic Encryption (FHE) due to their low error growth during keystream generation. Kreyvium is an NFSR-based stream cipher and FLIP is a permutation-based stream cipher. We first show that the complete state of the Kreyvium can be recovered by injecting 3 faults and considering 450 many keystream bits. In case of FLIP, we show that if there is a 1-bit fault in the state of the cipher then from 9000 normal and faulty keystream bits the state (i.e., the secret key) of the cipher can be recovered. For single bit fault, one will require to solve a system of equations for each 530 possible fault locations to recover the correct key of FLIP. To the best of our knowledge, this is the first article which analyzes the security of these two FHE supported stream ciphers under DFA and it has been observed that DFA completely reveals the secret keys of these two ciphers with very minimal faults. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
18. A new perspective of triptolide-associated hepatotoxicity: the relevance of NF-κB and NF-κB-mediated cellular FLICE-inhibitory protein
- Author
-
Ziqiao Yuan, Zihang Yuan, Muhammad Hasnat, Haoran Zhang, Peishi Liang, Lixin Sun, Zhenzhou Jiang, and Luyong Zhang
- Subjects
Triptolide ,LPS ,TNF-α ,NF-κB ,FLIP ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Previously, we proposed a new perspective of triptolide (TP)-associated hepatotoxicity: liver hypersensitivity upon lipopolysaccharide (LPS) stimulation. However, the mechanisms for TP/LPS-induced hepatotoxicity remained elusive. The present study aimed to clarify the role of LPS in TP/LPS-induced hepatotoxicity and the mechanism by which TP induces liver hypersensitivity upon LPS stimulation. TNF-α inhibitor, etanercept, was injected intraperitoneally into mice to investigate whether induction of TNF-α by LPS participated in the liver injury induced by TP/LPS co-treatment. Mice and hepatocytes pretreated with TP were stimulated with recombinant TNF-α to assess the function of TNF-α in TP/LPS co-treatment. Additionally, time-dependent NF-κB activation and NF-κB-mediated pro-survival signals were measured in vivo and in vitro. Finally, overexpression of cellular FLICE-inhibitory protein (FLIP), the most potent NF-κB-mediated pro-survival protein, was measured in vivo and in vitro to assess its function in TP/LPS-induced hepatotoxicity. Etanercept counteracted the toxic reactions induced by TP/LPS. TP-treatment sensitized mice and hepatocytes to TNF-α, revealing the role of TNF-α in TP/LPS-induced hepatotoxicity. Mechanistic studies revealed that TP inhibited NF-κB dependent pro-survival signals, especially FLIP, induced by LPS/TNF-α. Moreover, overexpression of FLIP alleviated TP/LPS-induced hepatotoxicity in vivo and TP/TNF-α-induced apoptosis in vitro. Mice and hepatocytes treated with TP were sensitive to TNF-α, which was released from LPS-stimulated immune cells. These and other results show that the TP-induced inhibition of NF-κB-dependent transcriptional activity and FLIP production are responsible for liver hypersensitivity.
- Published
- 2020
- Full Text
- View/download PDF
19. hnRNPK knockdown alleviates NLRP3 inflammasome priming by repressing FLIP expression in Raw264.7 macrophages
- Author
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Junxia Feng, Hongyan Li, Jingchun Li, Ping Meng, Lina Wang, Chunli Liu, Shili Zhao, Wei Sun, and Yunfang Zhang
- Subjects
hnrnpk ,nlrp3 inflammasome ,flip ,macrophages ,lps/atp ,il-1β ,il-18 ,chronic kidney disease ,Pathology ,RB1-214 ,Biology (General) ,QH301-705.5 - Abstract
Objectives: Inflammation is an important predisposing and progressive factor in chronic kidney disease (CKD). Heterogeneous nuclear ribonucleoprotein K (hnRNPK) is associated with many fundamental cellular processes, but in chronic inflammatory pathologies remains unclear. Methods: An in vitro peripheral inflammation model was established using lipopolysaccharide (LPS)-stimulated mouse RAW264.7 macrophages, followed by inflammasome activation by ATP treatment. Knockdown of hnRNPK by sihnRNPK and FLICE-like inhibitory protein (FLIP) by siFLIP transfection were achieved in Raw264.7 macrophages. ELISA was used to determine the expression of IL-1β, IL-18 and TNF-α. Real time PCR was applied to detect the mRNA levels of hnRNPK, NOD-like receptors family pyrin domain-containing 3 (NLRP3), FLIP, Caspase-1, IL-1β and IL-18. Western blot and immunofluorescence were performed to detect relevant protein expressions. Co-immunoprecipitation (Co-IP) was used to assess the interaction of hnRNPK with FLIP. Results: Results showed that LPS plus ATP activated NLRP3 inflammasome, which evidenced by the up-regulation of TNF-α, IL-1β and IL-18. Notably, hnRNPK and FLIP were significantly up-regulated in activated NLRP3 inflammasome of macrophages. HnRNPK or FLIP knockdown significantly suppressed the activation of NLRP3 inflammasome, as reflected by down-regulation of Caspase-1, IL-1β and IL-18. Importantly, hnRNPK could directly bind to FLIP in activated NLRP3 inflammasome. Discussion: Our findings suggest that hnRNPK could promote the activation of NLRP3 inflammasome by directly binding FLIP, which might provide potential new therapeutic targets for CKD.
- Published
- 2020
- Full Text
- View/download PDF
20. Design and Motion Planning of a Metamorphic Flipping Robot
- Author
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Yuntao Guan, Zheming Zhuang, Chunsong Zhang, Zhao Tang, Ze Zhang, and Jian S. Dai
- Subjects
reconfigure ,legged robot ,flexible waist ,flip ,Materials of engineering and construction. Mechanics of materials ,TA401-492 ,Production of electric energy or power. Powerplants. Central stations ,TK1001-1841 - Abstract
With the advantages of high flexibility, strong adaptability, etc., the legged robot can help humans to complete numerous complicated tasks. In this paper, a kind of reconfigurable legged robot with a flexible waist was proposed. Compared with the common robots with a rigid trunk, the proposed robot can twist its waist flexibly. Through analysis, it is found that the flexible waist can improve the trunk workspace, foot endpoints’ workspace and static stability margin of the robot, and further enhance the motion performance of the robot. Meanwhile, by imitating the creatures in nature, the motion gait planning of the robot was provided. Additionally, the proposed robot has excellent reconfigurable characteristics, and can flexibly transform among three forms to adapt to different working environments and accomplish different tasks. Further, after capsizing, the robot can complete the motion of turning over more easily. In this paper, the reconfiguration posture and the motion of turning over of the robot were planned in detail, and finally verified by ADAMS simulation.
- Published
- 2022
- Full Text
- View/download PDF
21. Restoring TRAILR2/DR5-Mediated Activation of Apoptosis upon Endoplasmic Reticulum Stress as a Therapeutic Strategy in Cancer
- Author
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Rocío Mora-Molina and Abelardo López-Rivas
- Subjects
apoptosis ,extrinsic pathway ,TRAILR2/DR5 ,FLIP ,cancer ,endoplasmic reticulum stress ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
The uncontrolled proliferation of malignant cells in growing tumors results in the generation of different stressors in the tumor microenvironment, such as nutrient shortage, hypoxia and acidosis, among others, that disrupt endoplasmic reticulum (ER) homeostasis and may lead to ER stress. As a response to ER stress, both normal and tumor cells launch a set of signaling pathways known as the unfolded protein response (UPR) to restore ER proteostasis and maintain cell viability and function. However, under sustained ER stress, an apoptotic cell death process can be induced and this has been the subject of different review articles, although the role of the TRAIL-R2/DR5-activated extrinsic pathway of apoptosis has not yet been thoroughly summarized. In this Review, we provide an updated overview of the molecular mechanisms regulating cell fate decisions in tumor cells undergoing ER stress and discuss the role of the tumor necrosis factor (TNF)-related apoptosis-inducing ligand receptor 2 (TRAIL-R2/DR5) in the final outcome of UPR signaling. Particularly, we focus on the mechanisms controlling cellular FLICE-like inhibitory protein (FLIP) levels in tumor cells undergoing ER stress, which may represent a potential target for therapeutic intervention in cancer.
- Published
- 2022
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- View/download PDF
22. Effect of Aerobic Exercise and Vitamin D on Expression of Pulmonary Fas, Caspase8, and FLIP Genes in Male Rats Poisoned by H2O2
- Author
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tahereh haeri, mohammad ali azarbayjani, and maghsoud peeri
- Subjects
apoptosis ,vitamin d ,caspase8 ,flip ,fas ,Medicine - Abstract
Background and Objectives: Apoptosis is essential for the survival and normal functioning of multicellular organisms, yet any interruption in this process could be detrimental. Increased production of reactive oxygen species and oxidative stress are key factors affecting apoptosis. Our objective was to determine the impact of exercise with and without vitamin D supplementation on expression of FLIP, Fas, and caspase 8 in lung of rats poisoned with H2O2. Methods: Forty-eight adult male rats were randomly divided into six groups: (C), (H), (HD), (HE), (HDE) and dimethyl sulfoxide. Groups H, HE, HD and HDE received 1 mmol/Kg intraperitoneal injection of H2O2. HE and HDE groups ran on treadmill for eight weeks. Expression of FLIP, Fas and caspase 8 was measured in lung tissues using RT-qPCR. Statistical analysis of data was carried out using SPSS 22 at significance level of 0.05. Results: Vitamin D supplementation caused a significant decrease in expression of Fas (P=0.014) and caspase 8 (P=0.016) compared to the control group. However, it significantly overexpressed FLIP in the lung tissues compared to the control group (P=0.005). Exercise with and without vitamin D supplementation had no significant effect on the expression of the apoptosis regulatory genes. Conclusion: Our results show that VD exerts protective effects on lung tissue by regulating apoptotic factors. Aerobic exercise alone and combined with VD has no significant effect on the apoptotic factors. These results indicate that VD supplementation can reduce lung injury under oxidative stress conditions.
- Published
- 2019
23. Using Flip in an English Presentation Class With Japanese University Students
- Author
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Adam, Roarty
- Subjects
EFL speaking ,flip ,technology assisted language learning ,presentation skills - Published
- 2023
24. Codimension-One and -Two Bifurcations of a Three-Dimensional Discrete Game Model.
- Author
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Eskandari, Zohreh, Alidousti, Javad, and Ghaziani, Reza Khoshsiar
- Subjects
- *
BIFURCATION diagrams , *CONTINUATION methods , *RESONANCE - Abstract
In this paper, bifurcation analysis of a three-dimensional discrete game model is provided. Possible codimension-one (codim-1) and codimension-two (codim-2) bifurcations of this model and its iterations are investigated under variation of one and two parameters, respectively. For each bifurcation, normal form coefficients are calculated through reduction of the system to the associated center manifold. The bifurcations detected in this paper include transcritical, fold, flip (period-doubling), Neimark–Sacker, period-doubling Neimark–Sacker, resonance 1:2, resonance 1:3, resonance 1:4 and fold-flip bifurcations. Moreover, we depict bifurcation diagrams corresponding to each bifurcation with the aid of numerical continuation method. These bifurcation curves not only confirm our analytical results, but also reveal a richer dynamics of the model especially in the higher iterations. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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- View/download PDF
25. FESTIVAIS PARA QUÊ? AFETO E PERFORMANCE NA LITERATURA.
- Author
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Fernandes, Frederico Garcia
- Abstract
Festivais literários fomentam uma política cultural cujos desdobramentos irão recair na significação do texto literário, tanto por meio dos dispositivos de afeto quanto pelas performances dos autores. Este artigo analisa o impacto desses eventos na cultura literária brasileira e propõe uma reflexão sobre as relações entre performance e literatura, contribuindo para ampliar o debate sobre a mediação literária. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
26. Desarrollo de una herramienta para la visualización de protección costera
- Abstract
Este trabajo abarca varias técnicas de desarrollo de HDA y creación de simulaciones de fluido de manera procedural y en el que se crea una herramienta de visualización de fluidos para la protección costera.
- Published
- 2023
27. Flip Parkhaus
- Abstract
Flip Parkhaus är ett projekt vars mål är att starta en diskussion kring bostadsmarknadens nuvarande utformning. Projektet är baserat i Berlin, en stad där situationen för de som söker bostad snabbt har förändrats. Den som letar efter någonstans att bo får ofta leta länge eller betala en överhyra, och de som redan bor får inte sällan tampas med orimliga hyresvärdar och villkor. Flip Parkhaus kritiserar bostadsmarknaden och föreslår ett alternativ för de bostadssökande. Genom att organisera sig och initiera en transformation av ett övergivet parkeringshus skapas nya bostäder där det tidigare endast funnits ödslighet. Transformationen innebär inte bara att man skapar nya bostäder, utan man skapar även rum för allmänheten. Det finns plats för kreativitet, lek och rum för diskussion. Projektets namn kommer från den av hyresvärdar ofta nyttjade praktiken flipping, som bygger på att man renoverar ett hyreshus, ofta slarvigt och opersonligt, för att göra det mer attraktivt på marknaden och kunna ta ut en högre månadshyra. Flip Parkhaus spelar på den egentliga betydelsen av det engelska ordet flip, som kan översättas till vända eller kasta om. Projektet ska läsas från hyresgästernas perspektiv och tolkas som en återgång, eller vändning, till bostaden som ett hem snarare än en lukrativ investering., Flip Parkhaus is a project that aims to start a discussion about the current housing market. The project is based in Berlin, a city where the situation for those seeking housing has changed rapidly. People looking for a place to live must often search for a long time or pay an excessive rent, and those who are already housed often have to deal with unreasonable landlords and conditions. Flip Parkhaus criticises the housing market by proposing an alternative for those looking for accommodation. By organizing and initiating a transformation of an abandoned car park, new housing is created where previously there was only desolation. The transformation not only creates new housing, but also creates space for the public. There is room for creativity, play and space for discussion. The project’s name comes from the practice of flipping, frequently used by landlords, which involves renovating an apartment building, often sloppy and impersonally, to make it more attractive on the market and charge a higher monthly rent. Flip Parkhaus plays on the meaning of the English word flip, which can be understood as to turn or throw. The project should be read from the perspective of the tenants and interpreted as a return, or flip, to housing as a home rather than a lucrative investment.
- Published
- 2023
28. hnRNPK knockdown alleviates NLRP3 inflammasome priming by repressing FLIP expression in Raw264.7 macrophages.
- Author
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Feng, Junxia, Li, Hongyan, Li, Jingchun, Meng, Ping, Wang, Lina, Liu, Chunli, Zhao, Shili, Sun, Wei, and Zhang, Yunfang
- Subjects
- *
NLRP3 protein , *MACROPHAGES , *CHRONIC kidney failure , *MESSENGER RNA , *PROTEIN expression - Abstract
Objectives: Inflammation is an important predisposing and progressive factor in chronic kidney disease (CKD). Heterogeneous nuclear ribonucleoprotein K (hnRNPK) is associated with many fundamental cellular processes, but in chronic inflammatory pathologies remains unclear. Methods: An in vitro peripheral inflammation model was established using lipopolysaccharide (LPS)-stimulated mouse RAW264.7 macrophages, followed by inflammasome activation by ATP treatment. Knockdown of hnRNPK by sihnRNPK and FLICE-like inhibitory protein (FLIP) by siFLIP transfection were achieved in Raw264.7 macrophages. ELISA was used to determine the expression of IL-1β, IL-18 and TNF-α. Real time PCR was applied to detect the mRNA levels of hnRNPK, NOD-like receptors family pyrin domain-containing 3 (NLRP3), FLIP, Caspase-1, IL-1β and IL-18. Western blot and immunofluorescence were performed to detect relevant protein expressions. Co-immunoprecipitation (Co-IP) was used to assess the interaction of hnRNPK with FLIP. Results: Results showed that LPS plus ATP activated NLRP3 inflammasome, which evidenced by the up-regulation of TNF-α, IL-1β and IL-18. Notably, hnRNPK and FLIP were significantly up-regulated in activated NLRP3 inflammasome of macrophages. HnRNPK or FLIP knockdown significantly suppressed the activation of NLRP3 inflammasome, as reflected by down-regulation of Caspase-1, IL-1β and IL-18. Importantly, hnRNPK could directly bind to FLIP in activated NLRP3 inflammasome. Discussion: Our findings suggest that hnRNPK could promote the activation of NLRP3 inflammasome by directly binding FLIP, which might provide potential new therapeutic targets for CKD. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
29. Swap and Rotate: Lightweight Linear Layers for SPN-based Blockciphers
- Author
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Subhadeep Banik, Fatih Balli, Francesco Regazzoni, and Serge Vaudenay
- Subjects
Lightweight circuit ,PRESENT ,GIFT ,FLIP ,Computer engineering. Computer hardware ,TK7885-7895 - Abstract
In CHES 2017, Jean et al. presented a paper on “Bit-Sliding” in which the authors proposed lightweight constructions for SPN based block ciphers like AES, PRESENT and SKINNY. The main idea behind these constructions was to reduce the length of the datapath to 1 bit and to reformulate the linear layer for these ciphers so that they require fewer scan flip-flops (which have built-in multiplexer functionality and so larger in area as compared to a simple flip-flop). In this paper, we develop their idea even further in few separate directions. First, we prove that given an arbitrary linear transformation, it is always possible to construct the linear layer using merely 2 scan flip-flops. This points to an optimistic venue to follow to gain further GE reductions, yet the straightforward application of the techniques in our proof to PRESENT and GIFT leads to inefficient implementations of the linear layer, as reducing ourselves to 2 scan flip-flops setting requires thousands of clock cycles and leads to very high latency. Equipped with the well-established formalism on permutation groups, we explore whether we can reduce the number of clock cycles to a practical level, i.e. few hundreds, by adding few more pairs of scan flip flops. For PRESENT, we show that 4 (resp. 8, 12) scan flip-flops are sufficient to complete the permutation layer in 384 (resp. 256, 128) clock cycles. For GIFT, we show that 4 (resp. 8, 10) scan flip flops correspond to 320 (resp. 192, 128) clock cycles. Finally, in order to provide the best of the two worlds (i.e. circuit area and latency), we push our scan flip-flop choices even further to completely eliminate the latency incurred by the permutation layer, without compromising our stringent GE budget. We show that not only 12 scan flip flops are sufficient to execute PRESENT permutation in 64 clock cycles, but also the same scan flip flops can be used readily in a combined encryption decryption circuit. Our final design of PRESENT and GIFT beat the record of Jean et al. and Banik et al. in both latency and in circuit-size metric. We believe that the techniques presented in our work can also be used at choosing bit-sliding-friendly linear layer permutations for the future SPN-based designs.
- Published
- 2020
- Full Text
- View/download PDF
30. Immunohistochemical Analysis of the Extrinsic Apoptosis Process in the Non-Neoplastic and Neoplastic Prostate
- Author
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Ayşe Burcu İLERİ, Reşit Doğan KÖSEOĞLU, Fatma MARKOÇ, İlker ETİKAN, Doğan ATILGAN, and Faik Alev DERESOY
- Subjects
Prostate ,Carcinogenesis ,Fas ,FasL ,DcR1 ,FLIP ,Pathology ,RB1-214 - Abstract
Objective: Deviations in the apoptotic process have been demonstrated in prostate carcinogenesis. We aimed to evaluate especially the process of extrinsic apoptosis in the spectrum of neoplastic lesions of the prostate epithelium so as to reveal the variations in the apoptotic process. Material and Method: The study included 20 benign prostatic hyperplasia, 8 high-grade prostatic intraepithelial neoplasia and 82 prostatic carcinoma patients. Immunohistochemistry was performed on sections obtained from materials of suprapubic prostatectomy, tru-cut biopsy, transurethral resection and radical prostatectomy. While Fas and FasL were evaluated in glandular and stromal areas, DcR1 and FLIP were evaluated in only glandular areas. Intensity and extent of immunostaining for Fas and FasL antibodies were separately scored and both scores were summarized. The total score of ≥ 4 both for Fas and FasL, expressions of FLIP and DcR1determined in more than 5% of glandular areas were accepted as positive. Results: Glandular FasL positivity was observed in 63.8 and 20% of the cases with prostatic carcinoma and benign prostatic hyperplasia, respectively (p=0.001). The loss of stromal Fas expression in PCa was obvious (p
- Published
- 2018
- Full Text
- View/download PDF
31. The pseudo-caspase FLIP(L) regulates cell fate following p53 activation.
- Author
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Lees, Andrea, McIntyre, Alexander J., Crawford, Nyree T., Falcone, Fiammetta, McCann, Christopher, Holohan, Caitriona, Quinn, Gerard P., Roberts, Jamie Z., Sessler, Tamas, Gallagher, Peter F., Gregg, Gemma M. A., McAllister, Katherine, McLaughlin, Kirsty M., Allen, Wendy L., Egan, Laurence J., Ryan, Aideen E., Labonte-Wilson, Melissa J., Dunne, Philip D., Wappett, Mark, and Coyle, Vicky M.
- Subjects
- *
TUMOR suppressor genes , *APOPTOSIS , *DEATH receptors , *P53 antioncogene , *FUNCTIONAL genomics - Abstract
p53 is the most frequently mutated, well-studied tumor-suppressor gene, yet the molecular basis of the switch from p53-induced cellcycle arrest to apoptosis remains poorly understood. Using a combination of transcriptomics and functional genomics, we unexpectedly identified a nodal role for the caspase-8 paralog and only human pseudo-caspase, FLIP(L), in regulating this switch. Moreover, we identify FLIP(L) as a direct p53 transcriptional target gene that is rapidly up-regulated in response to Nutlin-3A, an MDM2 inhibitor that potently activates p53. Genetically or pharmacologically inhibiting expression of FLIP(L) using siRNA or entinostat (a clinically relevant class- I HDAC inhibitor) efficiently promoted apoptosis in colorectal cancer cells in response to Nutlin-3A, which otherwise predominantly induced cell-cycle arrest. Enhanced apoptosis was also observed when entinostat was combined with clinically relevant, p53-activating chemotherapy in vitro, and this translated into enhanced in vivo efficacy. Mechanistically, FLIP(L) inhibited p53-induced apoptosis by blocking activation of caspase-8 by the TRAIL-R2/DR5 death receptor; notably, this activation was not dependent on receptor engagement by its ligand, TRAIL. In the absence of caspase-8, another of its paralogs, caspase-10 (also transcriptionally up-regulated by p53), induced apoptosis in Nutlin-3A-treated, FLIP(L)-depleted cells, albeit to a lesser extent than in caspase-8-proficient cells. FLIP(L) depletion also modulated transcription of canonical p53 target genes, suppressing p53- induced expression of the cell-cycle regulator p21 and enhancing p53-induced up-regulation of proapoptotic PUMA. Thus, even in the absence of caspase-8/10, FLIP(L) silencing promoted p53-induced apoptosis by enhancing PUMA expression. Thus, we report unexpected, therapeutically relevant roles for FLIP(L) in determining cell fate following p53 activation. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
32. Particle upsampling as a flexible post-processing approach to increase details in animations of splashing liquids.
- Author
-
Roy, Bruno, Paquette, Eric, and Poulin, Pierre
- Subjects
- *
LIQUIDS , *PARTICLES , *CELL size , *ADVECTION - Abstract
• Determine and upsample a splash volume for induced splash dynamics. • Special particles to infer surface tension behavior on upsampled particles. • Sparse implicit linear wave formulation to couple our model with input particles. • Offer a trade-off between realistic and artistic splash effects. • Following pre-computation steps, allow interactive splash editing. Realistic and detailed liquid splashes require costly fine-scale discretization. We present an efficient post-processing approach for particle-based methods to locally improve the behavior of splashes on coarser liquids. Our method first computes a splash volume over time from the intersections between an identified upsampling volume and colliding volumes. We then upsample particles inside cells of the splash volume; these cells are pre-computed using a likelihood score based on criteria favoring emerging particles. In addition to the advection scheme, enhanced realism is achieved by applying a localized artificial pressure on upsampled particles in order to mimic surface tension in critical regions of splashes. Finally, we propagate waves using a novel implicit model that couples the impact of upsampled particles on the coarser liquid by updating the velocity field at these locations. Our implicit wave model can produce detailed swirls by solely applying velocity updates directly on the underlying particles from the coarse liquid, and prevents from using a high density of surface points. As a result, our approach can generate localized and parameterizable high-resolution splashes from solid-liquid and liquid-liquid interactions, and thus can simulate a wide range of unique and customizable splashes on top of an animated coarse liquid. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
33. A new perspective of triptolide-associated hepatotoxicity: the relevance of NF-κB and NF-κB-mediated cellular FLICE-inhibitory protein.
- Author
-
Yuan, Ziqiao, Yuan, Zihang, Hasnat, Muhammad, Zhang, Haoran, Liang, Peishi, Sun, Lixin, Jiang, Zhenzhou, and Zhang, Luyong
- Subjects
HEPATOTOXICOLOGY ,PROTEIN expression ,APOPTOSIS ,LIVER cells ,PROTEINS - Abstract
Previously, we proposed a new perspective of triptolide (TP)-associated hepatotoxicity: liver hypersensitivity upon lipopolysaccharide (LPS) stimulation. However, the mechanisms for TP/LPS-induced hepatotoxicity remained elusive. The present study aimed to clarify the role of LPS in TP/LPS-induced hepatotoxicity and the mechanism by which TP induces liver hypersensitivity upon LPS stimulation. TNF- α inhibitor, etanercept, was injected intraperitoneally into mice to investigate whether induction of TNF- α by LPS participated in the liver injury induced by TP/LPS co-treatment. Mice and hepatocytes pretreated with TP were stimulated with recombinant TNF- α to assess the function of TNF- α in TP/LPS co-treatment. Additionally, time-dependent NF- κ B activation and NF- κ B-mediated pro-survival signals were measured in vivo and in vitro. Finally, overexpression of cellular FLICE-inhibitory protein (FLIP), the most potent NF- κ B-mediated pro-survival protein, was measured in vivo and in vitro to assess its function in TP/LPS-induced hepatotoxicity. Etanercept counteracted the toxic reactions induced by TP/LPS. TP-treatment sensitized mice and hepatocytes to TNF- α , revealing the role of TNF- α in TP/LPS-induced hepatotoxicity. Mechanistic studies revealed that TP inhibited NF- κ B dependent pro-survival signals, especially FLIP, induced by LPS/TNF- α. Moreover, overexpression of FLIP alleviated TP/LPS-induced hepatotoxicity in vivo and TP/TNF- α -induced apoptosis in vitro. Mice and hepatocytes treated with TP were sensitive to TNF- α , which was released from LPS-stimulated immune cells. These and other results show that the TP-induced inhibition of NF- κ B-dependent transcriptional activity and FLIP production are responsible for liver hypersensitivity. Triptolide (TP) treatment increased the sensitivity of liver upon lipopolysaccharide (LPS), which participated in TP/LPS-induced hepatotoxicity through promoting the TNF- α release. Inactivation of NF- κ B and NF- κ B-mediated cellular FLICE-inhibitory protein expression by TP were responsible for this sensitization. It is necessary to pay attention to the hepatotoxicity of drugs that block TNF- α -TNF-R1 signaling. Image 1 [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
34. A revised model of TRAIL‐R2 DISC assembly explains how FLIP(L) can inhibit or promote apoptosis.
- Author
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Humphreys, Luke M, Fox, Jennifer P, Higgins, Catherine A, Majkut, Joanna, Sessler, Tamas, McLaughlin, Kirsty, McCann, Christopher, Roberts, Jamie Z, Crawford, Nyree T, McDade, Simon S, Scott, Christopher J, Harrison, Timothy, and Longley, Daniel B
- Abstract
The long FLIP splice form FLIP(L) can act as both an inhibitor and promoter of caspase‐8 at death‐inducing signalling complexes (DISCs) formed by death receptors such as TRAIL‐R2 and related intracellular complexes such as the ripoptosome. Herein, we describe a revised DISC assembly model that explains how FLIP(L) can have these opposite effects by defining the stoichiometry (with respect to caspase‐8) at which it converts from being anti‐ to pro‐apoptotic at the DISC. We also show that in the complete absence of FLIP(L), procaspase‐8 activation at the TRAIL‐R2 DISC has significantly slower kinetics, although ultimately the extent of apoptosis is significantly greater. This revised model of DISC assembly also explains why FLIP's recruitment to the TRAIL‐R2 DISC is impaired in the absence of caspase‐8 despite showing that it can interact with the DISC adaptor protein FADD and why the short FLIP splice form FLIP(S) is the more potent inhibitor of DISC‐mediated apoptosis. Synopsis: A revised model of TRAIL‐R2 DISC assembly and stoichiometry can explain the ability of FLIP(L) to act as either an inhibitor or activator of apoptosis signalling in these complexes. The stoichiometry of the pseudo‐caspase FLIP(L) relative to caspase‐8 at the TRAIL‐R2 death‐inducing signalling complex (DISC) was re‐examined.When equistochiometric with capase‐8, FLIP(L) inhibits apoptosis at the TRAIL‐R2 DISC (caspase‐8:FLIP(L) ratio ≈ 1:1).Sub‐stoichiometric FLIP(L) (caspase‐8:FLIP(L) ratio > 1:1) accelerates caspase‐8 activation.The revised model of DISC assembly predicts that relatively small changes in FLIP(L)'s DISC recruitment can have profound effects on cell death signalling. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
35. Analysis on Boolean Function in a Restricted (Biased) Domain.
- Author
-
Maitra, Subhamoy, Mandal, Bimal, Martinsen, Thor, Roy, Dibyendu, and Stanica, Pantelimon
- Subjects
- *
BOOLEAN functions , *STREAM ciphers , *NONLINEAR functions , *CIPHERS - Abstract
Boolean functions are usually studied under the assumption that each input bit is considered independent and identically distributed. However, in the case of some stream ciphers, a keystream bit is generated by using a nonlinear Boolean function with inputs from a restricted domain. At Eurocrypt 2016, one such stream cipher (FLIP) has been proposed, where a Boolean function on $n$ variables was exploited with inputs of weight $\frac {n}{2}$ only. Recently, Carlet et al. studied several properties of such functions and obtained certain bounds on linear approximations of direct sum in the restricted domain. In this paper, we observe that for a direct sum like $f=f_{1}+f_{2}$ , the inputs to each sub-function $f_{1}$ , $f_{2}$ do not follow a uniform distribution in the restricted domain. In this regard, we study the properties of the Boolean functions by considering a general probability distribution on the inputs. We further obtain several bounds related to the biases of direct sums. Finally, we obtain a lower bound on the bias of the nonlinear filter function of FLIP. Our results provide a general framework to study security parameters of ciphers over restricted domain. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
36. Recent advances in dysphagia management [version 1; peer review: 3 approved]
- Author
-
Joseph Triggs and John Pandolfino
- Subjects
Review ,Articles ,dysphagia ,manometry ,FLIP ,esophagus ,EGJOO ,jackhammer - Abstract
The literal definition of dysphagia is “disturbed eating”. However, it is more accurately described in clinical practice as a sensation of food or liquid being stuck in the esophagus or chest. If this sensation is associated with pain, it is labeled odynophagia, and if it is associated with persistent obstruction and bolus retention, it is categorized as a food impaction. Through research and technological advances, we continue to expand our understanding of the etiologies and underlying pathophysiology relating to this complaint. However, for now, our clinical algorithms focus on endoscopy and manometry to break down dysphagia into three categories: obstructive dysphagia, esophageal motility disorders, and functional dysphagia. Here, we review some critical pitfalls in our current clinical diagnoses, new proposed underlying mechanisms of esophageal motor disorders, and developing technologies to aid in diagnosis and treatment.
- Published
- 2019
- Full Text
- View/download PDF
37. Therapeutics Targeting the Core Apoptotic Machinery
- Author
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Claudia Hamilton, Jennifer P. Fox, Daniel B. Longley, and Catherine A. Higgins
- Subjects
apoptosis ,cancer therapeutics ,resistance ,FLIP ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Therapeutic targeting of the apoptotic pathways for the treatment of cancer is emerging as a valid and exciting approach in anti-cancer therapeutics. Accumulating evidence demonstrates that cancer cells are typically “addicted” to a small number of anti-apoptotic proteins for their survival, and direct targeting of these proteins could provide valuable approaches for directly killing cancer cells. Several approaches and agents are in clinical development targeting either the intrinsic mitochondrial apoptotic pathway or the extrinsic death receptor mediated pathways. In this review, we discuss the main apoptosis pathways and the key molecular targets which are the subject of several drug development approaches, the clinical development of these agents and the emerging resistance factors and combinatorial treatment approaches for this class of agents with existing and emerging novel targeted anti-cancer therapeutics.
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- 2021
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38. Boolean functions with restricted input and their robustness; application to the FLIP cipher
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Claude Carlet, Pierrick Méaux, and Yann Rotella
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FLIP ,Boolean function ,balance ,nonlinearity ,algebraic immunity ,constrained input ,Computer engineering. Computer hardware ,TK7885-7895 - Abstract
We study the main cryptographic features of Boolean functions (balancedness, nonlinearity, algebraic immunity) when, for a given number n of variables, the input to these functions is restricted to some subset E of
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- 2017
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39. Validation of Clinically Relevant Thresholds of Esophagogastric Junction Obstruction Using FLIP Panometry
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Jacob M. Schauer, Dustin A. Carlson, Wenjun Kou, Alexandra J. Baumann, Amanda J. Krause, Peter J. Kahrilas, John E. Pandolfino, Erica Donnan, and Jacqueline Prescott
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Adult ,medicine.medical_specialty ,Manometry ,Achalasia ,Asymptomatic ,Endoscopy, Gastrointestinal ,Article ,medicine ,Humans ,Esophageal Motility Disorders ,High resolution manometry ,Hepatology ,Receiver operating characteristic ,medicine.diagnostic_test ,business.industry ,Gastroenterology ,Reflux ,medicine.disease ,Dysphagia ,Endoscopy ,Esophageal Achalasia ,Flip ,Esophagogastric Junction ,Radiology ,medicine.symptom ,business - Abstract
BACKGROUND & AIMS: This study aimed to assess the accuracy of functional luminal imaging probe (FLIP) Panometry to detect esophagogastric junction (EGJ) obstruction assigned by high-resolution manometry (HRM) and the Chicago Classification version 4.0 (CCv4.0). METHODS: 687 adult patients that completed FLIP and HRM for primary esophageal motility evaluation and 35 asymptomatic volunteers (“controls”) were included. EGJ opening was evaluated with 16-cm FLIP during sedated endoscopy via EGJ-distensibility index (DI) and maximum EGJ diameter. HRM was classified according to CCv4.0 and focused on studies with a conclusive disorder of EGJ outflow (i.e. achalasia subtypes I, II, or III; or EGJ outflow obstruction with abnormal timed barium esophagram) or normal EGJ outflow. RESULTS: All 35 controls had EGJ-DI >3.0mm(2)/mmHg and maximum EGJ diameter >16mm. Per HRM and CCv4.0, 245 patients had a conclusive disorder of EGJ outflow and 314 patients had normal EGJ outflow. Among the 241 patients with reduced EGJ opening (REO: EGJ-DI
- Published
- 2022
40. Asynchronous student-generated flip videos facilitate student learning and assessment in a large-enrollment introductory human physiology course.
- Author
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Guffey HE, Mrocko AL, Smith BK, and Spranger MD
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- Humans, Students, Learning, Curriculum, Educational Measurement methods, Education, Distance
- Abstract
Oral demonstration of knowledge is an effective learning and assessment strategy. It has been shown that generating explanations to oneself, or self-explaining, can improve student understanding of information. This can be achieved via student-generated videos. The quantitative effects of student-generated videos on learning and assessment in postsecondary education are unknown. To our knowledge, this is the first study to analyze the effects asynchronous student-generated videos have on student learning and assessment in a large-enrollment (∼400 students), undergraduate physiology course. Students were charged with making self-generated videos discussing major physiological concepts and uploading these videos to Flip for assessment. Flip is an online, social education platform for asynchronous video-based discussion. In the present study, we combined four semesters ( n = 1,100 students) of Flip data and analyzed the effects it had on student examination performance. Specifically, we first analyzed how students performed on exam questions corresponding to their Flip prompts in comparison to students not assigned those prompts [25/44 (57%) were statistically significantly different]. Second, we analyzed the association between Flip prompt score and performance on corresponding exam questions [39/44 (89%) were statistically significantly different]. Third, we analyzed the association between cumulative Flip score and performance on all corresponding, and noncorresponding exam questions. Finally, we analyzed the association between cumulative Flip score and averaged exam performance. There was a positive association ( r = 0.54). Taken together, our data suggest that asynchronous student-generated Flip videos can facilitate student learning and assessment in a large-enrollment, undergraduate physiology course. NEW & NOTEWORTHY Oral demonstration of knowledge is an effective learning and assessment strategy. Student-generated videos have been shown to improve learning and assessment in secondary education. To our knowledge, this is the first study to analyze the effects asynchronous student-generated Flip videos have on student learning and assessment in postsecondary education. The results of the present study suggest that asynchronous student-generated Flip videos can facilitate student learning and assessment in a large-enrollment (∼400 students), undergraduate physiology course.
- Published
- 2023
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- View/download PDF
41. Multi-user security bound for filter permutators in the random oracle model.
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Cogliati, Benoît and Tanguy, Titouan
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STREAM ciphers ,FILTERS & filtration ,CIPHERS - Abstract
At EUROCRYPT 2016, Méaux et al. introduced a new design strategy for symmetric ciphers for fully homomorphic encryption (FHE), which they dubbed filter permutators. Although less efficient than classical stream ciphers, when used in conjunction with an adequate FHE scheme, they allow constant and small noise growth when homomorphically evaluating decryption circuit. In this article, we present a security proof up to the birthday bound (with respect to the size of the IV and the size of the key space) for this new structure in the random oracle model and in the multi-user setting. In particular, this result justifies the theoretical soundness of filter permutators. We also provide a related-key attack against all instances of FLIP, a stream cipher based on this design. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
42. On a family of Caldero–Chapoton algebras that have the Laurent phenomenon.
- Author
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Labardini-Fragoso, Daniel and Velasco, Diego
- Subjects
- *
SEMIGROUP algebras , *POLYGONS , *CLUSTER algebras , *COMMUTATIVE algebra , *ISOMORPHISM (Mathematics) - Abstract
Abstract We realize a family of generalized cluster algebras as Caldero–Chapoton algebras of quivers with relations. Each member of this family arises from an unpunctured polygon with one orbifold point of order 3, and is realized as a Caldero–Chapoton algebra of a quiver with relations naturally associated to any triangulation of the alluded polygon. The realization is done by defining for every arc j on the polygon with orbifold point a representation M (j) of the referred quiver with relations, and by proving that for every triangulation τ and every arc j ∈ τ , the product of the Caldero–Chapoton functions of M (j) and M (j ′) , where j ′ is the arc that replaces j when we flip j in τ , equals the corresponding exchange polynomial of Chekhov–Shapiro in the generalized cluster algebra. Furthermore, we show that there is a bijection between the set of generalized cluster variables and the isomorphism classes of E -rigid indecomposable decorated representations of Λ. [ABSTRACT FROM AUTHOR]
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- 2019
- Full Text
- View/download PDF
43. FLIP as a therapeutic target in cancer.
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Humphreys, Luke, Espona‐Fiedler, Margarita, and Longley, Daniel B.
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- *
CANCER treatment , *CELL death , *CANCER cells , *CELLULAR signal transduction , *CANCER chemotherapy - Abstract
One of the classic hallmarks of cancer is disruption of cell death signalling. Inhibition of cell death promotes tumour growth and metastasis, causes resistance to chemo‐ and radiotherapies as well as targeted agents, and is frequently due to overexpression of antiapoptotic proteins rather than loss of pro‐apoptotic effectors. FLIP is a major apoptosis‐regulatory protein frequently overexpressed in solid and haematological cancers, in which its high expression is often correlated with poor prognosis. FLIP, which is expressed as long (FLIP(L)) and short (FLIP(S)) splice forms, achieves its cell death regulatory functions by binding to FADD, a critical adaptor protein which links FLIP to the apical caspase in the extrinsic apoptotic pathway, caspase‐8, in a number of cell death regulating complexes, such as the death‐inducing signalling complexes (DISCs) formed by death receptors. FLIP also plays a key role (together with caspase‐8) in regulating another form of cell death termed programmed necrosis or 'necroptosis', as well as in other key cellular processes that impact cell survival, including autophagy. In addition, FLIP impacts activation of the intrinsic mitochondrial‐mediated apoptotic pathway by regulating caspase‐8‐mediated activation of the pro‐apoptotic Bcl‐2 family member Bid. It has been demonstrated that FLIP can not only inhibit death receptor‐mediated apoptosis, but also cell death induced by a range of clinically relevant chemotherapeutic and targeted agents as well as ionizing radiation. More recently, key roles for FLIP in promoting the survival of immunosuppressive tumour‐promoting immune cells have been discovered. Thus, FLIP is of significant interest as an anticancer therapeutic target. In this article, we review FLIP's biology and potential ways of targeting this important tumour and immune cell death regulator. FLIP is a key regulator of apoptosis through its ability to regulate procaspase‐8 dimerization, processing and activation. In addition, FLIP is involved in other critical cellular processes such as autophagy and necroptosis. Here, we provide an up‐to‐date review on the function and regulation of FLIP and discuss strategies for therapeutic targeting of this important cell death regulator in cancer. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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- View/download PDF
44. Measuring length-tension function of the anal sphincters and puborectalis muscle using the functional luminal imaging probe.
- Author
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Tuttle, Lori J., Zifan, Ali, Sun, Catherine, Swartz, Jessica, Roalkvam, Sophia, and Mittal, Ravinder K.
- Subjects
- *
MUSCLES , *ANUS , *MANOMETERS - Abstract
The functional luminal imaging probe (FLIP) has been used to measure the distensibility of the anal canal. We hypothesized that with increasing distension of the anal canal with FLIP there will be an increase in length of the anal sphincter muscle allowing measurement of the length-tension function of anal sphincter and puborectalis muscles (PRM). We studied 14 healthy nulliparous women. A custom-designed FLIP bag (30-mm diameter) was placed in the vagina and then in the anal canal, distended in 10-ml steps with volumes ranging from 30 to 90 ml. At each volume, subject performed maximal voluntary squeezes. Length-tension measurements were also made with a manometric probe system. Tension was calculated (pressure x radius) in Newtons per meter using a custom software program. Peak tensions at different FLIP volumes were compared with the manometric data. No change in the luminal CSA was noted at low fluid volumes; the sphincter muscles were able to fully collapse the FLIP bag within the anal canal/vagina even at rest. At larger volumes, with each squeeze there was an increase in the bag pressure and reduction in the cross-sectional area, which represents concentric contraction of the muscle. Both rest and squeeze tension increased with the increase in volume in the anal as well as vaginal canal indicating that the external anal sphincter and puborectalis muscles produce more tension when lengthened. FLIP device, which has been used to describe the distensibility of the anal canal can also provide information on the length-tension function of the anal sphincters and PRM. NEW & NOTEWORTHY The functional luminal imaging probe (FLIP) has been used to describe the distensibility of the anal canal. This report is the first to describe the use of the FLIP in the vaginal canal and the anal canal to provide information on the length-tension function of the anal sphincter and puborectalis muscles, which may provide clinicians with additional information regarding the active components of muscle contraction involved in the anal closure function. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
45. Transverse distribution of plasma membrane bilayer cholesterol: Picking sides.
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Steck, Theodore L. and Lange, Yvonne
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- *
CELL membranes , *BILAYER lipid membranes , *PHYSIOLOGICAL effects of cholesterol , *SPHINGOMYELIN , *MAMMAL physiology - Abstract
The transverse asymmetry (sidedness) of phospholipids in plasma membrane bilayers is well characterized, distinctive, actively maintained and functionally important. In contrast, numerous studies using a variety of techniques have concluded that plasma membrane bilayer cholesterol is either mostly in the outer leaflet or the inner leaflet or is fairly evenly distributed. Sterols might simply partition according to their differing affinities for the asymmetrically disposed phospholipids, but some studies have proposed that it is actively transported to the outer leaflet. Other work suggests that the sterol is enriched in the inner leaflet, driven by either positive interactions with the phosphatidylethanolamine on that side or by its exclusion from the outer leaflet by the long chain sphingomyelin molecules therein. This uncertainty raises three questions: is plasma membrane cholesterol sidedness fixed in a given cell or cell type; is it generally the same among mammalian species; and does it serve specific physiological functions? This review grapples with these issues. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
46. Influences of Surface Waves on the Open Ocean Wind Stress Vector
- Author
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Rieder, Karl F.
- Subjects
wave influence ,FLIP ,wind stress ,whitecap motion - Abstract
Open ocean measurements of the turbulent wind, directional wave field, and wave breaking are used to investigate the effect of waves on the wind stress, the momentum flux between atmosphere and ocean. Data were collected during the Surface Waves and Processes Program (SWAPP), which took place in February and March of 1990 from the research platform FLIP, situated in the North Pacific.Traditional formulations of the drag coefficient are reviewed and tested in swell dominated, open ocean conditions in Chapter II. General trends indicate that drag increases with increasing wind speed, inverse wave age, and wave height, but the existence of significant scatter shows that none provides a stable, accurate estimate of the wind stress. However, significant correlations of the drag coefficient with these parameters are seen during the onset of three wind events, when waves are being actively generated. Additionally, the rate of increase of the drag coefficient in each of these periods is most closely linked to the turning rate of the wind, indicating that temporal and directional effects must play an important role.The directional relationship between waves and the wind stress is investigated in Chapter III. Non-zero angles between the direction of the wind stress and the mean wind are measured. In general, the direction of the wind stress lies between the directions of the mean wind and that of the long period swell. Moreover, a significant trend between the variations of the wind stress and swell directions is found for higher wind speeds. Finally, a relation between the wind stress and wave directions can be noticed as a function of frequency, suggesting a close dynamical link.A possible connection between wave breaking and the wind stress is investigated in Chapter IV. From comparisons of data from 15 half hour periods, the directions of the whitecap motion and the wind stress are found to be generally co-linear. As well, the speed of whitecap motion is shown to correlate with the drag coefficient. These results suggest that information about wave breaking may be used to estimate both the magnitude and direction of the wind stress.
- Published
- 1996
47. 以翻轉式概念構圖提升學生閱讀理解能力之研究 The Flip Concept Map in Relation to Student’s Reading Comprehension Skills
- Author
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吳佳娣 Chia-Ti Wu, 范含芸 Han-Yung Fan, 陳秀燕 Siou-Yan Chen, and 劉遠楨 Yuan-Chen Liu
- Subjects
概念構圖 ,閱讀理解 ,翻轉式 ,concept maps ,reading comprehension ,flip ,Education ,Theory and practice of education ,LB5-3640 - Abstract
本研究以翻轉式概念構圖為教學策略,期望能提升學生的閱讀理解能力。研究對象為新北市某國小五年級學生,以立意取樣選取兩個班級作為實驗組及控制組,實驗組教師運用翻轉式概念構圖進行教學,控制組教師以傳統講述式進行大意教學。本研究採準實驗研究設計,歷時10週,共10堂課(400分鐘),研究結果發現,實驗組經由翻轉式概念構圖的教學,在「提取訊息」與「推論訊息」沒有顯著差異,但在「詮釋整合」與「比較評估」的能力明顯優於控制組,且實驗組之中的高學習成效學生經過實驗後,在「推論訊息」能力上與低學習成效學生沒有顯著差異,但在「提取訊息」、「詮釋整合」及「比較評估」的能力優於低學習成效的學生。因此,翻轉式概念構圖教學策略能有效提升學生的閱讀理解能力。 In this study, using fl ip concept mapping teaching strategy, hoping to enhance the students’ reading comprehension. The participants is fi fth-grade students in a mountainous area of New Taipei City. Select two classes as the experimental group and a control group, experimental group for teachers to use fl ip concept mapping teaching, control group for teachers to use traditional teaching. Quasi-experimental design, which lasted ten weeks a total of ten lessons. The conclusions as following below: 1. Through fl ip concept map teaching, the “extract information” and “inference messages” of reading comprehension in experimental group shows nosignificant difference, but better than control group in ability of “explain integration” and “comparative assessment”. 2. Through experiments, the higher learning effectiveness of experimental group students show no significant difference in “inference messages” with lower learning effectiveness students, but better than lower learning effectiveness students in ability of “extract information,” “explain integration” and “comparative assessment”.
- Published
- 2016
- Full Text
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48. Active Components of Fungus Shiraia bambusiscola Can Specifically Induce BGC823 Gastric Cancer Cell Apoptosis
- Author
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Zhang Shubing, Qiu Dewen, Liu Jingjiang, and Li Zhijian
- Subjects
Shiraia Bambusicola ,Apoptosis ,PARP ,FLIP ,Gastric Cancer ,Medicine ,Science - Abstract
Objective Gastric cancer is a major health issue worldwide. Using a therapeutic approach, with minor side-effects, is very essential for the treatment of the gastric cancer. Shiraia bambusicola is a parasitic fungus which is widely used in China for curing several diseases with little side-effects. However, the mechanisms are not well understood yet. The aim of this study was to further understand the pharmacological mechanisms of Shiraia bambusicola and investigate whether it can be used for curing gastric cancer. Materials and Methods In this experimental study, we mainly tested the effect of active components extracted from Shiraia bambusicola on BGC823, A549 and HepG2 cells. We used MTT assay to test cell viability. We also analyzed morphologic changes caused by apoptosis using Hoechst 33342 fluorescence staining, as well as cell cycle status and apoptosis ratio using flow-cytometer. In addition, protein expression level was tested by Western-blotting assay. Results BGC-823 cell proliferation was specifically inhibited by active components of Shiraia bambusicola. Meanwhile, these active components could induce BGC-823 cells apoptosis and retard the cell cycle in S/G2 phase. We also determined that two critical protein markers cleaved Poly(ADP-ribose) polymerase-1 (PARP-1) and FLICE-inhibitory protein (FLIP), involved in apoptosis process, were regulated by these active components. Conclusion These data shed light on the treatment of human gastric cancer and conclude that Shiraia bambusicola can be a good therapeutic candidate for treatment of this malignancy.
- Published
- 2016
49. Classifying Esophageal Motility by FLIP Panometry: A Study of 722 Subjects With Manometry
- Author
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John O. Clarke, Abraham Khan, Wenjun Kou, John E. Pandolfino, C. Prakash Gyawali, Jose M. Garza, Alexandra J. Baumann, Erica Donnan, Dustin A. Carlson, Jacqueline Prescott, Philip O. Katz, Vani J. Konda, Felice Schnoll-Sussman, Marcelo F. Vela, Kristle L. Lynch, Anand Jain, Peter J. Kahrilas, Stuart J. Spechler, Reena V. Chokshi, Joan Chen, and Rena Yadlapati
- Subjects
Adult ,Male ,medicine.medical_specialty ,Adolescent ,Manometry ,Motility ,Distension ,Asymptomatic ,Gastroenterology ,Article ,Endoscopy, Gastrointestinal ,Young Adult ,Esophagus ,Internal medicine ,Humans ,Medicine ,Esophageal Motility Disorders ,Aged ,Retrospective Studies ,Peristalsis ,Aged, 80 and over ,Hepatology ,medicine.diagnostic_test ,business.industry ,Middle Aged ,medicine.disease ,Endoscopy ,Esophageal motility disorder ,Flip ,Female ,medicine.symptom ,business ,Esophageal motility - Abstract
BACKGROUND & AIMS: Functional luminal imaging probe (FLIP) Panometry can evaluate esophageal motility in response to sustained esophageal distension at the time of sedated endoscopy. This study aimed to describe a classification of esophageal motility using FLIP Panometry and evaluate it against high-resolution manometry (HRM) and Chicago Classification v4.0 (CCv4.0). METHODS: 539 adult patients that completed FLIP and HRM with a conclusive CCv4.0 diagnosis were included in the primary analysis. 35 asymptomatic volunteers (“controls”) and 148 patients with an inconclusive CCv4.0 diagnosis or systemic sclerosis were also described. Esophagogastric junction (EGJ) opening and the contractile response to distension (i.e. secondary peristalsis) were evaluated with 16-cm FLIP performed during sedated endoscopy and analyzed using a customize software program. HRM was classified according to CCv4.0. RESULTS: In the primary analysis, 156 patients (29%) had normal motility on FLIP Panometry, defined by normal EGJ opening (NEO) and a normal or borderline contractile response; 95% of these patients had normal motility or ineffective esophageal motility on HRM. 202 patients (37%) had obstruction with weak contractile response, defined as reduced EGJ opening and absent contractile response or impaired/disordered contractile response, on FLIP Panometry; 92% of these patients had a disorder of EGJ outflow per CCv4.0. CONCLUSIONS: Classifying esophageal motility in response to sustained distension with FLIP Panometry parallels the swallow-associated motility evaluation provided with HRM and CCv4.0. Thus, FLIP Panometry provides a well-tolerated method that can complement, or in some cases be an alternative to HRM, for evaluating esophageal motility disorders.
- Published
- 2021
50. Modelagem dinâmica e controle de aeronaves multirrotoras com configuração Tilt Rotor para transporte de líquidos
- Author
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Ivan Oliveira Tarifa, Finzi Neto, Roberto Mendes, Oliveira, Neusa Maria Franco, and Souza, Francisco José de
- Subjects
ENGENHARIAS::ENGENHARIA MECANICA [CNPQ] ,Aeronaves ,Fluido dinâmica ,FLIP ,Multirotor ,Engenharia Mecânica ,Tilt ,Pesticidas - Abstract
Pesquisa sem auxílio de agências de fomento O uso de aeronaves para aplicação de pesticidas está se tornando cada vez mais comum nos dias atuais, principalmente os multirrotores, em razão de sua precisão e versatilidade. A aplicação de defensı́vel agrı́cola pode ser representada por uma massa lı́quida que compõe grande parte do peso da aeronave, ocasionando uma variação do centro de massa durante o voo, assim como o efeito de sloshing . Estruturas poderem ser inseridas no recipiente para mitigar esses efeitos, no entanto, um controle robusto permite tanto a economia de espaço quanto a diminuição de custo. Assim, um dos objetivos deste trabalho foi o desenvolvimento de um modelo unificado de simulação de transporte de lı́quido em conjunto com a dinâmica de uma aeronave multirrotor através de códigos abertos de fácil uso, para possibilitar o desenvolvimento e testes de diferentes leis de controle. Além disso, utilizou-se tilts na aeronave multirrotor para investigar o seu efeito no transporte de carga lı́quida, juntamente com a influência do sloshing na dinâmica de voo da aeronave pela interação fluı́do estrutura. Este trabalho possui dois experimentos de simulação, sendo um, a comparação com resultados experimentais para uma caixa com fluı́do submetida a acelerações externas e o outro a comparação de controle da aeronave com e sem a caixa de fluı́do. No primeiro, foi observado que apesar de algumas simplificações feitas no modelo, os valores de pressão na parede se assemelham aos existentes experimentais. Para o segundo, foi realizado um experimento com entrada step, e nele foi possı́vel observar a influência do sloshing , na dinâmica de vôo da aeronave. The use of aircraft for pesticide application is becoming increasingly common nowadays, especi- ally with multirotors, due to their precision and versatility. The application of defensibles can be represented by a liquid mass that makes up a large part of the aircraft weight, making the center of mass change during flight, as well as creating the sloshing effect. Structures can be inserted into the container to mitigate these effects. However, robust controls can save space and money. Thus, one of the objectives of this work was the development of a unified model of simulation of liquid transport together with the dynamics of a multirotor aircraft through easy-to-use open codes, to enable the development and testing of different control laws. In addition, tilts were used in the multirotor aircraft to investigate their effect on liquid cargo transport, along with the influence of sloshing on the aircraft’s flight dynamics by fluid-structure interaction. This work has two simulation experiments: one being a comparison with experimental results for a box with fluid subjected to external accelerations and the other a comparison of aircraft control with and without the fluid box. In the first one, it was observed that despite some simplifications made in the model, the pressure values on the wall had similar behaviour to the existing experimental ones. For the second, an experiment with step input was carried out, and it was possible to observe the influence of sloshing on the aircraft’s flight dynamics as well as the tilts. Dissertação (Mestrado)
- Published
- 2022
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