13 results on '"Habibi, MS"'
Search Results
2. Prior COVID-19 protects against reinfection, even in the absence of detectable antibodies
- Author
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Breathnach, AS, Duncan, CJA, Bouzidi, KE, Hanrath, AT, Payne, BAI, Randell, PA, Habibi, MS, Riley, PA, Planche, TD, Busby, JS, Sudhanva, M, Pallett, SJC, and Kelleher, WP
- Published
- 2021
3. Detection of respiratory syncytial virus defective genomes in nasal secretions is associated with distinct clinical outcomes.
- Author
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Felt, SA, Sun, Y, Jozwik, A, Paras, A, Habibi, MS, Nickle, D, Anderson, L, Achouri, E, Feemster, KA, Cárdenas, AM, Turi, KN, Chang, M, Hartert, TV, Sengupta, S, Chiu, C, López, CB, Felt, SA, Sun, Y, Jozwik, A, Paras, A, Habibi, MS, Nickle, D, Anderson, L, Achouri, E, Feemster, KA, Cárdenas, AM, Turi, KN, Chang, M, Hartert, TV, Sengupta, S, Chiu, C, and López, CB
- Abstract
Respiratory syncytial virus (RSV) causes respiratory illness in children, immunosuppressed individuals and the elderly. However, the viral factors influencing the clinical outcome of RSV infections remain poorly defined. Defective viral genomes (DVGs) can suppress virus replication by competing for viral proteins and by stimulating antiviral immunity. We studied the association between detection of DVGs of the copy-back type and disease severity in three RSV A-confirmed cohorts. In hospitalized children, detection of DVGs in respiratory samples at or around the time of admission associated strongly with more severe disease, higher viral load and a stronger pro-inflammatory response. Interestingly, in experimentally infected adults, the presence of DVGs in respiratory secretions differentially associated with RSV disease severity depending on when DVGs were detected. Detection of DVGs early after infection associated with low viral loads and mild disease, whereas detection of DVGs late after infection, especially if DVGs were present for prolonged periods, associated with high viral loads and severe disease. Taken together, we demonstrate that the kinetics of DVG accumulation and duration could predict clinical outcome of RSV A infection in humans, and thus could be used as a prognostic tool to identify patients at risk of worse clinical disease.
- Published
- 2021
4. Progression of whole blood transcriptional signatures from interferon-induced to neutrophil-associated patterns in patients with severe influenza
- Author
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Dunning, J, Blankley, S, Hoang, LT, Cox, M, Graham, CM, James, PL, Bloom, CI, Chaussabel, D, Banchereau, J, Brett, SJ, Moffatt, MF, Habibi, MS, Johnston, SL, Hansel, TT, Levin, M, Thwaites, RS, Warner, JO, Cookson, WO, Gazzard, BG, Hay, A, McCauley, J, Aylin, P, Ashby, D, Barclay, WS, Elderfield, RA, Nadel, S, Herberg, JA, Drumright, LN, Garcia-Alvarez, L, Holmes, AH, Kon, OM, Aston, SJ, Gordon, SB, Hussell, T, Thompson, C, Zambon, MC, Baillie, KJ, Hume, DA, Simmonds, P, Hayward, A, Smyth, RL, McNamara, PS, Semple, MG, Nguyen-Van-Tam, JS, Ho, LP, McMichael, AJ, Kellam, P, Adamson, WE, Carman, WF, Griffiths, MJ, O'Garra, A, Openshaw, PJM, Wellcome Trust, National Institute for Health Research, Medical Research Council (MRC), and Asthma UK
- Subjects
0301 basic medicine ,Male ,Neutrophils ,Disease ,DISEASE ,Procalcitonin ,Transcriptome ,Pathogenesis ,0302 clinical medicine ,MARKERS ,Interferon ,Immunology and Allergy ,Medicine ,MOSAIC Investigators ,Young adult ,UNITED-KINGDOM ,Middle Aged ,3. Good health ,1107 Immunology ,030220 oncology & carcinogenesis ,Disease Progression ,Female ,Life Sciences & Biomedicine ,medicine.drug ,Adult ,Adolescent ,Immunology ,CIRCULATION ,BIOLOGY ,VIRUS-INFECTION ,Lung injury ,Antiviral Agents ,Article ,03 medical and health sciences ,Young Adult ,Influenza, Human ,Humans ,RNA, Messenger ,PROCALCITONIN ,METAANALYSIS ,Aged ,Science & Technology ,business.industry ,Human genetics ,030104 developmental biology ,Interferons ,business ,LUNG INJURY ,Biomarkers - Abstract
© 2018 The Author(s). Transcriptional profiles and host-response biomarkers are used increasingly to investigate the severity, subtype and pathogenesis of disease. We now describe whole-blood mRNA signatures and concentrations of local and systemic immunological mediators in 131 adults hospitalized with influenza, from whom extensive clinical and investigational data were obtained by MOSAIC investigators. Signatures reflective of interferon-related antiviral pathways were common up to day 4 of symptoms in patients who did not require mechanical ventilator support; in those who needed mechanical ventilation, an inflammatory, activated-neutrophil and cell-stress or death ('bacterial') pattern was seen, even early in disease. Identifiable bacterial co-infection was not necessary for this 'bacterial' signature but was able to enhance its development while attenuating the early 'viral' signature. Our findings emphasize the importance of timing and severity in the interpretation of host responses to acute viral infection and identify specific patterns of immune-system activation that might enable the development of novel diagnostic and therapeutic tools for severe influenza.
- Published
- 2018
5. Erratum: RSV-specific airway resident memory CD8+ T cells and differential disease severity after experimental human infection.
- Author
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Jozwik, A, Habibi, MS, Paras, A, Zhu, J, Guvenel, A, Dhariwal, J, Almond, M, Wong, EHC, Sykes, A, Maybeno, M, Del Rosario, J, Trujillo-Torralbo, M-B, Mallia, P, Sidney, J, Peters, B, Kon, OM, Sette, A, Johnston, SL, Openshaw, PJ, Chiu, C, Jozwik, A, Habibi, MS, Paras, A, Zhu, J, Guvenel, A, Dhariwal, J, Almond, M, Wong, EHC, Sykes, A, Maybeno, M, Del Rosario, J, Trujillo-Torralbo, M-B, Mallia, P, Sidney, J, Peters, B, Kon, OM, Sette, A, Johnston, SL, Openshaw, PJ, and Chiu, C
- Abstract
Nature Communications 6: Article number: 10224 (2015); Published: 21 December 2015; Updated: 9 March 2016 In Fig. 5 of this article, the three dot plots in the first row of panel a contain black numerical labels that are incorrect, and light blue labels that are correct. A revised version of Fig. 5,with correct labels in black throughout, appears below.
- Published
- 2016
6. IFITM3 restricts the morbidity and mortality associated with influenza
- Author
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Everitt, AR, Clare, S, Pertel, T, John, SP, Wash, RS, Smith, SE, Chin, CR, Feeley, EM, Sims, JS, Adams, DJ, Wise, HM, Kane, L, Goulding, D, Digard, P, Anttila, V, Baillie, JK, Walsh, TS, Hume, DA, Palotie, A, Xue, Y, Colonna, V, Tyler-Smith, C, Dunning, J, Gordon, SB, Everingham, K, Dawson, H, Hope, D, Ramsay, P, Walsh Local Lead Investigator, TS, Campbell, A, Kerr, S, Harrison, D, Rowan, K, Addison, J, Donald, N, Galt, S, Noble, D, Taylor, J, Webster Local Lead Investigator, N, Taylor Local Lead Investigator, I, Aldridge Local Lead Investigator, J, Dornan, R, Richard, C, Gilmour, D, Simmons Local Lead Investigator, R, White Local Lead Investigator, R, Jardine, C, Williams Local Lead Investigator, D, Booth Local Lead Investigator, M, Quasim, T, Watson, V, Henry, P, Munro, F, Bell, L, Ruddy Local Lead Investigator, J, Cole Local Lead Investigator, S, Southward, J, Allcoat, P, Gray, S, McDougall Local Lead Investigator, M, Matheson, J, Whiteside Local Lead Investigator, J, Alcorn, D, Rooney Local Lead Investigator, K, Sundaram, R, Imrie Local Lead Investigator, G, Bruce, J, McGuigan, K, Moultrie Local Lead Investigator, S, Cairns Local Lead Investigator, C, Grant, J, Hughes, M, Murdoch Local Lead Investigator, C, Davidson Local Lead Investigator, A, Harris, G, Paterson, R, Wallis Local Lead Investigator, C, Binning Local Lead Investigator, S, Pollock, M, Antonelli, J, Duncan, A, Gibson, J, McCulloch, C, Murphy, L, Haley, C, Faulkner, G, Freeman, T, Baillie Principal Investigator, JK, Chaussabel, D, Adamson, WE, Carman, WF, Thompson, C, Zambon, MC, Aylin, P, Ashby, D, Barclay, WS, Brett, SJ, Cookson, WO, Drumright, LN, Elderfield, RA, Garcia-Alvarez, L, Gazzard, BG, Griffiths, MJ, Habibi, MS, Hansel, TT, Herberg, JA, Holmes, AH, Hussell, T, Johnston, SL, Kon, OM, Levin, M, Moffatt, MF, Nadel, S, Openshaw, PJ, Warner, JO, Aston, SJ, Hay, A, McCauley, J, O'Garra, A, Banchereau, J, Hayward, A, Kellam, P, Simmonds, P, McNamara, PS, Semple, MG, Smyth, RL, Nguyen-Van-Tam, JS, Ho, L-P, Mcmichael, AJ, Dougan, G, and Brass, AL
- Published
- 2012
7. RSV-specific airway resident memory CD8+ T cells and differential disease severity after experimental human infection.
- Author
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Jozwik, A, Habibi, MS, Paras, A, Zhu, J, Guvenel, A, Dhariwal, J, Almond, M, Wong, EHC, Sykes, A, Maybeno, M, Del Rosario, J, Trujillo-Torralbo, M-B, Mallia, P, Sidney, J, Peters, B, Kon, OM, Sette, A, Johnston, SL, Openshaw, PJ, Chiu, C, Jozwik, A, Habibi, MS, Paras, A, Zhu, J, Guvenel, A, Dhariwal, J, Almond, M, Wong, EHC, Sykes, A, Maybeno, M, Del Rosario, J, Trujillo-Torralbo, M-B, Mallia, P, Sidney, J, Peters, B, Kon, OM, Sette, A, Johnston, SL, Openshaw, PJ, and Chiu, C
- Abstract
In animal models, resident memory CD8+ T (Trm) cells assist in respiratory virus elimination but their importance in man has not been determined. Here, using experimental human respiratory syncytial virus (RSV) infection, we investigate systemic and local virus-specific CD8+ T-cell responses in adult volunteers. Having defined the immunodominance hierarchy, we analyse phenotype and function longitudinally in blood and by serial bronchoscopy. Despite rapid clinical recovery, we note surprisingly extensive lower airway inflammation with persistent viral antigen and cellular infiltrates. Pulmonary virus-specific CD8+ T cells display a CD69+CD103+ Trm phenotype and accumulate to strikingly high frequencies into convalescence without continued proliferation. While these have a more highly differentiated phenotype, they express fewer cytotoxicity markers than in blood. Nevertheless, their abundance before infection correlates with reduced symptoms and viral load, implying that CD8+ Trm cells in the human lung can confer protection against severe respiratory viral disease when humoral immunity is overcome.
- Published
- 2015
8. Resilience of the respiratory microbiome in controlled adult RSV challenge study.
- Author
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Cuthbertson L, James P, Habibi MS, Thwaites RS, Paras A, Chiu C, Openshaw PJM, Cookson WOC, and Moffatt MF
- Subjects
- Adult, Animals, Humans, Lung, Mice, Mice, Inbred BALB C, Respiratory System, Microbiota, Respiratory Syncytial Virus Infections, Respiratory Syncytial Virus, Human
- Abstract
Competing Interests: Conflict of interest: L. Cuthbertson has nothing to disclose. Conflict of interest: P. James has nothing to disclose. Conflict of interest: M.S. Habibi has nothing to disclose. Conflict of interest: R.S. Thwaites has nothing to disclose. Conflict of interest: A. Paras has nothing to disclose. Conflict of interest: C. Chiu has nothing to disclose. Conflict of interest: P.J.M. Openshaw has nothing to disclose. Conflict of interest: W.O.C. Cookson has nothing to disclose. Conflict of interest: M.F. Moffatt has nothing to disclose.
- Published
- 2021
- Full Text
- View/download PDF
9. Epitope-specific airway-resident CD4+ T cell dynamics during experimental human RSV infection.
- Author
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Guvenel A, Jozwik A, Ascough S, Ung SK, Paterson S, Kalyan M, Gardener Z, Bergstrom E, Kar S, Habibi MS, Paras A, Zhu J, Park M, Dhariwal J, Almond M, Wong EH, Sykes A, Del Rosario J, Trujillo-Torralbo MB, Mallia P, Sidney J, Peters B, Kon OM, Sette A, Johnston SL, Openshaw PJ, and Chiu C
- Subjects
- Adolescent, Adult, CD4-Positive T-Lymphocytes pathology, Epitopes, T-Lymphocyte, Female, Humans, Male, Middle Aged, Respiratory Syncytial Virus Infections pathology, CD4-Positive T-Lymphocytes immunology, Epitope Mapping, Respiratory Syncytial Virus Infections immunology, Respiratory Syncytial Viruses immunology
- Abstract
BACKGROUNDRespiratory syncytial virus (RSV) is an important cause of acute pulmonary disease and one of the last remaining major infections of childhood for which there is no vaccine. CD4+ T cells play a key role in antiviral immunity, but they have been little studied in the human lung.METHODSHealthy adult volunteers were inoculated i.n. with RSV A Memphis 37. CD4+ T cells in blood and the lower airway were analyzed by flow cytometry and immunohistochemistry. Bronchial soluble mediators were measured using quantitative PCR and MesoScale Discovery. Epitope mapping was performed by IFN-γ ELISpot screening, confirmed by in vitro MHC binding.RESULTSActivated CD4+ T cell frequencies in bronchoalveolar lavage correlated strongly with local C-X-C motif chemokine 10 levels. Thirty-nine epitopes were identified, predominantly toward the 3' end of the viral genome. Five novel MHC II tetramers were made using an immunodominant EFYQSTCSAVSKGYL (F-EFY) epitope restricted to HLA-DR4, -DR9, and -DR11 (combined allelic frequency: 15% in Europeans) and G-DDF restricted to HLA-DPA1*01:03/DPB1*02:01 and -DPA1*01:03/DPB1*04:01 (allelic frequency: 55%). Tetramer labeling revealed enrichment of resident memory CD4+ T (Trm) cells in the lower airway; these Trm cells displayed progressive differentiation, downregulation of costimulatory molecules, and elevated CXCR3 expression as infection evolved.CONCLUSIONSHuman infection challenge provides a unique opportunity to study the breadth of specificity and dynamics of RSV-specific T-cell responses in the target organ, allowing the precise investigation of Trm recognizing novel viral antigens over time. The new tools that we describe enable precise tracking of RSV-specific CD4+ cells, potentially accelerating the development of effective vaccines.TRIAL REGISTRATIONClinicalTrials.gov NCT02755948.FUNDINGMedical Research Council, Wellcome Trust, National Institute for Health Research.
- Published
- 2020
- Full Text
- View/download PDF
10. Encephalomyelitis with Retinopathy in Common Variable Immunodeficiency (CVID).
- Author
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Shribman SE, Katanga J, Ali N, Hayman GR, Bridges LR, Habibi MS, Mackinnon AD, and Nitkunan A
- Abstract
Common variable immunodeficiency is the most common primary immunodeficiency and rarely causes neurological manifestations since the introduction of IVIg, but here, the authors present a case of a 31-year-old Afro-Caribbean man who after short non-adherence to his immunoglobulins, develops encephalomyelitis with retinopathy. To the authors' knowledge, this is the first case presented with retinal photographs, OCT, CT, MRI and brain biopsies., (© 2018 Taylor & Francis Group, LLC.)
- Published
- 2018
- Full Text
- View/download PDF
11. Erratum: RSV-specific airway resident memory CD8+ T cells and differential disease severity after experimental human infection.
- Author
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Jozwik A, Habibi MS, Paras A, Zhu J, Guvenel A, Dhariwal J, Almond M, Wong EH, Sykes A, Maybeno M, Del Rosario J, Trujillo-Torralbo MB, Mallia P, Sidney J, Peters B, Kon OM, Sette A, Johnston SL, Openshaw PJ, and Chiu C
- Published
- 2016
- Full Text
- View/download PDF
12. RSV-specific airway resident memory CD8+ T cells and differential disease severity after experimental human infection.
- Author
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Jozwik A, Habibi MS, Paras A, Zhu J, Guvenel A, Dhariwal J, Almond M, Wong EHC, Sykes A, Maybeno M, Del Rosario J, Trujillo-Torralbo MB, Mallia P, Sidney J, Peters B, Kon OM, Sette A, Johnston SL, Openshaw PJ, and Chiu C
- Subjects
- Adolescent, Adult, Animals, Cell Differentiation, Female, Humans, Lung cytology, Lung immunology, Lung virology, Male, Mice, Middle Aged, Respiratory Syncytial Virus Infections physiopathology, Respiratory Syncytial Virus Infections virology, Respiratory Syncytial Viruses genetics, Respiratory Syncytial Viruses immunology, Respiratory Syncytial Viruses physiology, Young Adult, CD8-Positive T-Lymphocytes cytology, CD8-Positive T-Lymphocytes immunology, Immunologic Memory, Respiratory Syncytial Virus Infections immunology
- Abstract
In animal models, resident memory CD8+ T (Trm) cells assist in respiratory virus elimination but their importance in man has not been determined. Here, using experimental human respiratory syncytial virus (RSV) infection, we investigate systemic and local virus-specific CD8+ T-cell responses in adult volunteers. Having defined the immunodominance hierarchy, we analyse phenotype and function longitudinally in blood and by serial bronchoscopy. Despite rapid clinical recovery, we note surprisingly extensive lower airway inflammation with persistent viral antigen and cellular infiltrates. Pulmonary virus-specific CD8+ T cells display a CD69+CD103+ Trm phenotype and accumulate to strikingly high frequencies into convalescence without continued proliferation. While these have a more highly differentiated phenotype, they express fewer cytotoxicity markers than in blood. Nevertheless, their abundance before infection correlates with reduced symptoms and viral load, implying that CD8+ Trm cells in the human lung can confer protection against severe respiratory viral disease when humoral immunity is overcome.
- Published
- 2015
- Full Text
- View/download PDF
13. Impaired Antibody-mediated Protection and Defective IgA B-Cell Memory in Experimental Infection of Adults with Respiratory Syncytial Virus.
- Author
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Habibi MS, Jozwik A, Makris S, Dunning J, Paras A, DeVincenzo JP, de Haan CA, Wrammert J, Openshaw PJ, and Chiu C
- Subjects
- Adolescent, Adult, Female, Humans, Male, Middle Aged, Young Adult, Antibodies, Viral immunology, B-Lymphocytes immunology, Immunoglobulin A immunology, Immunologic Memory, Respiratory Syncytial Virus Infections immunology, Respiratory Syncytial Viruses immunology
- Abstract
Rationale: Despite relative antigenic stability, respiratory syncytial virus (RSV) reinfects throughout life. After more than 40 years of research, no effective human vaccine exists and correlates of protection remain poorly defined. Most current vaccine candidates seek to induce high levels of RSV-specific serum neutralizing antibodies, which are associated with reduced RSV-related hospitalization rates in observational studies but may not actually prevent infection., Objectives: To characterize correlates of protection from infection and the generation of RSV-specific humoral memory to promote effective vaccine development., Methods: We inoculated 61 healthy adults with live RSV and studied protection from infection by serum and mucosal antibody. We analyzed RSV-specific peripheral blood plasmablast and memory B-cell frequencies and antibody longevity., Measurements and Main Results: Despite moderately high levels of preexisting serum antibody, 34 (56%) became infected, of whom 23 (68%) developed symptomatic colds. Prior RSV-specific nasal IgA correlated significantly more strongly with protection from polymerase chain reaction-confirmed infection than serum neutralizing antibody. Increases in virus-specific antibody titers were variable and transient in infected subjects but correlated with plasmablasts that peaked around Day 10. During convalescence, only IgG (and no IgA) RSV-specific memory B cells were detectable in peripheral blood. This contrasted with natural influenza infection, in which virus-specific IgA memory B cells were readily recovered., Conclusions: This observed specific defect in IgA memory may partly explain the ability of RSV to cause recurrent symptomatic infections. If so, vaccines able to induce durable RSV-specific IgA responses may be more protective than those generating systemic antibody alone.
- Published
- 2015
- Full Text
- View/download PDF
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